BLASTX 2.0.8 [Jan-05-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 14-6R2
(718 letters)
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
369,800 sequences; 113,023,754 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|417928|sp|P32776|TFB1_YEAST RNA POLYMERASE II TRANSCRIPTION F... 41 0.009
gi|4493894|emb|CAB39003| (AL034558) predicted using hexExon; MAL... 38 0.057
gi|4100186|gb|AAD00774| (U95159) gelsolin-related protein GRP125... 36 0.29
gi|1075988|pir||S49429 hypothetical protein - Lactobacillus helv... 35 0.64
gi|1708315|sp|P15108|HS83_YEAST HEAT SHOCK COGNATE PROTEIN HSC82... 34 1.4
gi|171723 (M26044) hsc82 protein [Saccharomyces cerevisiae] 34 1.4
gi|113005|sp|P22620|ABRA_PLAFC 101 KD MALARIA ANTIGEN (P101) (AC... 34 1.4
gi|113007|sp|P23745|ABRA_PLAFG 101 KD MALARIA ANTIGEN (P101) (AC... 34 1.4
gi|539218|pir||S38038 hypothetical protein YKL201c - yeast (Sacc... 33 1.9
gi|2980817|emb|CAA82046| (Z28201) ORF YKL201c [Saccharomyces cer... 33 1.9
gi|2746308 (AF037218) unknown [Human herpesvirus 7] 33 1.9
gi|3043712|dbj|BAA25520| (AB011166) KIAA0594 protein [Homo sapiens] 33 1.9
gi|3915759|sp|P36044|MNN4_YEAST MNN4 PROTEIN >gi|1752736|dbj|BAA... 33 1.9
gi|3649763|emb|CAB11112| (Z98547) predicted using hexExon; MAL3P... 33 2.5
gi|3878436|emb|CAB04590| (Z81568) predicted using Genefinder [Ca... 33 2.5
gi|3845272 (AE001417) hypothetical protein [Plasmodium falciparum] 33 2.5
gi|731046|sp|P40818|UBPY_HUMAN PROBABLE UBIQUITIN CARBOXYL-TERMI... 33 2.5
gi|4467113|emb|CAB37547| (AL035538) hypothetical protein [Arabid... 32 3.3
gi|3462840 (AF083875) M protein [Streptococcus pyogenes] 32 3.3
gi|2981486 (AF053464) M protein [Streptococcus pyogenes] 32 3.3
gi|3426021|dbj|BAA32395| (AB016836) heat shock 70 kD protein cog... 32 3.3
gi|3328231 (AF051784) 14S cohesin SMC1 subunit; SMC protein [Xen... 32 3.3
gi|2496852|sp|Q11102|YL17_CAEEL HYPOTHETICAL 131.5 KD PROTEIN C0... 32 3.3
gi|2127671|pir||S70793 vsaE2 protein - Mycoplasma pulmonis (SGC3... 32 4.3
gi|2127670|pir||S70797 vsaE1 protein - Mycoplasma pulmonis (SGC3... 32 4.3
gi|2507061|sp|P32489|MEI5_YEAST MEIOSIS PROTEIN 5 >gi|2132336|pi... 32 4.3
gi|2213862 (AF003086) PfSNF2L [Plasmodium falciparum] 32 4.3
gi|83995|pir||C26696 hypothetical protein (CYb-COII intergenic r... 32 4.3
gi|348317|pir||A45612 ATPase 6 - Sauroleishmania tarentolae >gi|... 32 4.3
gi|2127600|pir||JC6009 surface-located membrane protein lmp3 - M... 32 4.3
gi|3758862|emb|CAB11147| (Z98551) predicted using hexExon; MAL3P... 32 5.6
gi|76319|pir||QQSA8T hypothetical protein B-189 - Staphylococcus... 32 5.6
gi|3845304 (AE001423) replication factor C, 140 kDa subunit (ATP... 32 5.6
gi|1722830|sp|P52531|VU79_HSV7J PROTEIN U79 >gi|1139680 (U43400)... 32 5.6
gi|3845099 (AE001373) predicted secreted protein [Plasmodium fal... 32 5.6
gi|4156029 (AE001563) TYPE III RESTRICTION ENZYME [Helicobacter ... 32 5.6
gi|477226|pir||A48426 heat shock protein HSP82 - maize >gi|30008... 32 5.6
gi|729771|sp|Q08277|HS82_MAIZE HEAT SHOCK PROTEIN 82 32 5.6
gi|1041785 (U36927) rhoptry protein [Plasmodium yoelii] 32 5.6
gi|2982196|gb|AAC06348| (AF007865) bacitracin synthetase 3; BacC... 32 5.6
gi|2496111|sp|Q58135|Y725_METJA HYPOTHETICAL PROTEIN MJ0725 >gi|... 32 5.6
gi|1346789|sp|P03864|PRE3_STAAU PLASMID RECOMBINATION ENZYME (MO... 32 5.6
gi|1052999 (U38428) recombination protein [Staphylococcus aureus] 32 5.6
gi|2979546 (AC003680) unknown protein [Arabidopsis thaliana] 32 5.6
gi|4176527|emb|CAA22883| (AL035263) hypothetical protein [Schizo... 31 7.3
gi|3913894|sp|O67825|IF2_AQUAE TRANSLATION INITIATION FACTOR IF-... 31 7.3
gi|1771158|emb|CAA69181| (Y07861) MFP1 protein [Lycopersicon esc... 31 7.3
gi|3257342|dbj|BAA30025| (AP000004) 879aa long hypothetical puri... 31 7.3
gi|133615|sp|P28976|RRPL_TSWV1 RNA-DIRECTED RNA POLYMERASE (L PR... 31 7.3
gi|1289512 (U53861) slow myosin heavy chain 3 [Coturnix coturnix... 31 7.3
gi|3874633|emb|CAA92287| (Z68159) C33D9.6 [Caenorhabditis elegans] 31 9.6
gi|127774|sp|P08799|MYS2_DICDI MYOSIN II HEAVY CHAIN, NON MUSCLE... 31 9.6
gi|3649767|emb|CAB11116| (Z98547) predicted using hexExon; MAL3P... 31 9.6
gi|2501586|sp|Q94480|V136_DICDI VEG136 PROTEIN >gi|1513300 (U665... 31 9.6
gi|3041708|sp|P13540|MYSB_MESAU MYOSIN HEAVY CHAIN, CARDIAC MUSC... 31 9.6
gi|2314701|gb|AAD08561| (AE000650) type III restriction enzyme R... 31 9.6
gi|2501243|sp|Q00313|TOP1_CANAL DNA TOPOISOMERASE I >gi|1465731 ... 31 9.6
gi|482393|pir||A45669 neurofilament triplet M protein - rat >gi|... 31 9.6
gi|476355|pir||A46762 myosin alpha heavy chain, cardiac muscle -... 31 9.6
gi|3915779|sp|P13539|MYSA_MESAU MYOSIN HEAVY CHAIN, CARDIAC MUSC... 31 9.6
gi|4493946|emb|CAB38982| (AL034556) predicted using hexExon; MAL... 31 9.6
gi|127741|sp|P02563|MYSA_RAT MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ... 31 9.6
gi|3880432|emb|CAA91398| (Z66521) similar to kinensin-like prote... 31 9.6
gi|191618 (M76598) alpha cardiac myosin heavy chain [Mus musculus] 31 9.6
gi|3024204|sp|Q02566|MYSA_MOUSE MYOSIN HEAVY CHAIN, CARDIAC MUSC... 31 9.6
gi|416720|sp|P32985|BPS2_DESAM BPS2 PROTEIN >gi|99246|pir||S2219... 31 9.6
gi|542637|pir||S39599 class I histocompatibility antigen - Afric... 31 9.6
>gi|417928|sp|P32776|TFB1_YEAST RNA POLYMERASE II TRANSCRIPTION FACTOR B 73 KD SUBUNIT
>gi|320862|pir||S31285 RNA polymerase II transcription
factor B 73K chain - yeast (Saccharomyces cerevisiae)
>gi|172889 (M95750) RNA polymerase II transcription
factor b, 73 kDa subunit [Saccharomyces cerevisiae]
>gi|849210 (U28374) Tfb1: RNA Polymerase II
transcription factor B 73 kD subunit (Swiss Prot.
