BLASTX 2.0.8 [Jan-05-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 14VII-6R
(762 letters)
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
369,800 sequences; 113,023,754 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|1171589|emb|CAA64574| (X95275) frameshift [Plasmodium falcipa... 35 0.53
gi|2507061|sp|P32489|MEI5_YEAST MEIOSIS PROTEIN 5 >gi|2132336|pi... 35 0.69
gi|4115789|dbj|BAA36527| (D89861) cytochrome C-type biogenesis p... 33 2.0
gi|1346789|sp|P03864|PRE3_STAAU PLASMID RECOMBINATION ENZYME (MO... 33 2.7
gi|1052999 (U38428) recombination protein [Staphylococcus aureus] 33 2.7
gi|76319|pir||QQSA8T hypothetical protein B-189 - Staphylococcus... 33 2.7
gi|3041708|sp|P13540|MYSB_MESAU MYOSIN HEAVY CHAIN, CARDIAC MUSC... 32 3.5
gi|3874633|emb|CAA92287| (Z68159) C33D9.6 [Caenorhabditis elegans] 32 3.5
gi|3845272 (AE001417) hypothetical protein [Plasmodium falciparum] 32 3.5
gi|477226|pir||A48426 heat shock protein HSP82 - maize >gi|30008... 32 4.6
gi|29727|emb|CAA37068| (X52889) cardiac beta myosin heavy chain ... 32 4.6
gi|729771|sp|Q08277|HS82_MAIZE HEAT SHOCK PROTEIN 82 32 4.6
gi|1698895 (U75316) beta-myosin heavy chain [Sus scrofa] 32 4.6
gi|2984005 (AE000750) ATPase subunit of ATP-dependent protease [... 32 4.6
gi|2746308 (AF037218) unknown [Human herpesvirus 7] 32 6.0
gi|2496111|sp|Q58135|Y725_METJA HYPOTHETICAL PROTEIN MJ0725 >gi|... 32 6.0
gi|1078798|pir||S54174 topoisomerase I - Plasmodium falciparum >... 32 6.0
gi|3426021|dbj|BAA32395| (AB016836) heat shock 70 kD protein cog... 32 6.0
gi|476355|pir||A46762 myosin alpha heavy chain, cardiac muscle -... 32 6.0
gi|340613 (L07545) A 'c' was inserted after nt 369 (=nt 10459 in... 32 6.0
gi|67985|pir||HJNVAV helicase (EC 3.6.1.-) - Autographa californ... 32 6.0
gi|1722830|sp|P52531|VU79_HSV7J PROTEIN U79 >gi|1139680 (U43400)... 32 6.0
gi|127740|sp|P04460|MYSA_RABIT MYOSIN HEAVY CHAIN, CARDIAC MUSCL... 31 7.8
gi|127748|sp|P02564|MYSB_RAT MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ... 31 7.8
gi|191618 (M76598) alpha cardiac myosin heavy chain [Mus musculus] 31 7.8
gi|3024204|sp|Q02566|MYSA_MOUSE MYOSIN HEAVY CHAIN, CARDIAC MUSC... 31 7.8
gi|127741|sp|P02563|MYSA_RAT MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ... 31 7.8
gi|2541912|dbj|BAA22851| (AB008004) troponin T [Patinopecten yes... 31 7.8
gi|3915779|sp|P13539|MYSA_MESAU MYOSIN HEAVY CHAIN, CARDIAC MUSC... 31 7.8
gi|2541910|dbj|BAA22850| (AB008003) troponin T [Patinopecten yes... 31 7.8
gi|423341|pir||S33732 myosin alpha heavy chain, masticatory musc... 31 7.8
>gi|1171589|emb|CAA64574| (X95275) frameshift [Plasmodium falciparum]
Length = 960
Score = 35.2 bits (79), Expect = 0.53
Identities = 25/76 (32%), Positives = 45/76 (58%), Gaps = 10/76 (13%)
Query: 747 YILYDIFVQKYLFYENFDKYLFKC-IQTNFFYYCYIL-NNCFFITCY*MLKDNIFL---- 586
Y+L + Y+ Y N+ KYL+K I N ++ + NN FI + + K+N ++
