BLASTX 2.0.8 [Jan-05-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 12VII-20R
(890 letters)
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
369,800 sequences; 113,023,754 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|3982831 (AF083343) 101 kDa heat shock protein; HSP101 [Nicoti... 243 2e-63
gi|1170149|sp|P42730|H101_ARATH HEAT SHOCK PROTEIN 101 >gi|53744... 241 6e-63
gi|4558484|gb|AAD22629|AF097363_1 (AF097363) heat shock protein ... 238 3e-62
gi|530207 (L35272) heat shock protein [Glycine max] 238 4e-62
gi|3982833 (AF083344) 101 kDa heat shock protein; HSP101 [Tritic... 235 3e-61
gi|4481954|emb|CAB38512| (AL035637) putative protease subunit; c... 234 6e-61
gi|2058336|emb|CAB08073| (Z94053) heat shock protein 100 [Leishm... 231 4e-60
gi|3560150|emb|CAA20737| (AL031534) Chaperonin hsp78p [Schizosac... 230 1e-59
gi|1946209|emb|CAA86116| (Z38058) 100 kDa heat shock protein (Hs... 226 1e-58
gi|3860606|emb|CAA14507| (AJ235270) CLPB PROTEIN (clpB) [Rickett... 225 3e-58
gi|145053 (M32229) ATP-dependent protease [Dichelobacter nodosus] 224 5e-58
gi|399265|sp|P17422|CLPB_BACNO CLPB PROTEIN >gi|97341|pir||C3590... 224 5e-58
gi|3360502 (AF061279) heat shock protein [Plectonema boryanum] 223 1e-57
gi|102073|pir||E35905 ATP-dependent Clp proteinase (EC 3.4.21.-)... 221 4e-57
gi|399266|sp|P31543|CLP_TRYBB HEAT SHOCK PROTEIN 100 (CLP PROTEI... 221 4e-57
gi|1168973|sp|P44403|CLPB_HAEIN CLPB PROTEIN >gi|1073890|pir||F6... 221 4e-57
gi|2493732|sp|P71404|CLPB_HELPY CLPB PROTEIN >gi|2313356|gb|AAD0... 220 1e-56
gi|2493734|sp|P74361|CLPB_SYNY3 CLPB PROTEIN >gi|1653543|dbj|BAA... 219 2e-56
gi|1563721|emb|CAA69406| (Y08238) heat shock protein [Helicobact... 218 5e-56
gi|4127451|emb|CAA11856| (AJ224159) clpB [Bacillus anthracis] 218 5e-56
gi|2244823|emb|CAB10246| (Z97336) heat shock protein [Arabidopsi... 217 1e-55
gi|4154766 (AE001462) HEAT SHOCK PROTEIN [Helicobacter pylori J99] 216 1e-55
gi|1705924|sp|P53533|CLPB_SYNP7 CLPB PROTEIN >gi|885934 (U20646)... 216 2e-55
gi|3482974|emb|CAA20530| (AL031369) ATP-dependent Clp proteinase... 215 4e-55
gi|3150046 (AF016634) ClpB chaperone homolog [Lactococcus lactis... 214 6e-55
gi|1346246|sp|P31539|H104_YEAST HEAT SHOCK PROTEIN 104 >gi|21181... 213 1e-54
gi|1705922|sp|P53532|CLPB_CORGL CLPB PROTEIN >gi|1163118 (U43536... 212 2e-54
gi|2465525 (U97124) ClpB/HSP100 [Synechococcus PCC7942] 212 4e-54
gi|4098131 (U73653) clpB [Mycobacterium bovis] 211 6e-54
gi|2909505|emb|CAA17390| (AL021931) clpB [Mycobacterium tubercul... 211 6e-54
gi|1653648|dbj|BAA18560| (D90915) ClpB protein [Synechocystis sp.] 210 1e-53
gi|4102206 (AF010250) ATP dependent protease binding subunit [Sa... 208 3e-53
gi|41114|emb|CAA40846| (X57620) analogue of ATP-dependent protea... 208 3e-53
gi|2506300|sp|P03815|CLPB_ECOLI CLPB PROTEIN (HEAT SHOCK PROTEIN... 208 3e-53
gi|95711|pir||D35905 ATP-dependent Clp proteinase (EC 3.4.21.-) ... 208 3e-53
gi|4376410|gb|AAD18297| (AE001601) Clp Protease ATPase [Chlamydi... 208 4e-53
gi|3322325 (AE001191) ATP-dependent Clp protease subunit B (clpB... 207 7e-53
gi|3328511 (AE001285) Clp Protease ATPase [Chlamydia trachomatis] 205 5e-52
gi|1705923|sp|P47597|CLPB_MYCGE CLPB PROTEIN >gi|1361459|pir||C6... 204 6e-52
gi|3661535 (AF090118) heat shock protein hsp104 [Plasmodium falc... 203 1e-51
gi|3063758|emb|CAA73776| (Y13333) heat shock protein [Campylobac... 203 2e-51
