BLASTX 2.0.8 [Jan-05-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 12VII-23R
(778 letters)
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
368,476 sequences; 112,640,273 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|3845240 (AE001408) hypothetical protein [Plasmodium falciparum] 37 0.18
gi|4494006|emb|CAB39065| (AL034559) predicted using hexExon; MAL... 36 0.31
gi|2414618|emb|CAB16367| (Z99259) ribonuclease II RNB family pro... 35 0.54
gi|1168856|sp|P46468|CDAT_PLAFA PUTATIVE CELL DIVISION CYCLE ATP... 34 0.92
gi|267291|sp|Q02264|VE2_PCPV1 REGULATORY PROTEIN E2 >gi|319967|p... 34 0.92
gi|3758851|emb|CAB11136| (Z98551) predicted using hexExon; MAL3P... 34 0.92
gi|862488 (U24167) PAK1 [Saccharomyces cerevisiae] 34 1.6
gi|729899|sp|P40494|KIJ5_YEAST PROBABLE SERINE/THREONINE-PROTEIN... 34 1.6
gi|3420751 (AF079448) cytochrome c oxidase assembly protein [Dic... 34 1.6
gi|4493880|emb|CAB38989| (AL034558) predicted using hexExon; MAL... 34 1.6
gi|3845165 (AE001390) hypothetical protein [Plasmodium falciparum] 34 1.6
gi|3845254 (AE001412) hypothetical protein [Plasmodium falciparum] 34 1.6
gi|3132698 (AF061963) SAR DNA-binding protein-2 [Pisum sativum] 33 2.1
gi|3789903 (AF081798) diaminopimelate epimerase DafE [Dictyostel... 33 2.7
gi|3649755|emb|CAB11104| (Z98547) predicted using hexExon; MAL3P... 33 2.7
gi|3845262 (AE001414) BRAHMA ortholog (DNA helicase superfamily ... 33 2.7
gi|2642509 (AF030691) CG1 [Plasmodium falciparum] 32 4.7
gi|4049753 (AF063866) ORF MSV230 hypothetical protein [Melanoplu... 32 4.7
gi|3845107 (AE001375) hypothetical protein [Plasmodium falciparum] 32 4.7
gi|2642511 (AF030690) CG1 [Plasmodium falciparum] 32 4.7
gi|547925|sp|Q00749|MSME_STRMU MULTIPLE SUGAR-BINDING PROTEIN PR... 32 6.1
gi|3845099 (AE001373) predicted secreted protein [Plasmodium fal... 32 6.1
gi|3845297 (AE001421) hypothetical protein [Plasmodium falciparum] 32 6.1
gi|3024918|sp|Q58299|Y889_METJA HYPOTHETICAL PROTEIN MJ0889 >gi|... 31 8.0
gi|1685115 (U68754) putative transcription factor [Dictyostelium... 31 8.0
gi|4493978|emb|CAB39037| (AL034559) predicted using hexExon; MAL... 31 8.0
gi|1041785 (U36927) rhoptry protein [Plasmodium yoelii] 31 8.0
gi|3745885 (L33180) AcMNPV orf58 [Bombyx mori nuclear polyhedros... 31 8.0
gi|3845229 (AE001405) hypothetical protein [Plasmodium falciparum] 31 8.0
gi|1816500 (L06303) 8b2 protein [Plasmodium falciparum] 31 8.0
>gi|3845240 (AE001408) hypothetical protein [Plasmodium falciparum]
Length = 2500
Score = 36.7 bits (83), Expect = 0.18
Identities = 32/124 (25%), Positives = 55/124 (43%), Gaps = 2/124 (1%)
Query: 374 DEEDKRRKANIAEKK--EKTFIFPSALELMXXXXXXXXXXRLFKDSNKLNKFEKEVENPS 201