Sbjct: 607 YLLLNNKYNLYIIYNNYIKYLYKYNININLYFIKNLFYNNNNFIHNHIIYKNNYYIYNNN 666
Query: 585 ----RRNKIITKSNFLIFVKIFTSYL 520
+ NK I +N L++ K+F +Y+
Sbjct: 667 MNLYQYNKNILINNNLLYNKLFYNYI 692
>gi|2507061|sp|P32489|MEI5_YEAST MEIOSIS PROTEIN 5 >gi|2132336|pir||S62001 MEI5 protein - yeast
(Saccharomyces cerevisiae) >gi|1163093 (U43503)
Mei5p,Lph6p [Saccharomyces cerevisiae]
Length = 222
Score = 34.8 bits (78), Expect = 0.69
Identities = 31/91 (34%), Positives = 52/91 (57%), Gaps = 16/91 (17%)
Query: 59 CEFXXKRKYVEDEKSEXISKLRIIIE----YLENDN----------KDKFCEDRKIKKKR 196
C+ + K +E+ KS I K R I E ++ N KD ++ + KK+R
Sbjct: 79 CKILSENKIIENRKS--IEKWRTICEMELSFILNSTLIKINRMGGYKDFLEKEMEAKKRR 136
Query: 197 IEDVLK--LSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNXIEK 331
+E + + Q+ +IKES D R+ SEV++ E ++N +EK
Sbjct: 137 LEYQIDNGMEDQICEIKESDDFRQLSEVEK-QEWESQMNEQLKELEK 182
>gi|4115789|dbj|BAA36527| (D89861) cytochrome C-type biogenesis protein CCMF [Cyanidioschyzon
merolae]
Length = 620
Score = 33.2 bits (74), Expect = 2.0
Identities = 20/59 (33%), Positives = 31/59 (51%), Gaps = 9/59 (15%)
Query: 762 YLILFYILYDIFVQKYLFYE---------NFDKYLFKCIQTNFFYYCYILNNCFFITCY* 610
+L+ +IL I ++KY ++ NF Y+F + F Y ++L F I CY
Sbjct: 325 FLVFIFILIVILLKKYTYFTSIFDLNNHYNFVYYIFLLVILYFLYLLFVLYFPFLIKCY- 383
Query: 609 MLKDNIFL 586
DN L
Sbjct: 384 --NDNALL 389
>gi|1346789|sp|P03864|PRE3_STAAU PLASMID RECOMBINATION ENZYME (MOBILIZATION PROTEIN) >gi|151683
(J01764) Pre protein (plasmid recombination) [Plasmid
pT181]
Length = 413
Score = 32.8 bits (73), Expect = 2.7
Identities = 28/92 (30%), Positives = 48/92 (51%), Gaps = 7/92 (7%)
Query: 56 DCEFXXKRKYVEDEKSEXISK---LRIIIEYLEN--DNKDKFCEDRKIKKKRIEDVLKLS 220
D E+ + ++D+ E K L +E +EN DN ++ E+ K K+ IE LKL
Sbjct: 287 DYEYIKSGRALDDKDKEIREKDDLLNKAVERIENADDNFNQLYENAKPLKENIEIALKLL 346
Query: 221 FQLIKIKESIDLRKT--SEVKRINNEEDEINTHKNXIEK 331
L+K E + R T V ++ +E ++N ++K
Sbjct: 347 KILLKELERVLGRNTFAERVNKLTEDEPKLNGLAGNLDK 385
>gi|1052999 (U38428) recombination protein [Staphylococcus aureus]
Length = 413
Score = 32.8 bits (73), Expect = 2.7
Identities = 28/92 (30%), Positives = 48/92 (51%), Gaps = 7/92 (7%)
Query: 56 DCEFXXKRKYVEDEKSEXISK---LRIIIEYLEN--DNKDKFCEDRKIKKKRIEDVLKLS 220
D E+ + ++D+ E K L +E +EN DN ++ E+ K K+ IE LKL
Sbjct: 287 DYEYIKSGRALDDKDKEIREKDDLLNKAVERIENADDNFNQLYENAKPLKENIEIALKLL 346
Query: 221 FQLIKIKESIDLRKT--SEVKRINNEEDEINTHKNXIEK 331
L+K E + R T V ++ +E ++N ++K
Sbjct: 347 KILLKELERVLGRNTFAERVNKLTEDEPKLNGLAGNLDK 385
>gi|76319|pir||QQSA8T hypothetical protein B-189 - Staphylococcus aureus plasmid pT181
Length = 189
Score = 32.8 bits (73), Expect = 2.7
Identities = 28/92 (30%), Positives = 48/92 (51%), Gaps = 7/92 (7%)
Query: 56 DCEFXXKRKYVEDEKSEXISK---LRIIIEYLEN--DNKDKFCEDRKIKKKRIEDVLKLS 220
D E+ + ++D+ E K L +E +EN DN ++ E+ K K+ IE LKL
Sbjct: 63 DYEYIKSGRALDDKDKEIREKDDLLNKAVERIENADDNFNQLYENAKPLKENIEIALKLL 122
Query: 221 FQLIKIKESIDLRKT--SEVKRINNEEDEINTHKNXIEK 331
L+K E + R T V ++ +E ++N ++K
