BLASTX 2.0.8 [Jan-05-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 14VII-58F
(513 letters)
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
369,800 sequences; 113,023,754 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|3511142|gb|AAC33729| (AF061244) unknown [Agrocybe aegerita] 31 6.1
>gi|3511142|gb|AAC33729| (AF061244) unknown [Agrocybe aegerita]
Length = 173
Score = 30.9 bits (68), Expect = 6.1
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 231 IKKIQSPYKSYYFNIEVIFSL*SKCILDNIYLSLLN 338
+ K+ + ++ YY ++E++FS+ D +YLSLL+
Sbjct: 10 LSKLLNIFRKYYLDLEIVFSVIKLGFSDALYLSLLD 45
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Apr 17, 1999 5:33 AM
Number of letters in database: 113,023,754
Number of sequences in database: 369,800
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69538957
Number of Sequences: 369800
Number of extensions: 1055272
Number of successful extensions: 1815
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1814
Number of HSP's gapped (non-prelim): 1
length of query: 171
length of database: 113023754
effective HSP length: 52
effective length of query: 118
effective length of database: 93794154
effective search space: 11067710172
effective search space used: 11067710172
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 66 (30.1 bits)