BLASTX 2.0.8 [Jan-05-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 14-28F
(708 letters)
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
369,800 sequences; 113,023,754 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|3757523 (AC005167) putative transportin [Arabidopsis thaliana] 32 4.2
gi|119356|sp|P08734|ENO_XENLA ENOLASE (2-PHOSPHOGLYCERATE DEHYDR... 31 9.4
>gi|3757523 (AC005167) putative transportin [Arabidopsis thaliana]
Length = 827
Score = 32.1 bits (71), Expect = 4.2
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 184 IICLIYFISIQA----SNISSCREETNIKDVLIE--IKEENRIEKQGNGIIGDLGYKANL 23
I+C + +S A S I S +++N++D+L+ I E + + ++GDL ANL
Sbjct: 641 IVCSLDLLSGLAEGLGSGIESLVQQSNLRDLLLNCCIDEAADVRQSAFALMGDLARSANL 700
Query: 22 NANN 11
N N
Sbjct: 701 NREN 704
>gi|119356|sp|P08734|ENO_XENLA ENOLASE (2-PHOSPHOGLYCERATE DEHYDRATASE) (2-PHOSPHO-D-GLYCERATE
HYDRO-LYASE) >gi|68307|pir||NOXL phosphopyruvate
hydratase (EC 4.2.1.11) ENO1 - African clawed frog
>gi|64680|emb|CAA68706| (Y00718) enolase (AA 1-434)
[Xenopus laevis]
Length = 434
Score = 30.9 bits (68), Expect = 9.4
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 508 FNKIHVLSNLKTLFKKKDLHRKSKYINTKFYYTMCTQNDTSNIVISNRLRKCVISME 678
+ + + N KT + K + R KY+N +CTQN N+V ++ K +I M+
Sbjct: 44 YEALELRDNDKTRYLGKGVGRAVKYVNEFLGPALCTQN--LNVVEQEKIDKLMIEMD 98
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Apr 17, 1999 5:33 AM
Number of letters in database: 113,023,754
Number of sequences in database: 369,800
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97836419
Number of Sequences: 369800
Number of extensions: 1548715
Number of successful extensions: 3475
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3475
Number of HSP's gapped (non-prelim): 2
length of query: 236
length of database: 113,023,754
effective HSP length: 53
effective length of query: 182
effective length of database: 93424354
effective search space: 17003232428
effective search space used: 17003232428
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 68 (30.9 bits)