Sbjct: 123 KILLKELERVLGRNTFAGRVSKLTEDEPKLNGLAGNLDK 161
>gi|3041708|sp|P13540|MYSB_MESAU MYOSIN HEAVY CHAIN, CARDIAC MUSCLE BETA ISOFORM
>gi|2119308|pir||I48153 beta-myosin heavy chain - golden
hamster >gi|402372 (L12104) beta-myosin heavy chain
[Mesocricetus auratus] >gi|1581130|prf||2116354A beta
myosin:SUBUNIT=heavy chain [Mesocricetus auratus]
Length = 1934
Score = 32.5 bits (72), Expect = 3.5
Identities = 21/86 (24%), Positives = 43/86 (49%), Gaps = 2/86 (2%)
Query: 53 LDCEFXXKRKYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQ 226
++ E K++ +EDE SE + + L KDK + K+K + + + ++ +
Sbjct: 931 MNAELTAKKRKLEDECSELKRDIDDLELTLAKVEKDKHATENKVKNLTEEMAGLDEIIAK 990
Query: 227 LIKIKESIDLRKTSEVKRINNEEDEINT 310
L K K+++ + + EED++NT
Sbjct: 991 LTKEKKALQEAHQQALDDLQAEEDKVNT 1018
>gi|3874633|emb|CAA92287| (Z68159) C33D9.6 [Caenorhabditis elegans]
Length = 790
Score = 32.5 bits (72), Expect = 3.5
Identities = 15/63 (23%), Positives = 35/63 (54%)
Query: 146 NDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNXI 325
ND + E+ K+K K++E+ + + +K+KE+ L+ T ++ + + E + N +
Sbjct: 578 NDQIEMIFENNKLKTKKLEENYRNAKDQLKLKEAHHLKLTQRIEDLEKKLAEKDERLNYL 637
Query: 326 EKM 334
E++
Sbjct: 638 EQL 640
>gi|3845272 (AE001417) hypothetical protein [Plasmodium falciparum]
Length = 980
Score = 32.5 bits (72), Expect = 3.5
Identities = 20/65 (30%), Positives = 34/65 (51%)
Query: 143 ENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNX 322
E ++K K ED ++KK+ + LK IK K + T+E+ ++N+ +E+N
Sbjct: 382 EKEDKIKNLEDDLLEKKKCIENLKDELINIKKKMEDKMHMTNEMDLLSNKVEELNRINKT 441
Query: 323 IEKMI 337
EK I
Sbjct: 442 YEKNI 446
>gi|477226|pir||A48426 heat shock protein HSP82 - maize >gi|300083|bbs|130886 (S59780)
HSP82=82 kda heat shock protein [Zea mays, seedling,
leaves, Peptide, 715 aa] [Zea mays]
Length = 715
Score = 32.1 bits (71), Expect = 4.6
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 80 KYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLR 259
K + D++ E +K + E D++DK +D+ KKK++++V Q+ K ++ I LR
Sbjct: 227 KEISDDEEEEDNKKEEEGDVEEVDDEDKDTKDKSKKKKKVKEVSHEWVQINK-QKPIWLR 285
Query: 260 KTSEVKR 280
K E+ R
Sbjct: 286 KPEEITR 292
>gi|29727|emb|CAA37068| (X52889) cardiac beta myosin heavy chain [Homo sapiens]
Length = 1934
Score = 32.1 bits (71), Expect = 4.6
Identities = 21/86 (24%), Positives = 43/86 (49%), Gaps = 2/86 (2%)
Query: 53 LDCEFXXKRKYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQ 226
++ E K++ VEDE SE + + L K+K + K+K + + + ++ +
Sbjct: 932 MNAELTAKKRNVEDECSELKRDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAK 991
Query: 227 LIKIKESIDLRKTSEVKRINNEEDEINT 310
L K K+++ + + EED++NT
Sbjct: 992 LTKEKKALQEAHQQALDDLQAEEDKVNT 1019
>gi|729771|sp|Q08277|HS82_MAIZE HEAT SHOCK PROTEIN 82
Length = 715
Score = 32.1 bits (71), Expect = 4.6
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 80 KYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLR 259
