BLASTX 2.0.8 [Jan-05-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 14VII54R
(900 letters)
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
368,476 sequences; 112,640,273 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|2935517 (AF049912) methionine aminopeptidase [Drosophila mela... 166 2e-40
gi|1703273|sp|P50579|AMP2_HUMAN METHIONINE AMINOPEPTIDASE 2 (MET... 166 3e-40
gi|1703275|sp|P38062|AMP2_RAT METHIONINE AMINOPEPTIDASE 2 (METAP... 163 1e-39
gi|3023282|sp|O08663|AMP2_MOUSE METHIONINE AMINOPEPTIDASE 2 (MET... 163 1e-39
gi|3006161|emb|CAA18421| (AL022305) putative methionine metallop... 152 3e-36
gi|482458|pir||A46702 methionyl aminopeptidase (EC 3.4.11.18) 2 ... 151 7e-36
gi|3212871 (AC004005) putative translation initiation factor [Ar... 147 8e-35
gi|1703277|sp|P38174|AMP2_YEAST METHIONINE AMINOPEPTIDASE 2 (MET... 145 6e-34
gi|1870087|emb|CAA84913| (Z35852) ORF YBL091c [Saccharomyces cer... 145 6e-34
gi|626956|pir||S45411 methionyl aminopeptidase (EC 3.4.11.18) MA... 145 6e-34
gi|3023283|sp|P56218|AMPM_PYRFU METHIONINE AMINOPEPTIDASE (MAP) ... 82 7e-15
gi|3121747|sp|O27355|AMPM_METTH METHIONINE AMINOPEPTIDASE (MAP) ... 80 2e-14
gi|3122371|sp|O28438|AMPM_ARCFU METHIONINE AMINOPEPTIDASE (MAP) ... 76 4e-13
gi|3023292|sp|P95963|AMPM_SULSO METHIONINE AMINOPEPTIDASE (MAP) ... 75 7e-13
gi|3257034|dbj|BAA29717| (AP000003) 295aa long hypothetical meth... 74 1e-12
gi|1723458|sp|P50581|YD43_CAEEL HYPOTHETICAL 20.7 KD PROTEIN T27... 71 1e-11
gi|2497794|sp|Q58725|AMPM_METJA METHIONINE AMINOPEPTIDASE (MAP) ... 69 5e-11
gi|3877451|emb|CAB03119| (Z81086) Similarity to Rat initiation f... 67 2e-10
gi|1408266 (U61403) PrlA [Dictyostelium discoideum] 58 8e-08
gi|1657617 (U72503) G2p [Arabidopsis thaliana] >gi|3068707 (AF04... 51 1e-05
gi|2511541 (AF020787) DNA-binding protein GBP16 [Oryza sativa] 50 2e-05
gi|1709587|sp|P50580|PLS1_MOUSE PROLIFERATION-ASSOCIATED PROTEIN... 49 5e-05
gi|2697005 (U59435) cell cycle protein p38-2G4 homolog [Homo sap... 49 5e-05
gi|4160449 (AF104670) cell cycle protein [Homo sapiens] 49 5e-05
gi|1083448|pir||S54181 p38-2G4 protein - mouse >gi|790470|emb|CA... 49 5e-05
gi|4099506 (U87954) erbB3 binding protein EBP1 [Homo sapiens] 49 5e-05
gi|1168857|sp|Q09184|CDB4_SCHPO CURVED DNA-BINDING PROTEIN (42 K... 44 0.001
gi|141441|sp|P22624|AMPM_METFE PROBABLE METHIONINE AMINOPEPTIDAS... 37 0.17
gi|3861323|emb|CAA15222| (AJ235273) NADH DEHYDROGENASE I CHAIN H... 34 1.9
gi|139137|sp|P20951|RRPO_PMV RNA REPLICATION PROTEIN (176 KD PRO... 32 4.3
gi|2983061 (AE000687) putative protein [Aquifex aeolicus] 32 4.3
>gi|2935517 (AF049912) methionine aminopeptidase [Drosophila melanogaster]
Length = 448
Score = 166 bits (417), Expect = 2e-40
Identities = 88/191 (46%), Positives = 121/191 (63%), Gaps = 3/191 (1%)
Query: 895 GLECIAVDVRVCDIGKEIEEVVSSYEV--DGKMVPVKSVKNLTGHSIEQFKIHGGVAIPI 722
G+ +DVR+CDIG I+EV+ SYE+ DGK P+K+++NL GHSI ++IH G +PI
Sbjct: 257 GIREAGIDVRLCDIGAAIQEVMESYEIELDGKTYPIKAIRNLNGHSISPYRIHAGKTVPI 316
Query: 721 IDNGDETKLKADMFYACETFVTTGNGVVRDAENCSHYMLE-DSKRYMVKNANSKKVLQAI 545
+ G+ T+++ D FYA ETF +TG G+V D +CSHYM D ++ +SK++L I
Sbjct: 317 VKGGESTRMEEDEFYAIETFGSTGRGLVHDDMDCSHYMKNFDLPFVPLRLQSSKQLLGTI 376
Query: 544 LKNVGTLPFSPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHTCYL 365
KN GTL F R +DR K +K L I+EAYPPL D KG AQ+EHT L
Sbjct: 377 NKNFGTLAFCKRWLDRAGATK--YQMALKDLCDKGIVEAYPPLCDIKGCYTAQYEHTIML 434
Query: 364 SESSKITLTRGDDY 323
+ K ++RGDDY
Sbjct: 435 RPTCKEVVSRGDDY 448
>gi|1703273|sp|P50579|AMP2_HUMAN METHIONINE AMINOPEPTIDASE 2 (METAP 2) (PEPTIDASE M 2) (INITIATION
FACTOR 2 ASSOCIATED 67 KD GLYCOPROTEIN) (P67)
>gi|2144483|pir||DPHUM2 methionyl aminopeptidase (EC
3.4.11.18) 2 - human >gi|687243 (U13261)
eIF-2-associated p67 homolog [Homo sapiens] >gi|903982
(U29607) methionine aminopeptidase [Homo sapiens]
