BLASTX 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 12VII-9
         (613 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           369,800 sequences; 113,023,754 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|3881836|emb|CAB01454| (Z78019) Similarity to Yeast LPG22P pro...    56  2e-07
gi|2239229|emb|CAB10146| (Z97210) hypothetical protein [Schizosa...    56  2e-07
gi|2132182|pir||S61980 hypothetical protein YPL086c - yeast (Sac...    39  0.020
gi|4481958|emb|CAA21921| (AL033389) putative transcriptional reg...    34  1.2


>gi|3881836|emb|CAB01454| (Z78019) Similarity to Yeast LPG22P protein (TR:G1151240); cDNA EST
           EMBL:T00686 comes from this gene; cDNA EST EMBL:C12415
           comes from this gene; cDNA EST EMBL:C12728 comes from
           this gene; cDNA EST EMBL:C10626 comes from this ge...
           Length = 554
           
 Score = 56.2 bits (133), Expect = 2e-07
 Identities = 30/64 (46%), Positives = 44/64 (67%), Gaps = 3/64 (4%)

Query: 421 NEIVQRIVSLHNKNKKWDFNSIKSSVCKX--YSVMPRLVDIISAIPPEYSD-LVHLLRAK 591
           NEIV+ ++  HN+ K  + N +K  V +    S  P+LVDII+ +P +Y D L+  L+AK
Sbjct: 23  NEIVKLLIEAHNQKKDVNLNRLKCIVAQKNGLSFQPKLVDIIAGVPSDYKDSLLPKLKAK 82

Query: 592 PVRTSSG 612
           PVRT+SG
Sbjct: 83  PVRTASG 89



>gi|2239229|emb|CAB10146| (Z97210) hypothetical protein [Schizosaccharomyces pombe]
           Length = 544
           
 Score = 55.8 bits (132), Expect = 2e-07
 Identities = 32/66 (48%), Positives = 45/66 (67%), Gaps = 5/66 (7%)

Query: 415 AANEIVQRIVSLHNKNKKWDFNSIKSSVCKXY--SVMPRLVDIISAIPPE---YSDLVHL 579
           A  EIV  +++  N+NK  + N++K  + K +  S  PRL DII+AIPP+      L+  
Sbjct: 13  ACAEIVAELIASENQNKVINLNALKMRISKKHQLSESPRLTDIIAAIPPDAYLKESLMRK 72

Query: 580 LRAKPVRTSSG 612
           LRAKPVRT+SG
Sbjct: 73  LRAKPVRTASG 83



>gi|2132182|pir||S61980 hypothetical protein YPL086c - yeast (Saccharomyces cerevisiae)
           >gi|1151240 (U43281) Lpg22p [Saccharomyces cerevisiae]
           Length = 557
           
 Score = 39.5 bits (90), Expect = 0.020
 Identities = 22/47 (46%), Positives = 32/47 (67%), Gaps = 3/47 (6%)

Query: 472 DFNSIKSSVCKXYSV--MPRLVDIISAIPPEYSD-LVHLLRAKPVRTSSG 612
           + N + +   K Y +   PRL DII++IP +Y   L+  L+AKPVRT+SG
Sbjct: 46  NLNGLITKYSKKYKLKQQPRLTDIINSIPDQYKKYLLPKLKAKPVRTASG 95



>gi|4481958|emb|CAA21921| (AL033389) putative transcriptional regulator, zinc-finger,
           binuclear cluster domain containing [Schizosaccharomyces
           pombe]
           Length = 595
           
 Score = 33.6 bits (75), Expect = 1.2
 Identities = 23/79 (29%), Positives = 38/79 (47%)

Query: 243 HLSFFCYIVFKYFLCCLSAMKEFNDLENAISKKDIIEILSVYAKFLEGIVNDMXXVEVED 64
           +L  F Y  F  FL   S + E +DL+  I  KD+  + S++A FL+  + D+     E 
Sbjct: 502 YLWLFLYCPFTPFLTVFSHLLEDDDLDADICVKDVDRLYSIHAFFLK--MKDISGEFAER 559

Query: 63  INKLMENIQIKRNVYSAAE 7
           ++ + EN       Y A +
Sbjct: 560 LSVITENFIQSAEQYLALQ 578


  Database: Non-redundant GenBank CDS
  translations+PDB+SwissProt+SPupdate+PIR
    Posted date:  Apr 17, 1999  5:33 AM
  Number of letters in database: 113,023,754
  Number of sequences in database:  369,800
  
Lambda     K      H
   0.318    0.135     0.00 

Gapped
Lambda     K      H
   0.270   0.0470 4.94e-324 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90914658
Number of Sequences: 369800
Number of extensions: 1503759
Number of successful extensions: 3636
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3629
Number of HSP's gapped (non-prelim): 6
length of query: 204
length of database: 113023754
effective HSP length: 53
effective length of query: 150
effective length of database: 93424354
effective search space: 14013653100
effective search space used: 14013653100
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 67 (30.5 bits)