accession number P32776) [Saccharomyces cerevisiae]
Length = 642
Score = 41.0 bits (94), Expect = 0.009
Identities = 23/93 (24%), Positives = 41/93 (43%)
Query: 285 NNEEDEINTHKNTIEIDDTKEETKTNIKTSDLTLXXXXXXXXXXXXXXXXTFKDIKYKIE 464
N+EEDE N +N ++IDD E KTN L + K+ K+
Sbjct: 406 NDEEDEDNDERNELKIDDLNESYKTNYAIIHLKRNAHEKTTDNDAKSSADSIKNADLKVS 465
Query: 465 DEEYLRKILFKIFSDNLAVKIGSEYFYKNKKIT 563
+++ L+++ + DNL K+ N +++
Sbjct: 466 NQQMLQQL--SLVMDNLINKLDLNQVVPNNEVS 496
>gi|4493894|emb|CAB39003| (AL034558) predicted using hexExon; MAL3P2.16 (PF0235w), Hypothetical
protein, len: 1214 aa [Plasmodium falciparum]
Length = 1213
Score = 38.3 bits (87), Expect = 0.057
Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 34/195 (17%)
Query: 84 YVEDEKSEVISKLRIIIEYLENDNKDKF----------------CEDRKIKKKRIEDVLK 215
+ D+ ++++ ++ + +EN K+K E+ KIK K E+ +K
Sbjct: 541 HTNDDVTKLLDEINDLKNTIENMKKEKINLLSKFKAYTLNNKKELEELKIKCKNKEEQIK 600
Query: 216 LSFQLIKIKESIDLRKTSEVK-----------RINNEEDEINTHKNTIEIDDTKEETKTN 362
+ ++ KE + +E++ +++N+E+EI + N EI + +EE
Sbjct: 601 MYENKLQNKEDEIMNYVNEIQNKDKKIESYHIKLHNKEEEIMNYVN--EIQNKEEEI--- 655
Query: 363 IKTSDLTLXXXXXXXXXXXXXXXXTFKDIKYKIEDE-EYLRKILFKIFSDNLAVKIGSEY 539
IK + K+ K+E E L + KI +N +KI E
Sbjct: 656 IKYVNELQNSDVQKEKKELKTINEVLKNTNEKLEKEITSLLGEMKKIEEENKVLKIFKEE 715
Query: 540 FYK--NKKIT-FSNDFITTEKYIVFEHLITSNK---KTIVQNVTVIEES 668
K N+K+T D I + + F+ ++ NK K +V + ++EE+
Sbjct: 716 KNKINNEKVTQIKGDDINDDNDMKFKQILLDNKTFNKLLVNELNIVEEN 764
Score = 33.2 bits (74), Expect = 1.9
Identities = 51/176 (28%), Positives = 87/176 (48%), Gaps = 41/176 (23%)
Query: 156 KDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKT-----------SEVKRINNE--- 293
K+K + I KK ED+ K ++ K K + + +T +E+K +NN
Sbjct: 825 KNKQMNELYILKKEKEDIYK-EYEEYKKKVTSLINETNYNYKNIEEKENEIKELNNTLNK 883
Query: 294 -EDEINTHKNTI----------EIDDTKEET---KTNIKTSDLTLXXXXXXXXXXXXXXX 431
++E+N +K I EI+ KE+ + N+ SDL
Sbjct: 884 YKEEMNNYKEEIIVINEKYKLLEIELCKEKNIRDQQNVGISDLKKKMLKEKIELEKKYKE 943
Query: 432 XTFKDIKYKIEDEEYLRKILFKIFSDNLAVKIGSEYFYKNKKITFSND-----------F 578
K+ + KI D + + KI D + + +K +K+TFSND +
Sbjct: 944 QYEKETQQKINDMKIIFDNKEKILQDQI-----DDLLHKIEKLTFSNDEKTKTIENLQIY 998
Query: 579 ITTEKYIVFEHLITSN-KKTIVQN-VTVIEESWFEYI 683
+ + I+ + I N KK I+ N + E+ YI
Sbjct: 999 MDNDDNIMNQEGIQKNEKKQIIDNPINTDEKDLLNYI 1035
>gi|4100186|gb|AAD00774| (U95159) gelsolin-related protein GRP125 [Dictyostelium discoideum]
Length = 1087
Score = 36.0 bits (81), Expect = 0.29
Identities = 26/100 (26%), Positives = 53/100 (53%)
Query: 81 KYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLR 260
K VE+ K EV E ++ + K++ ++ ++K++ +++V K + +IKE ++
Sbjct: 748 KIVEEVKEEVKE------EDVKEEVKEEEVKEEEVKEEEVKEVAKEETKE-EIKEEVNDE 800
Query: 261 KTSEVKRINNEEDEINTHKNTIEIDDTKEETKTNIKTSDL 380
T EVK +N E+E+ ++ KEE K +K ++
Sbjct: 801 AT-EVKEVNQVEEEVKE-------EEVKEEVKVEVKEEEV 832
Score = 35.2 bits (79), Expect = 0.49
Identities = 24/91 (26%), Positives = 50/91 (54%)
Query: 90 EDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTS 269
E+ K EV K+ + E ++ + K++ ++ ++K++ +++ +K + ++KE + K
Sbjct: 817 EEVKEEV--KVEVKEEEVKGEAKEEEVKEEEVKEEEVKEEVKEVKE--EVKEEVKQDKEE 872
Query: 270 EVKRINNEEDEINTHKNTIEIDDTKEETKTN 362
EV NEE + T + + DD KE+ K N
Sbjct: 873 EV----NEEIKEETKEEETKEDDNKEDEKVN 899
Score = 31.3 bits (69), Expect = 7.3
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 69 DYKRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIK--IK 242
D K + E+E E K + E + + K++ E+ + +++V ++ ++ + +K
Sbjct: 761 DVKEEVKEEEVKEEEVKEEEVKEVAKEETKEEIKEEVNDEATEVKEVNQVEEEVKEEEVK 820
Query: 243 ESIDLR-KTSEVKRINNEED----EINTHKNTIEIDDTKEETKTNIK 368
E + + K EVK EE+ E+ + E+ + KEE K +K
Sbjct: 821 EEVKVEVKEEEVKGEAKEEEVKEEEVKEEEVKEEVKEVKEEVKEEVK 867
>gi|1075988|pir||S49429 hypothetical protein - Lactobacillus helveticus
>gi|558221|emb|CAA57505| (X81981) orf [Lactobacillus
helveticus]
Length = 192
Score = 34.8 bits (78), Expect = 0.64
Identities = 23/102 (22%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 69 DYKRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKES 248
D K+K +E ++I +L+ +++NK+K E +I K+ E++ +L+ ++ K +
Sbjct: 66 DSKKKEDNEELLQMIEQLKAENSKFKSENKEKDEELVRINLKKDEEIRRLNSKIEKYAD- 124
Query: 249 IDLRKTSEVK-RINNEEDEINTH--KNTIEIDDTKEETKTNIKTS 374
D ++ ++ + ++NN++ ++ + T ++ DT++ T+ + S
Sbjct: 125 -DFKEFNDKQLQLNNQQQQLQARILEQTKQLKDTQQRLLTSAEKS 168
>gi|1708315|sp|P15108|HS83_YEAST HEAT SHOCK COGNATE PROTEIN HSC82 >gi|1077176|pir||S55133 heat shock
protein HSP82 - yeast (Saccharomyces cerevisiae)
>gi|854456|emb|CAA89919| (Z49808) Hsc82p [Saccharomyces
cerevisiae]
Length = 705
Score = 33.6 bits (75), Expect = 1.4
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 93 DEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQLIKIKE-SIDLRK 263
DE +E I + ++ +L++D + + E+++IK+ KR + + QL+ KE ++
Sbjct: 161 DEVNERIGRGTVLRLFLKDDQLE-YLEEKRIKEVIKRHSEFVAYPIQLLVTKEVEKEVPI 219
Query: 264 TSEVKRINNEEDEINTHKNTIEIDDTKEETKTNIK 368
E K+ ++DE + E+D+ +EE K K
Sbjct: 220 PEEEKKDEEKKDEDDKKPKLEEVDEEEEEKKPKTK 254
>gi|171723 (M26044) hsc82 protein [Saccharomyces cerevisiae]
Length = 705
Score = 33.6 bits (75), Expect = 1.4
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 93 DEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQLIKIKE-SIDLRK 263
DE +E I + ++ +L++D + + E+++IK+ KR + + QL+ KE ++
Sbjct: 161 DEVNERIGRGTVLRLFLKDDQLE-YLEEKRIKEVIKRHSEFVAYPIQLLVTKEVEKEVPI 219
Query: 264 TSEVKRINNEEDEINTHKNTIEIDDTKEETKTNIK 368
E K+ ++DE + E+D+ +EE K K
Sbjct: 220 PEEEKKDEEKKDEDDKKPKLEEVDEEEEEKKPKTK 254
>gi|113005|sp|P22620|ABRA_PLAFC 101 KD MALARIA ANTIGEN (P101) (ACIDIC BASIC REPEAT ANTIGEN)
>gi|102315|pir||A29232 101K malaria antigen precursor -
Plasmodium falciparum (strain Camp) >gi|160047 (J03902)
p101/acidic basic repeat antigen [Plasmodium falciparum]
Length = 743
Score = 33.6 bits (75), Expect = 1.4
Identities = 22/97 (22%), Positives = 48/97 (48%), Gaps = 9/97 (9%)
Query: 72 YKRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESI 251
YK K + K+ ++ E ++ K++ + +K + ++I +K
Sbjct: 146 YKNKSYNPLLLSCVKKMNMLKENVDYIQKNQNLFKELMNQKATYSFVNTKKKIISLKSQG 205
Query: 252 DLRKTSEVKRINNE---------EDEINTHKNTIEIDDTKEETKTN 362
++TS+ + NN+ ED++N ++T + +DT +E TN
Sbjct: 206 HKKETSQNQNENNDNQKYQEVNDEDDVNDEEDTNDDEDTNDEEDTN 251
>gi|113007|sp|P23745|ABRA_PLAFG 101 KD MALARIA ANTIGEN (P101) (ACIDIC BASIC REPEAT ANTIGEN)
Length = 600
Score = 33.6 bits (75), Expect = 1.4
Identities = 22/97 (22%), Positives = 48/97 (48%), Gaps = 9/97 (9%)