D++D ++ N EK + +FPS +++ + K +K + + +N
Sbjct: 2369 DKKDDKKNENTREKNNLDNKKLFPSNIKVKLEKEEKSDEMKDDKKDDKKDNKKDHKKNDK 2428
Query: 200 NIFLKFSENENKKTSLDKNKGEKINLLNNVNGDKKNQEKKRAQNSKTTSFPLFSDSKKLK 21
I K + +KK DK +K N NN +KKN+ K +N+K ++ K K
Sbjct: 2429 KIDKKIDKKIDKKN--DKKNDKKNNKKNNKKVEKKNEIKNDKKNNKK------NNKKVAK 2480
Query: 20 TPENKN 3
E KN
Sbjct: 2481 KNEIKN 2486
Score = 32.1 bits (71), Expect = 4.7
Identities = 27/114 (23%), Positives = 44/114 (37%), Gaps = 3/114 (2%)
Query: 368 EDKRRKANIAEKKEKTFIFPSALELMXXXXXXXXXXRLFK---DSNKLNKFEKEVENPSN 198
++ R K N+ KK FPS +++ R K ++ + N + + PSN
Sbjct: 2259 DNTREKNNLDNKKS----FPSNIKVKLEEEEKSDDKRDDKKNDNTREKNNLDNKKSFPSN 2314
Query: 197 IFLKFSENENKKTSLDKNKGEKINLLNNVNGDKKNQEKKRAQNSKTTSFPLFSDSKK 27
I +K E E D K + NN++ K + + K D KK
Sbjct: 2315 IKVKLEEEEKSDDKRDDKKNDNTREKNNLDNKKSFPSNIKVKREKEEKSDEMKDDKK 2371
>gi|4494006|emb|CAB39065| (AL034559) predicted using hexExon; MAL3P7.23 (PFC0970w),
Hypothetical protein, len: 1197 aa [Plasmodium
falciparum]
Length = 1196
Score = 36.0 bits (81), Expect = 0.31
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 9/70 (12%)
Query: 248 DSNKLNKF-------EKEVENPSNIFLKFSENENKKTSLDKNKGEKINLLNNVNGDKKNQ 90
D+NK N F +++ + ++ F K +EN K + KNK + IN L N+N K +
Sbjct: 714 DTNKCNPFLVKSFYKDEKYKKSNDDFTKLNENNKKDSKNMKNK-KNINNLQNMNKIKDMK 772
Query: 89 EK--KRAQNSKTTSFPLFS 39
+K K NS SFP +S
Sbjct: 773 KKLFKEHLNSLKLSFPEYS 791
Score = 31.7 bits (70), Expect = 6.1
Identities = 17/57 (29%), Positives = 28/57 (48%)
Query: 251 KDSNKLNKFEKEVENPSNIFLKFSENENKKTSLDKNKGEKINLLNNVNGDKKNQEKK 81
KD N + + + ++ F + +NE +L+KNK + NN N KKN + K
Sbjct: 965 KDIFSNNFYMNNIRHHADSF--YYQNELNSFNLNKNKENNVRFFNNENDKKKNNKSK 1019
>gi|2414618|emb|CAB16367| (Z99259) ribonuclease II RNB family protein [Schizosaccharomyces
pombe]
Length = 927
Score = 35.2 bits (79), Expect = 0.54
Identities = 28/117 (23%), Positives = 56/117 (46%), Gaps = 6/117 (5%)
Query: 371 EEDKRRKANIAEKK-EKTFIFPSALELMXXXXXXXXXXRLFKDSNKLNKFEKEVENPSNI 195
++ +KA++ E K EK + P A + K++K K+ E+ +++
Sbjct: 78 QDSNHKKASLTETKTEKAKVKPKAKKK--------------NSKEKISKSSKQDEHKTDV 123
Query: 194 FL----KFSENENKKTSLDKNKGEKI-NLLNNVNGDKKNQEKKRAQNSKTTSFPLFSDSK 30
K S+N + + D+N ++ N + V D N + + N+K + +PL+ DS
Sbjct: 124 HKESVSKLSKNLESRNNRDENSAKREKNNSHQVEADTNNATEMVSSNAKKSVYPLYYDSA 183
Query: 29 KLK 21
+K
Sbjct: 184 TVK 186
>gi|1168856|sp|P46468|CDAT_PLAFA PUTATIVE CELL DIVISION CYCLE ATPASE >gi|552189 (M96757) cell
division cycle ATPase [Plasmodium falciparum]
Length = 709
Score = 34.4 bits (77), Expect = 0.92
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 257 LFKDSNKLNKFEKEVENPSNIFLKFSENE-NKKTSLDKNKGEKINLLNNVNGDKK-NQEK 84
L + SNKL+ N N L+ +NE NK +S DK K N L+N D + EK