K + D++ E +K + E D++DK +D+ KKK++++V Q+ K ++ I LR
Sbjct: 227 KEISDDEEEEDNKKEEEGDVEEVDDEDKDTKDKSKKKKKVKEVSHEWVQINK-QKPIWLR 285
Query: 260 KTSEVKR 280
K E+ R
Sbjct: 286 KPEEITR 292
>gi|1698895 (U75316) beta-myosin heavy chain [Sus scrofa]
Length = 1935
Score = 32.1 bits (71), Expect = 4.6
Identities = 21/86 (24%), Positives = 43/86 (49%), Gaps = 2/86 (2%)
Query: 53 LDCEFXXKRKYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQ 226
++ E K++ VEDE SE + + L K+K + K+K + + + ++ +
Sbjct: 932 MNAELTAKKRNVEDECSELKRDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAK 991
Query: 227 LIKIKESIDLRKTSEVKRINNEEDEINT 310
L K K+++ + + EED++NT
Sbjct: 992 LTKEKKALQEAHQQALDDLQAEEDKVNT 1019
>gi|2984005 (AE000750) ATPase subunit of ATP-dependent protease [Aquifex
aeolicus]
Length = 1006
Score = 32.1 bits (71), Expect = 4.6
Identities = 25/89 (28%), Positives = 46/89 (51%)
Query: 38 LLCAVLDCEFXXKRKYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKL 217
LL A+L E KY+E + L+ + EYLEN NK + K + ++++ L
Sbjct: 35 LLIALLLDEKSPLSKYIEKRGIDRKEFLKRVSEYLENLNK----QLEKAIEAEAQNLINL 90
Query: 218 SFQLIKIKESIDLRKTSEVKRINNEEDEI 304
Q++++K +I +T E+ +I ++ I
Sbjct: 91 RTQIMEVKSNIGNVQT-ELSKIRKAKERI 118
>gi|2746308 (AF037218) unknown [Human herpesvirus 7]
Length = 506
Score = 31.7 bits (70), Expect = 6.0
Identities = 24/92 (26%), Positives = 46/92 (49%), Gaps = 9/92 (9%)
Query: 53 LDCEFXXKR-------KYVEDEKSEXISKLRIIIEYLENDNKDKFCED--RKIKKKRIED 205
LDC+ ++ ++ E +K + K + + + + ++ K ED +K +KKR++D
Sbjct: 132 LDCDIKDQKLEKLFEKEHAERKKQDDDYKKKALKQKDKRRSEQKILEDCDKKDEKKRMDD 191
Query: 206 VLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNXIE 328
K Q + E DL+K + ED+ K +E
Sbjct: 192 TEKRKLQEDRRNEKQDLKKRVDDTEKRKLEDDRRNEKQDLE 232
>gi|2496111|sp|Q58135|Y725_METJA HYPOTHETICAL PROTEIN MJ0725 >gi|2127830|pir||E64390 coenzyme F420
hydrogenase beta chain - Methanococcus jannaschii
>gi|1591441 (U67519) coenzyme F420-reducing hydrogenase,
beta subunit [Methanococcus jannaschii]
Length = 261
Score = 31.7 bits (70), Expect = 6.0
Identities = 12/42 (28%), Positives = 29/42 (68%), Gaps = 2/42 (4%)
Query: 182 IKKKRIEDVLKLSFQ--LIKIKESIDLRKTSEVKRINNEEDEIN 307
++ K +ED++ + LI++KE++D++ +++ I + +EIN
Sbjct: 205 VRNKMVEDIINEMAEKGLIEVKETVDIKAIEKLENIKKKNEEIN 248
>gi|1078798|pir||S54174 topoisomerase I - Plasmodium falciparum >gi|790482|emb|CAA58716|
(X83758) topoisomerase I [Plasmodium falciparum]
Length = 839
Score = 31.7 bits (70), Expect = 6.0
Identities = 26/91 (28%), Positives = 44/91 (47%), Gaps = 5/91 (5%)
Query: 44 CAVLDCEFXXKRKYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKKKRIE-----DV 208
C+ + ++ K K++ ++ + I LENDN K + K+KK I D
Sbjct: 198 CSAIGSDYCTKEKFI-------LNFFKTFINSLENDNIIKQENETKLKKGDISNFKFIDF 250
Query: 209 LKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHK 316
+ + L+K++E L KT E K EE ++ K
Sbjct: 251 MPIKDHLLKLREE-KLNKTKEEK---EEEKKMRMEK 282
>gi|3426021|dbj|BAA32395| (AB016836) heat shock 70 kD protein cognate [Bombyx mori]
