BLASTX 2.0.8 [Jan-05-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 14VII-1F
(840 letters)
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
369,800 sequences; 113,023,754 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|1171612|emb|CAA64596| (X95276) Clp (C?) [Plasmodium falciparum] 40 0.018
gi|2131456|pir||S61174 hypothetical protein YDR379w - yeast (Sac... 33 2.3
gi|465777|sp|P34323|YKTB_CAEEL HYPOTHETICAL 36.1 KD PROTEIN C07A... 33 3.0
gi|2706462|emb|CAA15920| (AL021046) putative pyruvate decarboxyl... 32 5.2
gi|3845247 (AE001410) predicted secreted protein [Plasmodium fal... 32 5.2
gi|584896|sp|P37892|CBPH_LOPAM CARBOXYPEPTIDASE H PRECURSOR (CPH... 32 6.8
gi|4493974|emb|CAB39033| (AL034559) predicted using hexExon; MAL... 31 8.9
gi|2149437 (U85963) asparigine-rich protein [Plasmodium falciparum] 31 8.9
gi|567922 (L36903) varI gene product [Saccharomyces cerevisiae] 31 8.9
gi|1750206 (U37559) carboxypeptidase E [Aplysia californica] 31 8.9
gi|1750208 (U37581) carboxypeptidase E-1 [Aplysia californica] >... 31 8.9
>gi|1171612|emb|CAA64596| (X95276) Clp (C?) [Plasmodium falciparum]
Length = 766
Score = 40.2 bits (92), Expect = 0.018
Identities = 25/77 (32%), Positives = 41/77 (52%), Gaps = 7/77 (9%)
Query: 558 NKEIKILFILVNKIYSVSI*HYLFLFKKILNTYFSYQNI*KGYILKNRSRDTFAVYPF-- 731
N ++ LF+L+NK+Y +I + KK NTYF Y I Y K R +D + F
Sbjct: 278 NNKLYYLFLLLNKLYGYNIHIIIVTNKKEYNTYFKYNIIKDSYFYKIRIKDLSILQTFLI 337
Query: 732 -----WKLLLFFTLVMNKKIKLEM 788
+K + ++ + +N I E+
Sbjct: 338 IKNNIYKYINYYKININNYIIYEL 361
>gi|2131456|pir||S61174 hypothetical protein YDR379w - yeast (Saccharomyces cerevisiae)
>gi|849200 (U28373) Ydr379wp [Saccharomyces cerevisiae]
Length = 1009
Score = 33.2 bits (74), Expect = 2.3
Identities = 26/94 (27%), Positives = 47/94 (49%), Gaps = 8/94 (8%)
Query: 458 SNHGQETNIEDVLIKIQEENGTKKKDNGVVSNLDYKAKLDDGENTEFTI--------NSL 303
S+H + +I+D+L E + ++ +V N DY K+ GE+ + + +S+
Sbjct: 221 SSHARTVSIDDILNSTLEHDSNSIEEQSLVDNEDYINKM--GEDVTYRLLKPQRANRDSI 278
Query: 302 EYNGIRIANGNCDADYGFSNLKLNDQGKFEGKDMNGNDILGN 177
RI N N +A+ FS + K + D N+I+ N
Sbjct: 279 VVKDPRIPNSNSNANRFFSIYDKEETDK-DDTDNKENEIIVN 319
>gi|465777|sp|P34323|YKTB_CAEEL HYPOTHETICAL 36.1 KD PROTEIN C07A9.12 IN CHROMOSOME III
>gi|482085|pir||S40712 hypothetical protein C07A9.12 -
Caenorhabditis elegans >gi|3873988|emb|CAA82346|
(Z29094) cDNA EST EMBL:C09049 comes from this gene
[Caenorhabditis elegans]
Length = 318
Score = 32.8 bits (73), Expect = 3.0
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 638 KNIKYLFFLSKYIKRIHFKK*ESRYFCGIPLLEVITFF 751
KNI++ FF K + R FKK E R+ C + L E++ F
Sbjct: 94 KNIRHAFFEKKNLLRFFFKK-EFRFHCSLLLFEILRSF 130
