BLASTX 2.0.8 [Jan-05-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 14VII57R
(631 letters)
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
368,476 sequences; 112,640,273 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|2285875|dbj|BAA21652| (D85682) synaptojanin [Bos taurus] 62 3e-09
gi|2702323 (AF009040) synaptojanin [Homo sapiens] >gi|4507335|re... 62 3e-09
gi|2702321 (AF009039) synaptojanin [Homo sapiens] 62 3e-09
gi|4240309|dbj|BAA74933| (AB020717) KIAA0910 protein [Homo sapiens] 62 3e-09
gi|1586823|prf||2204390A synaptojanin [Rattus norvegicus] 62 4e-09
gi|1166575 (U45479) synaptojanin [Rattus norvegicus] 62 4e-09
gi|2132889|pir||S61667 probable membrane protein YOR109w - yeast... 60 1e-08
gi|929847|emb|CAA90520| (Z50161) ORF N2160 [Saccharomyces cerevi... 60 2e-08
gi|1730760|sp|P50942|YNK6_YEAST HYPOTHETICAL 133.3 KD PROTEIN IN... 60 2e-08
gi|2956769|emb|CAA17882| (AL022103) hypothetical protein [Schizo... 60 2e-08
gi|3478621 (AF026123) synaptojanin 2 [Mus musculus] 59 4e-08
gi|2708493 (U90312) synaptojanin II [Rattus norvegicus] 59 4e-08
gi|4104822 (AF039945) synaptojanin 2B [Homo sapiens] 56 3e-07
gi|3241995 (AF041862) synaptojanin 2 isoform alpha [Mus musculus] 55 3e-07
gi|3241985 (AF041857) synaptojanin 2 isoform beta [Mus musculus] 55 3e-07
gi|417726|sp|P32368|RSD1_YEAST RECESSIVE SUPPRESSOR OF SECRETORY... 52 5e-06
gi|3876550|emb|CAB03020| (Z81072) predicted using Genefinder; Si... 52 5e-06
gi|3287695 (AC003979) Similar to hypothetical protein C34B7.2 gb... 49 2e-05
gi|4240191|dbj|BAA74874| (AB020658) KIAA0851 protein [Homo sapiens] 49 2e-05
gi|3080522|emb|CAA18651| (AL022599) hypothetical protein [Schizo... 48 6e-05
gi|1657619 (U72504) G5p [Arabidopsis thaliana] >gi|3068710 (AF04... 45 5e-04
gi|731772|sp|P40559|YIA2_YEAST HYPOTHETICAL 108.4 KD PROTEIN IN ... 44 8e-04
gi|3874654|emb|CAB05701| (Z83220) Similarity to Yeast hypothetic... 43 0.001
gi|2497367|sp|Q92562|Y274_HUMAN HYPOTHETICAL PROTEIN KIAA0274 >g... 41 0.007
gi|2462676|emb|CAB16732| (Z99568) hypothetical protein. [Schizos... 40 0.016
gi|1176581|sp|P42837|YN65_YEAST HYPOTHETICAL 101.7 KD PROTEIN IN... 36 0.24
gi|1075482|pir||S52462 hypothetical protein 526 - Coxiella burne... 32 2.7
>gi|2285875|dbj|BAA21652| (D85682) synaptojanin [Bos taurus]
Length = 1212
Score = 62.5 bits (149), Expect = 3e-09
Identities = 52/158 (32%), Positives = 88/158 (54%), Gaps = 33/158 (20%)
Query: 148 IKKFIENHNFYVS--------------HKKIE----DDRFIWNTNMIN-------NNIST 252
++K + + NFY + H+ ++ D+RF WN ++ N
Sbjct: 119 VRKVLNSGNFYFAWSASGVSLDLSLNAHRSLQEHTTDNRFSWNQSLHLHLKHYGVNCADW 178
Query: 253 QIYLFCGYINSKVSY----RYTTTILSFISKNRIGPRFICRGVDDDGNSSFFVKTICQVK 420
+ L CG + + Y + ++S +S R G RF RG +DDG+ + FV+T QV
Sbjct: 179 LLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETE-QVV 237
Query: 421 RDDEIINEKILYRGSIPVYWEQK----LSLRQEIKIYDKEHKIPFKKHFKVLQRENKTIF 588
D+ ++ I RGS+P++WEQ S R + + + F +HF+ L+
Sbjct: 238 YLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGKQI 297