Query: 72 YKRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESI 251
YK K + K+ ++ E ++ K++ + +K + ++I +K
Sbjct: 63 YKNKSYNPLLLSCVKKMNMLKENVDYIQKNQNLFKELMNQKATYSFVNTKKKIISLKSQG 122
Query: 252 DLRKTSEVKRINNE---------EDEINTHKNTIEIDDTKEETKTN 362
++TS+ + NN+ ED++N ++T + +DT +E TN
Sbjct: 123 HKKETSQNQNENNDNQKYQEVNDEDDVNDEEDTNDDEDTNDEEDTN 168
>gi|539218|pir||S38038 hypothetical protein YKL201c - yeast (Saccharomyces cerevisiae)
Length = 539
Score = 33.2 bits (74), Expect = 1.9
Identities = 29/101 (28%), Positives = 52/101 (50%), Gaps = 4/101 (3%)
Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESID 254
K+K E+EK + + + + E + K K E+ K KKK E+ K + K KE +
Sbjct: 411 KKKKEEEEKKKKEEEEK---KKKEEEEKKKKEEEEK-KKKEEEEKKKQEEEEKKKKEEEE 466
Query: 255 LRKTSEVKRINNEEDE----INTHKNTIEIDDTKEETKTNIKTSD 377
+K E +++ NE++E + K E ++ K++ + N K D
Sbjct: 467 KKKQEEGEKMKNEDEENKKNEDEEKKKNEEEEKKKQEEKNKKNED 511
Score = 31.7 bits (70), Expect = 5.6
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESID 254
+RK E +K E K + E + K K E+ K KKK E+ K + K KE +
Sbjct: 397 ERKRREKKKKEEEEKKK-----KEEEEKKKKEEEEK-KKKEEEEKKKKEEEEKKKKEEEE 450
Query: 255 LRKTSEVKRINNEEDEINTHKNTIEIDDTKEETKTN 362
+K E ++ EE+E + ++ + EE K N
Sbjct: 451 KKKQEEEEKKKKEEEEKKKQEEGEKMKNEDEENKKN 486
>gi|2980817|emb|CAA82046| (Z28201) ORF YKL201c [Saccharomyces cerevisiae]
Length = 660
Score = 33.2 bits (74), Expect = 1.9
Identities = 29/101 (28%), Positives = 52/101 (50%), Gaps = 4/101 (3%)
Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESID 254
K+K E+EK + + + + E + K K E+ K KKK E+ K + K KE +
Sbjct: 532 KKKKEEEEKKKKEEEEK---KKKEEEEKKKKEEEEK-KKKEEEEKKKQEEEEKKKKEEEE 587
Query: 255 LRKTSEVKRINNEEDE----INTHKNTIEIDDTKEETKTNIKTSD 377
+K E +++ NE++E + K E ++ K++ + N K D
Sbjct: 588 KKKQEEGEKMKNEDEENKKNEDEEKKKNEEEEKKKQEEKNKKNED 632
Score = 31.7 bits (70), Expect = 5.6
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESID 254
+RK E +K E K + E + K K E+ K KKK E+ K + K KE +
Sbjct: 518 ERKRREKKKKEEEEKKK-----KEEEEKKKKEEEEK-KKKEEEEKKKKEEEEKKKKEEEE 571
Query: 255 LRKTSEVKRINNEEDEINTHKNTIEIDDTKEETKTN 362
+K E ++ EE+E + ++ + EE K N
Sbjct: 572 KKKQEEEEKKKKEEEEKKKQEEGEKMKNEDEENKKN 607
>gi|2746308 (AF037218) unknown [Human herpesvirus 7]
Length = 506
Score = 33.2 bits (74), Expect = 1.9
Identities = 24/93 (25%), Positives = 48/93 (50%), Gaps = 2/93 (2%)
Query: 72 YKRKYVEDEKSEVISKLRIIIEYLENDNKDKFCED--RKIKKKRIEDVLKLSFQLIKIKE 245
+++++ E +K + K + + + + ++ K ED +K +KKR++D K Q + E
Sbjct: 145 FEKEHAERKKQDDDYKKKALKQKDKRRSEQKILEDCDKKDEKKRMDDTEKRKLQEDRRNE 204
Query: 246 SIDLRKTSEVKRINNEEDEINTHKNTIEIDDTKEE 350
DL+K + ED+ K +E D +KE+
Sbjct: 205 KQDLKKRVDDTEKRKLEDDRRNEKQDLE-DASKEK 238
>gi|3043712|dbj|BAA25520| (AB011166) KIAA0594 protein [Homo sapiens]
Length = 882
Score = 33.2 bits (74), Expect = 1.9
Identities = 28/104 (26%), Positives = 57/104 (53%), Gaps = 18/104 (17%)
Query: 75 KRKYVEDEKSEVISKLRII-------------IEYLENDNKDKFCE--DRKIKKKRIEDV 209
+R+++E++ E+ KL+ + +E+ +N+ + K E +RK KK+++E
Sbjct: 432 QRRHLEEQLKEIHRKLQAVDSGLIALRETSKHLEHKDNELRQKKKELLERKTKKRQLEQK 491
Query: 210 LKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTIEIDDT---KEETKTNIKTSDL 380
+ +K+ E E ++ + + EIN K + + T K T +I+ DL
Sbjct: 492 ISSKLGSLKLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTNLIKICTSLHIQKVDL 551
Query: 381 TL 386
L
Sbjct: 552 IL 553
>gi|3915759|sp|P36044|MNN4_YEAST MNN4 PROTEIN >gi|1752736|dbj|BAA11676| (D83006) gene required for
phosphoylation of oligosaccharides/ has high homology
with YJR061w [Saccharomyces cerevisiae]
Length = 1178
Score = 33.2 bits (74), Expect = 1.9
Identities = 29/101 (28%), Positives = 52/101 (50%), Gaps = 4/101 (3%)
Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESID 254
K+K E+EK + + + + E + K K E+ K KKK E+ K + K KE +
Sbjct: 1050 KKKKEEEEKKKKEEEEK---KKKEEEEKKKKEEEEK-KKKEEEEKKKQEEEEKKKKEEEE 1105
Query: 255 LRKTSEVKRINNEEDE----INTHKNTIEIDDTKEETKTNIKTSD 377
+K E +++ NE++E + K E ++ K++ + N K D
Sbjct: 1106 KKKQEEGEKMKNEDEENKKNEDEEKKKNEEEEKKKQEEKNKKNED 1150
Score = 31.7 bits (70), Expect = 5.6
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESID 254
+RK E +K E K + E + K K E+ K KKK E+ K + K KE +
Sbjct: 1036 ERKRREKKKKEEEEKKK-----KEEEEKKKKEEEEK-KKKEEEEKKKKEEEEKKKKEEEE 1089
Query: 255 LRKTSEVKRINNEEDEINTHKNTIEIDDTKEETKTN 362
+K E ++ EE+E + ++ + EE K N
Sbjct: 1090 KKKQEEEEKKKKEEEEKKKQEEGEKMKNEDEENKKN 1125
>gi|3649763|emb|CAB11112| (Z98547) predicted using hexExon; MAL3P3.12 (PFC0385c),
Serine/threonine protein kinase, len: 1640 aa; Similarity
to serine/threonine protein kinases. M.musculus
serine/threonine protein kinase AIE1 (TR:O88445) BLAST
Score: 5...
Length = 1639
Score = 32.8 bits (73), Expect = 2.5
Identities = 41/189 (21%), Positives = 77/189 (40%), Gaps = 5/189 (2%)
Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESID 254
K+ Y + EK + K +++ DN +D K +I D ++ K K ++
Sbjct: 922 KKNYKDKEKISTLEKK----VFVKKDNVITNNDDEKHTSSKINDDFNITID--KQKGKLN 975
Query: 255 LRKTSEVKRINNEEDEINTHKNTI-EIDDTKEETKTNIKTSDLTLXXXXXXXXXXXXXXX 431
++I NE + K+ + +I + + KTN T++ +
Sbjct: 976 NNPVDLNRKIKNETKILEKDKSHMSKIQNNLMKKKTNFPTNNKGISSTSISSSSTK---- 1031
Query: 432 XTFKDIKYKIEDEEYLRKILFKIFSDNL---AVKIGSEY-FYKNKKITFSNDFITTEKYI 599
FKD IE + L + + + + ++K+ + YK+KK T ND K +
Sbjct: 1032 -NFKDCGI-IEKNKNLSNLKYTCIRNKMNVDSIKLNDKADLYKDKKKTSFNDINRAAKGM 1089
Query: 600 VFEHLITSNKKTIV 641
F+ NK +V
Sbjct: 1090 NFKKRDVPNKNNMV 1103
>gi|3878436|emb|CAB04590| (Z81568) predicted using Genefinder [Caenorhabditis elegans]
Length = 276
Score = 32.8 bits (73), Expect = 2.5
Identities = 23/75 (30%), Positives = 40/75 (52%)
Query: 132 IEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINT 311
+E + ++K E++ KKK ++ K + K E + +KT+E K NNE+ + N
Sbjct: 66 VEKKKEKGEEKEEEEKGEKKKEDKEEKKDDSKEDKKDEDHEKKKTAEEKE-NNEKKDENK 124
Query: 312 HKNTIEIDDTKEETK 356
+KN E D K++ K
Sbjct: 125 NKNKDERKDEKKDEK 139
>gi|3845272 (AE001417) hypothetical protein [Plasmodium falciparum]
Length = 980
Score = 32.8 bits (73), Expect = 2.5
Identities = 21/78 (26%), Positives = 42/78 (52%), Gaps = 5/78 (6%)
Query: 144 ENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINT---- 311
E ++K K ED ++KK+ + LK IK K + T+E+ ++N+ +E+N
Sbjct: 382 EKEDKIKNLEDDLLEKKKCIENLKDELINIKKKMEDKMHMTNEMDLLSNKVEELNRINKT 441
Query: 312 -HKNTIEIDDTKEETKTNIKTSD 377
KN +E+++ + K + +
Sbjct: 442 YEKNIVELNNELDVIKKKLNDEE 464
>gi|731046|sp|P40818|UBPY_HUMAN PROBABLE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE (UBIQUITIN
