BLASTX 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 14-9R
         (619 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           368,476 sequences; 112,640,273 total letters

Searching...................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|1171592|emb|CAA64576| (X95276) rps4 [Plasmodium falciparum]         34  1.2


>gi|1171592|emb|CAA64576| (X95276) rps4 [Plasmodium falciparum]
           Length = 208
           
 Score = 33.6 bits (75), Expect = 1.2
 Identities = 52/163 (31%), Positives = 79/163 (47%), Gaps = 20/163 (12%)

Query: 97  SIFKLKRSLKSKIFVMYN*YNFTKQRTIKYQVEIENKKF*NVKILL*KARNLSLFSYLS* 276
           S F LK  LK   ++ YN Y  T ++ + Y  +I+NK    +   L K   L L  +L  
Sbjct: 40  SYFDLK--LKFIRYICYN-YCITYKKYLYYLNKIDNKNINILYFKLLKILELRLDIFLV- 95

Query: 277 NISSKKSLF-----------LIIKVINQYKNI*XA---------EIRNIPIKKLW*YNII 396
           NI   K++             I  +IN+Y NI            +I+ I +K L  Y   
Sbjct: 96  NIGFFKTILQSRYYIKYKNIYINNIINKYYNINLKNNDILFFNNKIKYIILKNLI-YKYN 154

Query: 397 IYXYVSLLFN*KVRVYLGYS**GNEKYIIKSKKR*LCLQYAYLKNVIVLINRLLNDIIIC 576
           IY Y+S L+         Y+     KY I      +C+    +K  I+ IN +LN+I+  
Sbjct: 155 IYIYISNLYKYNFIKIYSYN-----KYFI------ICIYNFKIK--ILNINNILNNILYI 201

Query: 577 YNN 585
           YN+
Sbjct: 202 YND 204


  Database: Non-redundant GenBank CDS
  translations+PDB+SwissProt+SPupdate+PIR
    Posted date:  Apr 12, 1999 12:54 PM
  Number of letters in database: 112,640,273
  Number of sequences in database:  368,476
  
Lambda     K      H
   0.318    0.135     0.00 

Gapped
Lambda     K      H
   0.270   0.0470 4.94e-324 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88202780
Number of Sequences: 368476
Number of extensions: 1430368
Number of successful extensions: 2132
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2131
Number of HSP's gapped (non-prelim): 2
length of query: 206
length of database: 112640273
effective HSP length: 53
effective length of query: 152
effective length of database: 93111045
effective search space: 14152878840
effective search space used: 14152878840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 67 (30.5 bits)