Sbjct: 416 LTESSNKLSYTNMFPLNRKNTLLQNDKNEMNKDSSYDK----KTNALDNYKNDSTIDMEK 471
Query: 83 KRAQNSKTTSFPLFSDSKKLKTPENKN 3
K+ N K ++F +D ++ K N
Sbjct: 472 KK--NKKKSNFFFSNDDEETKNKNKTN 496
>gi|267291|sp|Q02264|VE2_PCPV1 REGULATORY PROTEIN E2 >gi|319967|pir||W2WLC1 E2 protein - pygmy
chimpanzee papillomavirus (type 1)
>gi|61014|emb|CAA44658| (X62844) E2 [Pygmy chimpanzee
papillomavirus type 1]
Length = 377
Score = 34.4 bits (77), Expect = 0.92
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 221 KEVENPSNIFLKFSENENKKTSLDKNKGEKINLLNNVNGDKKNQEKKRAQNSKTTSFPLF 42
K + PS+ K N + D+ + N +NN N + NQ++ + +S T L
Sbjct: 241 KRLRGPSHCARKLQNTSNIVCATDRGTLDSENNINNNNYNNNNQQRNNSNSSGTPIVQLQ 300
Query: 41 SDSKKLK 21
DS LK
Sbjct: 301 GDSNNLK 307
>gi|3758851|emb|CAB11136| (Z98551) predicted using hexExon; MAL3P6.15 (PFC0780w), Hypothetical
protein, len: 2658 aa [Plasmodium falciparum]
Length = 2657
Score = 34.4 bits (77), Expect = 0.92
Identities = 25/79 (31%), Positives = 36/79 (44%)
Query: 257 LFKDSNKLNKFEKEVENPSNIFLKFSENENKKTSLDKNKGEKINLLNNVNGDKKNQEKKR 78
+F+ +N L F K NI K + N+ KK S D +N+ NN + N KKR
Sbjct: 2196 IFEQNNILRTFIKNENKNKNIKKKNNNNKKKKASNDN-----MNVFNNTSNVNHNDIKKR 2250
Query: 77 AQNSKTTSFPLFSDSKKLK 21
++ K + KKLK
Sbjct: 2251 KRDIKNLLY------KKLK 2263
>gi|862488 (U24167) PAK1 [Saccharomyces cerevisiae]
Length = 810
Score = 33.6 bits (75), Expect = 1.6
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 182 SENENKKTSLDKNKGEKINLLNNVNGDKKNQEKKRAQNSKTTSFPLFSDSKKLKTPENKN 3
S N ++ S D N NVNG+ N + R +S T+SFP F+ K K +KN
Sbjct: 556 SVNNSRSASFDNN---------NVNGNGNNTNR-RLVSSSTSSFPKFNSDTKRKEESDKN 605
>gi|729899|sp|P40494|KIJ5_YEAST PROBABLE SERINE/THREONINE-PROTEIN KINASE YIL095W
>gi|1077780|pir||S50889 PRK1 protein - yeast
(Saccharomyces cerevisiae)
Length = 810
Score = 33.6 bits (75), Expect = 1.6
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 182 SENENKKTSLDKNKGEKINLLNNVNGDKKNQEKKRAQNSKTTSFPLFSDSKKLKTPENKN 3
S N ++ S D N NVNG+ N + R +S T+SFP F+ K K +KN
Sbjct: 556 SVNNSRSASFDNN---------NVNGNGNNTNR-RLVSSSTSSFPKFNSDTKRKEESDKN 605
>gi|3420751 (AF079448) cytochrome c oxidase assembly protein [Dictyostelium
discoideum]
Length = 482
Score = 33.6 bits (75), Expect = 1.6
Identities = 24/71 (33%), Positives = 37/71 (51%), Gaps = 3/71 (4%)
Query: 251 KDSNKLNKFEKEVENPSNIFLKFSENENKKTSLDKNKGEK---INLLNNVNGDKKNQEKK 81
+ ++KLN N +N + +F NENK S ++ K E+ N NN D K E+
Sbjct: 52 QSNSKLNSIISLNNNNNNYYKRFYSNENKTNSNEQVKEEEKTNDNSSNNNEEDYKEPEQS 111
Query: 80 RAQNSKTTSFPLFS 39
+ N K ++ LFS
Sbjct: 112 KG-NKKVGNWLLFS 124
>gi|4493880|emb|CAB38989| (AL034558) predicted using hexExon; MAL3P2.2 (PFC0165w), Hypothetical
protein, len: 1676 aa [Plasmodium falciparum]