>gi|2706462|emb|CAA15920| (AL021046) putative pyruvate decarboxylase [Schizosaccharomyces
pombe]
Length = 570
Score = 32.1 bits (71), Expect = 5.2
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 573 ILFILVNKIYSVS-I*HYLFLFKKILNTYFSYQNI*KGYILKN 698
I+F++ NK Y++ + H L +NT + YQN+ KGY KN
Sbjct: 472 IIFVINNKGYTIERLIHGLHAVYNDINTEWDYQNLLKGYGAKN 514
>gi|3845247 (AE001410) predicted secreted protein [Plasmodium falciparum]
Length = 1278
Score = 32.1 bits (71), Expect = 5.2
Identities = 22/90 (24%), Positives = 42/90 (46%)
Query: 446 QETNIEDVLIKIQEENGTKKKDNGVVSNLDYKAKLDDGENTEFTINSLEYNGIRIANGNC 267
++ N +D +I+ +N KKK NG++ +++ D +N+ F N+ N N
Sbjct: 285 KKANGDDKVIQKCIDNERKKKQNGMIQSVN-----DGDKNSNFNNNNNNNINGDSNNNNI 339
Query: 266 DADYGFSNLKLNDQGKFEGKDMNGNDILGN 177
+ D +N+ + D N N+I G+
Sbjct: 340 NGDSNNNNINGDSNNNNINGDSNNNNINGD 369
>gi|584896|sp|P37892|CBPH_LOPAM CARBOXYPEPTIDASE H PRECURSOR (CPH) (CARBOXYPEPTIDASE E) (CPE)
(ENKEPHALIN CONVERTASE) (PROHORMONE PROCESSING
CARBOXYPEPTIDASE) >gi|627256|pir||A54324
carboxypeptidase H - American goosefish
>gi|244403|bbs|80566 (S80565) carboxypeptidase H
[anglerfish, Peptide, 454 aa] >gi|404640 (U01909)
carboxypeptidase H [Lophius americanus]
Length = 454
Score = 31.7 bits (70), Expect = 6.8
Identities = 18/42 (42%), Positives = 28/42 (65%), Gaps = 6/42 (14%)
Query: 206 DMNGNDILGNEILIYYLLF------YANITIGDNIINTFIRILPSNHP 81
+M+GN+ +G E+LIY + N TI D I +T I ++PS +P
Sbjct: 90 NMHGNEAVGRELLIYLAQYLCNQYQQGNETIIDLIHSTRIHLMPSMNP 137
>gi|4493974|emb|CAB39033| (AL034559) predicted using hexExon; MAL3P7.15 (PFC0930c),
Hypothetical protein, len: 1845 aa [Plasmodium
falciparum]
Length = 1844
Score = 31.3 bits (69), Expect = 8.9
Identities = 31/104 (29%), Positives = 49/104 (46%), Gaps = 1/104 (0%)
Query: 473 QSSTISNHGQETNIE-DVLIKIQEENGTKKKDNGVVSNLDYKAKLDDGENTEFTINSLEY 297
Q + +N G E ++ D K E+ +KK N +N + K + + +F IN L+
Sbjct: 1429 QLTNNNNDGMEKALDHDTNYKKNEKMNKQKKKN---NNNNNKMERKQSKLQQF-INKLK- 1483
Query: 296 NGIRIANGNCDADYGFSNLKLNDQGKFEGKDMNGNDILGNEILIY 162
++ N + DY +N +ND K D N N+I N I IY
Sbjct: 1484 --MKKGNDSTTKDYDNNN-NINDDKKNINDDNNNNNIYDNNINIY 1525
>gi|2149437 (U85963) asparigine-rich protein [Plasmodium falciparum]
Length = 624
Score = 31.3 bits (69), Expect = 8.9
Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 404 ENGTKKKDNGVVSNLDYKAKLDDGENTEFTINSLEYNGIRIANGNCDADYGFSNLKLNDQ 225
EN + D ++ N+D K D+ N E +++ N I N N + + N N+
Sbjct: 263 ENVCESMDETLIENIDIHEKNDEVNNFE----NVKGNNINNNNNNINNNNNNINNNNNNN 318
Query: 224 GKFEGKDMNGNDILGNEILIYYLLFYANITIGDNIINTFIR--ILPSNHPVYNNIDIYEV 51
+ N N+ L N I + NI + DN+++ + N+ + NN++ E+
Sbjct: 319 NNNNNNNNNNNNSLVN---ILHNNVSENILLNDNMLDDLYQNGKYKKNNIINNNVNNNEL 375
