BLASTX 2.0.8 [Jan-05-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 14VII51R
(610 letters)
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
368,476 sequences; 112,640,273 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|2827552|emb|CAA16560| (AL021635) predicted protein [Arabidops... 66 2e-10
gi|3860313|emb|CAA10124| (AJ012683) hypothetical protein [Cicer ... 59 3e-08
gi|3845261 (AE001414) metal binding protein (DHHC domain) [Plasm... 59 4e-08
gi|466053|sp|P34679|YO41_CAEEL HYPOTHETICAL 68.7 KD PROTEIN ZK75... 57 1e-07
gi|3873666|emb|CAA93457| (Z69634) cDNA EST EMBL:C11678 comes fro... 56 2e-07
gi|470362 (U00046) weak similarity to ZK757.1 [Caenorhabditis el... 56 2e-07
gi|2252856 (AF013294) No definition line found [Arabidopsis thal... 56 2e-07
gi|3417417|emb|CAA20305| (AL031261) hypothetical protein [Schizo... 55 3e-07
gi|1176580|sp|P42836|YN66_YEAST HYPOTHETICAL 39.2 KD PROTEIN IN ... 55 4e-07
gi|2773183 (AF039720) No definition line found [Caenorhabditis e... 55 4e-07
gi|3402718 (AC004261) hypothetical protein [Arabidopsis thaliana] 55 5e-07
gi|3219912|sp|O14345|YB3F_SCHPO HYPOTHETICAL 38.1 KD PROTEIN C2F... 55 5e-07
gi|3874398|emb|CAB03897| (Z81473) cDNA EST yk435d2.5 comes from ... 54 9e-07
gi|1363741|pir||S59392 probable membrane protein YLR246w - yeast... 54 9e-07
gi|3947545|emb|CAB03898| (Z81473) cDNA EST EMBL:D75353 comes fro... 54 9e-07
gi|4220527|emb|CAA23000| (AL035356) putative protein [Arabidopsi... 53 1e-06
gi|2132817|pir||S61981 probable membrane protein YOL003c - yeast... 53 2e-06
gi|1255324 (U51999) C43H6.7 gene product [Caenorhabditis elegans] 53 2e-06
gi|1077581|pir||S52691 probable membrane protein YDR126w - yeast... 52 3e-06
gi|747900|emb|CAA88679| (Z48758) unknown [Saccharomyces cerevisiae] 52 3e-06
gi|3873647|emb|CAA94868| (Z71177) Similarity with 39.2kd yeast p... 52 4e-06
gi|3881079|emb|CAA21738| (AL032657) cDNA EST yk207f6.5 comes fro... 52 4e-06
gi|3877900|emb|CAB01873| (Z79600) Similarity with yeast hypothet... 51 8e-06
gi|1175373|sp|Q09701|YA2A_SCHPO HYPOTHETICAL 72.5 KD PROTEIN C2F... 50 1e-05
gi|3080532|emb|CAA18660| (AL022600) hypothetical protein [Schizo... 49 3e-05
gi|3845106 (AE001375) metal binding protein (DHHC domain) [Plasm... 48 4e-05
gi|2342647 (U90653) DHHC-domain-containing cysteine-rich protein... 47 9e-05
gi|3875664|emb|CAB05476| (Z83104) predicted using Genefinder [Ca... 47 1e-04
gi|1065487 (U40415) similar to C. elegans hypothetical protein C... 46 2e-04
gi|4226075 (AF125443) contains similarity to ankyrin repeats (PF... 42 0.004
gi|665658|emb|CAA88207| (Z48179) unknown [Saccharomyces cerevisiae] 39 0.020
gi|746482 (U23513) D2021.2 [Caenorhabditis elegans] 38 0.060
gi|2244865|emb|CAB10287| (Z97337) hypothetical protein [Arabidop... 38 0.078
