BLASTX 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 12VII16R
         (728 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           369,800 sequences; 113,023,754 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|4049910 (AF063866) ORF MSV211 hypothetical protein [Melanoplu...    33  1.9


>gi|4049910 (AF063866) ORF MSV211 hypothetical protein [Melanoplus sanguinipes
           entomopoxvirus]
           Length = 81
           
 Score = 33.2 bits (74), Expect = 1.9
 Identities = 18/49 (36%), Positives = 26/49 (52%)

Query: 93  HITISNNYYAFIKN*L***NI*QIKINNLRILYNRYKYNIFKNFIFYVL 239
           +  I N  Y   KN     +I  I INN+ +L+N YK+ IFK+    V+
Sbjct: 23  YYNIGNEIYYLNKN-----DIKNININNIFLLFNNYKFRIFKSKYIIVI 66


  Database: Non-redundant GenBank CDS
  translations+PDB+SwissProt+SPupdate+PIR
    Posted date:  Apr 17, 1999  5:33 AM
  Number of letters in database: 113,023,754
  Number of sequences in database:  369,800
  
Lambda     K      H
   0.318    0.135     0.00 

Gapped
Lambda     K      H
   0.270   0.0470 4.94e-324 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77229486
Number of Sequences: 369800
Number of extensions: 974027
Number of successful extensions: 1769
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1768
Number of HSP's gapped (non-prelim): 2
length of query: 242
length of database: 113023754
effective HSP length: 53
effective length of query: 189
effective length of database: 93424354
effective search space: 17657202906
effective search space used: 17657202906
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 68 (30.9 bits)