>gi|1094399|prf||2106146A initiation factor 2-associated
protein [Homo sapiens]
Length = 478
Score = 166 bits (415), Expect = 3e-40
Identities = 88/191 (46%), Positives = 119/191 (62%), Gaps = 3/191 (1%)
Query: 895 GLECIAVDVRVCDIGKEIEEVVSSYEV--DGKMVPVKSVKNLTGHSIEQFKIHGGVAIPI 722
G++C +DVR+CD+G+ I+EV+ SYEV DGK VK ++NL GHSI Q++IH G +PI
Sbjct: 287 GIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGQYRIHAGKTVPI 346
Query: 721 IDNGDETKLKADMFYACETFVTTGNGVVRDAENCSHYMLE-DSKRYMVKNANSKKVLQAI 545
+ G+ T+++ YA ETF +TG GVV D CSHYM D ++ +K +L I
Sbjct: 347 VKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVI 406
Query: 544 LKNVGTLPFSPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHTCYL 365
+N GTL F R +DR K +K L L I++ YPPL D KGS AQFEHT L
Sbjct: 407 NENFGTLAFCRRWLDRLGESK--YLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILL 464
Query: 364 SESSKITLTRGDDY 323
+ K ++RGDDY
Sbjct: 465 RPTCKEVVSRGDDY 478
>gi|1703275|sp|P38062|AMP2_RAT METHIONINE AMINOPEPTIDASE 2 (METAP 2) (PEPTIDASE M 2) (INITIATION
FACTOR 2 ASSOCIATED 67 KD GLYCOPROTEIN) (P67)
Length = 478
Score = 163 bits (409), Expect = 1e-39
Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 3/191 (1%)
Query: 895 GLECIAVDVRVCDIGKEIEEVVSSYEV--DGKMVPVKSVKNLTGHSIEQFKIHGGVAIPI 722
G++C +DVR+CD+G+ I+EV+ SYEV DGK VK ++NL GHSI ++IH G +PI
Sbjct: 287 GIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGPYRIHAGKTVPI 346
Query: 721 IDNGDETKLKADMFYACETFVTTGNGVVRDAENCSHYMLE-DSKRYMVKNANSKKVLQAI 545
+ G+ T+++ YA ETF +TG GVV D CSHYM D ++ +K +L I
Sbjct: 347 VKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVI 406
Query: 544 LKNVGTLPFSPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHTCYL 365
+N GTL F R +DR K +K L L I++ YPPL D KGS AQFEHT L
Sbjct: 407 NENFGTLAFCRRWLDRLGESK--YLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILL 464
Query: 364 SESSKITLTRGDDY 323
+ K ++RGDDY
Sbjct: 465 RPTCKEVVSRGDDY 478
>gi|3023282|sp|O08663|AMP2_MOUSE METHIONINE AMINOPEPTIDASE 2 (METAP 2) (PEPTIDASE M 2) (INITIATION
FACTOR 2 ASSOCIATED 67 KD GLYCOPROTEIN) (P67)
>gi|2055254|dbj|BAA19789| (AB003144) initiation factor
2-associated 67kDa protein [Mus musculus]
Length = 478
Score = 163 bits (409), Expect = 1e-39
Identities = 87/191 (45%), Positives = 118/191 (61%), Gaps = 3/191 (1%)
Query: 895 GLECIAVDVRVCDIGKEIEEVVSSYEV--DGKMVPVKSVKNLTGHSIEQFKIHGGVAIPI 722
G++C +DVR+CD+G+ I+EV+ SYEV DGK VK ++NL GHSI ++IH G +PI
Sbjct: 287 GIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGPYRIHAGKTVPI 346
Query: 721 IDNGDETKLKADMFYACETFVTTGNGVVRDAENCSHYMLE-DSKRYMVKNANSKKVLQAI 545
+ G+ T+++ YA ETF +TG GVV D CSHYM D ++ +K +L I
Sbjct: 347 VKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVI 406
Query: 544 LKNVGTLPFSPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHTCYL 365
+N GTL F R +DR K +K L L I++ YPPL D KGS AQFEHT L
Sbjct: 407 NENFGTLAFCRRWLDRLGESK--YLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILL 464
Query: 364 SESSKITLTRGDDY 323
+ K ++RGDDY
Sbjct: 465 RPTCKEVVSRGDDY 478
>gi|3006161|emb|CAA18421| (AL022305) putative methionine metallopeptidase
[Schizosaccharomyces pombe]
Length = 426
Score = 152 bits (380), Expect = 3e-36
Identities = 82/192 (42%), Positives = 120/192 (61%), Gaps = 3/192 (1%)
Query: 898 KGLECIAVDVRVCDIGKEIEEVVSSYEVD--GKMVPVKSVKNLTGHSIEQFKIHGGVAIP 725
KG+E +D R+ +IG+ I+EV+ SYEV+ GK VKS++NL GH+++ + IHGG ++P
Sbjct: 234 KGIEEAGIDARLNEIGEAIQEVMESYEVEINGKTHQVKSIRNLCGHNLDPYIIHGGKSVP 293
Query: 724 IIDNGDETKLKADMFYACETFVTTGNGVVRDAENCSHY-MLEDSKRYMVKNANSKKVLQA 548
I+ G+E K++ +A ETF +TG GVV + CSHY + D+ ++ +K +L
Sbjct: 294 IVKGGEEIKMEEGEIFAIETFGSTGRGVVHEDMECSHYAKIPDAGHIPLRLPRAKALLNT 353
Query: 547 ILKNVGTLPFSPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHTCY 368
I +N GTLPF R +DR K + L S I++ YPPL D +GS AQFEHT
Sbjct: 354 ITQNFGTLPFCRRYLDRIGESK--YLLALNNLVSAGIVQDYPPLCDIRGSYTAQFEHTII 411
Query: 367 LSESSKITLTRGDDY 323