THIOLESTERASE) (UBIQUITIN-SPECIFIC PROCESSING PROTEASE)
(DEUBIQUITINATING ENZYME) (KIAA0055)
>gi|473945|dbj|BAA06225| (D29956) This gene is similar
to tre oncogene(X63547). [Homo sapiens]
Length = 1118
Score = 32.8 bits (73), Expect = 2.5
Identities = 23/94 (24%), Positives = 51/94 (53%)
Query: 96 EKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEV 275
EK++ +LR + + + K +++K KKK+ + +++ + K KE ++ +++ +
Sbjct: 474 EKNKQEKELRERQQEEQKEKLRKEEQEQKAKKKQEAEENEITEKQQKAKEEMEKKESEQA 533
Query: 276 KRINNEEDEINTHKNTIEIDDTKEETKTNIKTSD 377
K+ ED+ + K EI K ++K+ +TSD
Sbjct: 534 KK----EDKETSAKRGKEITGVKRQSKSEHETSD 563
>gi|4467113|emb|CAB37547| (AL035538) hypothetical protein [Arabidopsis thaliana]
Length = 1496
Score = 32.5 bits (72), Expect = 3.3
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 69 DYKRKYVEDEKSEVISKLRII-IEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKE 245
+YK E EK V+ + +I +E N+N + C I ++ + ++ + L++ E
Sbjct: 594 EYKEMLEESEKCRVLLEEQISQLESDSNENIRELCSKVDIAYAKLAEEVEKTASLVRKSE 653
Query: 246 SIDLRKTSEVKRINNEEDEINTHKNTIEIDDTKEETKTNI 365
SIDL + + + E++ +K +E E TKT +
Sbjct: 654 SIDLNE-------EHRQRELDHYKEMLE-----ESTKTQL 681
>gi|3462840 (AF083875) M protein [Streptococcus pyogenes]
Length = 194
Score = 32.5 bits (72), Expect = 3.3
Identities = 14/53 (26%), Positives = 31/53 (58%)
Query: 189 KKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTIEIDDTKE 347
+K+ +++ L+ + K+K+ ++L + + +++EE E+N KN D KE
Sbjct: 72 QKKEQELKNLNDNVKKLKDEVELERLKNERHVHDEEAELNRLKNERHDHDKKE 124
>gi|2981486 (AF053464) M protein [Streptococcus pyogenes]
Length = 154
Score = 32.5 bits (72), Expect = 3.3
Identities = 20/71 (28%), Positives = 39/71 (54%)
Query: 135 EYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTH 314
+ L+++NK D + K++ +ED L + K+K++ +L + + +++EE E+N
Sbjct: 55 DQLKSENKG-LKTDLQEKERELED---LKGDVEKLKDAAELERLKNERHVHDEEAELNRL 110
Query: 315 KNTIEIDDTKE 347
KN D KE
Sbjct: 111 KNERHDHDKKE 121
>gi|3426021|dbj|BAA32395| (AB016836) heat shock 70 kD protein cognate [Bombyx mori]
Length = 658
Score = 32.5 bits (72), Expect = 3.3
Identities = 17/45 (37%), Positives = 30/45 (65%)
Query: 81 KYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLK 215
K +D+K+++ L I++LE DN+D E+ K +KK +EDV++
Sbjct: 587 KVTDDDKAKMEEALDAAIKWLE-DNQDAESEEYKKQKKTLEDVVQ 630
>gi|3328231 (AF051784) 14S cohesin SMC1 subunit; SMC protein [Xenopus laevis]
Length = 1232
Score = 32.5 bits (72), Expect = 3.3
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 99 KSEVISKLRIIIEYLENDNKDKFCEDRKI---KKKRIEDVLKLSFQLIKIKESIDLRKTS 269
K E + + + LE N+D+ + ++ ++K++E K+ +L +++E+
Sbjct: 379 KEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLRELEEN------- 431
Query: 270 EVKRINNEEDEINTHKNTIEIDDTKEETKT 359
KRI E+ I T K ++E EET T
Sbjct: 432 -QKRIEKLEEYIATSKQSLEEQKNLEETLT 460
>gi|2496852|sp|Q11102|YL17_CAEEL HYPOTHETICAL 131.5 KD PROTEIN C02F12.7 IN CHROMOSOME X >gi|1109896
(U41545) coded for by C. elegans cDNA yk4b2.5; coded for
by C. elegans cDNA CEESN67F; coded for by C. elegans
cDNA yk94h12.5; coded for by C. elegans cDNA CEESD93F;
coded for by C. elegans cDNA CEESG57F; coded for by C.
elegans cDNA yk4b2.3;...
Length = 1130
Score = 32.5 bits (72), Expect = 3.3
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 96 EKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESI-------- 251
EKS + +++R++ + +E++ +D E K +ED +L+ L + +E I
Sbjct: 539 EKSILAAEIRVLTQKIEDEEQDDITEQLA---KIVEDTSQLTRTLEEYRERITGKDAEIL 595
Query: 252 DLRKTSEVKRINNEEDEINTHKNTIEIDDTKEETKT 359
+LRK E + + E+ H+NT + + +ET T
Sbjct: 596 NLRKQLEKEISHTEDRNRLLHENTQKELEAHKETHT 631
>gi|2127671|pir||S70793 vsaE2 protein - Mycoplasma pulmonis (SGC3) (fragment) >gi|780768
(U23947) VsaE2 lipoprotein [Mycoplasma pulmonis]
>gi|1586796|prf||2204375D vsaE2 gene [Mycoplasma
pulmonis]
Length = 309
Score = 32.1 bits (71), Expect = 4.3
Identities = 23/85 (27%), Positives = 41/85 (48%)
Query: 90 EDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTS 269
ED+K V +K+ L + +DKF + K ++ED+ K ++ KE+I+ +
Sbjct: 229 EDQKKSVFTKIE-----LTKEQEDKFKNVIQDAKVKLEDLTKKLEKIKSEKENIEKKLDP 283
Query: 270 EVKRINNEEDEINTHKNTIEIDDTK 344
+K + +IN E+D TK
Sbjct: 284 IIKELKERLKKIN------ELDSTK 302
>gi|2127670|pir||S70797 vsaE1 protein - Mycoplasma pulmonis (SGC3) (fragment) >gi|780772
(U23947) VsaE1 protein [Mycoplasma pulmonis]
>gi|1586800|prf||2204375H vsaE1 gene [Mycoplasma
pulmonis]
Length = 237
Score = 32.1 bits (71), Expect = 4.3
Identities = 23/85 (27%), Positives = 41/85 (48%)
Query: 90 EDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTS 269
ED+K V +K+ L + +DKF + K ++ED+ K ++ KE+I+ +
Sbjct: 157 EDQKKSVFTKIE-----LTKEQEDKFKNVIQDAKVKLEDLTKKLEKIKSEKENIEKKLDP 211
Query: 270 EVKRINNEEDEINTHKNTIEIDDTK 344
+K + +IN E+D TK
Sbjct: 212 IIKELKERLKKIN------ELDSTK 230
>gi|2507061|sp|P32489|MEI5_YEAST MEIOSIS PROTEIN 5 >gi|2132336|pir||S62001 MEI5 protein - yeast
(Saccharomyces cerevisiae) >gi|1163093 (U43503)
Mei5p,Lph6p [Saccharomyces cerevisiae]
Length = 222
Score = 32.1 bits (71), Expect = 4.3
Identities = 37/117 (31%), Positives = 59/117 (49%), Gaps = 16/117 (13%)
Query: 12 LKNTPNILFLLCAVLDCXXDYKRKYVEDEKSEVISKLRIIIE----YLENDN-------- 155
L+ N L C +L + K +E+ KS I K R I E ++ N
Sbjct: 68 LRQENNHLQQACKILS-----ENKIIENRKS--IEKWRTICEMELSFILNSTLIKINRMG 120
Query: 156 --KDKFCEDRKIKKKRIEDVLK--LSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNT 323
KD ++ + KK+R+E + + Q+ +IKES D R+ SEV++ E ++N
Sbjct: 121 GYKDFLEKEMEAKKRRLEYQIDNGMEDQICEIKESDDFRQLSEVEK-QEWESQMNEQLKE 179
Query: 324 IEIDDTKEETKTN 362
+E E K N
Sbjct: 180 LEKKKIAELEKLN 192
>gi|2213862 (AF003086) PfSNF2L [Plasmodium falciparum]
Length = 1422
Score = 32.1 bits (71), Expect = 4.3
Identities = 17/46 (36%), Positives = 31/46 (66%), Gaps = 1/46 (2%)
Query: 234 KIKESIDLRKTSEVKRINNEEDEINTHK-NTIEIDDTKEETKTNIKT 371
++ +++ RK +E+ NNEEDE K +++E++D KE+ TN+ T
Sbjct: 131 QMNDNMKKRKLNEISYDNNEEDEFRNKKDDSMEMND-KEKGSTNMST 176
>gi|83995|pir||C26696 hypothetical protein (CYb-COII intergenic region) - Sauroleishmania
tarentolae mitochondrion (SGC6)
Length = 211
Score = 32.1 bits (71), Expect = 4.3
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 691 FI*MYSNQLSS-------ITVTF*TIVFLLLVIKCSKTIYFSVVIKSLLKVIFLFL*KYS 533
F+ M+ N LSS + I+F L I C IYF + ++L I +L Y+
Sbjct: 122 FLRMFCNLLSSHFLMLMFCDFVYFFIIFFLFFIMCD-FIYFIIFTFAMLFCIIFYLFLYA 180
Query: 532 LPIFTAKLSLKILNNIFLR 476
L +F A L + I N+ ++
Sbjct: 181 LDMFCALLQIFIFCNMIMQ 199
>gi|348317|pir||A45612 ATPase 6 - Sauroleishmania tarentolae >gi|340586 (M33229) ATPase 6