gi|3859602 (AF104919) contains similarity to human DHHC-domain-c... 37 0.10
gi|2131507|pir||S69627 hypothetical protein YDR459c - yeast (Sac... 37 0.13
gi|2459444 (AC002332) hypothetical protein [Arabidopsis thaliana] 32 2.6
gi|3845144 (AE001385) hypothetical protein [Plasmodium falciparum] 31 5.9
>gi|2827552|emb|CAA16560| (AL021635) predicted protein [Arabidopsis thaliana]
Length = 820
Score = 66.0 bits (158), Expect = 2e-10
Identities = 25/47 (53%), Positives = 31/47 (65%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIF 15
C CN YKPPRSHHCS C +C LKMDHHC + C+ + F++F
Sbjct: 642 CRKCNQYKPPRSHHCSVCGRCILKMDHHCVWVVNCVGANNYKSFLLF 688
>gi|3860313|emb|CAA10124| (AJ012683) hypothetical protein [Cicer arietinum]
Length = 93
Score = 58.9 bits (140), Expect = 3e-08
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 146 CNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIF 15
C KPPR HHCS C++C LKMDHHC + C+ + +F++F
Sbjct: 2 CQNGKPPRCHHCSICQRCVLKMDHHCIWVVNCVGARNYKYFLLF 45
>gi|3845261 (AE001414) metal binding protein (DHHC domain) [Plasmodium
falciparum]
Length = 101
Score = 58.6 bits (139), Expect = 4e-08
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFII 18
C CN K RSHHCS C KC +KMDHHCF + +C+ +FI+
Sbjct: 38 CKKCNLLKIKRSHHCSVCDKCIMKMDHHCFWINSCVGLYNQKYFIL 83
>gi|466053|sp|P34679|YO41_CAEEL HYPOTHETICAL 68.7 KD PROTEIN ZK757.1 IN CHROMOSOME III
>gi|482217|pir||S41011 hypothetical protein ZK757.1 -
Caenorhabditis elegans >gi|3881771|emb|CAA82387|
(Z29121) ZK757.1 [Caenorhabditis elegans]
Length = 589
Score = 56.6 bits (134), Expect = 1e-07
Identities = 22/47 (46%), Positives = 28/47 (58%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIF 15
C+ C KP RSHHCS C +C LK DHHC + C+ +FI+F
Sbjct: 440 CDKCCCIKPDRSHHCSMCEQCVLKFDHHCPWVNNCVNFGNYKYFILF 486
>gi|3873666|emb|CAA93457| (Z69634) cDNA EST EMBL:C11678 comes from this gene; cDNA EST
EMBL:C13926 comes from this gene; cDNA EST yk211g12.3
comes from this gene; cDNA EST yk211g12.5 comes from
this gene; cDNA EST yk362e5.3 comes from this gene; cDNA
ES... >gi|3878711|emb|CAA92831| (Z68507) cDNA EST
EMBL:C11678 comes from this gene; cDNA EST EMBL:C13926
comes from this gene; cDNA EST yk211g12.3 comes from
this gene; cDNA EST yk211g12.5 comes from this gene;
cDNA EST yk362e5.3 comes from this gene; cDNA ES...
Length = 447
Score = 56.2 bits (133), Expect = 2e-07
Identities = 22/49 (44%), Positives = 30/49 (60%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIFWY 9
C CN +K PRSHHCS C +C +KMDHHC + C+ +F+ F +
Sbjct: 108 CVPCNGFKVPRSHHCSKCDRCCMKMDHHCPWINNCVGHRNHQYFLRFLF 156
>gi|470362 (U00046) weak similarity to ZK757.1 [Caenorhabditis elegans]
Length = 210
Score = 55.8 bits (132), Expect = 2e-07
Identities = 23/47 (48%), Positives = 28/47 (58%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIF 15
