BLASTX 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 14VII55R
         (573 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           369,800 sequences; 113,023,754 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|1171589|emb|CAA64574| (X95275) frameshift [Plasmodium falcipa...    31  7.1


>gi|1171589|emb|CAA64574| (X95275) frameshift [Plasmodium falciparum]
           Length = 960
           
 Score = 30.9 bits (68), Expect = 7.1
 Identities = 29/102 (28%), Positives = 41/102 (39%), Gaps = 5/102 (4%)

Query: 75  NFVFLIHIISNNYYAFIKN*L***NI*QIKIN---NLRILYNRYKYNILKNFIFSCSLS- 242
           NF+    I  NNYY +  N     N+ Q   N   N  +LYN+  YN + N I++  L+ 
Sbjct: 648 NFIHNHIIYKNNYYIYNNNM----NLYQYNKNILINNNLLYNKLFYNYINNNIYNLYLND 703

Query: 243 -TIYKKEISXXXXXXXXXXXXXXXXXXXXXXXXXLYYRYKXNIFKIF 380
            TI  + I+                          YY Y  NI  I+
Sbjct: 704 ITIGLQSINIIFENKNIKDNIFFISNNIYVIFYIKYYNYLNNIIYIY 750


  Database: Non-redundant GenBank CDS
  translations+PDB+SwissProt+SPupdate+PIR
    Posted date:  Apr 17, 1999  5:33 AM
  Number of letters in database: 113,023,754
  Number of sequences in database:  369,800
  
Lambda     K      H
   0.318    0.135     0.00 

Gapped
Lambda     K      H
   0.270   0.0470 4.94e-324 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56118302
Number of Sequences: 369800
Number of extensions: 644049
Number of successful extensions: 931
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 927
Number of HSP's gapped (non-prelim): 4
length of query: 191
length of database: 113023754
effective HSP length: 53
effective length of query: 137
effective length of database: 93424354
effective search space: 12799136498
effective search space used: 12799136498
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 67 (30.5 bits)