Length = 658
Score = 31.7 bits (70), Expect = 6.0
Identities = 17/45 (37%), Positives = 29/45 (63%)
Query: 80 KYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLK 214
K +D+K++ L I++LE DN+D E+ K +KK +EDV++
Sbjct: 587 KVTDDDKAKMEEALDAAIKWLE-DNQDAESEEYKKQKKTLEDVVQ 630
>gi|476355|pir||A46762 myosin alpha heavy chain, cardiac muscle - human
>gi|219524|dbj|BAA00791| (D00943) cardiac alpha-myosin
heavy chain [Homo sapiens]
Length = 1939
Score = 31.7 bits (70), Expect = 6.0
Identities = 22/96 (22%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Query: 53 LDCEFXXKRKYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQ 226
++ E K++ +EDE SE + + L K+K + K+K + + + ++ +
Sbjct: 934 MNAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAK 993
Query: 227 LIKIKESIDLRKTSEVKRINNEEDEINTHKNXIEKMIQ 340
L K K+++ + + EED++NT K+ Q
Sbjct: 994 LTKEKKALQEAHQQALDDLQAEEDKVNTLSKSKVKLEQ 1031
>gi|340613 (L07545) A 'c' was inserted after nt 369 (=nt 10459 in genomic
sequence (M10126)) to correct -1 frameshift probably due
to gel compression [Leishmania tarentolae]
Length = 355
Score = 31.7 bits (70), Expect = 6.0
Identities = 23/83 (27%), Positives = 44/83 (52%), Gaps = 8/83 (9%)
Query: 762 YLILFYILYDIFVQKYLFYENFDKYLFKCIQTNFFYYCYILNNCFFITCY*MLKDNIFLR 583
+++LF + + +F +L+ F Y++ +++C+ + ++I + L IF+
Sbjct: 71 FVLLFIVFFGLFSLSFLYTGYFIYYIYILYNFICYFFCFSI-ALYYIEFFTYLLCFIFI- 128
Query: 582 RNKIITKSNFLI--------FVKIFTSYLYC 514
I+ SN LI F IF SYL+C
Sbjct: 129 --DFISFSNHLISYFGIINMFNVIFCSYLFC 157
>gi|67985|pir||HJNVAV helicase (EC 3.6.1.-) - Autographa californica nuclear polyhedrosis
virus
Length = 1221
Score = 31.7 bits (70), Expect = 6.0
Identities = 15/29 (51%), Positives = 22/29 (75%), Gaps = 5/29 (17%)
Query: 738 YDIFVQKYLFYENFDK-----YLFKCIQTNFFYY 652
YDI +QKY+ +E+F K Y+ KC+Q +YY
Sbjct: 113 YDI-IQKYINFEDFSKSTDPGYINKCVQAGDYYY 145
>gi|1722830|sp|P52531|VU79_HSV7J PROTEIN U79 >gi|1139680 (U43400) similar to U79 of HHV6, GenBank
Accession Number X83413 at the N-terminus [Human
herpesvirus 7]
Length = 233
Score = 31.7 bits (70), Expect = 6.0
Identities = 24/92 (26%), Positives = 46/92 (49%), Gaps = 9/92 (9%)
Query: 53 LDCEFXXKR-------KYVEDEKSEXISKLRIIIEYLENDNKDKFCED--RKIKKKRIED 205
LDC+ ++ ++ E +K + K + + + + ++ K ED +K +KKR++D
Sbjct: 132 LDCDIKDQKLEKLFEKEHAERKKQDDDYKKKALKQKDKRRSEQKILEDCDKKDEKKRMDD 191
Query: 206 VLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNXIE 328
K Q + E DL+K + ED+ K +E
Sbjct: 192 TEKRKLQEDRRNEKQDLKKRVDDTEKRKLEDDRRNEKQDLE 232
>gi|127740|sp|P04460|MYSA_RABIT MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHA ISOFORM (ALPHA ISOMYOSIN)
>gi|90094|pir||A02986 myosin alpha heavy chain, cardiac
muscle - rabbit (fragment) >gi|165533 (K02443)
alpha-myosin heavy chain [Oryctolagus cuniculus]
Length = 465
Score = 31.3 bits (69), Expect = 7.8
Identities = 20/86 (23%), Positives = 43/86 (49%), Gaps = 2/86 (2%)
Query: 53 LDCEFXXKRKYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQ 226