L + K ++RGDDY
Sbjct: 412 LHPTQKEVVSRGDDY 426
>gi|482458|pir||A46702 methionyl aminopeptidase (EC 3.4.11.18) 2 - rat >gi|204004 (L10652)
initiation factor 2 associated 67 kDa protein [Rattus
rattus]
Length = 480
Score = 151 bits (377), Expect = 7e-36
Identities = 81/182 (44%), Positives = 111/182 (60%), Gaps = 3/182 (1%)
Query: 895 GLECIAVDVRVCDIGKEIEEVVSSYEV--DGKMVPVKSVKNLTGHSIEQFKIHGGVAIPI 722
G++C +DVR+CD+G+ I+EV+ SYEV DGK VK ++NL GHSI ++IH G +PI
Sbjct: 287 GIKCAGIDVRLCDVGEAIQEVMESYEVEIDGKTYQVKPIRNLNGHSIGPYRIHAGKTVPI 346
Query: 721 IDNGDETKLKADMFYACETFVTTGNGVVRDAENCSHYMLE-DSKRYMVKNANSKKVLQAI 545
+ G+ T+++ YA ETF +TG GVV D CSHYM D ++ +K +L I
Sbjct: 347 VKGGEATRMEEGEVYAIETFGSTGKGVVHDDMECSHYMKNFDVGHVPIRLPRTKHLLNVI 406
Query: 544 LKNVGTLPFSPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHTCYL 365
+N GTL F R +DR K +K L L I++ YPPL D KGS AQFEHT
Sbjct: 407 NENFGTLAFCRRWLDRLGESK--YLMALKNLCDLGIVDPYPPLCDIKGSYTAQFEHTILC 464
Query: 364 SESSK 350
++ K
Sbjct: 465 AQPVK 469
>gi|3212871 (AC004005) putative translation initiation factor [Arabidopsis
thaliana]
Length = 431
Score = 147 bits (368), Expect = 8e-35
Identities = 80/191 (41%), Positives = 118/191 (60%), Gaps = 3/191 (1%)
Query: 895 GLECIAVDVRVCDIGKEIEEVVSSYEVD--GKMVPVKSVKNLTGHSIEQFKIHGGVAIPI 722
G++ VDVR+CD+G ++EV+ SYEV+ GK+ VKS++NL GHSI +++IH ++P
Sbjct: 240 GIKEAGVDVRLCDVGAAVQEVMESYEVEINGKVYQVKSIRNLNGHSIGRYQIHAEKSVPN 299
Query: 721 IDNGDETKLKADMFYACETFVTTGNGVVRDAENCSHYMLE-DSKRYMVKNANSKKVLQAI 545
+ G++TK++ YA ETF +TG G VR+ CSHYM D ++ +K++L I
Sbjct: 300 VRGGEQTKMEEGELYAIETFGSTGKGYVREDLECSHYMKNYDVGHVPLRLPRAKQLLATI 359
Query: 544 LKNVGTLPFSPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHTCYL 365
KN TL F R +DR K +K L I+E PP+ D KGS ++QFEHT L
Sbjct: 360 NKNFSTLAFCRRYLDRLGETK--YLMALKNLCDSGIIEPCPPVCDVKGSYISQFEHTILL 417
Query: 364 SESSKITLTRGDDY 323
+ K +++GDDY
Sbjct: 418 RPTCKEIISKGDDY 431
>gi|1703277|sp|P38174|AMP2_YEAST METHIONINE AMINOPEPTIDASE 2 (METAP 2) (PEPTIDASE M 2) >gi|1045302
(U17437) methionine aminopeptidase 2 [Saccharomyces
cerevisiae]
Length = 421
Score = 145 bits (361), Expect = 6e-34
Identities = 82/191 (42%), Positives = 115/191 (59%), Gaps = 4/191 (2%)
Query: 895 GLECIAVDVRVCDIGKEIEEVVSSYEVD--GKMVPVKSVKNLTGHSIEQFKIHGGVAIPI 722
G++ +DVR+ DIG+ I+EV+ SYEV+ G+ VK +NL GHSI ++IHGG ++PI
Sbjct: 230 GIKEAGIDVRLTDIGEAIQEVMESYEVEINGETYQVKPCRNLCGHSIAPYRIHGGKSVPI 289
Query: 721 IDNGDETKLKADMFYACETFVTTGNGVVRDAENCSHYMLEDSKRYMVKNANS-KKVLQAI 545
+ NGD TK++ +A ETF +TG G V SHY ++ +S K +L+ I
Sbjct: 290 VKNGDTTKMEEGEHFAIETFGSTGRGYVTAGGEVSHYARSAEDHQVMPTLDSAKNLLKTI 349
Query: 544 LKNVGTLPFSPRDIDRYVTVKGGSYPF-IKTLASLRILEAYPPLNDSKGSKVAQFEHTCY 368
+N GTLPF R +DR K Y F + L +++ YPPLND GS AQFEHT
Sbjct: 350 DRNFGTLPFCRRYLDRLGQEK---YLFALNNLVRHGLVQDYPPLNDIPGSYTAQFEHTIL 406
Query: 367 LSESSKITLTRGDDY 323
L K +++GDDY
Sbjct: 407 LHAHKKEVVSKGDDY 421
>gi|1870087|emb|CAA84913| (Z35852) ORF YBL091c [Saccharomyces cerevisiae]
Length = 421
Score = 145 bits (361), Expect = 6e-34
Identities = 82/191 (42%), Positives = 115/191 (59%), Gaps = 4/191 (2%)
Query: 895 GLECIAVDVRVCDIGKEIEEVVSSYEVD--GKMVPVKSVKNLTGHSIEQFKIHGGVAIPI 722
G++ +DVR+ DIG+ I+EV+ SYEV+ G+ VK +NL GHSI ++IHGG ++PI
Sbjct: 230 GIKEAGIDVRLTDIGEAIQEVMESYEVEINGETYQVKPCRNLCGHSIAPYRIHGGKSVPI 289
Query: 721 IDNGDETKLKADMFYACETFVTTGNGVVRDAENCSHYMLEDSKRYMVKNANS-KKVLQAI 545
+ NGD TK++ +A ETF +TG G V SHY ++ +S K +L+ I
Sbjct: 290 VKNGDTTKMEEGEHFAIETFGSTGRGYVTAGGEVSHYARSAEDHQVMPTLDSAKNLLKTI 349
Query: 544 LKNVGTLPFSPRDIDRYVTVKGGSYPF-IKTLASLRILEAYPPLNDSKGSKVAQFEHTCY 368
+N GTLPF R +DR K Y F + L +++ YPPLND GS AQFEHT
Sbjct: 350 DRNFGTLPFCRRYLDRLGQEK---YLFALNNLVRHGLVQDYPPLNDIPGSYTAQFEHTIL 406
Query: 367 LSESSKITLTRGDDY 323
L K +++GDDY
Sbjct: 407 LHAHKKEVVSKGDDY 421
>gi|626956|pir||S45411 methionyl aminopeptidase (EC 3.4.11.18) MAP2 - yeast (Saccharomyces