gi|2118113|pir||S67315 heat shock protein 78, mitochondrial - ye... 202 3e-51
gi|1197585 (U46549) ClpB [Plasmodium berghei] 201 7e-51
gi|2493733|sp|P75247|CLPB_MYCPN CLPB PROTEIN >gi|2146076|pir||S7... 201 7e-51
gi|462355|sp|P33416|HSP7_YEAST MITOCHONDRIAL HEAT SHOCK PROTEIN ... 197 8e-50
gi|228154|prf||1717391A protein Hsp104 [Saccharomyces cerevisiae] 195 3e-49
gi|2984005 (AE000750) ATPase subunit of ATP-dependent protease [... 194 9e-49
gi|1168972|sp|P46523|CLPA_BRANA ATP-DEPENDENT CLP PROTEASE ATP-B... 187 1e-46
gi|4322269|gb|AAD15989| (AF076980) heat shock protein ClpB [Stre... 185 3e-46
gi|2921158 (AF022909) ClpC [Arabidopsis thaliana] 185 3e-46
gi|3913865|sp|Q54316|HLYB_TREHY HEMOLYSIN B >gi|511145|emb|CAA51... 185 5e-46
gi|399213|sp|P31542|CLAB_LYCES ATP-DEPENDENT CLP PROTEASE ATP-BI... 183 1e-45
gi|461753|sp|P35100|CLPA_PEA ATP-DEPENDENT CLP PROTEASE ATP-BIND... 182 3e-45
gi|4127449|emb|CAA11855| (AJ224158) clpC [Bacillus anthracis] 181 5e-45
gi|586900|sp|P37571|MECB_BACSU NEGATIVE REGULATOR OF GENETIC COM... 181 7e-45
gi|399212|sp|P31541|CLAA_LYCES ATP-DEPENDENT CLP PROTEASE ATP-BI... 180 9e-45
gi|4105131 (AF043539) ClpC protease [Spinacia oleracea] 179 3e-44
gi|3328700 (AE001301) ClpC Protease ATPase [Chlamydia trachomatis] 176 1e-43
gi|1314297 (U40604) ClpC ATPase [Listeria monocytogenes] 176 2e-43
gi|2983728 (AE000733) ATP-dependent Clp protease [Aquifex aeolicus] 174 9e-43
gi|4376719|gb|AAD18581| (AE001626) ClpC Protease [Chlamydia pneu... 173 1e-42
gi|3218360|emb|CAA19619| (AL023861) clp protease ATP binding sub... 172 3e-42
gi|116519|sp|P05444|CLPA_RHOBL CLPA HOMOLOG PROTEIN >gi|67630|pi... 171 6e-42
gi|4103472|gb|AAD01783| (AF023422) ClpC [Lactococcus lactis] 170 1e-41
gi|1001555|dbj|BAA10182| (D64000) ATP-dependent Clp protease reg... 169 2e-41
gi|1705925|sp|P51332|CLPC_PORPU ATP-DEPENDENT CLP PROTEASE ATP-B... 169 2e-41
gi|2506299|sp|P15716|CLPA_ECOLI ATP-DEPENDENT CLP PROTEASE ATP-B... 168 5e-41
gi|755163 (U16134) ClpC [Synechococcus sp.] 168 5e-41
gi|3602934|gb|AAC35595| (AF041468) Clp protease ATP binding subu... 168 7e-41
gi|1352089|sp|P49574|CLPC_ODOSI ATP-DEPENDENT CLP PROTEASE ATP-B... 168 7e-41
gi|67629|pir||SUECCA ATP-dependent Clp proteinase (EC 3.4.21.-) ... 168 7e-41
gi|140227|sp|P24428|CLPC_MYCLE PROBABLE ATP-DEPENDENT CLP PROTEA... 164 6e-40
gi|98790|pir||S11163 ATP-dependent proteinase homolog - Mycobact... 164 6e-40
gi|2113980|emb|CAB08932| (Z95557) clpC [Mycobacterium tuberculosis] 164 1e-39
gi|3323113 (AE001251) ATP-dependent Clp protease subunit A (clpA... 163 1e-39
gi|1542952|emb|CAA69163| (Y07826) ClpB-homologue [Thermus thermo... 163 2e-39
gi|3322841 (AE001230) ATPase (clpC) [Treponema pallidum] 162 2e-39
gi|2633741|emb|CAB13243| (Z99111) ATP-dependent Clp protease-lik... 161 9e-39
gi|512562|emb|CAA53534| (X75930) ClpC [Bacillus subtilis] 159 3e-38
gi|4103474|gb|AAD01784| (AF023423) ClpB [Lactococcus lactis] 158 6e-38
gi|2688774 (AE001181) ATP-dependent Clp protease, subunit C (clp... 157 1e-37
gi|4103470|gb|AAD01782| (AF023421) ClpE [Lactococcus lactis] 145 4e-34
gi|2688268 (AE001142) ATP-dependent Clp protease, subunit A (clp... 143 1e-33
gi|1169544|sp|P42762|ERD1_ARATH ERD1 PROTEIN PRECURSOR >gi|54185... 143 2e-33
gi|4154534 (AE001442) ATP-DEPENDENT PROTEASE,ATP-BINDING SUBUNIT... 142 3e-33