Length = 2417
Score = 33.6 bits (75), Expect = 1.6
Identities = 19/75 (25%), Positives = 39/75 (51%), Gaps = 3/75 (4%)
Query: 233 NKFEKEVENPSNIFLKFSE---NENKKTSLDKNKGEKINLLNNVNGDKKNQEKKRAQNSK 63
NK++ +NP++ + N+N +LD + + NVNG N + + +
Sbjct: 1897 NKYKLSYQNPTSFNNDINSEYVNDNFNDNLDDSNDTRQVTKENVNGTNYNNNVSKYNHMQ 1956
Query: 62 TTSFPLFSDSKKLKTPEN 9
T++ P+ S+S ++K +N
Sbjct: 1957 TSNNPIESNSVQIKRKKN 1974
>gi|3845165 (AE001390) hypothetical protein [Plasmodium falciparum]
Length = 1247
Score = 33.6 bits (75), Expect = 1.6
Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 200 NIFLKFSENENK--KTSLDKNKGEKINLLNNVNGDKKNQEKKRAQNSKTTSFPLFSDSKK 27
N+FLK ++N+NK + +KNK +K + + K+ +++K + K +++
Sbjct: 1018 NLFLKKNKNKNKIKNKNKNKNKNKKTQIQIQIQIQKELEKEKEKEKEKYKQKKNNNNNNN 1077
Query: 26 LKTPENKN 3
+K+P +KN
Sbjct: 1078 IKSPIHKN 1085
>gi|3845254 (AE001412) hypothetical protein [Plasmodium falciparum]
Length = 972
Score = 33.6 bits (75), Expect = 1.6
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 377 FDEEDKRRKANIAEKKEKTFIFP----SALELMXXXXXXXXXXRLFKDSNKLNKFEKEVE 210
F E KR+K +KK K + P S+ F S+ + + +
Sbjct: 562 FFNEAKRKKKKKKKKKRKNYNNPNYPYSSSSSSSSSSSSSSSSSSFSSSSVSSYYSDDFY 621
Query: 209 NPSN--IFLKFSENENKKTSLDKNKGEKINLLNNVNGDKKNQEKKRAQNSK 63
SN K + + KKT+ +KNK + I N+N KKN + + QN +
Sbjct: 622 YASNGEKKKKKKKRKKKKTNTNKNKNKNI----NINEIKKNTNEVQNQNKQ 668
>gi|3132698 (AF061963) SAR DNA-binding protein-2 [Pisum sativum]
Length = 550
Score = 33.2 bits (74), Expect = 2.1
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 251 KDSNKLNKFEKEVENPSNIFLKFSENENKKTSLDKNKGEKINLLNNVNGDKKNQEKKR-- 78
K K K E VE P +K + + KK S +K E N NN+NG +K KK+
Sbjct: 472 KREKKEEKVEDVVEEPEQEVVKKEKKKKKKESTEK--AEVQNGDNNLNGGEK---KKKRK 526
Query: 77 --AQNSKTTSFPLFSDSKKLK 21
A+ TT P KK K
Sbjct: 527 KSAEEEDTTDMPSKKKEKKKK 547
>gi|3789903 (AF081798) diaminopimelate epimerase DafE [Dictyostelium
discoideum]
Length = 351
Score = 32.8 bits (73), Expect = 2.7
Identities = 23/76 (30%), Positives = 34/76 (44%)
Query: 245 SNKLNKFEKEVENPSNIFLKFSENENKKTSLDKNKGEKINLLNNVNGDKKNQEKKRAQNS 66
+N+ N E E N +N + N N + + N N+ NN N + NQE ++
Sbjct: 16 NNQNNNIEIEQNNNNNNNNNNNNNNNNNNNNNNNNNNNNNVNNNNNNNNNNQEPHHNEDL 75
Query: 65 KTTSFPLFSDSKKLKT 18
K P FS +LKT
Sbjct: 76 K----PFFS-RNRLKT 86
>gi|3649755|emb|CAB11104| (Z98547) predicted using hexExon; MAL3P3.3 (PFC0335c), Hypothetical
protein, len: 3725 aa [Plasmodium falciparum]
Length = 3724
Score = 32.8 bits (73), Expect = 2.7
Identities = 22/82 (26%), Positives = 38/82 (45%), Gaps = 1/82 (1%)
Query: 248 DSNKLNKFEKEVENPSNIFLKFSENENKKTSLDKNKGEKINLLNNVNG-DKKNQEKKRAQ 72
D N + + +E + + + ++ ENK +KN EK N + N +KKN +K+
Sbjct: 1064 DENNIEQINEE-NSKKGVRISGTDMENKNDMENKNDMEKKNDMEKKNDIEKKNDMEKKND 1122