cerevisiae) >gi|496684|emb|CAA56011| (X79489) D-349
protein [Saccharomyces cerevisiae]
Length = 349
Score = 145 bits (361), Expect = 6e-34
Identities = 82/191 (42%), Positives = 115/191 (59%), Gaps = 4/191 (2%)
Query: 895 GLECIAVDVRVCDIGKEIEEVVSSYEVD--GKMVPVKSVKNLTGHSIEQFKIHGGVAIPI 722
G++ +DVR+ DIG+ I+EV+ SYEV+ G+ VK +NL GHSI ++IHGG ++PI
Sbjct: 158 GIKEAGIDVRLTDIGEAIQEVMESYEVEINGETYQVKPCRNLCGHSIAPYRIHGGKSVPI 217
Query: 721 IDNGDETKLKADMFYACETFVTTGNGVVRDAENCSHYMLEDSKRYMVKNANS-KKVLQAI 545
+ NGD TK++ +A ETF +TG G V SHY ++ +S K +L+ I
Sbjct: 218 VKNGDTTKMEEGEHFAIETFGSTGRGYVTAGGEVSHYARSAEDHQVMPTLDSAKNLLKTI 277
Query: 544 LKNVGTLPFSPRDIDRYVTVKGGSYPF-IKTLASLRILEAYPPLNDSKGSKVAQFEHTCY 368
+N GTLPF R +DR K Y F + L +++ YPPLND GS AQFEHT
Sbjct: 278 DRNFGTLPFCRRYLDRLGQEK---YLFALNNLVRHGLVQDYPPLNDIPGSYTAQFEHTIL 334
Query: 367 LSESSKITLTRGDDY 323
L K +++GDDY
Sbjct: 335 LHAHKKEVVSKGDDY 349
>gi|3023283|sp|P56218|AMPM_PYRFU METHIONINE AMINOPEPTIDASE (MAP) (PEPTIDASE M)
>gi|2392623|pdb|1XGS|A Chain A, Methionine
Aminopeptidase From Hyperthermophile Pyrococcus Furiosus
>gi|2392624|pdb|1XGS|B Chain B, Methionine
Aminopeptidase From Hyperthermophile Pyrococcus Furiosus
>gi|2982138|pdb|1XGM|A Chain A, Methionine
Aminopeptidase From Hyperthermophile Pyrococcus Furiosus
>gi|2982139|pdb|1XGM|B Chain B, Methionine
Aminopeptidase From Hyperthermophile Pyrococcus Furiosus
>gi|2982140|pdb|1XGN|A Chain A, Methionine
Aminopeptidase From Hyperthermophile Pyrococcus Furiosus
>gi|2982141|pdb|1XGN|B Chain B, Methionine
Aminopeptidase From Hyperthermophile Pyrococcus Furiosus
>gi|2982142|pdb|1XGO| Methionine Aminopeptidase From
Hyperthermophile Pyrococcus Furiosus
Length = 295
Score = 81.5 bits (198), Expect = 7e-15
Identities = 59/184 (32%), Positives = 91/184 (49%), Gaps = 1/184 (0%)
Query: 889 ECIAVDVRVCDIGKEIEEVVSSYEVDGKMVPVKSVKNLTGHSIEQFKIHGGVAIP-IIDN 713
E + + V G EI+E+ + E + + K + NL+GH IE++K+H G++IP I
Sbjct: 113 EALNAAISVARAGVEIKELGKAIENEIRKRGFKPIVNLSGHKIERYKLHAGISIPNIYRP 172
Query: 712 GDETKLKADMFYACETFVTTGNGVVRDAENCSHYMLEDSKRYMVKNANSKKVLQAILKNV 533
D LK +A E F T G G V + YM + V+ A ++ +L I +
Sbjct: 173 HDNYVLKEGDVFAIEPFATIGAGQVIEVPPTLIYMY--VRDVPVRVAQARFLLAKIKREY 230
Query: 532 GTLPFSPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHTCYLSESS 353
GTLPF+ R + + +G +KTL + YP L + + VAQFEHT + + S
Sbjct: 231 GTLPFAYRWLQNDMP-EGQLKLALKTLEKAGAIYGYPVLKEIRNGIVAQFEHTIIVEKDS 289
Query: 352 KITLT 338
I T
Sbjct: 290 VIVTT 294
>gi|3121747|sp|O27355|AMPM_METTH METHIONINE AMINOPEPTIDASE (MAP) (PEPTIDASE M) >gi|2622402
(AE000894) methionine aminopeptidase [Methanobacterium
thermoautotrophicum]
Length = 299
Score = 80.4 bits (195), Expect = 2e-14
Identities = 54/185 (29%), Positives = 93/185 (50%)
Query: 892 LECIAVDVRVCDIGKEIEEVVSSYEVDGKMVPVKSVKNLTGHSIEQFKIHGGVAIPIIDN 713
+ I V V +IG+ IEE + S+ ++ V NLTGHS+E++ +H G++IP I+
Sbjct: 124 ISTIRAGVEVGEIGRVIEETIHSHGMN-------PVSNLTGHSMERWILHSGLSIPNINE 176
Query: 712 GDETKLKADMFYACETFVTTGNGVVRDAENCSHYMLEDSKRYMVKNANSKKVLQAILKNV 533
+ +L+ A E F T G G+V D Y+ + ++ ++++VL I +
Sbjct: 177 RNTHQLEEGDVLAIEPFATDGVGLVTDMPQT--YIFRFLRERPLRLVHARRVLGKIREEY 234
Query: 532 GTLPFSPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHTCYLSESS 353
LPF+ R ++ Y K + ++ L R + Y L + G+ VAQ+EHT + E
Sbjct: 235 HALPFAQRWLEEYFDAKRLN-ASMRMLIQSRAIYPYHVLREKSGAMVAQWEHTVIVEEDG 293
Query: 352 KITLT 338
+T
Sbjct: 294 CTVIT 298
>gi|3122371|sp|O28438|AMPM_ARCFU METHIONINE AMINOPEPTIDASE (MAP) (PEPTIDASE M) >gi|2648708
(AE000976) methionyl aminopeptidase (map) [Archaeoglobus
fulgidus]
Length = 291
Score = 75.7 bits (183), Expect = 4e-13
Identities = 53/186 (28%), Positives = 86/186 (45%)
Query: 892 LECIAVDVRVCDIGKEIEEVVSSYEVDGKMVPVKSVKNLTGHSIEQFKIHGGVAIPIIDN 713
+E + V V +IGK IE+ +++Y K + NLTGH + + H +I
Sbjct: 121 MEVVRAGVSVSEIGKAIEDAITNYGF-------KPIVNLTGHGLLPYLNHAPPSIYNYAT 173