[Leishmania tarentolae] >gi|340615 (L07543) MURF4
[Leishmania tarentolae]
Length = 232
Score = 32.1 bits (71), Expect = 4.3
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 691 FI*MYSNQLSS-------ITVTF*TIVFLLLVIKCSKTIYFSVVIKSLLKVIFLFL*KYS 533
F+ M+ N LSS + I+F L I C IYF + ++L I +L Y+
Sbjct: 143 FLRMFCNLLSSHFLMLMFCDFVYFFIIFFLFFIMCD-FIYFIIFTFAMLFCIIFYLFLYA 201
Query: 532 LPIFTAKLSLKILNNIFLR 476
L +F A L + I N+ ++
Sbjct: 202 LDMFCALLQIFIFCNMIMQ 220
>gi|2127600|pir||JC6009 surface-located membrane protein lmp3 - Mycoplasma hominis (SGC3)
>gi|1197336|emb|CAA64858| (X95601) Lmp3 protein
[Mycoplasma hominis]
Length = 1302
Score = 32.1 bits (71), Expect = 4.3
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 6/119 (5%)
Query: 9 NLKNTPNILFLLCAVLDCXXDYKRKYVEDEKSEVISKLRIIIEYLENDN--KDKFCEDRK 182
++KN PN L+ + + D K KSE+I+ + + L+ KD+ E K
Sbjct: 581 DVKNNPNYATLVKDLTNAKDDKKSVTKSSNKSEIIAANDELKQALDKAKVAKDQIDEANK 640
Query: 183 IKKKRIEDVL----KLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTIEIDDTKEE 350
K+++ D + +L +L+ + I KT + I + E+N + N + KE
Sbjct: 641 SIKEQLSDSITNANQLLNKLVDSDKDIQKAKTELSQEIQSASQELNLN-NPTSMQSAKES 699
Query: 351 TKTNI 365
+
Sbjct: 700 LDAKV 704
Score = 31.7 bits (70), Expect = 5.6
Identities = 28/111 (25%), Positives = 59/111 (52%), Gaps = 14/111 (12%)
Query: 12 LKNTPNILFLLCAVLDCXXDYKRKYVEDEKSEVISKLRIIIEYLENDN--KDKFCEDRKI 185
+KN PN L+ + + K KS++I+ +I+ L + N KD+ E K
Sbjct: 424 VKNNPNYATLVKDLTNAKDAKKSVTNSSNKSDIIAANEALIQALADANKAKDQVDEANKS 483
Query: 186 KKKRIEDVLKLS-----------FQLIKIKESIDLRKTSEVKRIN-NEEDEINTHKNTIE 329
K+++ ++ + +++K KES++ T+ K +N N+ + + K++++
Sbjct: 484 IKEQLNALIDKANTLLPQLNDNDSEIVKAKESLNAEITNANKAVNQNDNASMQSAKSSLD 543
Query: 330 IDDTK 344
TK
Sbjct: 544 DKVTK 548
Score = 31.3 bits (69), Expect = 7.3
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 16/93 (17%)
Query: 96 EKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIK---ESIDLRKT 266
E+ ++KLR+ ++ L N N + + KK E+ + S + KIK E+++ K
Sbjct: 108 EELNKLNKLRLDLQNLINSNDGQNVDSSDAKKALNENQIDDSLPIDKIKKTNENLENAKK 167
Query: 267 SEVKRINNE--------EDEINTHKNTIEIDDTKE-----ETKTNIKTS 374
+ +IN E ++ K ++++DTKE E K I+T+
Sbjct: 168 ELLNKINAERELQSKIFNEKKQELKRVLDLEDTKEVDFTKEQKVFIETN 216
>gi|3758862|emb|CAB11147| (Z98551) predicted using hexExon; MAL3P6.4 (PFC0715c), Hypothetical
protein, len: 1009 aa [Plasmodium falciparum]
Length = 1008
Score = 31.7 bits (70), Expect = 5.6
Identities = 27/135 (20%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Query: 132 IEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINT 311
I+ E +++ +D + K K+ E+++ +S K + KR+N + ++N
Sbjct: 310 IQRREKKKQEEEKKDEEEKNKKKEELINISDNEKDTKHN---ETNINYKRVNVNDKDVNI 366
Query: 312 HKNTIEIDDTKEETKTNIKTSDLTLXXXXXXXXXXXXXXXXTFKDIK-----------YK 458
H++ I+ KE+T I++ + TF K K
Sbjct: 367 HEDIIKGKKAKEKTDDEIQSEIIEKDISTNYSKDRNVQYLNTFSFDKNNEKLNSEMESLK 426
Query: 459 IEDEEYLRKILFKIFSDNLAVKIGSE 536
+ +++ L K F ++ N+ ++ +E
Sbjct: 427 LYNKKNLSKYFFSLYKGNILKQLVTE 452
>gi|76319|pir||QQSA8T hypothetical protein B-189 - Staphylococcus aureus plasmid pT181
Length = 189
Score = 31.7 bits (70), Expect = 5.6
Identities = 29/87 (33%), Positives = 48/87 (54%), Gaps = 11/87 (12%)
Query: 48 AVLDCXXDYKR----KYVEDEKSEVISK---LRIIIEYLEN--DNKDKFCEDRKIKKKRI 200
A D DY+ + ++D+ E+ K L +E +EN DN ++ E+ K K+ I
Sbjct: 56 AAQDISEDYEYIKSGRALDDKDKEIREKDDLLNKAVERIENADDNFNQLYENAKPLKENI 115
Query: 201 EDVLKLSFQLIKIKESIDLRKT--SEVKRINNEEDEIN 308
E LKL L+K E + R T V ++ +E ++N
Sbjct: 116 EIALKLLKILLKELERVLGRNTFAGRVSKLTEDEPKLN 153
>gi|3845304 (AE001423) replication factor C, 140 kDa subunit (ATPase)
[Plasmodium falciparum]
Length = 904
Score = 31.7 bits (70), Expect = 5.6
Identities = 25/91 (27%), Positives = 43/91 (46%)
Query: 90 EDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTS 269
EDEK V++ L L+NDNK ED K ++ + K ++ + S
Sbjct: 120 EDEKL-VVNNLNDYFNILQNDNK-VTKEDTKSNNVSPKNEIN--------KSNVKRERES 169
Query: 270 EVKRINNEEDEINTHKNTIEIDDTKEETKTN 362
E I++E D +++ KN + K++T+ N
Sbjct: 170 EQYEISSENDTVSSKKNVLISPAKKQKTQNN 200
>gi|1722830|sp|P52531|VU79_HSV7J PROTEIN U79 >gi|1139680 (U43400) similar to U79 of HHV6, GenBank
Accession Number X83413 at the N-terminus [Human
herpesvirus 7]
Length = 233
Score = 31.7 bits (70), Expect = 5.6
Identities = 21/86 (24%), Positives = 43/86 (49%), Gaps = 2/86 (2%)
Query: 72 YKRKYVEDEKSEVISKLRIIIEYLENDNKDKFCED--RKIKKKRIEDVLKLSFQLIKIKE 245
+++++ E +K + K + + + + ++ K ED +K +KKR++D K Q + E
Sbjct: 145 FEKEHAERKKQDDDYKKKALKQKDKRRSEQKILEDCDKKDEKKRMDDTEKRKLQEDRRNE 204
Query: 246 SIDLRKTSEVKRINNEEDEINTHKNTIE 329
DL+K + ED+ K +E
Sbjct: 205 KQDLKKRVDDTEKRKLEDDRRNEKQDLE 232
>gi|3845099 (AE001373) predicted secreted protein [Plasmodium falciparum]
Length = 1192
Score = 31.7 bits (70), Expect = 5.6
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 69 DYKRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKES 248
D K KY ED+K + + E + DNK+K ED K K K ED + + K K+
Sbjct: 661 DDKEKYKEDDKEDDKEDDK---EKDKEDNKEKDKEDNKEKDK--EDDKEKDKEDDKEKDK 715
Query: 249 IDLR-KTSEVKRINNEEDEINTH-------KNTIEIDDTKEETKT 359
D + K E + ++ED+ H K ++ DD E KT
Sbjct: 716 EDNKEKDKEDNKEKDKEDDKEKHDKHVRRIKKKMKDDDYDESLKT 760
>gi|4156029 (AE001563) TYPE III RESTRICTION ENZYME [Helicobacter pylori J99]
Length = 969
Score = 31.7 bits (70), Expect = 5.6
Identities = 29/98 (29%), Positives = 56/98 (56%), Gaps = 6/98 (6%)
Query: 81 KYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK---KRIEDV-LKLSFQLIKIKES 248
+++ ++V + + + LEN +++KF E +K ++ KR+E++ L++ +Q IK K S
Sbjct: 741 EFISALSNKVKLSFKSVAKVLENIDENKFNEIKKNEQEGLKRLEELFLEIIYQNIKDKIS 800
Query: 249 IDLRKTSEVKRINNEEDEINTHKNTIE--IDDTKEETKTNIKTS 374
+R+T+ +K N + D K I +D + K IK S
Sbjct: 801 YQMRETT-IK--NRKNDAFYDEKGEIREFLDGSLGADKYEIKNS 841
>gi|477226|pir||A48426 heat shock protein HSP82 - maize >gi|300083|bbs|130886 (S59780)
HSP82=82 kda heat shock protein [Zea mays, seedling,
leaves, Peptide, 715 aa] [Zea mays]
Length = 715
Score = 31.7 bits (70), Expect = 5.6
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 81 KYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLR 260
K + D++ E +K + E D++DK +D+ KKK++++V Q+ K ++ I LR
Sbjct: 227 KEISDDEEEEDNKKEEEGDVEEVDDEDKDTKDKSKKKKKVKEVSHEWVQINK-QKPIWLR 285
Query: 261 KTSEVKR 281
K E+ R
Sbjct: 286 KPEEITR 292
>gi|729771|sp|Q08277|HS82_MAIZE HEAT SHOCK PROTEIN 82
Length = 715
Score = 31.7 bits (70), Expect = 5.6