Query: 589 VINLLSSKINE 621
++NLL SK E
Sbjct: 298 IVNLLGSKEGE 308
>gi|2702323 (AF009040) synaptojanin [Homo sapiens]
>gi|4507335|ref|NP_003886.1|pSYNJ1| UNKNOWN
Length = 1575
Score = 62.1 bits (148), Expect = 3e-09
Identities = 52/158 (32%), Positives = 88/158 (54%), Gaps = 33/158 (20%)
Query: 148 IKKFIENHNFYVS--------------HKKIE----DDRFIWNTNMIN-------NNIST 252
++K + + NFY + H+ ++ D+RF WN ++ N
Sbjct: 119 VRKVLNSGNFYFAWSASGISLDLSLNAHRSMQEQTTDNRFFWNQSLHLHLKHYGVNCDDW 178
Query: 253 QIYLFCGYINSKVSY----RYTTTILSFISKNRIGPRFICRGVDDDGNSSFFVKTICQVK 420
+ L CG + + Y + ++S +S R G RF RG +DDG+ + FV+T QV
Sbjct: 179 LLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETE-QVV 237
Query: 421 RDDEIINEKILYRGSIPVYWEQK----LSLRQEIKIYDKEHKIPFKKHFKVLQRENKTIF 588
D+ ++ I RGS+P++WEQ S R + + + F +HF+ L+
Sbjct: 238 YLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGRQI 297
Query: 589 VINLLSSKINE 621
++NLL SK E
Sbjct: 298 IVNLLGSKEGE 308
>gi|2702321 (AF009039) synaptojanin [Homo sapiens]
Length = 1311
Score = 62.1 bits (148), Expect = 3e-09
Identities = 52/158 (32%), Positives = 88/158 (54%), Gaps = 33/158 (20%)
Query: 148 IKKFIENHNFYVS--------------HKKIE----DDRFIWNTNMIN-------NNIST 252
++K + + NFY + H+ ++ D+RF WN ++ N
Sbjct: 119 VRKVLNSGNFYFAWSASGISLDLSLNAHRSMQEQTTDNRFFWNQSLHLHLKHYGVNCDDW 178
Query: 253 QIYLFCGYINSKVSY----RYTTTILSFISKNRIGPRFICRGVDDDGNSSFFVKTICQVK 420
+ L CG + + Y + ++S +S R G RF RG +DDG+ + FV+T QV
Sbjct: 179 LLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETE-QVV 237
Query: 421 RDDEIINEKILYRGSIPVYWEQK----LSLRQEIKIYDKEHKIPFKKHFKVLQRENKTIF 588
D+ ++ I RGS+P++WEQ S R + + + F +HF+ L+
Sbjct: 238 YLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGRQI 297
Query: 589 VINLLSSKINE 621
++NLL SK E
Sbjct: 298 IVNLLGSKEGE 308
>gi|4240309|dbj|BAA74933| (AB020717) KIAA0910 protein [Homo sapiens]
Length = 1193
Score = 62.1 bits (148), Expect = 3e-09
Identities = 52/158 (32%), Positives = 88/158 (54%), Gaps = 33/158 (20%)
Query: 148 IKKFIENHNFYVS--------------HKKIE----DDRFIWNTNMIN-------NNIST 252
++K + + NFY + H+ ++ D+RF WN ++ N
Sbjct: 33 VRKVLNSGNFYFAWSASGISLDLSLNAHRSMQEQTTDNRFFWNQSLHLHLKHYGVNCDDW 92
Query: 253 QIYLFCGYINSKVSY----RYTTTILSFISKNRIGPRFICRGVDDDGNSSFFVKTICQVK 420
+ L CG + + Y + ++S +S R G RF RG +DDG+ + FV+T QV
Sbjct: 93 LLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETE-QVV 151
Query: 421 RDDEIINEKILYRGSIPVYWEQK----LSLRQEIKIYDKEHKIPFKKHFKVLQRENKTIF 588
D+ ++ I RGS+P++WEQ S R + + + F +HF+ L+
Sbjct: 152 YLDDSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGKQI 211
Query: 589 VINLLSSKINE 621
++NLL SK E
Sbjct: 212 IVNLLGSKEGE 222
>gi|1586823|prf||2204390A synaptojanin [Rattus norvegicus]
Length = 1558
Score = 61.7 bits (147), Expect = 4e-09
Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 33/158 (20%)
Query: 148 IKKFIENHNFYVS--------------HKKIE----DDRFIWNTNMIN-------NNIST 252
++K + + NFY + H+ ++ D+RF WN ++ N
Sbjct: 119 VRKVLNSGNFYFAWSASGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDW 178