gi|4336198|gb|AAD17691| (AF076664) ATP-dependent protease ClpE [... 136 2e-31
gi|871784 (L34677) Clp-like ATP-dependent protease binding subun... 136 3e-31
gi|2313108|gb|AAD07102| (AE000525) ATP-dependent C1p protease (c... 136 3e-31
gi|1168974|sp|Q06716|CLPL_LACLA ATP-DEPENDENT PROTEASE ATP-BINDI... 129 3e-29
gi|1651405|dbj|BAA35606| (D90726) ATP-dependent Clp protease ATP... 124 9e-28
gi|1575013 (U51235) ClpB [Mycoplasma capricolum] 96 3e-19
gi|2983243 (AE000699) chromosome assembly protein homolog [Aquif... 51 1e-05
gi|1280089 (U55369) weak similarity to myosin heavy chain [Caeno... 50 3e-05
gi|2129174|pir||A64505 P115 homolog - Methanococcus jannaschii 48 9e-05
gi|2826443 (U67604) chromosome segretation protein (smc1) [Metha... 48 9e-05
gi|2674350 (U93121) M-phase phosphoprotein-1 [Homo sapiens] 48 9e-05
gi|2983515 (AE000718) hypothetical protein [Aquifex aeolicus] 46 3e-04
gi|3845272 (AE001417) hypothetical protein [Plasmodium falciparum] 43 0.002
gi|1514671|emb|CAA68905| (Y07624) nuclear/mitotic apparatus prot... 43 0.003
gi|2293014|emb|CAA71688| (Y10687) purine NTPase [Sulfolobus acid... 43 0.004
gi|3551509|dbj|BAA33010| (AB016784) RET-II [Mus musculus] 43 0.004
gi|3211974 (AF067807) paramyosin related protein [Echinococcus g... 41 0.011
gi|4191344 (AF085199) golgin-84 [Homo sapiens] 41 0.011
gi|2664236|emb|CAA15821| (AL009227) coiled coil protein [Schizos... 41 0.011
gi|2649004 (AE000995) chromosome segregation protein (smc1) [Arc... 41 0.011
gi|4456475|emb|CAB36967| (AJ132949) rfg5 protein [Homo sapiens] 41 0.011
gi|2135241|pir||I38153 gene retII protein - human >gi|36009|emb|... 41 0.011
gi|1213484 (U41740) trans-Golgi p230 [Homo sapiens] >gi|1589554|... 41 0.015
gi|4504065|oth|NP_002069|PGOLGA4 golgi autoantigen, golgin subfa... 41 0.015
gi|1236759|emb|CAA58041| (X82834) 256 kD golgin [Homo sapiens] 41 0.015
gi|266890|sp|Q00799|RBP2_PLAVB RETICULOCYTE BINDING PROTEIN 2 41 0.015
gi|280512|pir||B42771 reticulocyte-binding protein 2 - Plasmodiu... 41 0.015
gi|3845107 (AE001375) hypothetical protein [Plasmodium falciparum] 40 0.019
gi|544198|sp|P35458|DYNA_CHICK DYNACTIN, 117 KD ISOFORM >gi|1046... 40 0.019
gi|1730826|sp|P53865|YNW5_YEAST HYPOTHETICAL 67.4 KD PROTEIN IN ... 40 0.019
gi|1709541|sp|P47459|P65H_MYCGE PROLINE-RICH P65 PROTEIN HOMOLOG... 40 0.019
gi|457146 (L27838) rhoptry protein [Plasmodium yoelii] 40 0.025
gi|127774|sp|P08799|MYS2_DICDI MYOSIN II HEAVY CHAIN, NON MUSCLE... 40 0.025
gi|2285985|emb|CAA63750| (X93464) M-like protein [Streptococcus ... 39 0.033
gi|4239734|emb|CAA10769| (AJ132769) hypothetical protein [Crypto... 39 0.033
gi|730753|sp|P38989|SMC2_YEAST CHROMOSOME SEGREGATION PROTEIN SM... 39 0.043
gi|2314102|gb|AAD08008| (AE000604) H. pylori predicted coding re... 39 0.043
gi|3925685|emb|CAA70844| (Y09631) PIBF1 protein [Homo sapiens] 39 0.043
gi|2128791|pir||A64465 hypothetical protein MJ1322 - Methanococc... 39 0.043
gi|2982915 (AE000677) putative protein [Aquifex aeolicus] 39 0.043
gi|399943|sp|P31540|HS98_NEUCR HEAT SHOCK PROTEIN HSP98 >gi|3229... 39 0.056
gi|3435244 (AF083322) centriole associated protein CEP110 [Homo ... 39 0.056
gi|2497520|sp|Q12840|KINN_HUMAN NEURONAL KINESIN HEAVY CHAIN (NK... 39 0.056
gi|3758855|emb|CAB11140| (Z98551) predicted using hexExon; MAL3P... 39 0.056
gi|4494912|gb|AAD21334| (AF083501) transport protein [Macaca mul... 39 0.056
