BLASTX 2.0.8 [Jan-05-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 14VII-49F
(775 letters)
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
369,800 sequences; 113,023,754 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|2920561 (AF019228) chitin synthase [Spraguea lophii] 246 6e-66
gi|2133265|pir||JC6079 chitin synthase (EC 2.4.1.16) - Emericell... 50 1e-05
gi|2443816 (AF020528) Class IV chitin synthase [Magnaporthe grisea] 50 2e-05
gi|1272475 (U52362) chitin synthase [Emericella nidulans] 50 2e-05
gi|3360|emb|CAA40559| (X57300) chitin synthase [Saccharomyces ce... 48 1e-04
gi|172104 (M73697) chitin synthase [Saccharomyces cerevisiae] 48 1e-04
gi|584947|sp|P29465|CHS3_YEAST CHITIN SYNTHASE 3 (CHITIN-UDP ACE... 48 1e-04
gi|2444457 (AF021318) chitin synthase [Filobasidiella neoformans] 43 0.002
gi|2493681|sp|Q01285|CHS4_NEUCR CHITIN SYNTHASE 4 (CHITIN-UDP AC... 42 0.005
gi|4218177|emb|CAA08762| (AJ009630) chitin synthase [Glomus vers... 41 0.007
gi|3978549|dbj|BAA34808| (AB004547) Chs3 [Rhizopus microsporus v... 41 0.007
gi|231792|sp|P30573|CHS3_CANAL CHITIN SYNTHASE 3 (CHITIN-UDP ACE... 39 0.047
gi|742325|prf||2009366A chitin synthase 3 [Candida albicans] 39 0.047
gi|2613106 (AF030553) class IV chitin synthase [Ustilago maydis] 36 0.41
gi|2258376 (AF007261) Orf717 [Reclinomonas americana] 36 0.41
gi|3097043|emb|CAA75298| (Y15035) B22R [Cowpox virus] 32 6.1
gi|1658347 (U64844) weak similarity similar to Na+ dependent-pho... 31 8.0
>gi|2920561 (AF019228) chitin synthase [Spraguea lophii]
Length = 185
Score = 246 bits (622), Expect = 6e-66
Identities = 118/134 (88%), Positives = 120/134 (89%)
Query: 350 IIAXSSRTLFRQDILRDDHAKSFWYNIXPIFTFLIPDCILRCLGIKSKSSITAWREKVAX 529
++ SSRTLFRQDILRDDHAKSFWYNI PIFTFLIPDCILRCLGIKSKSSITAWREKVA
Sbjct: 9 LLRSSSRTLFRQDILRDDHAKSFWYNIXPIFTFLIPDCILRCLGIKSKSSITAWREKVAL 68
Query: 530 XXXXXXXXXXXGFFTYGINIFLCHGNNNFIYGKLKLKKNYVIANGGIYYTDEYENSSIIY 709
GFFTYGINIFLCHGNNNFIYGKLKLKKNYVIANGGIYYTDEYENSSIIY
Sbjct: 69 CSIISMLCLILGFFTYGINIFLCHGNNNFIYGKLKLKKNYVIANGGIYYTDEYENSSIIY 128
Query: 710 LGSKNTGNLVIWIF 751
LGSKNTGNLVIWIF
Sbjct: 129 LGSKNTGNLVIWIF 142
Score = 26.2 bits (56), Expect = 6e-66
Identities = 11/14 (78%), Positives = 13/14 (92%)
Query: 327 MQRPSNSELLRXAA 368
MQRPSNSELLR ++
Sbjct: 1 MQRPSNSELLRSSS 14
>gi|2133265|pir||JC6079 chitin synthase (EC 2.4.1.16) - Emericella nidulans
>gi|1688026|dbj|BAA11866| (D83246) chitin synthase
[Emericella nidulans]
Length = 1086
Score = 50.4 bits (118), Expect = 1e-05
Identities = 26/98 (26%), Positives = 42/98 (42%)
Query: 380 RQDILRDDHAKSFWYNIXPIFTFLIPDCILRCLGIKSKSSITAWREKVAXXXXXXXXXXX 559
R+ + S W + TF PD +L+C G+ K+ +AWREK+
Sbjct: 76 RRKAMEQVRPPSLWTTYCSVITFWAPDFVLKCFGMPQKAQRSAWREKIGLISIILMIAAF 135
Query: 560 XGFFTYGINIFLCHGNNNFIYGKLKLKKNYVIANGGIY 673
GF T+G +C G + ++ Y+I +G Y
Sbjct: 136 VGFLTFGFTATVC-GTPSTRLKINEIGSGYMIFHGQAY 172