Query: 253 QIYLFCGYINSKVSY----RYTTTILSFISKNRIGPRFICRGVDDDGNSSFFVKTICQVK 420
+ L CG + + Y + ++S +S R G RF RG +DDG+ + FV+T QV
Sbjct: 179 LLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETE-QVI 237
Query: 421 RDDEIINEKILYRGSIPVYWEQK----LSLRQEIKIYDKEHKIPFKKHFKVLQRENKTIF 588
D+ ++ I RGS+P++WEQ S R + + + F +HF+ L+
Sbjct: 238 YLDDCVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKDLYGKQI 297
Query: 589 VINLLSSKINE 621
V+NLL SK E
Sbjct: 298 VVNLLGSKEGE 308
>gi|1166575 (U45479) synaptojanin [Rattus norvegicus]
Length = 1292
Score = 61.7 bits (147), Expect = 4e-09
Identities = 53/158 (33%), Positives = 88/158 (55%), Gaps = 33/158 (20%)
Query: 148 IKKFIENHNFYVS--------------HKKIE----DDRFIWNTNMIN-------NNIST 252
++K + + NFY + H+ ++ D+RF WN ++ N
Sbjct: 119 VRKVLNSGNFYFAWSASGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDW 178
Query: 253 QIYLFCGYINSKVSY----RYTTTILSFISKNRIGPRFICRGVDDDGNSSFFVKTICQVK 420
+ L CG + + Y + ++S +S R G RF RG +DDG+ + FV+T QV
Sbjct: 179 LLRLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETE-QVI 237
Query: 421 RDDEIINEKILYRGSIPVYWEQK----LSLRQEIKIYDKEHKIPFKKHFKVLQRENKTIF 588
D+ ++ I RGS+P++WEQ S R + + + F +HF+ L+
Sbjct: 238 YLDDCVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKDLYGKQI 297
Query: 589 VINLLSSKINE 621
V+NLL SK E
Sbjct: 298 VVNLLGSKEGE 308
>gi|2132889|pir||S61667 probable membrane protein YOR109w - yeast (Saccharomyces
cerevisiae) >gi|1164954|emb|CAA64029| (X94335) YOR3231w
[Saccharomyces cerevisiae] >gi|1420295|emb|CAA99307|
(Z75017) ORF YOR109w [Saccharomyces cerevisiae]
Length = 1107
Score = 60.1 bits (143), Expect = 1e-08
Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 27/154 (17%)
Query: 169 HNFYVSHKKIED---DRFIWNTNMINNNISTQIYL-----------------FCGYINSK 288
H Y H D + ++WN+ ++ I+ + +L G+ +
Sbjct: 165 HRGYGQHSLSTDTYEEEYMWNSFLMQEMITYRDHLDTNLKQILDDEGFLTTVIRGFAETF 224
Query: 289 VSY----RYTTTILSFISKNRIGPRFICRGVDDDGNSSFFVKTICQVKRDDEIINEKILY 456
VSY + TI+S S R G RF RGVDD+ N + FV+T + +
Sbjct: 225 VSYVKKLKVALTIISKQSWKRAGTRFNARGVDDEANVANFVETEF-IMYSSQYCYAFTQI 283
Query: 457 RGSIPVYWEQKLSL---RQEIKIYDKEHKIPFKKHFKVLQRENKTIFVINLLSSKINELX 627
RGSIPV+WEQ SL R +I + + F KH + + V+NLLS+K +E+
Sbjct: 284 RGSIPVFWEQGTSLINPRVQITRSFEATQPVFDKHIMKSVEKYGPVHVVNLLSTKSSEIE 343
Query: 628 L 630
L
Sbjct: 344 L 344
>gi|929847|emb|CAA90520| (Z50161) ORF N2160 [Saccharomyces cerevisiae]
Length = 1102
Score = 59.7 bits (142), Expect = 2e-08
Identities = 39/107 (36%), Positives = 61/107 (56%), Gaps = 3/107 (2%)
Query: 310 TILSFISKNRIGPRFICRGVDDDGNSSFFVKTICQVKRDDEIINEKILYRGSIPVYWEQK 489
TI+S S R G RF RG+DDDG+ + FV+T + + RGS+P++WEQ
Sbjct: 261 TIISRQSWKRAGTRFNARGIDDDGHVANFVETE-MIMYSSQYCYAFTQIRGSLPIFWEQD 319
Query: 490 LSL---RQEIKIYDKEHKIPFKKHFKVLQRENKTIFVINLLSSKINELXL 630
SL + +I + + F +HF L ++ + +INLLS+K +E+ L
Sbjct: 320 TSLISPKIQITRSVEATQPTFDEHFIRLFKKYGPVHIINLLSTKSSEIQL 369
>gi|1730760|sp|P50942|YNK6_YEAST HYPOTHETICAL 133.3 KD PROTEIN IN CYB5-LEU4 INTERGENIC REGION
>gi|2132747|pir||S63046 probable membrane protein
YNL106c - yeast (Saccharomyces cerevisiae)
