BLASTX 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 14VII-37F
         (542 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           368,476 sequences; 112,640,273 total letters

Searching...................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|3845291 (AE001420) predicted integral membrane protein [Plasm...    31  8.7


>gi|3845291 (AE001420) predicted integral membrane protein [Plasmodium
           falciparum]
           Length = 307
           
 Score = 30.5 bits (67), Expect = 8.7
 Identities = 16/37 (43%), Positives = 23/37 (61%), Gaps = 1/37 (2%)

Query: 222 YSLFK*INRITSTFKRKVILLYF-*RISTSYYVLNVFF 112
           +SLFK  N I +   + + +LYF  RI  +Y V+N FF
Sbjct: 176 FSLFKVFNEIKTMHPKNISVLYFYDRIQRTYIVINKFF 213


  Database: Non-redundant GenBank CDS
  translations+PDB+SwissProt+SPupdate+PIR
    Posted date:  Apr 12, 1999 12:54 PM
  Number of letters in database: 112,640,273
  Number of sequences in database:  368,476
  
Lambda     K      H
   0.318    0.135     0.00 

Gapped
Lambda     K      H
   0.270   0.0470 4.94e-324 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84981534
Number of Sequences: 368476
Number of extensions: 1274823
Number of successful extensions: 1832
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1831
Number of HSP's gapped (non-prelim): 1
length of query: 180
length of database: 112640273
effective HSP length: 52
effective length of query: 128
effective length of database: 93479521
effective search space: 11965378688
effective search space used: 11965378688
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 67 (30.5 bits)