Query: 71 NSKTTSFPLFSDSKKLKTPENKN 3
K +D +K EN+N
Sbjct: 1123 MEKKNDMEKKNDMEKKNDMENEN 1145
>gi|3845262 (AE001414) BRAHMA ortholog (DNA helicase superfamily II)
[Plasmodium falciparum]
Length = 1997
Score = 32.8 bits (73), Expect = 2.7
Identities = 24/82 (29%), Positives = 42/82 (50%)
Query: 251 KDSNKLNKFEKEVENPSNIFLKFSENENKKTSLDKNKGEKINLLNNVNGDKKNQEKKRAQ 72
K+ N N+ + E+EN K N+N+K +NK EK N N + + +N+++K +
Sbjct: 164 KEKNNKNEKDDEMENK-----KEKNNKNEKDDEMENKKEK-NNKNEKDDEMENKKEKNNK 217
Query: 71 NSKTTSFPLFSDSKKLKTPENK 6
N K ++KK K +N+
Sbjct: 218 NEKDDEM----ENKKEKNNKNE 235
Score = 32.8 bits (73), Expect = 2.7
Identities = 24/82 (29%), Positives = 42/82 (50%)
Query: 251 KDSNKLNKFEKEVENPSNIFLKFSENENKKTSLDKNKGEKINLLNNVNGDKKNQEKKRAQ 72
K+ N N+ + E+EN K N+N+K +NK EK N N + + +N+++K +
Sbjct: 132 KEKNNKNEKDDEMENK-----KEKNNKNEKDDEMENKKEK-NNKNEKDDEMENKKEKNNK 185
Query: 71 NSKTTSFPLFSDSKKLKTPENK 6
N K ++KK K +N+
Sbjct: 186 NEKDDEM----ENKKEKNNKNE 203
>gi|2642509 (AF030691) CG1 [Plasmodium falciparum]
Length = 939
Score = 32.1 bits (71), Expect = 4.7
Identities = 23/67 (34%), Positives = 31/67 (45%), Gaps = 4/67 (5%)
Query: 251 KDSNKLNKFEKEVENPSNIFLKFSENENKKTSLDKNKGEKINLLNNVNG----DKKNQEK 84
KD NK N + E+ N+ +K +ENEN E +N+ NVNG D NQ
Sbjct: 791 KDPNKKNCNKGNKEHKKNVNIKNNENEN----------ENVNVNVNVNGGDYKDHFNQHD 840
Query: 83 KRAQNSKTTSF 51
K N +
Sbjct: 841 KNRYNKNKMDY 851
>gi|4049753 (AF063866) ORF MSV230 hypothetical protein [Melanoplus sanguinipes
entomopoxvirus]
Length = 670
Score = 32.1 bits (71), Expect = 4.7
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 236 LNKFEKEVENP-SNIFLKFSENENKKTSLDK------NKGEKINLLNNVNGDKK-NQEKK 81
+NK E E +N S + + S+N + K +++K N K+N+ + N D K N ++
Sbjct: 114 INKLENESQNSDSKVNIDESQNSDSKVNINKLENESQNSDSKVNIDESQNSDSKVNIDES 173
Query: 80 RAQNSKTTSFPLFSDSKKLKTPENKN 3
+ +SK + K+ E++N
Sbjct: 174 QNSDSKVNIDESQNSDSKVNIDESQN 199
Score = 31.3 bits (69), Expect = 8.0
Identities = 19/58 (32%), Positives = 35/58 (59%), Gaps = 4/58 (6%)
Query: 236 LNKFEKEVENP-SNIFLKFSENENKKTSLDK--NKGEKINLLNNVNGDKK-NQEKKRAQN 69
+NK E E +N S + + S+N + K ++D+ N K+N+ + N D K N ++ + +
Sbjct: 142 INKLENESQNSDSKVNIDESQNSDSKVNIDESQNSDSKVNIDESQNSDSKVNIDESQNSD 201
Query: 68 SK 63
SK
Sbjct: 202 SK 203
>gi|3845107 (AE001375) hypothetical protein [Plasmodium falciparum]
Length = 1979
Score = 32.1 bits (71), Expect = 4.7
Identities = 17/58 (29%), Positives = 32/58 (54%)
Query: 242 NKLNKFEKEVENPSNIFLKFSENENKKTSLDKNKGEKINLLNNVNGDKKNQEKKRAQN 69
+K+N ++ E+ N + +NE+K ++ + +K+N LN N DK N K+ +N
Sbjct: 784 HKINTLNEQNEHKINTLNE--QNEHKINTMKEEYEDKMNTLNEQNEDKMNSLKEEYEN 839
>gi|2642511 (AF030690) CG1 [Plasmodium falciparum]
Length = 950