>gi|1302022|emb|CAA95982| (Z71382) ORF YNL106c
[Saccharomyces cerevisiae]
Length = 1183
Score = 59.7 bits (142), Expect = 2e-08
Identities = 39/107 (36%), Positives = 61/107 (56%), Gaps = 3/107 (2%)
Query: 310 TILSFISKNRIGPRFICRGVDDDGNSSFFVKTICQVKRDDEIINEKILYRGSIPVYWEQK 489
TI+S S R G RF RG+DDDG+ + FV+T + + RGS+P++WEQ
Sbjct: 261 TIISRQSWKRAGTRFNARGIDDDGHVANFVETE-MIMYSSQYCYAFTQIRGSLPIFWEQD 319
Query: 490 LSL---RQEIKIYDKEHKIPFKKHFKVLQRENKTIFVINLLSSKINELXL 630
SL + +I + + F +HF L ++ + +INLLS+K +E+ L
Sbjct: 320 TSLISPKIQITRSVEATQPTFDEHFIRLFKKYGPVHIINLLSTKSSEIQL 369
>gi|2956769|emb|CAA17882| (AL022103) hypothetical protein [Schizosaccharomyces pombe]
Length = 1076
Score = 59.7 bits (142), Expect = 2e-08
Identities = 38/107 (35%), Positives = 59/107 (54%), Gaps = 4/107 (3%)
Query: 310 TILSFISKNRIGPRFICRGVDDDGNSSFFVKTICQVKRDDEIINEKILYRGSIPVYWEQK 489
+++S +S R G RF+ RGVDDDGN + FV+T + ++ RGSIP++WEQ+
Sbjct: 239 SLISRLSSLRAGTRFLSRGVDDDGNVANFVETETILDSSKYCVS-YCQVRGSIPIFWEQE 297
Query: 490 ----LSLRQEIKIYDKEHKIPFKKHFKVLQRENKTIFVINLLSSKINELXL 630
+ +I + + F+KHF L E + +INLL + E L
Sbjct: 298 GVQMFGQKIDITRSLEATRAAFEKHFTSLIEEYGPVHIINLLGTGSGERSL 348
>gi|3478621 (AF026123) synaptojanin 2 [Mus musculus]
Length = 1206
Score = 58.6 bits (139), Expect = 4e-08
Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 12/120 (10%)
Query: 262 LFCGYINSKVSY----RYTTTILSFISKNRIGPRFICRGVDDDGNSSFFVKTICQVKRDD 429
+ CG + + Y + ++S IS R G RF+ RGV+DDG+ S FV+T + DD
Sbjct: 142 VICGVVTIRTVYASHKQAKACLISRISCERAGARFLTRGVNDDGHVSNFVETEQAIYMDD 201
Query: 430 EIINEKILYRGSIPVYWEQ--------KLSLRQEIKIYDKEHKIPFKKHFKVLQRENKTI 585
++ + RGS+P++WEQ L L + + + + F++H +L+ +
Sbjct: 202 G-VSSFVQIRGSVPLFWEQPGLQVGSHHLRLHRGL----EANAPAFERHMVLLKEQYGQQ 256
Query: 586 FVINLLSSKINE 621
V+NLL S+ E
Sbjct: 257 VVVNLLGSRGGE 268
>gi|2708493 (U90312) synaptojanin II [Rattus norvegicus]
Length = 1248
Score = 58.6 bits (139), Expect = 4e-08
Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 12/120 (10%)
Query: 262 LFCGYINSKVSY----RYTTTILSFISKNRIGPRFICRGVDDDGNSSFFVKTICQVKRDD 429
+ CG + + Y + ++S IS R G RF+ RGV+DDG+ S FV+T + DD
Sbjct: 184 VICGVVTIRTVYASHKQAKACLISRISCERAGARFLTRGVNDDGHVSNFVETEQAIYMDD 243
Query: 430 EIINEKILYRGSIPVYWEQ--------KLSLRQEIKIYDKEHKIPFKKHFKVLQRENKTI 585
++ + RGS+P++WEQ L L + + + + F++H +L+ +
Sbjct: 244 G-VSSFVQIRGSVPLFWEQPGLQVGSHHLRLHRGL----EANAPAFERHMVLLKEQYGQQ 298
Query: 586 FVINLLSSKINE 621
V+NLL S+ E
Sbjct: 299 VVVNLLGSRGGE 310
>gi|4104822 (AF039945) synaptojanin 2B [Homo sapiens]
Length = 1443
Score = 55.8 bits (132), Expect = 3e-07
Identities = 39/120 (32%), Positives = 66/120 (54%), Gaps = 12/120 (10%)
Query: 262 LFCGYINSKVSY----RYTTTILSFISKNRIGPRFICRGVDDDGNSSFFVKTICQVKRDD 429
+ CG + + Y + ++S +S R G RF RGV+DDG+ S FV+T + DD
Sbjct: 131 IICGVVTIRTVYASHKQAKACLVSRVSCERTGTRFHTRGVNDDGHVSNFVETEQMIYMDD 190
Query: 430 EIINEKILYRGSIPVYWEQ--------KLSLRQEIKIYDKEHKIPFKKHFKVLQRENKTI 585
++ + RGS+P++WEQ L L + + + + F +H +L+ +
Sbjct: 191 G-VSSFVQIRGSVPLFWEQPGLQVGSHHLRLHRGL----EANAPAFDRHMVLLKEQYGQQ 245
