BLASTX 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 12VII-24F
         (498 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           368,476 sequences; 112,640,273 total letters

Searching...................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|113467|sp|P19568|ADTA_RICPR ADP,ATP CARRIER PROTEIN 1 (ADP/AT...    43  0.002
gi|4138583|emb|CAA71785| (Y10821) plastidic ATP/ADP-transporter ...    35  0.39
gi|3860936|emb|CAA14836| (AJ235271) ADP,ATP CARRIER PROTEIN (tlc...    32  2.6
gi|2879935|dbj|BAA24829| (AB010895) secretory, endostyle (zone6)...    31  7.7


>gi|113467|sp|P19568|ADTA_RICPR ADP,ATP CARRIER PROTEIN 1 (ADP/ATP TRANSLOCASE 1)
           >gi|79323|pir||JQ0026 ADP,ATP carrier protein -
           Rickettsia prowazekii >gi|152470 (M28816) ATP/ADP
           translocase [Rickettsia prowazekii] >gi|3834579
           (AF087957) ATP/ADP translocase [synthetic construct]
           >gi|3860623|emb|CAA14524| (AJ235270) ADP,ATP CARRIER
           PROTEIN (tlc1) [Rickettsia prowazekii]
           Length = 498
           
 Score = 42.6 bits (98), Expect = 0.002
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 2/103 (1%)

Query: 179 ERKKKNKSTFAQALKVMNTSKLALFICLMNFIFCVLLNLTEATYKSGMGNTINRKMVIKE 358
           E+K K K +F ++LK++ TSK   +I L+   + V +NL E  +KS     +      KE
Sbjct: 258 EKKTKAKLSFIESLKMIFTSKYVGYIALLIIAYGVSVNLVEGVWKS----KVKELYPTKE 313

Query: 359 IY--QMRRSSILQGTIGIVSLVLLLTPLARWVYTKNWFSIAIITP 487
            Y   M +    QG + I + +L+ + + R V   +W + A+ITP
Sbjct: 314 AYTIYMGQFQFYQGWVAI-AFMLIGSNILRKV---SWLTAAMITP 354



>gi|4138583|emb|CAA71785| (Y10821) plastidic ATP/ADP-transporter [Solanum tuberosum]
           Length = 631
           
 Score = 34.8 bits (78), Expect = 0.39
 Identities = 30/112 (26%), Positives = 54/112 (47%), Gaps = 3/112 (2%)

Query: 155 RDKSIEATERKKKNKS--TFAQALKVMNTSKLALFICLMNFIFCVLLNLTEATYKSGMGN 328
           R+ ++    +KKK K   T  ++LK + +SK    +  +   + + +NL E T+KS    
Sbjct: 334 RNVALPTRSKKKKVKPNMTTMESLKFLVSSKYIRDLATLVVAYGISINLVEVTWKS---- 389

Query: 329 TINRKMVIKEIYQMRRSSILQGTIGIVSLVLLLTPLARWVYTK-NWFSIAIITPT 490
            +  +      Y          T GI +  ++L  L++W++ K  W + A ITPT
Sbjct: 390 KLKAQFPSPNEYSSFMGDFSTAT-GIATFTMML--LSQWIFDKYGWGAAAKITPT 441



>gi|3860936|emb|CAA14836| (AJ235271) ADP,ATP CARRIER PROTEIN (tlc2) [Rickettsia prowazekii]
           Length = 507
           
 Score = 32.1 bits (71), Expect = 2.6
 Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 15/113 (13%)

Query: 149 KTRDKSIEATER--KKKNKSTFAQALKVMNTSKLAL------FICLMNFIFCVLLNLTEA 304
           K  DKS+   ++  K KN+ T    L ++ ++K+ L      FICL+   + + +NL E 
Sbjct: 252 KLIDKSVVEADKNIKFKNQRTDILKLSLLESAKIILTSRYLGFICLLVMSYSMSINLIEG 311

Query: 305 TYKSGMGNTINRKMVIKEIYQMRRSSI-LQGTI----GIVSLV--LLLTPLARWVYTKNW 463
            + S           +K++Y   +  I   G +    G+++LV   L + L R +Y   W
Sbjct: 312 LWMS----------KVKQLYPATKDFISYHGEVLFWTGVLTLVSAFLGSSLIR-IY--GW 358

Query: 464 FSIAIITP 487
           F  AIITP
Sbjct: 359 FWGAIITP 366



>gi|2879935|dbj|BAA24829| (AB010895) secretory, endostyle (zone6) [Ciona intestinalis]
           Length = 650
           
 Score = 30.5 bits (67), Expect = 7.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 490 SWCYYSY*KPIFGIYPSC 437
           SWC Y Y +P+  +YP C
Sbjct: 67  SWCSYKYYEPVLHVYPGC 84


  Database: Non-redundant GenBank CDS
  translations+PDB+SwissProt+SPupdate+PIR
    Posted date:  Apr 12, 1999 12:54 PM
  Number of letters in database: 112,640,273
  Number of sequences in database:  368,476
  
Lambda     K      H
   0.318    0.135     0.00 

Gapped
Lambda     K      H
   0.270   0.0470 4.94e-324 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77692572
Number of Sequences: 368476
Number of extensions: 1302064
Number of successful extensions: 3315
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3313
Number of HSP's gapped (non-prelim): 4
length of query: 166
length of database: 112640273
effective HSP length: 52
effective length of query: 113
effective length of database: 93479521
effective search space: 10563185873
effective search space used: 10563185873
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 66 (30.1 bits)