C +CN KPPR HHC C C +MDHHC L CI S +F++F
Sbjct: 84 CQLCNYRKPPRWHHCRRCNLCVHRMDHHCPILQLCIHSGNHKYFLLF 130
>gi|2252856 (AF013294) No definition line found [Arabidopsis thaliana]
Length = 262
Score = 55.8 bits (132), Expect = 2e-07
Identities = 23/49 (46%), Positives = 31/49 (62%), Gaps = 10/49 (20%)
Query: 155 CNVCNTYKPPRSHHCSFCR----------KCYLKMDHHCFPLGTCILSTIINFFIIFWY 9
C C KPPR HHCS C+ +C LKMDHHC + C+ + FF++F +
Sbjct: 48 CTKCRNVKPPRCHHCSVCKAKSDLFILCQRCVLKMDHHCVWIVNCVGARNYKFFLLFLF 106
>gi|3417417|emb|CAA20305| (AL031261) hypothetical protein [Schizosaccharomyces pombe]
Length = 350
Score = 55.4 bits (131), Expect = 3e-07
Identities = 21/50 (42%), Positives = 28/50 (56%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIFWYS 6
C+ C+ Y+PPR+ HC C C +DHHC L TCI ++ IF S
Sbjct: 184 CHTCHLYRPPRASHCHLCDNCVEYLDHHCIWLNTCIGRRNYRYYFIFLLS 233
>gi|1176580|sp|P42836|YN66_YEAST HYPOTHETICAL 39.2 KD PROTEIN IN EGT2-KRE1 INTERGENIC REGION
>gi|1362346|pir||S55863 probable membrane protein
YNL326c - yeast (Saccharomyces cerevisiae)
>gi|633660|emb|CAA86372| (Z46259) N0325 [Saccharomyces
cerevisiae] >gi|1302443|emb|CAA96258| (Z71602) ORF
YNL326c [Saccharomyces cerevisiae]
Length = 336
Score = 55.0 bits (130), Expect = 4e-07
Identities = 24/47 (51%), Positives = 26/47 (55%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIF 15
C VC+ +KP R HHCS C C LKMDHHC C FFI F
Sbjct: 106 CQVCHVWKPDRCHHCSSCDVCILKMDHHCPWFAECTGFRNQKFFIQF 152
>gi|2773183 (AF039720) No definition line found [Caenorhabditis elegans]
Length = 885
Score = 55.0 bits (130), Expect = 4e-07
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIF 15
C C + KP R+HHCS C +C +MDHHC + C+ FF++F
Sbjct: 86 CQKCASIKPDRAHHCSVCERCIRRMDHHCPWVNNCVGEGNQKFFVLF 132
>gi|3402718 (AC004261) hypothetical protein [Arabidopsis thaliana]
Length = 340
Score = 54.7 bits (129), Expect = 5e-07
Identities = 22/43 (51%), Positives = 28/43 (64%), Gaps = 1/43 (2%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCI-LSTIINF 27
C+ C Y+PPR+ HCS C C + DHHC +G CI L+T NF
Sbjct: 166 CDTCLLYRPPRASHCSICNNCVQRFDHHCPWVGQCIALTTYENF 209
>gi|3219912|sp|O14345|YB3F_SCHPO HYPOTHETICAL 38.1 KD PROTEIN C2F12.15C IN CHROMOSOME II
>gi|2239244|emb|CAB10162| (Z97211) hypothetical protein
[Schizosaccharomyces pombe]
Length = 329
Score = 54.7 bits (129), Expect = 5e-07
Identities = 22/46 (47%), Positives = 25/46 (53%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFII 18
C C YK RSHHCS C KC L+MDHHC C+ FF +
Sbjct: 99 CEKCQEYKCDRSHHCSQCNKCILRMDHHCMWFKNCVGFRNHKFFFL 144
>gi|3874398|emb|CAB03897| (Z81473) cDNA EST yk435d2.5 comes from this gene; cDNA EST
yk232f11.3 comes from this gene; cDNA EST yk232f11.5
comes from this gene; cDNA EST yk265e1.5 comes from this
gene; cDNA EST yk435d2.3 comes from this gene
[Caenorhabdi...