Score = 32.1 bits (71), Expect = 4.7
Identities = 23/67 (34%), Positives = 31/67 (45%), Gaps = 4/67 (5%)
Query: 251 KDSNKLNKFEKEVENPSNIFLKFSENENKKTSLDKNKGEKINLLNNVNG----DKKNQEK 84
KD NK N + E+ N+ +K +ENEN E +N+ NVNG D NQ
Sbjct: 802 KDPNKKNCNKGNKEHKKNVNIKNNENEN----------ENVNVNVNVNGGDYKDHFNQHD 851
Query: 83 KRAQNSKTTSF 51
K N +
Sbjct: 852 KNRYNKNKMDY 862
>gi|547925|sp|Q00749|MSME_STRMU MULTIPLE SUGAR-BINDING PROTEIN PRECURSOR >gi|282317|pir||B42400
sugar-binding protein MsmE - Streptococcus mutans
>gi|153737 (M77351) sugar-binding protein [Streptococcus
mutans]
Length = 420
Score = 31.7 bits (70), Expect = 6.1
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 209 NPSNIFLKFSENENKKTSLDKNKGEKINLLNNVNGDKKNQEKKRAQNSKTTSFPLFSDSK 30
N +N +L+FS+ + KTS K + + L N+ D NQ+K S + F++ K
Sbjct: 210 NAANKYLRFSQPNSIKTSDKILKEDMVRL--NLLADDGNQQKNWKGASYNDALVAFANEK 267
Query: 29 KLKTP 15
L TP
Sbjct: 268 ALMTP 272
>gi|3845099 (AE001373) predicted secreted protein [Plasmodium falciparum]
Length = 1192
Score = 31.7 bits (70), Expect = 6.1
Identities = 18/44 (40%), Positives = 28/44 (62%), Gaps = 4/44 (9%)
Query: 191 LKFSENENK----KTSLDKNKGEKINLLNNVNGDKKNQEKKRAQNSKT 60
L +S+ NK T +D NKG+K N + +KKN++KK ++ KT
Sbjct: 232 LGYSDFMNKMKYQNTQIDNNKGKKTT--NTMEKNKKNRDKKHSKKRKT 277
>gi|3845297 (AE001421) hypothetical protein [Plasmodium falciparum]
Length = 2380
Score = 31.7 bits (70), Expect = 6.1
Identities = 25/76 (32%), Positives = 36/76 (46%), Gaps = 4/76 (5%)
Query: 245 SNKLNKFEKEVENPSNIFLKFSENENKKTSLDK-NKGEKINLLNNVNGDKKNQEKKRAQN 69
+ K N + N +NI + N N + NKG N NN++G +KN+ R N
Sbjct: 1458 TGKNNTTNNNISNNNNISNNINNNNNINNICSRDNKGNPTNY-NNISGKEKNRNIFRKWN 1516
Query: 68 S---KTTSFPLFSDSKKLKT 18
S KT S + +K KT
Sbjct: 1517 SKDLKTNSNNYIATNKLSKT 1536
>gi|3024918|sp|Q58299|Y889_METJA HYPOTHETICAL PROTEIN MJ0889 >gi|2128557|pir||A64411 hypothetical
protein MJ0889 - Methanococcus jannaschii >gi|1592315
(U67533) M. jannaschii predicted coding region MJ0889
[Methanococcus jannaschii]
Length = 469
Score = 31.3 bits (69), Expect = 8.0
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 10/56 (17%)
Query: 251 KDSNKLNKFEKEVENPSNIF----------LKFSENENKKTSLDKNKGEKINLLNNVNGD 102
KD K KF + +ENP ++ KF +NEN K + K I L+N++ +
Sbjct: 148 KDWKKFIKFSEVIENPKSVVACSNKLDGKVFKF-KNENNKLIAEPFKYRIIQLINSIISN 206
Query: 101 KKNQEK 84
++N +K
Sbjct: 207 RENIDK 212
>gi|1685115 (U68754) putative transcription factor [Dictyostelium discoideum]
Length = 872
Score = 31.3 bits (69), Expect = 8.0
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 248 DSNKLNKFEKEVENPSNIFLKFSENENKKTSLDKNKGEKINLLNNVNGDKKNQEK 84
+SN N + N SN+ +N N + ++D N N NN N + N K
Sbjct: 60 NSNTNNNSNNKNNNKSNLLDIILDNNNLENNIDNNNNNNNNNNNNNNNNNNNNSK 114