Query: 586 FVINLLSSKINE 621
V+NLL S+ E
Sbjct: 246 VVVNLLGSRGGE 257
>gi|3241995 (AF041862) synaptojanin 2 isoform alpha [Mus musculus]
Length = 1216
Score = 55.4 bits (131), Expect = 3e-07
Identities = 38/120 (31%), Positives = 69/120 (56%), Gaps = 8/120 (6%)
Query: 262 LFCGYINSKVSY----RYTTTILSFISKNRIGPRFICRGVDDDGNSSFFVKTICQVKRDD 429
+ CG + + Y + ++S IS R G RF+ RGV+DDG+ S FV+T + DD
Sbjct: 99 VICGVVTIRTVYASHKQAKACLISRISCERAGARFLTRGVNDDGHVSNFVETEQTIYMDD 158
Query: 430 EIINEKILYRGSIPVYWEQ-KLSL-RQEIKIYD--KEHKIPFKKHFKVLQRENKTIFVIN 597
++ + RGS+P++WEQ +L + ++++ + F++H +L+ + V+N
Sbjct: 159 G-VSSFVQIRGSVPLFWEQPRLQVGSHHLRLHRGLGANAPAFERHMVLLKEQYGKQVVVN 217
Query: 598 LLSSKINE 621
L S+ E
Sbjct: 218 LPGSRGGE 225
>gi|3241985 (AF041857) synaptojanin 2 isoform beta [Mus musculus]
Length = 1145
Score = 55.4 bits (131), Expect = 3e-07
Identities = 38/120 (31%), Positives = 69/120 (56%), Gaps = 8/120 (6%)
Query: 262 LFCGYINSKVSY----RYTTTILSFISKNRIGPRFICRGVDDDGNSSFFVKTICQVKRDD 429
+ CG + + Y + ++S IS R G RF+ RGV+DDG+ S FV+T + DD
Sbjct: 184 VICGVVTIRTVYASHKQAKACLISRISCERAGARFLTRGVNDDGHVSNFVETEQTIYMDD 243
Query: 430 EIINEKILYRGSIPVYWEQ-KLSL-RQEIKIYD--KEHKIPFKKHFKVLQRENKTIFVIN 597
++ + RGS+P++WEQ +L + ++++ + F++H +L+ + V+N
Sbjct: 244 G-VSSFVQIRGSVPLFWEQPRLQVGSHHLRLHRGLGANAPAFERHMVLLKEQYGKQVVVN 302
Query: 598 LLSSKINE 621
L S+ E
Sbjct: 303 LPGSRGGE 310
>gi|417726|sp|P32368|RSD1_YEAST RECESSIVE SUPPRESSOR OF SECRETORY DEFECT >gi|83515|pir||A33622 RSD1
protein - yeast (Saccharomyces cerevisiae)
>gi|473138|emb|CAA53561| (X75951) RSD1 (SAC1)
[Saccharomyces cerevisiae] >gi|486379|emb|CAA82057|
(Z28212) ORF YKL212w [Saccharomyces cerevisiae]
>gi|4388552|emb|CAA35979| (X51672) recessive suppressor
of secretory defect [Saccharomyces cerevisiae]
>gi|226736|prf||1604363A RSD1 gene [Saccharomyces
cerevisiae]
Length = 623
Score = 51.5 bits (121), Expect = 5e-06
Identities = 46/144 (31%), Positives = 80/144 (54%), Gaps = 23/144 (15%)
Query: 193 KIEDDRFIWNTNM-------------INNNISTQIYLFCGYINSKVSYRYTTTILSFISK 333
K D+RF WN + I++ I IY + +++ ++ T +L I++
Sbjct: 149 KTADERFFWNHYLTEDLRNFAHQDPRIDSFIQPVIYGYAKTVDAVLNA--TPIVLGLITR 206
Query: 334 N---RIGPRFICRGVDDDGNSSFFVKTICQVKRDDEIINEKI------LYRGSIPVYWEQ 486
R G R+ RGVD DGN F +T Q+ + +EKI RGS+P+YW +
Sbjct: 207 RSIFRAGTRYFRRGVDKDGNVGNFNETE-QILLAENPESEKIHVFSFLQTRGSVPIYWAE 265
Query: 487 KLSLRQEIKIYDKEHKI-PFKKHFKVLQRENKTIFVINLLSSKINEL 624
+L+ + + E+ + KKHF + +++NL++ K +EL
Sbjct: 266 INNLKYKPNLVLGENSLDATKKHFDQQKELYGDNYLVNLVNQKGHEL 312
>gi|3876550|emb|CAB03020| (Z81072) predicted using Genefinder; Similarity to Yeast recessive
suppressor of secretory defect (SW:RSD1_YEAST)
[Caenorhabditis elegans]
Length = 591
Score = 51.5 bits (121), Expect = 5e-06
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 12/99 (12%)
Query: 205 DRFIWNTNMINNNISTQ---------IYLFCGYINSKVSYR-YTTTILSFISKNRIGPRF 354
+RFIWN ++++ I+ F G V+ + TI+S S R G RF
Sbjct: 170 ERFIWNGHLLSQIRQVPGAERYTLPVIHGFIGQNRVNVNGKEIKLTIISRRSIYRAGVRF 229