Query: 712 GDETKLKADMFYACETFVTTGNGVVRDAENCSHYMLEDSKRYMVKNANSKKVLQAILKNV 533
L+ M A E F T G G V + C Y L + + +K A +++L+ + +N
Sbjct: 174 EKGVTLEEGMVVAIEPFATNGVGKVGERGECEIYSLLNPRPVRMKMA--REILKEVEENY 231
Query: 532 GTLPFSPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHTCYLSESS 353
TLPF+ R + + + I LA +L AYP L + G V+Q+EHT + +
Sbjct: 232 KTLPFAKRWLKKAPDI------IISKLAREGVLRAYPVLTEVSGGLVSQWEHTLIVEDGG 285
Query: 352 KITLTR 335
T+
Sbjct: 286 ATITTK 291
>gi|3023292|sp|P95963|AMPM_SULSO METHIONINE AMINOPEPTIDASE (MAP) (PEPTIDASE M)
>gi|1707796|emb|CAA69553| (Y08257) eIF-2-associated
67-kD glycoprotein homolog [Sulfolobus solfataricus]
Length = 301
Score = 74.9 bits (181), Expect = 7e-13
Identities = 53/175 (30%), Positives = 86/175 (48%), Gaps = 2/175 (1%)
Query: 859 DIGKEIEEVVSSYEVDGKMVPVKSVKNLTGHSIEQFKIHGGVAIPIIDNGDETKLKADMF 680
+IG+ IE+V+ + K ++NL GH I ++++H GV IP + +++D
Sbjct: 133 EIGRVIEKVIRAQGY-------KPIRNLGGHLIRRYELHAGVFIPNVYERGLGVIQSDSV 185
Query: 679 YACETFVTTGNGVVRDAENCSHYMLEDSKRYMVKNANSK--KVLQAILKNVGTLPFSPRD 506
YA E F T G G V + ++ + Y L++ +K +S+ +++ I LPFS R
Sbjct: 186 YAIEPFATDGGGEVVEGKSITIYSLKNPN---IKGLSSRENELIDFIYTRFNYLPFSERW 242
Query: 505 IDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHTCYLSESSKITLTR 335
+ + T IK L L YP L + K V+QFEHT + S I T+
Sbjct: 243 LKEFSTNVDELRNNIKNLVKKGALRGYPILIEIKKGVVSQFEHTVIVKGDSIIVSTK 299
>gi|3257034|dbj|BAA29717| (AP000003) 295aa long hypothetical methionyl aminopeptidase
[Pyrococcus horikoshii]
Length = 295
Score = 74.1 bits (179), Expect = 1e-12
Identities = 57/184 (30%), Positives = 93/184 (49%), Gaps = 2/184 (1%)
Query: 889 ECIAVDVRVCDIGKEIEEVVSSYEVDGKMVPVKSVKNLTGHSIEQFKIHGGVAIP-IIDN 713
E + + V G E++E+ + E + + + NL+GH IE++K+H GV+IP I
Sbjct: 113 EALESAISVARAGVEVKELGKAIENEIRKRGFNPIVNLSGHKIERYKLHAGVSIPNIYRP 172
Query: 712 GDETKLKADMFYACETFVTTGNGVVRDAENCSHYM-LEDSKRYMVKNANSKKVLQAILKN 536
D L+ +A E F TTG G V + YM + D+ V+ A ++ +L I +
Sbjct: 173 HDNYVLQEGDVFAIEPFATTGAGQVIEVPPTLIYMYVRDAP---VRMAQARFLLAKIKRE 229
Query: 535 VGTLPFSPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHTCYLSES 356
TLPF+ R + + +G +++L L YP L + +G V QFEHT + E
Sbjct: 230 YKTLPFAYRWLQGEMP-EGQLKLALRSLERSGALYGYPVLREIRGGMVTQFEHT-IIVEK 287
Query: 355 SKITLT 338
+T+T
Sbjct: 288 DSVTVT 293
>gi|1723458|sp|P50581|YD43_CAEEL HYPOTHETICAL 20.7 KD PROTEIN T27A8.3 IN CHROMOSOME X
>gi|3880238|emb|CAA92223| (Z68134) Similarity to Human
methionine aminopeptidase 2 (SW:AMP2_HUMAN)
[Caenorhabditis elegans]
Length = 182
Score = 70.6 bits (170), Expect = 1e-11
Identities = 45/116 (38%), Positives = 61/116 (51%), Gaps = 4/116 (3%)
Query: 829 SSYEVDGKMVPVKSVKNLTGHSIEQFKIHGGVAIPIIDNGDETKLKADMFYACETFVTTG 650
S E G VK + +L G SI Q +IH G +PI+ G++ +++ + YA ETF +TG
Sbjct: 26 SKCEFHGNSNEVKPIGSLNGQSIAQCRIHTGKTVPIVKGGEQARMEENEIYAIETFGSTG 85
Query: 649 NGVVRDAENCSHYM----LEDSKRYMVKNANSKKVLQAILKNVGTLPFSPRDIDRYVTVK 482
G D SHYM L D K ++ SK +L+ I KN TL F IDR K
Sbjct: 86 KGYFHDDMETSHYMKNFELADEK-IPLRLQKSKGLLKLIDKNFATLAFCRCWIDRLEETK 144
>gi|2497794|sp|Q58725|AMPM_METJA METHIONINE AMINOPEPTIDASE (MAP) (PEPTIDASE M)
>gi|2129108|pir||H64465 methionyl aminopeptidase (EC
3.4.11.18) - Methanococcus jannaschii >gi|1591970
(U67573) methionyl aminopeptidase (map) [Methanococcus
jannaschii]
Length = 294
Score = 68.7 bits (165), Expect = 5e-11
Identities = 45/172 (26%), Positives = 82/172 (47%)
Query: 871 VRVCDIGKEIEEVVSSYEVDGKMVPVKSVKNLTGHSIEQFKIHGGVAIPIIDNGDETKLK 692
+ + ++GK I+EV+ SY K + NL+GH + ++++H G++IP + +
Sbjct: 129 MNIGEMGKIIQEVIESYGY-------KPISNLSGHVMHRYELHTGISIPNVYERTNQYID 181
Query: 691 ADMFYACETFVTTGNGVVRDAENCSHYMLEDSKRYMVKNANSKKVLQAILKNVGTLPFSP 512
A E F T G G+V+D + Y + ++ ++K+L I KN LPF+
Sbjct: 182 VGDLVAIEPFATDGFGMVKDGNLGNIYKF--LAKRPIRLPQARKLLDVISKNYPYLPFA- 238
Query: 511 RDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHTCYLSES 356
+R+V + +L + YP L + + V Q EHT ++E+