Query: 50 KPSHLWVY 27
+++ Y
Sbjct: 376 FNNNIISY 383
>gi|567922 (L36903) varI gene product [Saccharomyces cerevisiae]
Length = 404
Score = 31.3 bits (69), Expect = 8.9
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Query: 422 LIKIQEENGTKKKDNGVVSNLDYKAKLDDGENTEFTINSLEYNGIRIANGNCDADYGFSN 243
+I + N +N + +N +Y ++ N IN++ YN + I N D
Sbjct: 275 MINLLNNNNNNNNNNNINNNNNYN---NNNNNYIGNINNI-YNNMTI--DNIPMDILMYK 328
Query: 242 LKLNDQGKFEGKDMNGNDILGNEILIYYLLFYANITIGDNIINTF-IRILPSNHPVYNNI 66
+ KF+G+ N N L+ F + NI N + + +PSNH +YNN
Sbjct: 329 YLVGWSIKFKGRLSNNNGRTSTTNLLNGT-FNNKKYLWSNINNNYKLNYIPSNHNLYNNS 387
Query: 65 DI 60
+I
Sbjct: 388 NI 389
>gi|1750206 (U37559) carboxypeptidase E [Aplysia californica]
Length = 561
Score = 31.3 bits (69), Expect = 8.9
Identities = 32/109 (29%), Positives = 58/109 (52%), Gaps = 17/109 (15%)
Query: 407 EENGTKKKDNGVVSNLDYKAKLDDGENTEFTINSLEYNGIRIAN--------GNCDADYG 252
EENG+KK ++ + + Y+ + + + +N RI N N
Sbjct: 33 EENGSKKPESTIFFHHTYEEMV----SLMYEVNKACPEVTRIYNLSEPSVEKRNLTVLEI 88
Query: 251 FSNLKLNDQGKFEGK---DMNGNDILGNEILIYYLL-FYANITIGDNIIN-----TFIRI 99
N ++ GK E K +M+GN+++G E+++Y+L+ GD + N T + +
Sbjct: 89 TENPGVHVPGKPEFKYVANMHGNEVVGKEMVLYFLVALCEEYKRGDKLANFIVSQTRVHV 148
Query: 98 LPSNHP 81
LPS +P
Sbjct: 149 LPSMNP 154
>gi|1750208 (U37581) carboxypeptidase E-1 [Aplysia californica] >gi|1750212
(U37755) carboxypeptidase E-1 [Aplysia californica]
Length = 561
Score = 31.3 bits (69), Expect = 8.9
Identities = 32/109 (29%), Positives = 58/109 (52%), Gaps = 17/109 (15%)
Query: 407 EENGTKKKDNGVVSNLDYKAKLDDGENTEFTINSLEYNGIRIAN--------GNCDADYG 252
EENG+KK ++ + + Y+ + + + +N RI N N
Sbjct: 33 EENGSKKTESTIFFHHTYEEMV----SLMYEVNKACPEVTRIYNLSEPSVEKRNLTVLEI 88
Query: 251 FSNLKLNDQGKFEGK---DMNGNDILGNEILIYYLL-FYANITIGDNIIN-----TFIRI 99
N ++ GK E K +M+GN+++G E+++Y+L+ GD + N T + +
Sbjct: 89 TENPGVHVPGKPEFKYVANMHGNEVVGKEMVLYFLVALCEEYKRGDKLANFIVSQTRVHV 148
Query: 98 LPSNHP 81
LPS +P
Sbjct: 149 LPSMNP 154
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Apr 17, 1999 5:33 AM
Number of letters in database: 113,023,754
Number of sequences in database: 369,800
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 137544565
Number of Sequences: 369800
Number of extensions: 2632333
Number of successful extensions: 8177
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 8169
Number of HSP's gapped (non-prelim): 20
length of query: 280
length of database: 113023754
effective HSP length: 54
effective length of query: 225
effective length of database: 93054554
effective search space: 20937274650
effective search space used: 20937274650
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 69 (31.3 bits)