BLASTX 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 13VII17R
         (626 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           368,476 sequences; 112,640,273 total letters

Searching...................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|549664|sp|P36099|YKD0_YEAST HYPOTHETICAL 23.0 KD PROTEIN IN I...    31  6.1


>gi|549664|sp|P36099|YKD0_YEAST HYPOTHETICAL 23.0 KD PROTEIN IN IXR1-TFA1 INTERGENIC REGION
           >gi|539152|pir||S37847 hypothetical protein YKL030w -
           yeast (Saccharomyces cerevisiae)
           >gi|486029|emb|CAA81864| (Z28029) ORF YKL030w
           [Saccharomyces cerevisiae]
           Length = 201
           
 Score = 31.3 bits (69), Expect = 6.1
 Identities = 20/69 (28%), Positives = 38/69 (54%), Gaps = 11/69 (15%)

Query: 321 LFRIYIQCCSYLRYCNILTLYIIVLFFFLFNIYHYIYQ*SNT**YSFEVKLK*PLVK--- 491
           +F  Y  CC    YC I    +++L+++ +  Y+Y Y  S+     F +K+K  +V+   
Sbjct: 1   MFLCYCCCCYCFYYCII----VLLLYYYYYYYYYYYYGMSS---IIFFLKIKKKIVQIYI 53

Query: 492 --------YFFQCKDLLLII 527
                   +FF+C+  L  +
Sbjct: 54  FIYYSIWFFFFKCRRWLCFV 73


  Database: Non-redundant GenBank CDS
  translations+PDB+SwissProt+SPupdate+PIR
    Posted date:  Apr 12, 1999 12:54 PM
  Number of letters in database: 112,640,273
  Number of sequences in database:  368,476
  
Lambda     K      H
   0.318    0.135     0.00 

Gapped
Lambda     K      H
   0.270   0.0470 4.94e-324 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90124967
Number of Sequences: 368476
Number of extensions: 1400423
Number of successful extensions: 2780
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2778
Number of HSP's gapped (non-prelim): 2
length of query: 208
length of database: 112640273
effective HSP length: 53
effective length of query: 155
effective length of database: 93111045
effective search space: 14432211975
effective search space used: 14432211975
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 67 (30.5 bits)