Query: 355 ICRGVDDDGNSSFFVKT--ICQVKRDDEIINEKILYRGSIPVYWEQKLSLR 501
RGVD DG+++ FV+T I + D+ + + RGSIP+ W QK +LR
Sbjct: 230 YKRGVDVDGHAANFVETEQIVEYTNPDKHLTSFVQLRGSIPLLWTQKPNLR 280
>gi|3287695 (AC003979) Similar to hypothetical protein C34B7.2 gb|1729503 from
C. elegans cosmid gb|Z83220. [Arabidopsis thaliana]
Length = 925
Score = 49.2 bits (115), Expect = 2e-05
Identities = 44/139 (31%), Positives = 81/139 (57%), Gaps = 22/139 (15%)
Query: 202 DDRFIWNTNMI-------NNNISTQIYLFCGYINSKVSYR---YTTTILSFISKNRIGPR 351
D+ F+WN+ + NN I T + + ++S ++ T++S S++ G R
Sbjct: 209 DNIFVWNSYLTQPIRSRCNNTIWTLALVHGHFKQIRLSIYGRDFSVTLVSRRSRHFAGTR 268
Query: 352 FICRGVDDDGNSSFFVKTICQVKRDDEI------INEKILYRGSIPVYWEQKLSLRQE-- 507
++ RGV+D G + V+T Q+ DDE ++ + RGSIP++W Q+ S
Sbjct: 269 YLKRGVNDRGRVANDVETE-QLVLDDEAGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKP 327
Query: 508 ---IKIYDKEHKIPFKKHFK-VLQRENKTIFVINLLSSKIN 618
++ YD ++ K HF+ ++ R I V+NL+ + I+
Sbjct: 328 DIFLQRYDPTYE-STKMHFEDLVNRYGNPIIVLNLIKTNIH 367
>gi|4240191|dbj|BAA74874| (AB020658) KIAA0851 protein [Homo sapiens]
Length = 587
Score = 49.2 bits (115), Expect = 2e-05
Identities = 44/140 (31%), Positives = 78/140 (55%), Gaps = 15/140 (10%)
Query: 202 DDRFIWNTNMINN-NISTQIYLFC-----GYI---NSKVSYRYTTTIL-SFISKNRIGPR 351
D RF+WN +++ + +++ F G+I + ++ +Y IL S S R G R
Sbjct: 163 DQRFVWNGHLLRELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRAGVR 222
Query: 352 FICRGVDDDGNSSFFVKTICQVKRDDEIINEKILYRGSIPVYWEQKLSLR-----QEIKI 516
+ RG+D +G+++ FV+T Q+ + + RGSIPV+W Q+ +L+ Q K+
Sbjct: 223 YYVRGIDSEGHAANFVETE-QIVHYNGSKASFVQTRGSIPVFWSQRPNLKYKPLPQISKV 281
Query: 517 YDKEHKIPFKKHFKVLQRENKTIFVINLLSSKINE 621
H F++HF +INL++ K +E
Sbjct: 282 --ANHMDGFQRHFDSQVIIYGKQVIINLINQKGSE 314
>gi|3080522|emb|CAA18651| (AL022599) hypothetical protein [Schizosaccharomyces pombe]
Length = 598
Score = 48.0 bits (112), Expect = 6e-05
Identities = 45/141 (31%), Positives = 73/141 (50%), Gaps = 20/141 (14%)
Query: 202 DDRFIWNT-------------NMINNNISTQIYLFCGYINSKVSYR-YTTTILSFISKNR 339
D RF WN + ++ I+ IY F ++ V R T ++S SK R
Sbjct: 144 DKRFFWNEFASKDFIDLIGAHSEVSLFITPMIYGFITSASTIVKGRTITLALISRRSKQR 203
Query: 340 IGPRFICRGVDDDGNSSFFVKT--ICQVKRD-DEIINEKILYRGSIPVYWEQKLSLRQEI 510
G R+ RG+D++GN + F +T I V + E+ + RGS+P +W + +LR +
Sbjct: 204 AGTRYFTRGLDENGNPANFNETEQITIVSDEKSEVTYSHVQTRGSVPAFWAEVNNLRYKP 263
Query: 511 KIYDKEHKI---PFKKHFKVLQRENKTIFVINLLSSKINEL 624
+ + KKHF V+NL++ K +EL
Sbjct: 264 LMVANSASMAAAAAKKHFDEQISIYGDQVVVNLVNCKGHEL 304
>gi|1657619 (U72504) G5p [Arabidopsis thaliana] >gi|3068710 (AF049236) putative
transmembrane protein G5p [Arabidopsis thaliana]
Length = 588
Score = 44.9 bits (104), Expect = 5e-04
Identities = 38/136 (27%), Positives = 76/136 (54%), Gaps = 13/136 (9%)
Query: 193 KIEDDRFIWNTNMINNNISTQIYLFC------GYINSKVSYRYTTTILSFISKN---RIG 345
K D R++WN +++ + I ++ F Y +++ + + ++S +S+ R+G
Sbjct: 167 KQADPRYVWNWHLLEDLIECKLDGFIIPILQGSYQVAELKLKNSPAVVSIMSRRCTRRLG 226
Query: 346 PRFICRGVDDDGNSSFFVKTICQVKRDDEIINEKILYRGSIPVYWEQ--KLSLRQEIKIY 519
R RG + +G+++ FV++ Q+ + + RGSIP+ WEQ LS + +KI