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 81 KYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLR 260
K + D++ E +K + E D++DK +D+ KKK++++V Q+ K ++ I LR
Sbjct: 227 KEISDDEEEEDNKKEEEGDVEEVDDEDKDTKDKSKKKKKVKEVSHEWVQINK-QKPIWLR 285
Query: 261 KTSEVKR 281
K E+ R
Sbjct: 286 KPEEITR 292
>gi|1041785 (U36927) rhoptry protein [Plasmodium yoelii]
Length = 2401
Score = 31.7 bits (70), Expect = 5.6
Identities = 44/195 (22%), Positives = 82/195 (41%), Gaps = 12/195 (6%)
Query: 12 LKNTPNILFL--LCAVLDCXXDYKRKYVEDEK---SEVISKLRIIIEYLENDN------K 158
++N NIL L + ++D +Y + ++ K +E+ + +II + EN + K
Sbjct: 980 IENIYNILKLNKIKKIIDKVKEYTDEIEKNNKKINAELSNSEKIITQLKENSSLKECQSK 1039
Query: 159 DKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTIEIDD 338
K D + I+++ L ++ K +I+ + K ++ + N IE+ D
Sbjct: 1040 IKSTIDDNYVSECIKNITNLKTYIVNEKNNIN----TYFKNAEEYNQNVSLNFNNIEMAD 1095
Query: 339 TKEETKTNIKTSDLT-LXXXXXXXXXXXXXXXXTFKDIKYKIEDEEYLRKILFKIFSDNL 515
TK + NIK ++ T +KD K E K LF+ + +
Sbjct: 1096 TKSQYILNIKKNNGTNNTDYNIKELKEHKKKSNVYKDEAGKNTQEIKKNKELFEKYEQEV 1155
Query: 516 AVKIGSEYFYKNKKITFSNDFITTEKY 596
V + Y + N F T+ Y
Sbjct: 1156 TVLLNKYY-----AVELKNKFDKTKNY 1177
>gi|2982196|gb|AAC06348| (AF007865) bacitracin synthetase 3; BacC [Bacillus licheniformis]
Length = 6359
Score = 31.7 bits (70), Expect = 5.6
Identities = 23/84 (27%), Positives = 42/84 (49%), Gaps = 2/84 (2%)
Query: 111 ISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINN 290
ISK + + +E D+K +F + K + E V +++ +++ E I R KR++
Sbjct: 1413 ISKFDLTLSAIEKDSKIEFDLEYCTKLFKRETVERMAAHFVRVLEDISKRTD---KRLDQ 1469
Query: 291 EEDEINTHKNTI--EIDDTKEETKTN 362
E KNT+ +DTK + T+
Sbjct: 1470 IEAMSEDEKNTLLYRFNDTKTDAPTD 1495
>gi|2496111|sp|Q58135|Y725_METJA HYPOTHETICAL PROTEIN MJ0725 >gi|2127830|pir||E64390 coenzyme F420
hydrogenase beta chain - Methanococcus jannaschii
>gi|1591441 (U67519) coenzyme F420-reducing hydrogenase,
beta subunit [Methanococcus jannaschii]
Length = 261
Score = 31.7 bits (70), Expect = 5.6
Identities = 12/42 (28%), Positives = 29/42 (68%), Gaps = 2/42 (4%)
Query: 183 IKKKRIEDVLKLSFQ--LIKIKESIDLRKTSEVKRINNEEDEIN 308
++ K +ED++ + LI++KE++D++ +++ I + +EIN
Sbjct: 205 VRNKMVEDIINEMAEKGLIEVKETVDIKAIEKLENIKKKNEEIN 248
>gi|1346789|sp|P03864|PRE3_STAAU PLASMID RECOMBINATION ENZYME (MOBILIZATION PROTEIN) >gi|151683
(J01764) Pre protein (plasmid recombination) [Plasmid
pT181]
Length = 413
Score = 31.7 bits (70), Expect = 5.6
Identities = 29/87 (33%), Positives = 48/87 (54%), Gaps = 11/87 (12%)
Query: 48 AVLDCXXDYKR----KYVEDEKSEVISK---LRIIIEYLEN--DNKDKFCEDRKIKKKRI 200
A D DY+ + ++D+ E+ K L +E +EN DN ++ E+ K K+ I
Sbjct: 280 AAQDISEDYEYIKSGRALDDKDKEIREKDDLLNKAVERIENADDNFNQLYENAKPLKENI 339
Query: 201 EDVLKLSFQLIKIKESIDLRKT--SEVKRINNEEDEIN 308
E LKL L+K E + R T V ++ +E ++N
Sbjct: 340 EIALKLLKILLKELERVLGRNTFAERVNKLTEDEPKLN 377
>gi|1052999 (U38428) recombination protein [Staphylococcus aureus]
Length = 413
Score = 31.7 bits (70), Expect = 5.6
Identities = 29/87 (33%), Positives = 48/87 (54%), Gaps = 11/87 (12%)
Query: 48 AVLDCXXDYKR----KYVEDEKSEVISK---LRIIIEYLEN--DNKDKFCEDRKIKKKRI 200
A D DY+ + ++D+ E+ K L +E +EN DN ++ E+ K K+ I
Sbjct: 280 AAQDISEDYEYIKSGRALDDKDKEIREKDDLLNKAVERIENADDNFNQLYENAKPLKENI 339
Query: 201 EDVLKLSFQLIKIKESIDLRKT--SEVKRINNEEDEIN 308
E LKL L+K E + R T V ++ +E ++N
Sbjct: 340 EIALKLLKILLKELERVLGRNTFAERVNKLTEDEPKLN 377
>gi|2979546 (AC003680) unknown protein [Arabidopsis thaliana]
Length = 205
Score = 31.7 bits (70), Expect = 5.6
Identities = 24/94 (25%), Positives = 37/94 (38%)
Query: 96 EKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEV 275
EK E + K +++ E+D D E +K K+KR + DLR +E+
Sbjct: 59 EKKEKLKKAEVVVPATESDGDDSVVEKKKKKRKR--------------NQMTDLRFENEL 104
Query: 276 KRINNEEDEINTHKNTIEIDDTKEETKTNIKTSD 377
I+ K E K++ K KT D
Sbjct: 105 AEIDGRSKRKERKKKYWE---AKKQKKNKGKTED 135
>gi|4176527|emb|CAA22883| (AL035263) hypothetical protein [Schizosaccharomyces pombe]
Length = 675
Score = 31.3 bits (69), Expect = 7.3
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 210 LKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTIEIDDTKEETKTNIK 368
L + QL+K+K SID K K+ N+ + +N+++ E + EE NI+
Sbjct: 90 LSVQSQLLKVKNSIDSYKNEWSKKTNDAQILLNSYETFCEEEALIEEKLKNIE 142
>gi|3913894|sp|O67825|IF2_AQUAE TRANSLATION INITIATION FACTOR IF-2 >gi|2984268 (AE000769)
initiation factor IF-2 [Aquifex aeolicus]
Length = 805
Score = 31.3 bits (69), Expect = 7.3
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 93 DEKSEVISKLRIIIEYLENDNK-----DKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDL 257
+EK E K +I+E + + K ++ E ++ ++K+ E+ K S + + IKE ++
Sbjct: 80 EEKKEEEKKEEVIVEEVVEEKKPEVIVEEIEEKKEEEEKKEEEKPKKSVEEL-IKEILEK 138
Query: 258 R-KTSEVKRINNEEDEINTHKNTIEIDDTKEETKTNIKTSD 377
+ K E K++ E E ++ ++ KEE K K +
Sbjct: 139 KEKEKEKKKVEKERKEEKVRVVEVKKEERKEEKKEEKKEEE 179
>gi|1771158|emb|CAA69181| (Y07861) MFP1 protein [Lycopersicon esculentum]
Length = 697
Score = 31.3 bits (69), Expect = 7.3
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Query: 87 VEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKT 266
+++EK ++ L+ I+ L+ND + K KK++++ LK LI++ E T
Sbjct: 203 LQNEK-KLAEDLKFEIKGLQND-----LMNTKEDKKKLQEELKEKLDLIQVLEEKITLLT 256
Query: 267 SEVKRINNEEDEINTHKNTIEIDDTKEETKTNIKTSDLTLXXXXXXXXXXXXXXXXTFKD 446
+E+K + E++ NT ++ + + E +L K+
Sbjct: 257 TEIK-----DKEVSLRSNTSKLAEKESEVN--------SLSDMYQQSQDQLMNLTSEIKE 303
Query: 447 IKYKIEDEEYLRKILFKIFS-DNLAVKIGS 533
+K +I+ E R++ K S DNL V++ S
Sbjct: 304 LKDEIQKRE--RELELKCVSEDNLNVQLNS 331
>gi|3257342|dbj|BAA30025| (AP000004) 879aa long hypothetical purine NTPase [Pyrococcus
horikoshii]
Length = 879
Score = 31.3 bits (69), Expect = 7.3
Identities = 26/91 (28%), Positives = 59/91 (64%), Gaps = 35/91 (38%)
Query: 78 RKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKK---------RIEDVLKLSFQL 230
R+ E+ K++++ K + + +E + ++ +R+++ + R+ + ++ Q+
Sbjct: 446 RELTEEHKADLLRKYSLELSSIEKEIQEAKALERQLRAEFRKVENELSRLSSLKTIADQI 505
Query: 231 IKIKESI------DLRKTSE---------------VKRINNEEDEINTHKN-----TIEI 332
I+I+E + DL++ E V+ + E +E+N +KN IEI
Sbjct: 506 IEIRERLSKINLEDLKRDKEEYELLKSESNKLKGEVESLKKEVNELNDYKNESTKLEIEI 565
Query: 333 DDTKEE 350
D K+E
Sbjct: 566 DKAKKE 571
>gi|133615|sp|P28976|RRPL_TSWV1 RNA-DIRECTED RNA POLYMERASE (L PROTEIN) >gi|67085|pir||RRVUTW
RNA-directed RNA polymerase (EC 2.7.7.48) - tomato
spotted wilt virus (strain BR-01)
>gi|222681|dbj|BAA00955| (D10066) RNA polymerase [tomato
spotted wilt virus]
Length = 2875
Score = 31.3 bits (69), Expect = 7.3