>gi|2443816 (AF020528) Class IV chitin synthase [Magnaporthe grisea]
Length = 1198
Score = 50.0 bits (117), Expect = 2e-05
Identities = 27/90 (30%), Positives = 43/90 (47%)
Query: 413 SFWYNIXPIFTFLIPDCILRCLGIKSKSSITAWREKVAXXXXXXXXXXXXGFFTYGINIF 592
S W + TF PD I++C G+ +K+ AWREK+ GF T+G N
Sbjct: 205 SAWNVYCAVITFWSPDFIMKCCGMPAKAQRRAWREKIGLISLILIIMGVVGFLTFGFNQA 264
Query: 593 LCHGNNNFIYGKLKLKKNYVIANGGIYYTD 682
+C G ++ + ++Y+I +G Y D
Sbjct: 265 VCGGPVLRLHIN-SVDRSYMIFHGTAYNLD 293
>gi|1272475 (U52362) chitin synthase [Emericella nidulans]
Length = 1184
Score = 50.0 bits (117), Expect = 2e-05
Identities = 21/73 (28%), Positives = 32/73 (43%)
Query: 380 RQDILRDDHAKSFWYNIXPIFTFLIPDCILRCLGIKSKSSITAWREKVAXXXXXXXXXXX 559
R+ + S W + TF PD +L+C G+ K+ +AWREK+
Sbjct: 174 RRKAMEQVRPPSLWTTYCSVITFWAPDFVLKCFGMPQKAQRSAWREKIGLISIILMIAAF 233
Query: 560 XGFFTYGINIFLC 598
GF T+G +C
Sbjct: 234 VGFLTFGFTATVC 246
>gi|3360|emb|CAA40559| (X57300) chitin synthase [Saccharomyces cerevisiae]
Length = 1099
Score = 47.6 bits (111), Expect = 1e-04
Identities = 33/97 (34%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Query: 413 SFWYNIXPIFTFLIPDCILRCLGIKSKSSITAWREKVAXXXXXXXXXXXXGFFTYGINIF 592
SFW TF P IL G+ K AWREKVA F T+G
Sbjct: 101 SFWQMYCYFITFWAPAPILAFCGMPKKERQMAWREKVALISVILYIGAIVAFLTFGFTKT 160
Query: 593 LCHGNNNFIYGKLKLKKN-----YVIANGGIYYTDEYENSSI 703
+C + KL+LK N +V+ NG Y D S I
Sbjct: 161 VCSSS------KLRLKNNEVSTEFVVINGKAYELDTSSRSGI 196
>gi|172104 (M73697) chitin synthase [Saccharomyces cerevisiae]
Length = 1165
Score = 47.6 bits (111), Expect = 1e-04
Identities = 33/97 (34%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Query: 413 SFWYNIXPIFTFLIPDCILRCLGIKSKSSITAWREKVAXXXXXXXXXXXXGFFTYGINIF 592
SFW TF P IL G+ K AWREKVA F T+G
Sbjct: 167 SFWQMYCYFITFWAPAPILAFCGMPKKERQMAWREKVALISVILYIGAIVAFLTFGFTKT 226
Query: 593 LCHGNNNFIYGKLKLKKN-----YVIANGGIYYTDEYENSSI 703
+C + KL+LK N +V+ NG Y D S I
Sbjct: 227 VCSSS------KLRLKNNEVSTEFVVINGKAYELDTSSRSGI 262
>gi|584947|sp|P29465|CHS3_YEAST CHITIN SYNTHASE 3 (CHITIN-UDP ACETYL-GLUCOSAMINYL TRANSFERASE 3)
>gi|626127|pir||S45879 chitin synthase (EC 2.4.1.16) 3 -
yeast (Saccharomyces cerevisiae)
>gi|498752|emb|CAA53680| (X76078) chitin synthase 3
[Saccharomyces cerevisiae] >gi|536230|emb|CAA84965|
(Z35892) ORF YBR023c [Saccharomyces cerevisiae]
>gi|1587581|prf||2206497D chitin synthase 3
[Saccharomyces cerevisiae]
Length = 1165
Score = 47.6 bits (111), Expect = 1e-04
Identities = 33/97 (34%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Query: 413 SFWYNIXPIFTFLIPDCILRCLGIKSKSSITAWREKVAXXXXXXXXXXXXGFFTYGINIF 592
SFW TF P IL G+ K AWREKVA F T+G
Sbjct: 167 SFWQMYCYFITFWAPAPILAFCGMPKKERQMAWREKVALISVILYIGAIVAFLTFGFTKT 226
Query: 593 LCHGNNNFIYGKLKLKKN-----YVIANGGIYYTDEYENSSI 703
+C + KL+LK N +V+ NG Y D S I
Sbjct: 227 VCSSS------KLRLKNNEVSTEFVVINGKAYELDTSSRSGI 262