Length = 302
Score = 53.9 bits (127), Expect = 9e-07
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 254 PHIQSDKIEVSLEDVNPFVEQEXXXXXXXXXXICNVCNTYKPPRSHHCSFCRKCYLKMDH 75
P SD+ + S E+ F +C C++ +PPR+HHC C++C KMDH
Sbjct: 83 PVFSSDEEDESDEEA-VFRHDHLNRSSATEWTMCTRCDSLRPPRAHHCRVCKRCVRKMDH 141
Query: 74 HCFPLGTCI 48
HC + C+
Sbjct: 142 HCPWVNNCV 150
>gi|1363741|pir||S59392 probable membrane protein YLR246w - yeast (Saccharomyces
cerevisiae) >gi|662337 (U20865) Ylr246wp [Saccharomyces
cerevisiae]
Length = 359
Score = 53.9 bits (127), Expect = 9e-07
Identities = 21/47 (44%), Positives = 26/47 (54%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIF 15
C C ++PPRS HCS C C + DHHC + CI FF+IF
Sbjct: 175 CPSCRIWRPPRSSHCSTCNVCVMVHDHHCIWVNNCIGKRNYRFFLIF 221
>gi|3947545|emb|CAB03898| (Z81473) cDNA EST EMBL:D75353 comes from this gene; cDNA EST
EMBL:D72468 comes from this gene [Caenorhabditis
elegans]
Length = 240
Score = 53.9 bits (127), Expect = 9e-07
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 254 PHIQSDKIEVSLEDVNPFVEQEXXXXXXXXXXICNVCNTYKPPRSHHCSFCRKCYLKMDH 75
P SD+ + S E+ F +C C++ +PPR+HHC C++C KMDH
Sbjct: 21 PVFSSDEEDESDEEA-VFRHDHLNRSSATEWTMCTRCDSLRPPRAHHCRVCKRCVRKMDH 79
Query: 74 HCFPLGTCI 48
HC + C+
Sbjct: 80 HCPWVNNCV 88
>gi|4220527|emb|CAA23000| (AL035356) putative protein [Arabidopsis thaliana]
Length = 374
Score = 53.5 bits (126), Expect = 1e-06
Identities = 20/47 (42%), Positives = 26/47 (54%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIF 15
C+ C Y+PPR HCS C C + DHHC +G CI +F +F
Sbjct: 138 CDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMF 184
>gi|2132817|pir||S61981 probable membrane protein YOL003c - yeast (Saccharomyces
cerevisiae) >gi|1150993 (U43491) hypothetical protein
UNE378 [Saccharomyces cerevisiae]
>gi|1419765|emb|CAA99002| (Z74745) ORF YOL003c
[Saccharomyces cerevisiae]
Length = 378
Score = 53.1 bits (125), Expect = 2e-06
Identities = 22/48 (45%), Positives = 27/48 (55%), Gaps = 2/48 (4%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFI--IFW 12
C C +YKP RSHHC C +C L MDHHC C+ F+ +FW
Sbjct: 80 CKKCQSYKPERSHHCKTCNQCVLMMDHHCPWTMNCVGFANYPHFLRFLFW 129
>gi|1255324 (U51999) C43H6.7 gene product [Caenorhabditis elegans]
Length = 306
Score = 52.7 bits (124), Expect = 2e-06
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCI 48
C+ CN +K +HHCS C KC L MDHHC + C+
Sbjct: 105 CSKCNYWKSDNAHHCSVCEKCVLGMDHHCIWINQCV 140
>gi|1077581|pir||S52691 probable membrane protein YDR126w - yeast (Saccharomyces
cerevisiae)
Length = 336
Score = 52.3 bits (123), Expect = 3e-06
Identities = 22/51 (43%), Positives = 26/51 (50%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIFWYSN 3
C+ C KP RS HCS C +C L DHHC + CI F +F SN
Sbjct: 136 CSTCRIVKPARSKHCSICNRCVLVADHHCIWINNCIGKGNYLQFYLFLISN 186
>gi|747900|emb|CAA88679| (Z48758) unknown [Saccharomyces cerevisiae]
Length = 264
Score = 52.3 bits (123), Expect = 3e-06
Identities = 22/51 (43%), Positives = 26/51 (50%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIFWYSN 3
C+ C KP RS HCS C +C L DHHC + CI F +F SN
Sbjct: 136 CSTCRIVKPARSKHCSICNRCVLVADHHCIWINNCIGKGNYLQFYLFLISN 186
>gi|3873647|emb|CAA94868| (Z71177) Similarity with 39.2kd yeast protein (Swiss Prot accession
number P42836) [Caenorhabditis elegans]
Length = 600
Score = 51.9 bits (122), Expect = 4e-06
Identities = 22/49 (44%), Positives = 29/49 (58%), Gaps = 9/49 (18%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCI---------LSTIINFFIIFWY 9