Sbjct: 239 ---ERWVLKNESERLALNSLIRASCIYGYPILKERENGIVGQAEHTILITEN 287
>gi|3877451|emb|CAB03119| (Z81086) Similarity to Rat initiation factor 2 associated
glycoprotein (SW:I2A6_RAT) [Caenorhabditis elegans]
Length = 201
Score = 66.7 bits (160), Expect = 2e-10
Identities = 43/111 (38%), Positives = 58/111 (51%), Gaps = 4/111 (3%)
Query: 829 SSYEVDGKMVPVKSVKNLTGHSIEQFKIHGGVAIPIIDNGDETKLKADMFYACETFVTTG 650
S E G VK + +L G SI Q +IH +PI+ G++ +++ + YA ETF +TG
Sbjct: 26 SKCEFHGNSNEVKPIGSLNGQSIAQCRIHTEKTVPIVKGGEQARMEENEIYAIETFGSTG 85
Query: 649 NGVVRDAENCSHYM----LEDSKRYMVKNANSKKVLQAILKNVGTLPFSPRDIDR 497
G D SHYM L D K ++ SK +L I KN TL F IDR
Sbjct: 86 KGYFHDDMETSHYMKNFELADEK-IPLRLQKSKGLLNLIDKNFATLAFCRCWIDR 139
>gi|1408266 (U61403) PrlA [Dictyostelium discoideum]
Length = 379
Score = 58.2 bits (138), Expect = 8e-08
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 6/166 (3%)
Query: 871 VRVCDIGKEIEEVVSSYEVDGKMVPVKSVKNLTGHSIEQFKIHGGVAIPIIDNGDETKLK 692
+R+ GK EV E M V SV + H +++F I G I N K++
Sbjct: 154 LRMIRPGKTSNEVTQVIEKISDMYGVTSVSGILSHELKRFIIDGEKVI-FSKNEPSQKIQ 212
Query: 691 ADMF-----YACETFVTTGNGVVRD-AENCSHYMLEDSKRYMVKNANSKKVLQAILKNVG 530
F Y + ++TG G R+ A+ + Y Y +K+ S+ I+K
Sbjct: 213 TYEFQENEVYCIDIVMSTGEGKAREEADRPTIYRRNLDSTYKLKSKASRDFKDQIVKRYS 272
Query: 529 TLPFSPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHT 374
LPF R+ D V+ G + L ++L AYP L D G +V QF+ T
Sbjct: 273 ALPFPLRNFDEKVSKLG-----LVELVEHQVLAAYPVLFDRSGCEVVQFKTT 319
>gi|1657617 (U72503) G2p [Arabidopsis thaliana] >gi|3068707 (AF049236) putative
nuclear DNA-binding protein G2p [Arabidopsis thaliana]
Length = 392
Score = 51.2 bits (120), Expect = 1e-05
Identities = 40/174 (22%), Positives = 81/174 (45%), Gaps = 6/174 (3%)
Query: 859 DIGKEIEEVVSSYEVDGKMVPVKSVKNLTGHSIEQFKIHGGVAIPIIDNG----DETKLK 692
D+ + I++V ++Y+ K V+ + H ++Q I G + + + DE + +
Sbjct: 164 DVTEAIQKVAAAYDC-------KIVEGVLSHQLKQHVIDGNKVVLSVSSPETTVDEVEFE 216
Query: 691 ADMFYACETFVTTGNGVVR--DAENCSHYMLEDSKRYMVKNANSKKVLQAILKNVGTLPF 518
+ YA + +TG+G + D + + Y ++S Y +K S+ ++ I +N +PF
Sbjct: 217 ENEVYAIDIVASTGDGKPKLLDEKQTTIYKKDESVNYQLKMKASRFIISEIKQNFPRMPF 276
Query: 517 SPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHTCYLSESSKITLT 338
+ R ++ G + + L+ YP L + G VAQ + T L + +T
Sbjct: 277 TARSLEEKRARLG-----LVECVNHGHLQPYPVLYEKPGDFVAQIKFTVLLMPNGSDRIT 331
>gi|2511541 (AF020787) DNA-binding protein GBP16 [Oryza sativa]
Length = 393
Score = 50.0 bits (117), Expect = 2e-05
Identities = 41/172 (23%), Positives = 80/172 (45%), Gaps = 8/172 (4%)
Query: 859 DIGKEIEEVVSSYEVDGKMVPVKSVKNLTGHSIEQFKIHGGVAIPIIDNG----DETKLK 692
D+ + I++V ++Y+ SV+ + H ++QF I G + + N D+ + +
Sbjct: 165 DVTEAIQKVAAAYDS-------VSVEGVLSHQLKQFVIDGNKVVLSVSNADTKVDDAEFE 217
Query: 691 ADMFYACETFVTTGNGVVR--DAENCSHYMLEDSKRYMVKNANSKKVLQAILKNVGTLPF 518
+ YA + +TG G + D + + Y K Y +K S+ + I + +PF
Sbjct: 218 ENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKNYHLKMKASRFIFSEISQKFPIMPF 277
Query: 517 SPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHTCYL--SESSKIT 344
+ R ++ G + + +L+ YP L++ G VA + T L S S ++T
Sbjct: 278 TARALEEKRARLG-----LVECMNHELLQPYPVLHEKPGDLVAHIKFTVLLLPSGSQRVT 332
>gi|1709587|sp|P50580|PLS1_MOUSE PROLIFERATION-ASSOCIATED PROTEIN 1 (PROTEIN P38-2G4) >gi|1167967
(U43918) proliferation-associated protein 1 [Mus
musculus]
Length = 394
Score = 48.8 bits (114), Expect = 5e-05
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 9/185 (4%)
Query: 886 CIAVDVRVCDIGKEIEEVVSSYEVDGKMVPVKSVKNLTGHSIEQFKIHGGVAIPIIDNG- 710
C +R+ G + +V ++ ++ + H ++Q I G I I N
Sbjct: 149 CAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLKQHVIDGEKTI--IQNPT 206
Query: 709 -------DETKLKADMFYACETFVTTGNGVVRDA-ENCSHYMLEDSKRYMVKNANSKKVL 554
++ + + YA + V++G G +DA + + Y + SK+Y +K S+
Sbjct: 207 DQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIYKRDPSKQYGLKMKTSRAFF 266
Query: 553 QAILKNVGTLPFSPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHT 374