gi|4582571|emb|CAB40350| (AJ131892) Hyperion protein, 419 kD iso... 38 0.074
gi|699398 (U18544) puff C4B protein [Trichosia pubescens] >gi|69... 38 0.074
gi|125416|sp|P28738|KINN_MOUSE NEURONAL KINESIN HEAVY CHAIN (NKH... 38 0.097
gi|3628755 (U42424) corneal epithelial Rho-associated-ser/thr ki... 38 0.097
gi|3929108 (AF067179) kinesin heavy chain [Mus musculus] 38 0.097
gi|2293505 (AF010473) Sp8 [Schizosaccharomyces pombe] 38 0.097
gi|3875553|emb|CAB02893| (Z81055) cDNA EST EMBL:D34991 comes fro... 38 0.097
gi|127737|sp|P12844|MYSA_CAEEL MYOSIN HEAVY CHAIN A (MHC A) >gi|... 38 0.13
gi|3057072 (AF013962) TsJ5 [Trichinella spiralis] 38 0.13
gi|3879709|emb|CAB03330| (Z81118) Similarity to Human endosomal ... 38 0.13
gi|3282121 (AF012285) Cse15 [Bacillus subtilis] 38 0.13
gi|3878549|emb|CAB01576| (Z78199) similar to myosin heavy chain;... 38 0.13
gi|2132082|pir||S67087 hypothetical protein YOR195w - yeast (Sac... 38 0.13
gi|4038508|emb|CAA90998| (Z54238) Weak similarity to myosin prot... 38 0.13
gi|1621445 (U72072) sporulation protein Cse15 [Bacillus subtilis] 38 0.13
gi|2633796|emb|CAB13298| (Z99111) alternate gene name: cse15; si... 38 0.13
gi|1208481|dbj|BAA10649| (D64004) hypothetical protein [Synechoc... 38 0.13
gi|1661003|dbj|BAA13639| (D88539) synaptonemal complex protein 1... 37 0.17
gi|662259 (L39769) ORF1 [Plasmid pIP501] 37 0.17
gi|3024612|sp|Q62209|SCP1_MOUSE SYNAPTONEMAL COMPLEX PROTEIN 1 (... 37 0.17
gi|2649562 (AE001032) purine NTPase, putative [Archaeoglobus ful... 37 0.17
gi|1206021 (U48362) hook [Drosophila melanogaster] >gi|3005089|g... 37 0.17
gi|60607|emb|CAA49168| (X69325) A-type inclusion protein [Ectrom... 37 0.17
gi|735904 (L41069) testicular protein [Mus musculus] 37 0.17
gi|3024541|sp|O42184|REST_CHICK RESTIN >gi|2338714 (AF014012) re... 37 0.17
gi|2905649 (AF045650) cytoplasmic linker protein CLIP-170 [Gallu... 37 0.17
gi|1151158 (U43145) repeat organellar protein [Plasmodium chabaudi] 37 0.17
gi|2749771|dbj|BAA24108| (AB000619) tsec-1 [Mus musculus] 37 0.17
gi|3041710|sp|Q01202|MYSP_BRUMA PARAMYOSIN >gi|1679786 (U77590) ... 37 0.17
gi|3668187|dbj|BAA33452| (AB017819) myosin heavy chain [Theragra... 37 0.22
gi|2500794|sp|Q90988|SCII_CHICK CHROMOSOME SCAFFOLD PROTEIN SCII... 37 0.22
gi|4107313|emb|CAA22641| (AL035075) putative myosin heavy chain ... 37 0.22
gi|4493894|emb|CAB39003| (AL034558) predicted using hexExon; MAL... 37 0.22
gi|2088796 (AF003150) weak similarity to the bZIP superfamily of... 37 0.22
gi|2204269|emb|CAA97648| (Z73259) ORF YLR086w [Saccharomyces cer... 37 0.22
gi|2425111 (AF019980) ZipA [Dictyostelium discoideum] 37 0.22
gi|2131771|pir||S64918 hypothetical protein YLR086w - yeast (Sac... 37 0.22
gi|2128750|pir||E64456 hypothetical protein MJ1254 - Methanococc... 37 0.22
gi|1777305|dbj|BAA19070| (AB000214) myosin heavy chain [Theragra... 37 0.22
gi|547976|sp|Q02171|MYSP_ONCVO PARAMYOSIN >gi|159922 (M95813) pa... 36 0.29
gi|1000094 (U30872) mitosin [Homo sapiens] 36 0.29
gi|309695 (M77713) major merozoite surface antigen [Plasmodium f... 36 0.29
gi|1352931|sp|P47166|YJ9C_YEAST HYPOTHETICAL 81.2 KD PROTEIN IN ... 36 0.29
gi|1514696 (U58512) Rho-associated, coiled-coil containing prote... 36 0.29
gi|2498536|sp|P55937|G160_MOUSE GOLGIN-160 (MALE-ENHANCED ANTIGE... 36 0.29
gi|2224697|dbj|BAA20832| (AB002376) KIAA0378 [Homo sapiens] 36 0.29