>gi|2444457 (AF021318) chitin synthase [Filobasidiella neoformans]
Length = 1041
Score = 43.0 bits (99), Expect = 0.002
Identities = 25/63 (39%), Positives = 31/63 (48%), Gaps = 2/63 (3%)
Query: 443 TFLIPDCILRCLGIKSKSSITAWREKVAXXXXXXXXXXXXGFFTYGINIFLCHGN--NNF 616
TF P +LR GIK K S AWREK+A GF T G+ LC + N
Sbjct: 83 TFWAPPVLLRWFGIKEKQSRQAWREKIALCWIAVLLGGVVGFVTMGLQRALCPADQQNQS 142
Query: 617 IYGKL 631
+Y +L
Sbjct: 143 MYQRL 147
>gi|2493681|sp|Q01285|CHS4_NEUCR CHITIN SYNTHASE 4 (CHITIN-UDP ACETYL-GLUCOSAMINYL TRANSFERASE 4)
>gi|2133308|pir||S61886 chitin synthase class IV -
Neurospora crassa >gi|793938 (U25097) chitin synthase
[Neurospora crassa]
Length = 1195
Score = 41.8 bits (96), Expect = 0.005
Identities = 27/93 (29%), Positives = 40/93 (42%), Gaps = 2/93 (2%)
Query: 413 SFWYNIXPIFTFLIPDCILRCLGIKSKSSITAWREKVAXXXXXXXXXXXXGFFTYGINIF 592
SFW TF P +L+C G+ + AWREK+ GF T+G
Sbjct: 169 SFWNIYCGFVTFWCPGFVLKCFGMPEMAQQRAWREKMGLISIILLIMGFVGFITFGFTQV 228
Query: 593 LCHGNNNFIYGK--LKLKKNYVIANGGIYYTDEYE 691
+C GK L+L+ N V + I++ Y+
Sbjct: 229 VC--------GKPPLRLRINEVGSGYMIFHGSAYD 255
>gi|4218177|emb|CAA08762| (AJ009630) chitin synthase [Glomus versiforme]
Length = 1194
Score = 41.4 bits (95), Expect = 0.007
Identities = 31/102 (30%), Positives = 43/102 (41%), Gaps = 6/102 (5%)
Query: 419 WYNIXPIFTFLIPDCILRCLGIKSKSSITAWREKVAXXXXXXXXXXXXGFFTYGINIFLC 598
W I TF +P +L+ G + AWREK+ GF T+G +C
Sbjct: 208 WTAYCSIITFWVPGFLLKVFGKPQPAQQQAWREKIGLISIILFMCAFVGFLTFGFTQAVC 267
Query: 599 HGNNNFIYGKLKLKKNYV-----IANGGIYYTDEYENSSII-YLGSKN 724
L+LK NYV I +G Y T + + + LG KN
Sbjct: 268 G------IPPLRLKVNYVDTGYLIIHGRAYDTSKSNHPPALGILGGKN 309
>gi|3978549|dbj|BAA34808| (AB004547) Chs3 [Rhizopus microsporus var. oligosporus]
Length = 1112
Score = 41.4 bits (95), Expect = 0.007
Identities = 27/108 (25%), Positives = 47/108 (43%)
Query: 413 SFWYNIXPIFTFLIPDCILRCLGIKSKSSITAWREKVAXXXXXXXXXXXXGFFTYGINIF 592
S W + T P +L+ GIK K WREKV+ GF T+G N
Sbjct: 114 SCWVTTTWVLTCWTPPVLLKACGIKDKGMQQIWREKVSLVMIIVFLCAFVGFLTFGFNAT 173
Query: 593 LCHGNNNFIYGKLKLKKNYVIANGGIYYTDEYENSSIIYLGSKNTGNL 736
+C N I +++++++ +G + + + S + G +G+L
Sbjct: 174 VCGITPNRI-RPTGVEESHIVISGRAFDLKTFRHPSPV-PGMPQSGDL 219
>gi|231792|sp|P30573|CHS3_CANAL CHITIN SYNTHASE 3 (CHITIN-UDP ACETYL-GLUCOSAMINYL TRANSFERASE 3)
>gi|218362|dbj|BAA02707| (D13454) chitin synthase III
[Candida albicans]
Length = 1213
Score = 38.7 bits (88), Expect = 0.047
Identities = 25/107 (23%), Positives = 44/107 (40%), Gaps = 1/107 (0%)
Query: 353 IAXSSRTLFRQDILRDDHAKSFWYNIXPIFTFLIPDCILRCLGIKSKSSITAWREKVAXX 532
+ SSR + + + H FW TF P +L+ G+ +K AWREK+
Sbjct: 145 VISSSRPMNNEKPAKPKHDIYFWKVYCYAITFWAPAPLLKLFGLPTKDRQFAWREKIGLI 204
Query: 533 XXXXXXXXXXGFFTYGINIFLCHGNNNFIYGKLK-LKKNYVIANGGIY 673
+ T+G +C ++ + ++ + Y+I NG Y
Sbjct: 205 SCILYVGAFVAYLTFGFTKTVC--SSQVVRTQINHVNGGYLIINGRAY 250
>gi|742325|prf||2009366A chitin synthase 3 [Candida albicans]