C C KP R+ HCS C KC +K DHHC + C+ L I F+++WY
Sbjct: 405 CYECGHIKPDRARHCSSCGKCCIKYDHHCPWINMCVTHVNYKYFLLYIIYTSFLVYWY 462
>gi|3881079|emb|CAA21738| (AL032657) cDNA EST yk207f6.5 comes from this gene; cDNA EST
yk201f11.5 comes from this gene; cDNA EST yk207f6.3
comes from this gene [Caenorhabditis elegans]
Length = 368
Score = 51.9 bits (122), Expect = 4e-06
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCI 48
C C Y+PPR HC+ C C L DHHC +G CI
Sbjct: 166 CTTCRLYRPPRCSHCAICDNCVLMFDHHCPWVGNCI 201
>gi|3877900|emb|CAB01873| (Z79600) Similarity with yeast hypothetical protein C2F7.10 (Swiss
Prot accession number Q09701) [Caenorhabditis elegans]
Length = 239
Score = 50.8 bits (119), Expect = 8e-06
Identities = 19/49 (38%), Positives = 28/49 (56%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIFWY 9
C CN +K P + HC C KC +MDHHC +G C+ + + F +F +
Sbjct: 42 CIKCNNWKGPSTSHCKACDKCIYRMDHHCPHIGQCVGAHNQSHFFLFLF 90
>gi|1175373|sp|Q09701|YA2A_SCHPO HYPOTHETICAL 72.5 KD PROTEIN C2F7.10 IN CHROMOSOME I
>gi|2130379|pir||S58154 hypothetical protein SPAC2F7.10
- fission yeast (Schizosaccharomyces pombe)
>gi|1052793|emb|CAA90497| (Z50142) unknown
[Schizosaccharomyces pombe]
Length = 642
Score = 50.0 bits (117), Expect = 1e-05
Identities = 24/49 (48%), Positives = 33/49 (66%), Gaps = 16/49 (32%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCI--------------LSTI--INFF 24
C C KPPRS+HC C++C + DHHC G C+ LST+ I F+
Sbjct: 402 CLKCFQVKPPRSYHCGACKRCINRYDHHCPWTGNCVGARNHRTFLLFVFTLSTLIPIYFY 461
Query: 23 IIFWY 9
+ F+Y
Sbjct: 462 VAFYY 466
>gi|3080532|emb|CAA18660| (AL022600) hypothetical protein [Schizosaccharomyces pombe]
Length = 356
Score = 48.8 bits (114), Expect = 3e-05
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIF 15
C+ C KP RS HC C C K DHHC + C+ +F +F
Sbjct: 160 CSTCKFEKPARSKHCRLCNICVEKFDHHCIWINNCVGLNNARYFFLF 206
>gi|3845106 (AE001375) metal binding protein (DHHC domain) [Plasmodium
falciparum]
Length = 78
Score = 48.4 bits (113), Expect = 4e-05
Identities = 18/43 (41%), Positives = 25/43 (57%)
Query: 143 NTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIF 15
N +P RS HCS+C C + DHHCF L CI ++++F
Sbjct: 10 NPIRPARSKHCSYCSSCISRYDHHCFLLNNCIGGYNNMYYLVF 52
>gi|2342647 (U90653) DHHC-domain-containing cysteine-rich protein [Homo
sapiens]
Length = 217
Score = 47.3 bits (110), Expect = 9e-05
Identities = 18/36 (50%), Positives = 20/36 (55%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCI 48
CN+CN RS HCS C KC DHHC L C+
Sbjct: 136 CNLCNVDVSARSKHCSACNKCVCGFDHHCKWLNNCV 171
>gi|3875664|emb|CAB05476| (Z83104) predicted using Genefinder [Caenorhabditis elegans]
Length = 295
Score = 46.9 bits (109), Expect = 1e-04
Identities = 19/46 (41%), Positives = 29/46 (62%), Gaps = 8/46 (17%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCI--------LSTIINFFII 18
C+ C++ P R+HHC C C L+ DHHC C+ ++ +IN FI+
Sbjct: 105 CHSCHSMSPLRAHHCPVCDVCILRRDHHCSFGAVCVGHFNQRYFVAAVINLFIM 158
>gi|1065487 (U40415) similar to C. elegans hypothetical protein C27F7.10
(SP:P34679) [Caenorhabditis elegans]
Length = 232
Score = 46.1 bits (107), Expect = 2e-04
Identities = 15/26 (57%), Positives = 18/26 (68%)
Query: 125 RSHHCSFCRKCYLKMDHHCFPLGTCI 48
RSHHC C+ C L+ DHHCF G C+
Sbjct: 78 RSHHCPLCKMCVLRKDHHCFITGACV 103
>gi|4226075 (AF125443) contains similarity to ankyrin repeats (PFam: PF00023,
score=77.6, E=2.5e-19, n=4) [Caenorhabditis elegans]
Length = 783
Score = 41.8 bits (96), Expect = 0.004