Sbjct: 227 TRMWRRGANLEGDAANFVESE-QIVEINGFKFSLLQVRGSIPLLWEQIVDLSYKPRLKI- 284
Query: 520 DKEHKIP--FKKHFKVLQRENKTIFVINL 600
+K + P ++HF L + I ++L
Sbjct: 285 NKHEETPKVVQRHFHDLCQRYGEIMAVDL 313
>gi|731772|sp|P40559|YIA2_YEAST HYPOTHETICAL 108.4 KD PROTEIN IN BET1-PAN1 INTERGENIC REGION
>gi|626345|pir||S48433 inositol-1,4,5-trisphosphate
5-phosphatase homolog YIL002c - yeast (Saccharomyces
cerevisiae) >gi|557848|emb|CAA86201| (Z38062) orf, len:
946, CAI: 0.12, similar to S29069 S29 069 INOSITOL
POLYPHOSPHATE-5-PHOSPHATASE [Saccharomyces cerevisiae]
Length = 946
Score = 44.1 bits (102), Expect = 8e-04
Identities = 43/155 (27%), Positives = 78/155 (49%), Gaps = 29/155 (18%)
Query: 148 IKKFIENHNFYVSHKKIEDDR---FIWNTNMIN---------NNISTQIYLFCGYINSKV 291
I ++NH + + D++ FIWN N+ + +N Q++ G++ +
Sbjct: 168 ISNIVKNHGLSHNLEYTVDNQDLSFIWNANLASEVINWRSKISNEEKQLFANAGFLTFVI 227
Query: 292 SYRYTT------------TILSFISKNRIGPRFICRGVDDDGNSSFFVKTICQVKRDDEI 435
T TI+S IS G+ +DG S FV+T V + I
Sbjct: 228 RGYCKTALIEDGPNTASITIISRISTESKQDTLELEGISEDGRVSLFVETEIVVTTEKFI 287
Query: 436 INEKILYRGSIPVYW---EQKLSLRQEIKIYDK--EHKIPFKKHFKVLQRENKTIFVINL 600
+ + GSIP++W E +L ++IK+ E + F +HF L + + ++N+
Sbjct: 288 FSYTQV-NGSIPLFWESVESQLLYGKKIKVTKDSIEAQGAFDRHFDNLTSKYGVVSIVNI 346
Query: 601 LSSK 612
+ K
Sbjct: 347 IKPK 350
>gi|3874654|emb|CAB05701| (Z83220) Similarity to Yeast hypothetical 101.7 KD protein YNOD
(SW:YNOD_YEAST) [Caenorhabditis elegans]
Length = 921
Score = 43.4 bits (100), Expect = 0.001
Identities = 42/134 (31%), Positives = 74/134 (54%), Gaps = 25/134 (18%)
Query: 202 DDRFIWNTNMIN----NNISTQ--IYLFCGYINSKVSY----RYTTTILSFISKNRIGPR 351
D+RF+WN+ ++ N IS + + + GY+ + + R + TI+ S G R
Sbjct: 192 DERFVWNSFLLEPLRKNLISERWFVEIVHGYVRQEYIFLPIGRISLTIIGRRSTKYAGTR 251
Query: 352 FICRGVDDDGNSSFFVKTICQVKRD--------DEIINEKILYRGSIPVYWEQKLSLR-- 501
F+ RG + GN + +V+T Q+ D D + + RGS+P+ W Q S R
Sbjct: 252 FLKRGANPTGNVANYVETE-QIVWDMASSGNVADGRFSSFVQMRGSVPMRWSQDPSTRGV 310
Query: 502 --QEIKIYD--KEHKIPFKKHFK-VLQRENKTIFVINLL 603
+ + + D + H HF+ V + I ++NL+
Sbjct: 311 VGKPLILIDNHEPHAQTAASHFRDVRNKYGNPIVIMNLI 349
>gi|2497367|sp|Q92562|Y274_HUMAN HYPOTHETICAL PROTEIN KIAA0274 >gi|1665813|dbj|BAA13403| (D87464)
Similar to S.cerevisiae hypothetical protein N0330
(S55864) [Homo sapiens]
Length = 907
Score = 41.0 bits (94), Expect = 0.007
Identities = 38/135 (28%), Positives = 70/135 (51%), Gaps = 21/135 (15%)
Query: 208 RFIWNTNMINNNISTQ--------IYLFCGYINSKVSYRYT-TTILSFISKNRIGPRFIC 360
+++WN +++ ST I+ FCG + R T+++ S G RF+
Sbjct: 227 KYVWNGELLDIIKSTVHRDWLLYIIHGFCGQSKLLIYGRPVYVTLIARRSSKFAGTRFLK 286
Query: 361 RGVDDDGNSSFFVKTICQVKRDDEIIN-------EKILYRGSIPVYWEQKLSLRQEIKIY 519
RG + +G+ + V+T Q+ D +++ + RGS+P+YW Q +S
Sbjct: 287 RGANCEGDVANEVETE-QILCDASVMSFTAGSYSSYVQVRGSVPLYWSQDISTMMPKPPI 345
Query: 520 DKEHKIPFKK----HF-KVLQRENKTIFVINLLSSK 612
+ PF HF ++ QR I ++NL+ +
Sbjct: 346 TLDQADPFAHVAALHFDQMFQRFGSPIIILNLVKER 381
>gi|2462676|emb|CAB16732| (Z99568) hypothetical protein. [Schizosaccharomyces pombe]
Length = 373