gi|1346587|sp|P04933|MSP1_PLAFW MEROZOITE SURFACE PROTEIN 1 PREC... 36 0.29
gi|3218398|emb|CAA19588| (AL023860) coiled coil protein [Schizos... 36 0.29
gi|4455909|emb|CAB36903| (AJ131294) major surface protein-1 [Clo... 36 0.29
gi|84241|pir||A24594 probable major surface antigen (83K, 19K, 4... 36 0.29
gi|1345731|sp|P49454|CENF_HUMAN CENP-F KINETOCHORE PROTEIN >gi|9... 36 0.29
gi|86358|pir||A29320 myosin heavy chain, embryonic - chicken 36 0.29
gi|1346637|sp|P02565|MYSE_CHICK MYOSIN HEAVY CHAIN, FAST SKELETA... 36 0.29
gi|1085294|pir||PC4035 cell-cycle-dependent 350K nuclear protein... 36 0.29
gi|1208856 (U50068) C01G5.4 gene product [Caenorhabditis elegans] 36 0.29
gi|1346586|sp|P04932|MSP1_PLAFK MEROZOITE SURFACE PROTEIN 1 PREC... 36 0.29
gi|3821955 (AF061131) merozoite surface protein 1 [Plasmodium fa... 36 0.29
gi|227523|prf||1705299A myosin H [Mus musculus] 36 0.37
gi|3834619 (AF093264) homer-2b [Homo sapiens] 36 0.37
gi|677198 (L03188) putative [Saccharomyces cerevisiae] 36 0.37
gi|2688764 (AE001180) B. burgdorferi predicted coding region BB0... 36 0.37
gi|320776|pir||S30782 integrin homolog - yeast (Saccharomyces ce... 36 0.37
gi|3834617 (AF093263) homer-2a [Homo sapiens] 36 0.37
gi|4249644 (AF081530) neuralized binding protein [Homo sapiens] 36 0.37
gi|547972|sp|P13392|MYSP_DIRIM PARAMYOSIN >gi|345381|pir||A44972... 36 0.37
gi|547774|sp|P35978|KINH_STRPU KINESIN HEAVY CHAIN >gi|85370|pir... 36 0.37
gi|1717746|sp|P50754|TRIC_XENLA TROPONIN I, CARDIAC MUSCLE (TROP... 36 0.37
gi|1197168|dbj|BAA08111| (D45163) embryonic muscle myosin heavy ... 36 0.37
gi|730979|sp|P41114|TPM1_PODCA TROPOMYOSIN >gi|479659|pir||S3506... 36 0.37
gi|516826|dbj|BAA05026| (D25543) rat GCP360 [Rattus rattus] 36 0.37
gi|3093478 (AF012927) fibrinogen-binding protein [Streptococcus ... 36 0.37
gi|1903280|emb|CAA98620| (Z74105) ORF YDL058w [Saccharomyces cer... 36 0.37
gi|3821959 (AF061133) merozoite surface protein 1 [Plasmodium fa... 36 0.37
gi|137175|sp|P25386|USO1_YEAST INTRACELLULAR PROTEIN TRANSPORT P... 36 0.37
gi|547968|sp|Q99104|MY5A_MOUSE DILUTE MYOSIN HEAVY CHAIN, NON-MU... 36 0.37
gi|2133190|pir||S67593 transport protein USO1 - yeast (Saccharom... 36 0.37
gi|423123|pir||S33124 tpr protein - human 36 0.49
gi|3877858|emb|CAA84332| (Z34801) Similarity with drosohila MSP-... 36 0.49
gi|2983047 (AE000686) hypothetical protein [Aquifex aeolicus] 36 0.49
gi|37258|emb|CAA44819| (X63105) Tpr [Homo sapiens] 36 0.49
gi|140032|sp|P20203|Y31K_SSV1 HYPOTHETICAL 31.5 KD PROTEIN (ORF ... 36 0.49
gi|4507659|oth|NP_003283|PTPR translocated promoter region (to a... 36 0.49
gi|3886025 (AF106576) similar to the nucleolar protein NOF1/NOP2... 36 0.49
gi|2274851|dbj|BAA21515| (D64159) 3-7 gene product [Homo sapiens] 36 0.49
gi|2117300|emb|CAB09124| (Z95620) hypothetical protein [Schizosa... 36 0.49
gi|3024609|sp|Q15431|SCP1_HUMAN SYNAPTONEMAL COMPLEX PROTEIN 1 (... 36 0.49
gi|487106|pir||S39083 myosin heavy chain, neonatal - chicken (fr... 36 0.49
gi|3005091|gb|AAC09301| (AF044926) hook protein [Drosophila viri... 36 0.49
gi|3257095|dbj|BAA29778| (AP000003) 840aa long hypothetical cell... 36 0.49
gi|1850342 (U69668) Tpr [Homo sapiens] 36 0.49
gi|4165154 (AF115482) topoisomerase I [Nicotiana tabacum] 36 0.49
gi|3881015|emb|CAA21049| (AL031637) similar to Spectrin repeat (... 35 0.64
gi|1065448 (U40409) weak similarity to S. cervisiae NUF1 protein... 35 0.64