+ + +PF+ R + + G + A +L+ + L + +G VAQF+ T
Sbjct: 267 SEVERRFDAMPFTLRAFEDEKKARMG----VVECAKHELLQPFNVLYEKEGEFVAQFKFT 322
Query: 373 CYLSESSKITLTRG 332
L + + +T G
Sbjct: 323 VLLMPNGPMRITSG 336
>gi|2697005 (U59435) cell cycle protein p38-2G4 homolog [Homo sapiens]
Length = 394
Score = 48.8 bits (114), Expect = 5e-05
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 9/185 (4%)
Query: 886 CIAVDVRVCDIGKEIEEVVSSYEVDGKMVPVKSVKNLTGHSIEQFKIHGGVAIPIIDNG- 710
C +R+ G + +V ++ ++ + H ++Q I G I I N
Sbjct: 149 CAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLKQHVIDGEKTI--IQNPT 206
Query: 709 -------DETKLKADMFYACETFVTTGNGVVRDA-ENCSHYMLEDSKRYMVKNANSKKVL 554
++ + + YA + V++G G +DA + + Y + SK+Y +K S+
Sbjct: 207 DQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIYKRDPSKQYGLKMKTSRAFF 266
Query: 553 QAILKNVGTLPFSPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHT 374
+ + +PF+ R + + G + A +L+ + L + +G VAQF+ T
Sbjct: 267 SEVERRFDAMPFTLRAFEDEKKARMG----VVECAKHELLQPFNVLYEKEGEFVAQFKFT 322
Query: 373 CYLSESSKITLTRG 332
L + + +T G
Sbjct: 323 VLLMPNGPMRITSG 336
>gi|4160449 (AF104670) cell cycle protein [Homo sapiens]
Length = 394
Score = 48.8 bits (114), Expect = 5e-05
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 9/185 (4%)
Query: 886 CIAVDVRVCDIGKEIEEVVSSYEVDGKMVPVKSVKNLTGHSIEQFKIHGGVAIPIIDNG- 710
C +R+ G + +V ++ ++ + H ++Q I G I I N
Sbjct: 149 CAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLKQHVIDGEKTI--IQNPT 206
Query: 709 -------DETKLKADMFYACETFVTTGNGVVRDA-ENCSHYMLEDSKRYMVKNANSKKVL 554
++ + + YA + V++G G +DA + + Y + SK+Y +K S+
Sbjct: 207 DQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIYKRDPSKQYGLKMKTSRAFF 266
Query: 553 QAILKNVGTLPFSPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHT 374
+ + +PF+ R + + G + A +L+ + L + +G VAQF+ T
Sbjct: 267 SEVERRFDAMPFTLRAFEDEKKARMG----VVECAKHELLQPFNVLYEKEGEFVAQFKFT 322
Query: 373 CYLSESSKITLTRG 332
L + + +T G
Sbjct: 323 VLLMPNGPMRITSG 336
>gi|1083448|pir||S54181 p38-2G4 protein - mouse >gi|790470|emb|CAA59260| (X84789) p38-2G4
[Mus musculus]
Length = 340
Score = 48.8 bits (114), Expect = 5e-05
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 9/185 (4%)
Query: 886 CIAVDVRVCDIGKEIEEVVSSYEVDGKMVPVKSVKNLTGHSIEQFKIHGGVAIPIIDNG- 710
C +R+ G + +V ++ ++ + H ++Q I G I I N
Sbjct: 95 CAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLKQHVIDGEKTI--IQNPT 152
Query: 709 -------DETKLKADMFYACETFVTTGNGVVRDA-ENCSHYMLEDSKRYMVKNANSKKVL 554
++ + + YA + V++G G +DA + + Y + SK+Y +K S+
Sbjct: 153 DQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIYKRDPSKQYGLKMKTSRAFF 212
Query: 553 QAILKNVGTLPFSPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHT 374
+ + +PF+ R + + G + A +L+ + L + +G VAQF+ T
Sbjct: 213 SEVERRFDAMPFTLRAFEDEKKARMG----VVECAKHELLQPFNVLYEKEGEFVAQFKFT 268
Query: 373 CYLSESSKITLTRG 332
L + + +T G
Sbjct: 269 VLLMPNGPMRITSG 282
>gi|4099506 (U87954) erbB3 binding protein EBP1 [Homo sapiens]
Length = 340
Score = 48.8 bits (114), Expect = 5e-05
Identities = 40/185 (21%), Positives = 81/185 (43%), Gaps = 9/185 (4%)
Query: 886 CIAVDVRVCDIGKEIEEVVSSYEVDGKMVPVKSVKNLTGHSIEQFKIHGGVAIPIIDNG- 710
C +R+ G + +V ++ ++ + H ++Q I G I I N
Sbjct: 95 CAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLKQHVIDGEKTI--IQNPT 152
Query: 709 -------DETKLKADMFYACETFVTTGNGVVRDA-ENCSHYMLEDSKRYMVKNANSKKVL 554
++ + + YA + V++G G +DA + + Y + SK+Y +K S+
Sbjct: 153 DQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIYKRDPSKQYGLKMKTSRAFF 212
Query: 553 QAILKNVGTLPFSPRDIDRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHT 374
+ + +PF+ R + + G + A +L+ + L + +G VAQF+ T
Sbjct: 213 SEVERRFDAMPFTLRAFEDEKKARMG----VVECAKHELLQPFNVLYEKEGEFVAQFKFT 268
Query: 373 CYLSESSKITLTRG 332
L + + +T G
Sbjct: 269 VLLMPNGPMRITSG 282
>gi|1168857|sp|Q09184|CDB4_SCHPO CURVED DNA-BINDING PROTEIN (42 KD PROTEIN) >gi|1076863|pir||S46583