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 168 CEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTIEIDDTKE 347
C+ K++K+ +ED + ++ IK++ +T + K N + + +KN + DT
Sbjct: 536 CDTTKMEKQELEDEIDINTGSIKVE------RTKKSKEWNKQGSCLTRNKNEFCMKDTGR 589
Query: 348 ETKT 359
E KT
Sbjct: 590 ENKT 593
>gi|1289512 (U53861) slow myosin heavy chain 3 [Coturnix coturnix] >gi|1289514
(U53862) slow myosin heavy chain 3 [Coturnix coturnix]
Length = 1931
Score = 31.3 bits (69), Expect = 7.3
Identities = 20/72 (27%), Positives = 36/72 (49%)
Query: 156 KDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTIEID 335
K K +++ K ++DV QLIK K +++ K + ED++N H+N +E
Sbjct: 1209 KQKLEKEKSELKLELDDVSSNMEQLIKAKANLE-------KMCRSTEDQMNEHRNKLE-- 1259
Query: 336 DTKEETKTNIKT 371
+ T T++ T
Sbjct: 1260 -ESQRTVTDLST 1270
>gi|3874633|emb|CAA92287| (Z68159) C33D9.6 [Caenorhabditis elegans]
Length = 790
Score = 30.9 bits (68), Expect = 9.6
Identities = 15/61 (24%), Positives = 33/61 (53%)
Query: 147 NDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTI 326
ND + E+ K+K K++E+ + + +K+KE+ L+ T ++ + + E + N +
Sbjct: 578 NDQIEMIFENNKLKTKKLEENYRNAKDQLKLKEAHHLKLTQRIEDLEKKLAEKDERLNYL 637
Query: 327 E 329
E
Sbjct: 638 E 638
>gi|127774|sp|P08799|MYS2_DICDI MYOSIN II HEAVY CHAIN, NON MUSCLE >gi|84128|pir||A26655 myosin heavy
chain - slime mold (Dictyostelium discoideum) >gi|167835
(M14628) myosin heavy chain [Dictyostelium discoideum]
Length = 2116
Score = 30.9 bits (68), Expect = 9.6
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Query: 78 RKYVEDEKSEVISKL---RIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKES 248
RK V E E+ ++L R + E K E ++K++ +ED + +L+K K +
Sbjct: 1645 RKQVWQEVDELRAQLDSERAALNASEKKIKSLVAEVDEVKEQ-LEDEILAKDKLVKAKRA 1703
Query: 249 IDLRKTSEVKRINNEED-----EINTHKNTIEIDDTKEETKTNIKTSDLTLXXXXXXXXX 413
+++ ++ EED E + + T E++D K++ ++ + L
Sbjct: 1704 LEVELEEVRDQLEEEEDSRSELEDSKRRLTTEVEDIKKKYDAEVE-QNTKLDEAKKKLTD 1762
Query: 414 XXXXXXXTFKDIKYKIEDEEYLRKILFKIFSDNLA 518
+D K K+ + E +K L D LA
Sbjct: 1763 DVDTLKKQLEDEKKKLNESERAKKRLESENEDFLA 1797
>gi|3649767|emb|CAB11116| (Z98547) predicted using hexExon; MAL3P3.15 (PFC0405c),
Hypothetical protein, len: 609 aa [Plasmodium
falciparum]
Length = 608
Score = 30.9 bits (68), Expect = 9.6
Identities = 28/98 (28%), Positives = 48/98 (48%)
Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESID 254
KRK E EK ++I+KL I+ +E + + + + +KKK+I + K+ KIK I
Sbjct: 144 KRKEFE-EKKKLINKLTNILN-VEKEKGNYYFLPKCLKKKKISKLKKIIILEKKIKNDIY 201
Query: 255 LRKTSEVKRINNEEDEINTHKNTIEIDDTKEETKTNIK 368
+ + IN+ IN H I + + + K +K
Sbjct: 202 QELLKQKENINS----INDHHTGIYLQLIQNKRKWILK 235
>gi|2501586|sp|Q94480|V136_DICDI VEG136 PROTEIN >gi|1513300 (U66527) ORFveg136; similar to
Saccharomyces cerevisiae chromosome VII reading frame
ORF YGL211w encoded by EMBL Accession Number Z72733
[Dictyostelium discoideum]
Length = 357
Score = 30.9 bits (68), Expect = 9.6
Identities = 19/58 (32%), Positives = 32/58 (54%), Gaps = 1/58 (1%)
Query: 204 DVLK-LSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTIEIDDTKEETKTNIKTSD 377
D+LK L+ L K+K SI+L++ + NN N + NT++++ T T T S+
Sbjct: 303 DLLKNLNSGLAKVKLSINLKRGKD----NNNNSNNNDNNNTLKLESTSAATTTTTTVSN 357
>gi|3041708|sp|P13540|MYSB_MESAU MYOSIN HEAVY CHAIN, CARDIAC MUSCLE BETA ISOFORM
>gi|2119308|pir||I48153 beta-myosin heavy chain - golden
hamster >gi|402372 (L12104) beta-myosin heavy chain
[Mesocricetus auratus] >gi|1581130|prf||2116354A beta
myosin:SUBUNIT=heavy chain [Mesocricetus auratus]
Length = 1934
Score = 30.9 bits (68), Expect = 9.6
Identities = 21/98 (21%), Positives = 53/98 (53%), Gaps = 3/98 (3%)
Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQLIKIKES 248
K++ +EDE SE+ + + L KDK + K+K + + + ++ +L K K++
Sbjct: 938 KKRKLEDECSELKRDIDDLELTLAKVEKDKHATENKVKNLTEEMAGLDEIIAKLTKEKKA 997
Query: 249 IDLRKTSEVKRINNEEDEINT-HKNTIEIDDTKEETKTNIK 368
+ + + EED++NT K+ ++++ ++ + +++
Sbjct: 998 LQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDDLEGSLE 1038
>gi|2314701|gb|AAD08561| (AE000650) type III restriction enzyme R protein (res) [Helicobacter
pylori 26695]
Length = 967
Score = 30.9 bits (68), Expect = 9.6
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 6/100 (6%)
Query: 81 KYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK---KRIEDV-LKLSFQLIKIKES 248
+++ ++V + + + LEN +++KF E +K ++ +R+E++ L++ +Q IK K S
Sbjct: 739 EFISALSNKVKLSFKSVAKVLENIDENKFNEIKKNEQEGLRRLEELFLEIIYQNIKDKIS 798
Query: 249 IDLRKTSEVKRINNEEDEINTHKNTIE--IDDTKEETKTNIKTSDL 380
+R+T+ +K N + D K I +D + K IK S +
Sbjct: 799 YQMRETT-IK--NRKNDAFYDEKGEIREFLDGSLGADKYEIKNSSV 841
>gi|2501243|sp|Q00313|TOP1_CANAL DNA TOPOISOMERASE I >gi|1465731 (U40454) topoisomerase type I
[Candida albicans]
Length = 778
Score = 30.9 bits (68), Expect = 9.6
Identities = 20/75 (26%), Positives = 37/75 (48%), Gaps = 3/75 (4%)
Query: 144 ENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVK---RINNEEDEINTH 314
E+D D +K +KKR+E + + +K+ + R +VK ++ E N
Sbjct: 28 EDDEDDDIPLAKKSRKKRVESDYEEDEDEVPLKKLSNGRAKKQVKTETKVKKEPKSANKS 87
Query: 315 KNTIEIDDTKEETKTNIK 368
K+T + D ++ KT +K
Sbjct: 88 KSTSKKDTKVKKEKTTVK 105
>gi|482393|pir||A45669 neurofilament triplet M protein - rat >gi|205688 (M18628) NF-M
protein [Rattus norvegicus]
Length = 845
Score = 30.9 bits (68), Expect = 9.6
Identities = 23/72 (31%), Positives = 35/72 (47%)
Query: 87 VEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKT 266
VEDEKSE+ L +I E L K+ E + ++K E +K + + KE + K
Sbjct: 462 VEDEKSEMEDALTVIAEELAASAKE---EKEEAEEKEEEPEVKSPVKSPEAKEEEEGEKE 518
Query: 267 SEVKRINNEEDE 302
E + EE+E
Sbjct: 519 EEEEGQEEEEEE 530
>gi|476355|pir||A46762 myosin alpha heavy chain, cardiac muscle - human
>gi|219524|dbj|BAA00791| (D00943) cardiac alpha-myosin
heavy chain [Homo sapiens]
Length = 1939
Score = 30.9 bits (68), Expect = 9.6
Identities = 31/150 (20%), Positives = 72/150 (47%), Gaps = 7/150 (4%)
Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQLIKIKES 248
K++ +EDE SE+ + + L K+K + K+K + + + ++ +L K K++
Sbjct: 941 KKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKA 1000
Query: 249 IDLRKTSEVKRINNEEDEINT-HKNTIEIDDTKEETKTNI---KTSDLTLXXXXXXXXXX 416
+ + + EED++NT K+ ++++ ++ + ++ K + L
Sbjct: 1001 LQEAHQQALDDLQAEEDKVNTLSKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGD 1060
Query: 417 XXXXXXTFKDIKY-KIEDEEYLRKILFKIFSDNLAVK 524
+ D++ K++ EE L+K F I N ++
Sbjct: 1061 LKLTQESIMDLENDKLQLEEKLKKKEFDINQQNSKIE 1097