Length = 1175
Score = 38.7 bits (88), Expect = 0.047
Identities = 25/107 (23%), Positives = 44/107 (40%), Gaps = 1/107 (0%)
Query: 353 IAXSSRTLFRQDILRDDHAKSFWYNIXPIFTFLIPDCILRCLGIKSKSSITAWREKVAXX 532
+ SSR + + + H FW TF P +L+ G+ +K AWREK+
Sbjct: 107 VISSSRPMNNEKPAKPKHDIYFWKVYCYAITFWAPAPLLKLFGLPTKDRQFAWREKIGLI 166
Query: 533 XXXXXXXXXXGFFTYGINIFLCHGNNNFIYGKLK-LKKNYVIANGGIY 673
+ T+G +C ++ + ++ + Y+I NG Y
Sbjct: 167 SCILYVGAFVAYLTFGFTKTVC--SSQVVRTQINHVNGGYLIINGRAY 212
>gi|2613106 (AF030553) class IV chitin synthase [Ustilago maydis]
Length = 1239
Score = 35.6 bits (80), Expect = 0.41
Identities = 18/60 (30%), Positives = 23/60 (38%)
Query: 419 WYNIXPIFTFLIPDCILRCLGIKSKSSITAWREKVAXXXXXXXXXXXXGFFTYGINIFLC 598
W I T P LR GI++ AWREK+ GF T+G +C
Sbjct: 208 WMIYCYILTICCPGPFLRIFGIRTPEQQRAWREKMGLIGIITLIMAAVGFLTFGFTQTVC 267
>gi|2258376 (AF007261) Orf717 [Reclinomonas americana]
Length = 717
Score = 35.6 bits (80), Expect = 0.41
Identities = 22/79 (27%), Positives = 47/79 (58%), Gaps = 3/79 (3%)
Query: 594 KNIFIPYV--KNPKIKHNIEIIEHNATFSLHAVILLLLFIPKHRNIQSGIRNVKIGXILY 421
KNI + Y+ KN K+N+ + + FS+ ++L+L F+ +H N + G +++ I +++
Sbjct: 77 KNIGLYYIYKKNKLKKNNLLYVYSHEFFSIQIIVLILEFVNRHLNYRIGTKDL-IFLLMF 135
Query: 420 QND-LAWSSRKIS*RNNVLLLY 358
ND + ++ I+ +N + Y
Sbjct: 136 LNDPIKYNKNLINNQNQLYFHY 157
>gi|3097043|emb|CAA75298| (Y15035) B22R [Cowpox virus]
Length = 1933
Score = 31.7 bits (70), Expect = 6.1
Identities = 15/46 (32%), Positives = 26/46 (55%)
Query: 575 YGINIFLCHGNNNFIYGKLKLKKNYVIANGGIYYTDEYENSSIIYL 712
Y I+ +LC +++IY ++ K+YV+ N D E+S I+ L
Sbjct: 1762 YPIDNYLCGTLDDYIYTSVEYNKSYVLVNDTYMSYDYLESSGIVVL 1807
>gi|1658347 (U64844) weak similarity similar to Na+ dependent-phosphate
cotransporter [Caenorhabditis elegans]
Length = 344
Score = 31.3 bits (69), Expect = 8.0
Identities = 24/86 (27%), Positives = 36/86 (40%), Gaps = 6/86 (6%)
Query: 519 FSLHAVILLLLFIP------KHRNIQSGIRNVKIGXILYQNDLAWSSRKIS*RNNVLLLY 358
F LHA++ L+LF H + ++G I A R S +L
Sbjct: 120 FYLHALVGLVLFAIWTIVYIDHPEDTGKVSQKELGKIQKNKSEAHLDRNTSVPYRKILTS 179
Query: 357 AIIHCCWVSALXXXXXXXXXXXXNSDKLKIII 262
+I C W++A S+KLKI+I
Sbjct: 180 PVIICVWINAFFEMSAVIMFSSFISEKLKIMI 211
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Apr 17, 1999 5:33 AM
Number of letters in database: 113,023,754
Number of sequences in database: 369,800
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110431664
Number of Sequences: 369800
Number of extensions: 1864805
Number of successful extensions: 3673
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3651
Number of HSP's gapped (non-prelim): 23
length of query: 258
length of database: 113023754
effective HSP length: 54
effective length of query: 203
effective length of database: 93054554
effective search space: 18890074462
effective search space used: 18890074462
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 68 (30.9 bits)