++ E K++ +EDE SE + + L K+K + K+K + + + ++ +
Sbjct: 129 MNAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAK 188
Query: 227 LIKIKESIDLRKTSEVKRINNEEDEINT 310
L K K+++ + + EED++NT
Sbjct: 189 LTKEKKALQEAHQQALDDLQAEEDKVNT 216
>gi|127748|sp|P02564|MYSB_RAT MYOSIN HEAVY CHAIN, CARDIAC MUSCLE BETA ISOFORM >gi|92499|pir||S06006
myosin beta heavy chain, cardiac muscle - rat
>gi|56657|emb|CAA34065| (X15939) beta cardiac myosin
heavy chain (AA 1-1935) [Rattus norvegicus]
Length = 1935
Score = 31.3 bits (69), Expect = 7.8
Identities = 20/86 (23%), Positives = 43/86 (49%), Gaps = 2/86 (2%)
Query: 53 LDCEFXXKRKYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQ 226
++ E K++ +EDE SE + + L K+K + K+K + + + ++ +
Sbjct: 932 MNAELTAKKRKLEDECSELKRDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIVK 991
Query: 227 LIKIKESIDLRKTSEVKRINNEEDEINT 310
L K K+++ + + EED++NT
Sbjct: 992 LTKEKKALQEAHQQALDDLQAEEDKVNT 1019
>gi|191618 (M76598) alpha cardiac myosin heavy chain [Mus musculus]
Length = 1938
Score = 31.3 bits (69), Expect = 7.8
Identities = 20/86 (23%), Positives = 43/86 (49%), Gaps = 2/86 (2%)
Query: 53 LDCEFXXKRKYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQ 226
++ E K++ +EDE SE + + L K+K + K+K + + + ++ +
Sbjct: 934 MNAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAK 993
Query: 227 LIKIKESIDLRKTSEVKRINNEEDEINT 310
L K K+++ + + EED++NT
Sbjct: 994 LTKEKKALQEAHQQALDDLQAEEDKVNT 1021
>gi|3024204|sp|Q02566|MYSA_MOUSE MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHA ISOFORM
>gi|2119306|pir||I49464 alpha cardiac myosin heavy chain
- mouse >gi|191620 (M76599) alpha cardiac myosin heavy
chain [Mus musculus] >gi|191624 (M76601) alpha cardiac
myosin heavy chain [Mus musculus]
Length = 1938
Score = 31.3 bits (69), Expect = 7.8
Identities = 20/86 (23%), Positives = 43/86 (49%), Gaps = 2/86 (2%)
Query: 53 LDCEFXXKRKYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQ 226
++ E K++ +EDE SE + + L K+K + K+K + + + ++ +
Sbjct: 934 MNAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAK 993
Query: 227 LIKIKESIDLRKTSEVKRINNEEDEINT 310
L K K+++ + + EED++NT
Sbjct: 994 LTKEKKALQEAHQQALDDLQAEEDKVNT 1021
>gi|127741|sp|P02563|MYSA_RAT MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHA ISOFORM
>gi|92498|pir||S06005 myosin alpha heavy chain, cardiac
muscle - rat >gi|56655|emb|CAA34064| (X15938) alpha
cardiac myosin heavy chain (AA 1-1938) [Rattus
norvegicus]
Length = 1938
Score = 31.3 bits (69), Expect = 7.8
Identities = 20/86 (23%), Positives = 43/86 (49%), Gaps = 2/86 (2%)
Query: 53 LDCEFXXKRKYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQ 226
++ E K++ +EDE SE + + L K+K + K+K + + + ++ +
Sbjct: 933 MNAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAK 992
Query: 227 LIKIKESIDLRKTSEVKRINNEEDEINT 310
L K K+++ + + EED++NT
Sbjct: 993 LTKEKKALQEAHQQALDDLQAEEDKVNT 1020