gi|2388564 (AC000098) ESTs gb|AA042402,gb|ATTS1380 come from th... 35 0.64
gi|3327144|dbj|BAA31640| (AB014565) KIAA0665 protein [Homo sapiens] 35 0.64
gi|309708 (M77720) major merozoite surface antigen [Plasmodium f... 35 0.64
gi|224859|prf||1202270A antigen,major surface [Plasmodium falcip... 35 0.64
gi|72393|pir||SAZQK1 major merozoite surface antigen precursor -... 35 0.64
gi|2136146|pir||S69211 serine/threonine-specific protein kinase ... 35 0.64
gi|1850913 (L03534) myosin heavy chain [Entamoeba histolytica] 35 0.64
gi|3875751|emb|CAB04089| (Z81499) similar to myosin heavy chain;... 35 0.64
gi|107134|pir||S12459 myosin beta heavy chain, skeletal muscle, ... 35 0.64
gi|4155457 (AE001518) putative [Helicobacter pylori J99] 35 0.64
gi|127743|sp|P02566|MYSB_CAEEL MYOSIN HEAVY CHAIN B (MHC B) >gi|... 35 0.64
gi|4504867|oth|NP_003949|PKIAA0646 UNKNOWN >gi|3327106|dbj|BAA31... 35 0.64
gi|3821963 (AF061135) merozoite surface protein 1 [Plasmodium fa... 35 0.64
gi|417392|sp|P32380|NUF1_YEAST NUF1 PROTEIN (SPINDLE POLY BODY S... 35 0.64
gi|3881016|emb|CAA21050| (AL031637) similar to Spectrin repeat (... 35 0.64
gi|323141|pir||A45604 major blood-stage surface antigen Pv200 - ... 35 0.64
gi|127747|sp|P04461|MYSB_RABIT MYOSIN HEAVY CHAIN, CARDIAC MUSCL... 35 0.64
gi|1503990|dbj|BAA13194| (D86958) similar to mouse CC1. [Homo sa... 35 0.64
gi|3821961 (AF061134) merozoite surface protein 1 [Plasmodium fa... 35 0.64
gi|3986194|dbj|BAA34954| (AB015484) myosin heavy chain [Dugesia ... 35 0.84
gi|266596|sp|P29616|MYSC_CHICK MYOSIN HEAVY CHAIN, CARDIAC MUSCL... 35 0.84
gi|868224 (U29381) F35D11.11 gene product [Caenorhabditis elegans] 35 0.84
gi|1289512 (U53861) slow myosin heavy chain 3 [Coturnix coturnix... 35 0.84
gi|2351221|dbj|BAA22068| (D89991) myosin heavy chain [Cyprinus c... 35 0.84
gi|2129235|pir||D64410 replication factor C large chain homolog ... 35 0.84
gi|1171612|emb|CAA64596| (X95276) Clp (C?) [Plasmodium falciparum] 35 0.84
gi|283896|pir||S18199 myosin heavy chain - chicken (fragment) >g... 35 0.84
gi|31144|emb|CAA31492| (X13100) myosin heavy chain (1167 AA) [Ho... 35 0.84
gi|171959 (L01992) myosin-like protein [Saccharomyces cerevisiae] 35 0.84
gi|547908|sp|Q02455|MLP1_YEAST MYOSIN-LIKE PROTEIN MLP1 >gi|5392... 35 0.84
gi|285152|pir||S28061 SCP1 protein - rat >gi|57213|emb|CAA48006|... 35 0.84
gi|3258278|dbj|BAA30961| (AP000007) 798aa long hypothetical tran... 35 0.84
gi|479891|pir||S35575 myosin heavy chain, cardiac muscle - chick... 35 0.84
gi|86364|pir||S05515 myosin heavy chain, skeletal muscle - chick... 35 0.84
gi|4115774|dbj|BAA36517| (AB016070) paramyosin [Mytilus gallopro... 35 0.84
gi|107143|pir||A30220 myosin heavy chain, perinatal skeletal mus... 35 0.84
gi|2462783 (U73162) M-protein [Streptococcus equi] 35 0.84
gi|3041729|sp|Q03410|SCP1_RAT SYNAPTONEMAL COMPLEX PROTEIN 1 (SC... 35 0.84
gi|127766|sp|P13538|MYSS_CHICK MYOSIN HEAVY CHAIN, SKELETAL MUSC... 35 0.84
gi|4505301|oth|NP_002463|PMYH8 myosin, heavy polypeptide 8, skel... 35 0.84
gi|2119300|pir||I38055 myosin - human >gi|558669|emb|CAA86293| (... 35 0.84
gi|3041707|sp|P13535|MYSP_HUMAN MYOSIN HEAVY CHAIN, PERINATAL SK... 35 0.84
gi|107133|pir||S12460 myosin beta heavy chain, skeletal muscle, ... 35 0.84
gi|88201|pir||S04090 myosin heavy chain, skeletal muscle, embryo... 35 0.84
