BLASTX 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2X-9R
         (585 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           369,800 sequences; 113,023,754 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|722345 (U22357) runt [Drosophila pseudoobscura]                     32  3.3
gi|4049878 (AF063866) ORF MSV035 hypothetical protein [Melanoplu...    32  3.3


>gi|722345 (U22357) runt [Drosophila pseudoobscura]
           Length = 561
           
 Score = 32.1 bits (71), Expect = 3.3
 Identities = 14/52 (26%), Positives = 26/52 (49%)

Query: 471 NTINESITIGNLLENLISYFAKYHEILSSXLXXIYNIMEKYHGEYGKIGDPN 316
           NT N +   G+   N  S  AK    ++     ++ ++++YHGE  + G P+
Sbjct: 88  NTANNTANNGSSNSNSNSNSAKMPSSMTDMFASLHEMLQEYHGELAQTGSPS 139



>gi|4049878 (AF063866) ORF MSV035 hypothetical protein [Melanoplus sanguinipes
           entomopoxvirus]
           Length = 439
           
 Score = 32.1 bits (71), Expect = 3.3
 Identities = 42/159 (26%), Positives = 65/159 (40%), Gaps = 7/159 (4%)

Query: 477 YGNTINESITIGNLLENLISYFAKYHEILSSXLXXIYNIMEKYHGEYGKIGDPNKITIED 298
           Y N INE I   ++  N + Y      I+   +  IY I EKY  EY  I   N +  ++
Sbjct: 303 YKNIINEYINNNDI--NRLLYIIN---IIQLPINTIYVIFEKYKNEYNII--LNLLLYQN 355

Query: 297 F-------YYPSRPGGHLIFEKFCEESDKYIVPISILLXXIETTXIYTQILGYXLIKIRA 139
                   YY        I+E F +  D   + I+IL    +   I+  IL Y L  I  
Sbjct: 356 IIPKMFNKYY------KYIYEIFLKNIDNECI-INILYNKYKNYKIFNNILKYILENINT 408

Query: 138 YSNIGSVSHLHNSLEMNITNTFVQTIQIXTKIAALSVNMQSKHFEF 1
           Y                        +++ T I  ++VN++ KH+E+
Sbjct: 409 Y------------------------VKLYTLI--MNVNLKQKHYEY 428


  Database: Non-redundant GenBank CDS
  translations+PDB+SwissProt+SPupdate+PIR
    Posted date:  Apr 17, 1999  5:33 AM
  Number of letters in database: 113,023,754
  Number of sequences in database:  369,800
  
Lambda     K      H
   0.318    0.135     0.00 

Gapped
Lambda     K      H
   0.270   0.0470 4.94e-324 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104120310
Number of Sequences: 369800
Number of extensions: 2006665
Number of successful extensions: 4233
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4232
Number of HSP's gapped (non-prelim): 2
length of query: 195
length of database: 113023754
effective HSP length: 53
effective length of query: 141
effective length of database: 93424354
effective search space: 13172833914
effective search space used: 13172833914
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 67 (30.5 bits)