42K protein - fission yeast (Schizosaccharomyces pombe)
>gi|829085|dbj|BAA03607| (D14907) 42K-protein
[Schizosaccharomyces pombe] >gi|2388928|emb|CAB11663|
(Z98977) curved dna-binding protein [Schizosaccharomyces
pombe]
Length = 381
Score = 44.1 bits (102), Expect = 0.001
Identities = 42/152 (27%), Positives = 67/152 (43%), Gaps = 8/152 (5%)
Query: 793 KSVKNLTGHSIEQFKIHGGVAIPIIDNGDETKLKADMF-------YACETFVTTG-NGVV 638
K V + H E+ I G + I++ D + + D F Y + V+T +G V
Sbjct: 182 KPVAGMLSHQQEREVIDGKKQV-ILNPSDSQRSEMDTFTFEEGEVYGVDILVSTSPSGKV 240
Query: 637 RDAENCSHYMLEDSKRYMVKNANSKKVLQAILKNVGTLPFSPRDIDRYVTVKGGSYPFIK 458
+ ++ + + YM+K S+KV I G PFS R+I G +
Sbjct: 241 KRSDIATRIYKKTDTTYMLKLQASRKVYSEIQTKFGPFPFSTRNISFDSRTNMG----LN 296
Query: 457 TLASLRILEAYPPLNDSKGSKVAQFEHTCYLSESSKITLT 338
S ++L Y L D G VA+F T L++ I L+
Sbjct: 297 ECTSHKLLFPYEVLLDKDGGIVAEFYSTIALTKKGTIILS 336
>gi|141441|sp|P22624|AMPM_METFE PROBABLE METHIONINE AMINOPEPTIDASE (MAP) (PEPTIDASE M)
>gi|80949|pir||PS0039 methionyl aminopeptidase (EC
3.4.11.18) - Methanothermus fervidus (fragment)
>gi|551896 (M26978) ORF4 [Methanothermus fervidus]
Length = 188
Score = 37.1 bits (84), Expect = 0.17
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 871 VRVCDIGKEIEEVVSSYEVDGKMVPVKSVKNLTGHSIEQFKIHGGVAIPIIDNGDETKL 695
V + IG+ IE ++ + K + NLTGH+I+++ +H G++IP + + KL
Sbjct: 137 VEIGKIGEVIENTINKFGF-------KPISNLTGHTIDRWVLHSGLSIPNVKGQNSHKL 188
>gi|3861323|emb|CAA15222| (AJ235273) NADH DEHYDROGENASE I CHAIN H (nuoH) [Rickettsia
prowazekii]
Length = 339
Score = 33.6 bits (75), Expect = 1.9
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 408 LSFSGGYASKILKDA---NVLINGYEPPFTVTYLSISRGENGKVPTFFKIACNT-FLLFA 575
L F G YA+ IL A + + GY PPF +++L +P FF FLLF
Sbjct: 239 LFFLGEYANMILVSAMTTTLFLGGYLPPFNLSFLDC-------IPGFFWFVFKVGFLLFC 291
Query: 576 FLTI 587
FL I
Sbjct: 292 FLWI 295
>gi|139137|sp|P20951|RRPO_PMV RNA REPLICATION PROTEIN (176 KD PROTEIN) (ORF 1) [CONTAINS:
RNA-DIRECTED RNA POLYMERASE ; PROBABLE HELICASE]
>gi|77367|pir||JQ0096 hypothetical 176K protein - papaya
mosaic virus >gi|222331|dbj|BAA03050| (D13957) ORF1 (176K
protein) [Papaya mosaic virus]
Length = 1547
Score = 32.5 bits (72), Expect = 4.3
Identities = 22/63 (34%), Positives = 31/63 (48%), Gaps = 1/63 (1%)
Query: 514 PRDI-DRYVTVKGGSYPFIKTLASLRILEAYPPLNDSKGSKVAQFEHTCYLSESSKITLT 338
P DI D Y+T+K S F+ TLA +R+ P + + +A F HT + L
Sbjct: 1356 PEDILDAYLTIKTNSKIFLGTLAIMRLTGEGPTFDANTECNIA-FTHTKFNIPEGTAQLY 1414
Query: 337 RGDD 326
GDD
Sbjct: 1415 AGDD 1418
>gi|2983061 (AE000687) putative protein [Aquifex aeolicus]
Length = 301
Score = 32.5 bits (72), Expect = 4.3
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 853 GKEIEEVVSSYEVD-GKMVP--VKSVKNLTGHSIEQFKIHGGVAIPIIDNGDETKLKADM 683
G+E+ + + E+ +P K++ NLT + + G V ++DNG E K +M
Sbjct: 20 GQEVVKTARNLEIKITSQIPEVYKTLLNLTKVKAKVLRNRGNVITLLLDNGIEINAKNEM 79
Query: 682 FYACETFVTTGNGVVRDAENCSHYMLEDSKRYMVKNANSKKVLQAILKNVGTLPFSPRDI 503
+ + +VR EN + LE+ K VKN + +VL+ LKN+ FS I
Sbjct: 80 SVSLREGQSVVLTLVR--ENPLTFKLEEGK--FVKN-TTLEVLRKGLKNLKKFDFS--QI 132
Query: 502 DRYVTVK 482
+ Y K
Sbjct: 133 ENYENFK 139
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Apr 12, 1999 12:54 PM
Number of letters in database: 112,640,273
Number of sequences in database: 368,476
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 170724862
Number of Sequences: 368476
Number of extensions: 3486029
Number of successful extensions: 7130
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 7067
Number of HSP's gapped (non-prelim): 32
length of query: 300
length of database: 112640273
effective HSP length: 54
effective length of query: 245
effective length of database: 92742569
effective search space: 22721929405
effective search space used: 22721929405
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 69 (31.3 bits)