Score = 39.9 bits (91), Expect = 0.016
Identities = 38/138 (27%), Positives = 69/138 (49%), Gaps = 11/138 (7%)
Query: 217 WNTNMINNNIS-TQIYLFCGYINSKVSYRYTTTILSFISKNRIGPRFICRGVDDDGNSSF 393
W MI NI+ T +L +Y +++ S + G R+ RGV+ G+++
Sbjct: 180 WIQPMIQGNIAITNSFL--------KTYNLRLCVITRHSPDYAGTRYFTRGVNAQGSAAN 231
Query: 394 F--VKTICQVKRDDEIINEKIL----YRGSIPVYWEQ--KLSLRQEIKIYDKEH-KIPFK 546
F ++ I ++ + + +L RGSIP++W + L R + + ++ + F
Sbjct: 232 FNEIEQIIMIESPITLEEQMVLSFTQIRGSIPMFWAEVNDLHYRPLLSLQPLDYSETVFG 291
Query: 547 KHFKVLQRE-NKTIFVINLLSSKINELXL 630
KHF+ L + + V+NLL K E L
Sbjct: 292 KHFQELANDYGDNLVVVNLLDQKGREAPL 320
>gi|1176581|sp|P42837|YN65_YEAST HYPOTHETICAL 101.7 KD PROTEIN IN EGT2-KRE1 INTERGENIC REGION
>gi|1362347|pir||S55864 hypothetical protein YNL325c -
yeast (Saccharomyces cerevisiae)
>gi|633661|emb|CAA86373| (Z46259) NO330 [Saccharomyces
cerevisiae] >gi|1302440|emb|CAA96256| (Z71601) ORF
YNL325c [Saccharomyces cerevisiae]
Length = 879
Score = 36.0 bits (81), Expect = 0.24
Identities = 43/137 (31%), Positives = 78/137 (56%), Gaps = 38/137 (27%)
Query: 202 DDRFIWNTNMIN----------NNISTQIYLFCGYIN-SKVSYRYTTTILSFISKNRIGP 348
++ F+WN N+++ + I+ F +N S + T+++ S + G
Sbjct: 214 NEMFVWNNNLLSPIFACIDTVFDWFQCIIHGFIDQVNVSVLGKSIYITLIARRSHHFAGA 273
Query: 349 RFICRGVDDDGNSSFFVKTICQVKRDDEIINEKIL---------------------YRGS 465
RF+ RGV++ G+ + V+T ++I+ + IL +RGS
Sbjct: 274 RFLKRGVNNKGHVANEVET-------EQIVTDMILTPFHQPGNGFFDSDRYTSFVQHRGS 326
Query: 466 IPVYWEQ---KLSLRQEIKIYDKEHKI-PFKKHF-KVLQR-ENKTIFVINLLSSK 612
IP+YW Q L+ + I+I + P HF + QR TI ++NL+ +K
Sbjct: 327 IPLYWTQDASNLTTKPPIRINVVDPFFSPAALHFDNLFQRYGGGTIQILNLIKTK 381
>gi|1075482|pir||S52462 hypothetical protein 526 - Coxiella burnetii
>gi|682757|emb|CAA59203| (X84722) orf 526; translated
orf similarity to E' protein of Coxiella burnetii
(strain Biotzere, accession number M29982) [Coxiella
burnetii]
Length = 526
Score = 32.5 bits (72), Expect = 2.7
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 298 RYTTTILSFISKNRIGPRFICRGVDDDGNSSFFVKTICQVKRDDEIINEKILYRGSIPV- 474
+YT T+LS + P + V DD N +F + +K E N ++G + +
Sbjct: 41 KYTITLLSARNVQNTQPAVVHISVMDDANETFCPRVTKALKFTYEPQNTDFPWKGMLEIA 100
Query: 475 YWEQKLSLRQEIKIYDKEHKIPFKKHFKVLQRENKTI 585
EQ+L EI+ K H +P K K+L+R TI
Sbjct: 101 ITEQELF---EIREKSKGHPLPVTK--KLLKRGQGTI 132
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Apr 12, 1999 12:54 PM
Number of letters in database: 112,640,273
Number of sequences in database: 368,476
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94205217
Number of Sequences: 368476
Number of extensions: 1640417
Number of successful extensions: 4585
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 4538
Number of HSP's gapped (non-prelim): 32
length of query: 210
length of database: 112640273
effective HSP length: 53
effective length of query: 156
effective length of database: 93111045
effective search space: 14525323020
effective search space used: 14525323020
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 67 (30.5 bits)