Identities = 18/47 (38%), Positives = 22/47 (46%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIF 15
C C K SHHCS C KC DHHC + C+ + F+ F
Sbjct: 543 CFTCWIPKTSSSHHCSQCDKCVDGFDHHCPWIHKCVYRKNLRAFVFF 589
>gi|665658|emb|CAA88207| (Z48179) unknown [Saccharomyces cerevisiae]
Length = 190
Score = 39.5 bits (90), Expect = 0.020
Identities = 17/40 (42%), Positives = 20/40 (49%)
Query: 122 SHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIFWYSN 3
S HCS C +C L DHHC + CI F +F SN
Sbjct: 1 SKHCSICNRCVLVADHHCIWINNCIGKGNYLQFYLFLISN 40
>gi|746482 (U23513) D2021.2 [Caenorhabditis elegans]
Length = 272
Score = 37.9 bits (86), Expect = 0.060
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIF 15
C C K + HC+ C C DHHC L +C+ + FI+F
Sbjct: 108 CFTCFIRKMDHTKHCAVCGFCVNNFDHHCPWLNSCVTRRNMREFIMF 154
>gi|2244865|emb|CAB10287| (Z97337) hypothetical protein [Arabidopsis thaliana]
Length = 736
Score = 37.5 bits (85), Expect = 0.078
Identities = 15/36 (41%), Positives = 17/36 (46%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCI 48
C +CN S HC C KC DHHC L C+
Sbjct: 176 CTLCNAEVRKFSKHCRSCDKCVDCFDHHCRWLNNCV 211
>gi|3859602 (AF104919) contains similarity to human DHHC-domain-containing
cysteine-rich protein (GB:U90653) and several S.
cerevisiae probable membrane proteins (GB:U20865,
Z48758, U43491) [Arabidopsis thaliana]
Length = 513
Score = 37.1 bits (84), Expect = 0.10
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFII 18
C++C+ S HC C +C DHHC L C+ FI+
Sbjct: 151 CSLCDLEVKRSSKHCRTCNRCVEGFDHHCRWLNNCVGKKNYTTFIL 196
>gi|2131507|pir||S69627 hypothetical protein YDR459c - yeast (Saccharomyces cerevisiae)
>gi|927749 (U33050) Ydr459cp; CAI: 0.12 [Saccharomyces
cerevisiae]
Length = 374
Score = 36.7 bits (83), Expect = 0.13
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 155 CNVCNTYKPPRSHHCSFCRKCYLKMDHHCFPLGTCILSTIINFFIIF 15
C+ C + K R+HH S C + DH+C +GT I F+ F
Sbjct: 131 CSECQSLKMERTHHSSELGHCIPRFDHYCMWIGTVIGRDNYRLFVQF 177
>gi|2459444 (AC002332) hypothetical protein [Arabidopsis thaliana]
Length = 567
Score = 32.5 bits (72), Expect = 2.6
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 6/36 (16%)
Query: 155 CNVCNT----YKPPR--SHHCSFCRKCYLKMDHHCFPLGTCI 48
C++CN + R S HC C KC DHHC L C+
Sbjct: 132 CSLCNAEHILFLKVRMFSKHCRSCGKCVDGFDHHCRWLNNCV 173
>gi|3845144 (AE001385) hypothetical protein [Plasmodium falciparum]
Length = 1436
Score = 31.3 bits (69), Expect = 5.9
Identities = 24/75 (32%), Positives = 37/75 (49%)
Query: 343 NNIMSNTLSNL*SSIQYNPTNTYDRYIVITGIIEDINRRIKFLRIIFPSNMLDYNLKK*K 522
NN+ S+ +N+ SS+ N N +R +V II ++NR + + I SN+L N
Sbjct: 330 NNMTSSMTNNMTSSMTNNMLNNMNR-VVTNNIITNMNRSVSGSKSINMSNLLIINK---- 384
Query: 523 NQTLXFVDI*NIIYH 567
+D N IYH
Sbjct: 385 ------MDYGNDIYH 393
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Apr 12, 1999 12:54 PM
Number of letters in database: 112,640,273
Number of sequences in database: 368,476
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98202108
Number of Sequences: 368476
Number of extensions: 1700713
Number of successful extensions: 4254
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4185
Number of HSP's gapped (non-prelim): 49
length of query: 203
length of database: 112640273
effective HSP length: 53
effective length of query: 149
effective length of database: 93111045
effective search space: 13873545705
effective search space used: 13873545705
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 67 (30.5 bits)