gi|1335313|emb|CAA33731| (X15696) translated region (partial) [H... 35 0.84
gi|2909471|emb|CAA17357| (AL021930) hypothetical protein Rv0282 ... 35 0.84
gi|3043372|sp|P11055|MYSE_HUMAN MYOSIN HEAVY CHAIN, FAST SKELETA... 35 0.84
gi|2429350|gb|AAB70921| (AF019972) NE-rich protein [Plasmodium c... 34 1.1
gi|104776|pir||S24348 myosin heavy chain, embryonic and adult sk... 34 1.1
gi|4503179|oth|NP_003602|PCXORF5 gene encoding a protein with co... 34 1.1
gi|348307|pir||A45623 AnTat 11.17 variant surface glycoprotein -... 34 1.1
gi|1041785 (U36927) rhoptry protein [Plasmodium yoelii] 34 1.1
gi|467604|emb|CAA37135| (X52962) merozoite surface protein 1 [Pl... 34 1.1
gi|125415|sp|P21613|KINH_LOLPE KINESIN HEAVY CHAIN >gi|102714|pi... 34 1.1
gi|127771|sp||MYSS_RABIT_1 [Segment 1 of 2] MYOSIN HEAVY CHAIN, ... 34 1.1
gi|2351219|dbj|BAA22067| (D89990) myosin heavy chain [Cyprinus c... 34 1.1
gi|1168461|sp|P21249|ANT1_ONCVO MAJOR ANTIGEN >gi|530825 (U12681... 34 1.1
gi|806513|dbj|BAA09068| (D50475) myosin heavy chain [Cyprinus ca... 34 1.1
gi|4502781|oth|NP_001804|PCENPE centromere protein E (312kD) >gi... 34 1.1
gi|127755|sp|P12847|MYSE_RAT MYOSIN HEAVY CHAIN, FAST SKELETAL M... 34 1.1
gi|940233 (U32574) myosin heavy chain [Oryctolagus cuniculus] 34 1.1
gi|2827450 (AF043493) KS5 protein [Gallus gallus] 34 1.1
gi|729915|sp|Q03427|LAMC_DROME LAMIN C (PG-IF) >gi|157808 (L0793... 34 1.1
gi|806511|dbj|BAA09067| (D50474) myosin heavy chain [Cyprinus ca... 34 1.1
gi|3834611 (AF093260) homer-2b [Mus musculus] 34 1.4
gi|72984|pir||QQSA4E hypothetical protein C-403 - Staphylococcus... 34 1.4
gi|1216294 (L35238) non-muscle tropomyosin [Xenopus laevis] 34 1.4
gi|2983285 (AE000702) hypothetical protein [Aquifex aeolicus] 34 1.4
gi|3257272|dbj|BAA29955| (AP000003) 157aa long hypothetical prot... 34 1.4
gi|2688339 (AE001148) stage 0 sporulation protein J (spo0J) [Bor... 34 1.4
gi|3834609 (AF093259) homer-2a [Mus musculus] >gi|4150950|dbj|BA... 34 1.4
gi|1465866 (U64862) strong similarity to Onchocerca volvulus maj... 34 1.4
gi|127748|sp|P02564|MYSB_RAT MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ... 34 1.4
gi|487105|pir||S39082 myosin heavy chain, embryonic - chicken (f... 34 1.4
gi|321453|pir||S27938 hypothetical protein 3 - sugarcane bacilli... 34 1.4
gi|1351513|sp|P47460|HMW2_MYCGE CYTADHERENCE HIGH MOLECULAR WEIG... 34 1.4
gi|1079110|pir||S49020 nuclear lamin C protein - fruit fly (Dros... 34 1.4
gi|107132|pir||S12458 myosin beta heavy chain, cardiac and skele... 34 1.9
gi|1173836|gb|AAA86615| (U38841) membrane nuclease A [Mycoplasma... 34 1.9
gi|416720|sp|P32985|BPS2_DESAM BPS2 PROTEIN >gi|99246|pir||S2219... 34 1.9
gi|833603|emb|CAA38180| (X54278) cytoskeletal tropomyosin [Cotur... 34 1.9
gi|386970 (M25142) myosin heavy chain beta-subunit [Homo sapiens] 34 1.9
gi|29727|emb|CAA37068| (X52889) cardiac beta myosin heavy chain ... 34 1.9
gi|88195|pir||S02229 myosin beta heavy chain, cardiac muscle - h... 34 1.9
gi|130221|sp|P10894|PIP1_BOVIN 1-PHOSPHATIDYLINOSITOL-4,5-BISPHO... 34 1.9
gi|226908|prf||1611219A phospholipase C 154 [Bos taurus] 34 1.9
gi|2134996|pir||A38194 desmoplakin I - human 34 1.9
gi|4379031|emb|CAA27381| (X03741) myosin heavy chain (635 AA) [H... 34 1.9
gi|4557773|oth|NP_000248|PMYH7 myosin heavy chain 7 >gi|547966|s... 34 1.9
gi|1129173|emb|CAA63826| (X94082) KLP2 protein [Xenopus laevis] ... 34 1.9