>gi|4493978|emb|CAB39037| (AL034559) predicted using hexExon; MAL3P7.21 (PFC0960c),
Hypothetical protein, len: 1929 aa [Plasmodium
falciparum]
Length = 1928
Score = 31.3 bits (69), Expect = 8.0
Identities = 21/65 (32%), Positives = 29/65 (44%)
Query: 251 KDSNKLNKFEKEVENPSNIFLKFSENENKKTSLDKNKGEKINLLNNVNGDKKNQEKKRAQ 72
K N ++E+ SN K SE KK L +N +NN+N KN+E
Sbjct: 651 KVKGHFNNIKEELAISSNNSSKNSEQVRKKKLLKEN-------MNNLNNVNKNEETNMIY 703
Query: 71 NSKTT 57
N+K T
Sbjct: 704 NNKET 708
>gi|1041785 (U36927) rhoptry protein [Plasmodium yoelii]
Length = 2401
Score = 31.3 bits (69), Expect = 8.0
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 257 LFKDSNKLNKFEKEVENPSNIFLKFSENENKKTSLDKNKGEKINLLNNVNGDKKNQE 87
L ++ N LN EK +E+ N + E++K LD+ + N+ +NVN KKN E
Sbjct: 1277 LIENKNILNTLEKLLESLKN---QKKNIEDQKKELDEVNSKIKNIESNVNQHKKNYE 1330
>gi|3745885 (L33180) AcMNPV orf58 [Bombyx mori nuclear polyhedrosis virus]
Length = 171
Score = 31.3 bits (69), Expect = 8.0
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 176 NENKKTSLDKNKGEKINLLNNVNGDKKNQEKKRAQNSKTTSFPLFSDSKKLKTPENK 6
NEN T D E++N N+ K+ KRA NSK+ P+ K + TP +
Sbjct: 96 NENTSTDYDTEDEERVNTFNS---RKRRVVAKRAFNSKSKKIPI---GKVVSTPRKR 146
>gi|3845229 (AE001405) hypothetical protein [Plasmodium falciparum]
Length = 387
Score = 31.3 bits (69), Expect = 8.0
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 239 KLNKFEKEVENPSNIFLKFSENENKKT-SLDKNKGEKINLLNNVNGDKKNQEKK 81
K NK E N SNI K +N+K +KNK N NN ++NQ++K
Sbjct: 51 KKNKKENNESNKSNIDKKLLTEKNRKNEEHNKNKNINNNYYNNDFEKEQNQQRK 104
>gi|1816500 (L06303) 8b2 protein [Plasmodium falciparum]
Length = 286
Score = 31.3 bits (69), Expect = 8.0
Identities = 23/65 (35%), Positives = 34/65 (51%), Gaps = 4/65 (6%)
Query: 257 LFKDSNKLNKFEKEVENPSNIFLKFSENENKKTSLDKNKGEKINLLNN----VNGDKKNQ 90
++ D NK ++ E N NI + ENK NK EK N+ N +NGD N
Sbjct: 121 IYNDKNKNINYKGE--NNMNIH-NSNVYENKYEMNFDNKNEKFNIPNKRYIYLNGDDSNY 177
Query: 89 EKKRAQNSK 63
+KK+ + +K
Sbjct: 178 KKKKQRTNK 186
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Apr 12, 1999 12:54 PM
Number of letters in database: 112,640,273
Number of sequences in database: 368,476
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98852302
Number of Sequences: 368476
Number of extensions: 1639522
Number of successful extensions: 7401
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 7288
Number of HSP's gapped (non-prelim): 145
length of query: 259
length of database: 112640273
effective HSP length: 54
effective length of query: 204
effective length of database: 92742569
effective search space: 18919484076
effective search space used: 18919484076
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 68 (30.9 bits)