>gi|3915779|sp|P13539|MYSA_MESAU MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHA ISOFORM
>gi|2119307|pir||I48175 alpha-cardiac myosin heavy chain
gene - golden hamster >gi|402374 (L15351) alpha-cardiac
myosin heavy chain gene [Mesocricetus auratus]
Length = 1939
Score = 30.9 bits (68), Expect = 9.6
Identities = 31/150 (20%), Positives = 72/150 (47%), Gaps = 7/150 (4%)
Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQLIKIKES 248
K++ +EDE SE+ + + L K+K + K+K + + + ++ +L K K++
Sbjct: 941 KKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKA 1000
Query: 249 IDLRKTSEVKRINNEEDEINT-HKNTIEIDDTKEETKTNI---KTSDLTLXXXXXXXXXX 416
+ + + EED++NT K+ ++++ ++ + ++ K + L
Sbjct: 1001 LQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGD 1060
Query: 417 XXXXXXTFKDIKY-KIEDEEYLRKILFKIFSDNLAVK 524
+ D++ K++ EE L+K F I N ++
Sbjct: 1061 LNVTQESIMDLENDKLQLEEKLKKKEFDISQQNSKIE 1097
>gi|4493946|emb|CAB38982| (AL034556) predicted using hexExon; MAL3P5.20 (PFC0680w),
Hypothetical protein, len: 427 aa [Plasmodium
falciparum]
Length = 426
Score = 30.9 bits (68), Expect = 9.6
Identities = 21/78 (26%), Positives = 40/78 (50%), Gaps = 1/78 (1%)
Query: 144 ENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNE-EDEINTHKN 320
EN K + E++K+ K+ E+ + +D +K E K + + ED++ K
Sbjct: 195 ENKMKSQKEEEKKMDSKKEEE------------KKMDSKKKEEKKMDSKKKEDKMGNQKK 242
Query: 321 TIEIDDTKEETKTNIKTSD 377
+I++ K+E KTN +T +
Sbjct: 243 ECKINNQKKERKTNNQTKE 261
>gi|127741|sp|P02563|MYSA_RAT MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHA ISOFORM
>gi|92498|pir||S06005 myosin alpha heavy chain, cardiac
muscle - rat >gi|56655|emb|CAA34064| (X15938) alpha
cardiac myosin heavy chain (AA 1-1938) [Rattus
norvegicus]
Length = 1938
Score = 30.9 bits (68), Expect = 9.6
Identities = 31/150 (20%), Positives = 72/150 (47%), Gaps = 7/150 (4%)
Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQLIKIKES 248
K++ +EDE SE+ + + L K+K + K+K + + + ++ +L K K++
Sbjct: 940 KKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKA 999
Query: 249 IDLRKTSEVKRINNEEDEINT-HKNTIEIDDTKEETKTNI---KTSDLTLXXXXXXXXXX 416
+ + + EED++NT K+ ++++ ++ + ++ K + L
Sbjct: 1000 LQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGD 1059
Query: 417 XXXXXXTFKDIKY-KIEDEEYLRKILFKIFSDNLAVK 524
+ D++ K++ EE L+K F I N ++
Sbjct: 1060 LKLTQESIMDLENDKLQLEEKLKKKEFDISQQNSKIE 1096
>gi|3880432|emb|CAA91398| (Z66521) similar to kinensin-like protein; cDNA EST yk198e10.3
comes from this gene; cDNA EST yk198e10.5 comes from
this gene [Caenorhabditis elegans]
Length = 605
Score = 30.9 bits (68), Expect = 9.6
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 45 CAVLDCXXDYKRKYVEDEKSEVISKLRIIIEYLENDNKDKFCE-DRKIKKKRIEDVLKLS 221
CA + D K K + +E +++ KLR LE+DNK+K E DR I++ R KL
Sbjct: 195 CADVSRVEDQKVKTLRNELADLKLKLR----QLEDDNKEKDMENDRLIQENRTLKREKL- 249
Query: 222 FQLIKIKESIDLRKTSEVKRINNEEDEINTH-KNTIEIDDTKEETKTN 362
+LI ++ K + ++ +N+E ++ + I + D + + +N
Sbjct: 250 -KLINCFKTQMAEKDAIIRELNDEVVDLRGQIRVAIRVRDFERDGSSN 296
>gi|191618 (M76598) alpha cardiac myosin heavy chain [Mus musculus]
Length = 1938
Score = 30.9 bits (68), Expect = 9.6
Identities = 31/150 (20%), Positives = 72/150 (47%), Gaps = 7/150 (4%)
Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQLIKIKES 248
K++ +EDE SE+ + + L K+K + K+K + + + ++ +L K K++
Sbjct: 941 KKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKA 1000
Query: 249 IDLRKTSEVKRINNEEDEINT-HKNTIEIDDTKEETKTNI---KTSDLTLXXXXXXXXXX 416
+ + + EED++NT K+ ++++ ++ + ++ K + L
Sbjct: 1001 LQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGD 1060
Query: 417 XXXXXXTFKDIKY-KIEDEEYLRKILFKIFSDNLAVK 524
+ D++ K++ EE L+K F I N ++
Sbjct: 1061 LKLTQESIMDLENDKLQLEEKLKKKEFDISQQNSKIE 1097
>gi|3024204|sp|Q02566|MYSA_MOUSE MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHA ISOFORM
>gi|2119306|pir||I49464 alpha cardiac myosin heavy chain
- mouse >gi|191620 (M76599) alpha cardiac myosin heavy
chain [Mus musculus] >gi|191624 (M76601) alpha cardiac
myosin heavy chain [Mus musculus]
Length = 1938
Score = 30.9 bits (68), Expect = 9.6
Identities = 31/150 (20%), Positives = 72/150 (47%), Gaps = 7/150 (4%)
Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQLIKIKES 248
K++ +EDE SE+ + + L K+K + K+K + + + ++ +L K K++
Sbjct: 941 KKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKA 1000
Query: 249 IDLRKTSEVKRINNEEDEINT-HKNTIEIDDTKEETKTNI---KTSDLTLXXXXXXXXXX 416
+ + + EED++NT K+ ++++ ++ + ++ K + L
Sbjct: 1001 LQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGD 1060
Query: 417 XXXXXXTFKDIKY-KIEDEEYLRKILFKIFSDNLAVK 524
+ D++ K++ EE L+K F I N ++
Sbjct: 1061 LKLTQESIMDLENDKLQLEEKLKKKEFDISQQNSKIE 1097
>gi|416720|sp|P32985|BPS2_DESAM BPS2 PROTEIN >gi|99246|pir||S22195 bps2 protein - Desulfurolobus
ambivalens >gi|40782|emb|CAA45528| (X64202) bps2
[Acidianus ambivalens]
Length = 582
Score = 30.9 bits (68), Expect = 9.6
Identities = 26/82 (31%), Positives = 52/82 (62%), Gaps = 9/82 (10%)
Query: 90 EDEKSEVISKLRIIIEYLENDNKDKFCEDR-KIKKKRIEDVLKLSFQL---IKIKESI-- 251
E E +V++K I + N+NK + +++ ++KK+ +ED+ +L IK KES+
Sbjct: 181 EKESDKVLNKTTQTIS-ITNENKLRDIKEKIEVKKRELEDLQNRIARLDQEIKNKESLAS 239
Query: 252 -DLRKTSE--VKRINNEEDEINTHKNTIEID 335
++R++ E ++ IN + +I +N EI+
Sbjct: 240 PEIRQSYERQLQEINAQLQKITAQRNEAEIE 270
>gi|542637|pir||S39599 class I histocompatibility antigen - African clawed frog
Length = 328
Score = 30.9 bits (68), Expect = 9.6
Identities = 23/82 (28%), Positives = 38/82 (46%)
Query: 78 RKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDL 257
++Y+E+E I L++ + + ND + K KI E +KL +
Sbjct: 173 KEYIENE---CIEHLKLYLPIISNDLEKKVIPKLKISSSESESGVKLHCWVYGFYP---- 225
Query: 258 RKTSEVKRINNEEDEINTHKNT 323
+ EVK I NE DEI++ + T
Sbjct: 226 -RDVEVKWIKNERDEIDSEEAT 246
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Apr 17, 1999 5:33 AM
Number of letters in database: 113,023,754
Number of sequences in database: 369,800
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79596621
Number of Sequences: 369800
Number of extensions: 1224041
Number of successful extensions: 5938
Number of sequences better than 10.0: 134
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 5865
Number of HSP's gapped (non-prelim): 110
length of query: 239
length of database: 113,023,754
effective HSP length: 53
effective length of query: 185
effective length of database: 93424354
effective search space: 17283505490
effective search space used: 17283505490
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 68 (30.9 bits)