>gi|2541912|dbj|BAA22851| (AB008004) troponin T [Patinopecten yessoensis]
Length = 321
Score = 31.3 bits (69), Expect = 7.8
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 77 RKYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLK-LSFQLIKIKESID 253
R+ E K E I + R ++E + ++K + E+ + K+K+ E+ K + + IK+KE +
Sbjct: 62 RQKRESRKQERIEEDRRLLEVRKEEDKRRKAEEEERKRKKQEEERKRIEAKKIKLKEMEE 121
Query: 254 LRKTSE 271
+K S+
Sbjct: 122 RKKMSK 127
>gi|3915779|sp|P13539|MYSA_MESAU MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHA ISOFORM
>gi|2119307|pir||I48175 alpha-cardiac myosin heavy chain
gene - golden hamster >gi|402374 (L15351) alpha-cardiac
myosin heavy chain gene [Mesocricetus auratus]
Length = 1939
Score = 31.3 bits (69), Expect = 7.8
Identities = 20/86 (23%), Positives = 43/86 (49%), Gaps = 2/86 (2%)
Query: 53 LDCEFXXKRKYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQ 226
++ E K++ +EDE SE + + L K+K + K+K + + + ++ +
Sbjct: 934 MNAELTSKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAK 993
Query: 227 LIKIKESIDLRKTSEVKRINNEEDEINT 310
L K K+++ + + EED++NT
Sbjct: 994 LTKEKKALQEAHQQALDDLQAEEDKVNT 1021
>gi|2541910|dbj|BAA22850| (AB008003) troponin T [Patinopecten yessoensis]
Length = 319
Score = 31.3 bits (69), Expect = 7.8
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 77 RKYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLK-LSFQLIKIKESID 253
R+ E K E I + R ++E + ++K + E+ + K+K+ E+ K + + IK+KE +
Sbjct: 56 RQKRESRKQERIEEDRRLLEVRKEEDKRRKAEEEERKRKKQEEERKRIEAKKIKLKEMEE 115
Query: 254 LRKTSE 271
+K S+
Sbjct: 116 RKKMSK 121
>gi|423341|pir||S33732 myosin alpha heavy chain, masticatory muscle - rabbit (fragment)
>gi|386120|bbs|133316 (S62056) myosin alpha heavy chain
{S2 subfragment} [rabbits, masseter, Peptide Partial,
234 aa] [Oryctolagus cuniculus]
Length = 234
Score = 31.3 bits (69), Expect = 7.8
Identities = 20/86 (23%), Positives = 43/86 (49%), Gaps = 2/86 (2%)
Query: 53 LDCEFXXKRKYVEDEKSEXISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQ 226
++ E K++ +EDE SE + + L K+K + K+K + + + ++ +
Sbjct: 76 MNAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAK 135
Query: 227 LIKIKESIDLRKTSEVKRINNEEDEINT 310
L K K+++ + + EED++NT
Sbjct: 136 LTKEKKALQEAHQQALDDLQAEEDKVNT 163
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Apr 17, 1999 5:33 AM
Number of letters in database: 113,023,754
Number of sequences in database: 369,800
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87772950
Number of Sequences: 369800
Number of extensions: 1296392
Number of successful extensions: 5298
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 5293
Number of HSP's gapped (non-prelim): 45
length of query: 254
length of database: 113023754
effective HSP length: 54
effective length of query: 199
effective length of database: 93054554
effective search space: 18517856246
effective search space used: 18517856246
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 68 (30.9 bits)