gi|2352260 (AF000949) keratin [Canis familiaris] 34 1.9
gi|3219986|sp|Q09560|YQY1_CAEEL HYPOTHETICAL 108.9 KD PROTEIN F3... 34 1.9
gi|2194112 (U81495) unknown [Oxytricha fallax] 34 1.9
gi|2586071 (AF027728) kinesin-related protein [Xenopus laevis] 34 1.9
gi|833602|emb|CAA38179| (X54277) cardiac tropomyosin [Coturnix c... 34 1.9
gi|1147813 (M77830) desmoplakin I [Homo sapiens] 34 1.9
gi|4062999|dbj|BAA36219| (AB021681) tropomyosin [Chlamys nippone... 34 1.9
gi|3702136|emb|CAA19927| (AL031058) dJ512B11.1 (Desmoplakin I (D... 34 1.9
gi|3764015|emb|CAA15608| (AL008970) predicted using hexExon; MAL... 34 1.9
gi|3882269|dbj|BAA34494| (AB018317) KIAA0774 protein [Homo sapiens] 34 1.9
gi|915306 (U20609) paramyosin-related protein [Onchocerca gibsoni] 34 1.9
gi|1842051 (U87231) myosin heavy chain [Gallus gallus] 34 1.9
gi|2827709|emb|CAA16682| (AL021684) predicted protein [Arabidops... 34 1.9
gi|118458|sp|P15924|DESP_HUMAN DESMOPLAKIN I AND II (DPI AND DPI... 34 1.9
gi|1351174|sp|P47251|SYS_MYCGE SERYL-TRNA SYNTHETASE (SERINE--TR... 33 2.5
gi|2983555 (AE000721) putative protein [Aquifex aeolicus] 33 2.5
gi|477300|pir||A48575 paramyosin - nematode (Onchocerca volvulus) 33 2.5
gi|665935 (U20341) ORF IV [Cassava vein mosaic virus] 33 2.5
gi|806515|dbj|BAA09069| (D50476) myosin heavy chain [Cyprinus ca... 33 2.5
gi|2224613|dbj|BAA20794| (AB002334) KIAA0336 [Homo sapiens] 33 2.5
gi|2702432 (AF038613) contains similarity to nonmuscle myosins [... 33 2.5
gi|3257342|dbj|BAA30025| (AP000004) 879aa long hypothetical puri... 33 2.5
gi|386973 (M21665) beta-myosin heavy chain [Homo sapiens] 33 2.5
gi|1297319 (U53445) DOC1 [Homo sapiens] 33 2.5
gi|2808622|emb|CAA74664| (Y14289) type I keratin S5 [Oncorhynchu... 33 2.5
gi|4580769|gb|AAD24499|AF083812_1 (AF083812) mitotic checkpoint ... 33 2.5
gi|625090 (U19464) outer arm dynein beta heavy chain [Paramecium... 33 2.5
gi|1723285|sp|Q10218|YAYB_SCHPO HYPOTHETICAL 89.2 KD PROTEIN C4H... 33 2.5
gi|2688426 (AE001153) B. burgdorferi predicted coding region BB0... 33 2.5
gi|1363732|pir||S59413 probable membrane protein YLR454w - yeast... 33 2.5
gi|1079256|pir||S52696 myosin heavy chain - rainbow trout (fragm... 33 2.5
gi|11067|emb|CAA46548| (X65591) myosin II heavy chain [Schistos... 33 2.5
gi|386972 (M21664) alpha-myosin heavy chain [Homo sapiens] 33 2.5
gi|2351223|dbj|BAA22069| (D89992) myosin heavy chain [Cyprinus c... 33 2.5
gi|3875085|emb|CAB05167| (Z82264) C49C3.15 [Caenorhabditis elegans] 33 2.5
gi|2144825|pir||MWRBCB myosin beta heavy chain, cardiac muscle -... 33 2.5
gi|1082050|dbj|BAA09505| (D55635) p93dis1 [Schizosaccharomyces p... 33 2.5
gi|3874634|emb|CAA92288| (Z68159) Similarity to Yeast DNA repair... 33 2.5
gi|497649 (U09251) seryl-tRNA synthetase [Mycoplasma genitalium] 33 2.5
gi|3776579 (AC005388) Strong similarity to F22O13.22 gi|3063460 ... 33 2.5
gi|382658|prf||1819485A CENP-E protein [Homo sapiens] 33 2.5
gi|1399885 (U59751) ORF 4 [Cassava vein mosaic virus] 33 2.5
gi|3845309 (AE001424) RESA-H3 antigen [Plasmodium falciparum] 33 2.5
gi|1045294|emb|CAA91434| (Z66527) cardiac tropomyosin [Salmo tru... 33 2.5
gi|1055047 (U39849) weakly similar to myosin heavy chain [Caenor... 33 2.5
gi|2194144 (AC002062) F20P5.8 [Arabidopsis thaliana] 33 2.5
gi|422336|pir||S33068 myosin heavy chain - fluke (Schistosoma ma... 33 2.5
gi|3452562|dbj|BAA32478| (AB007689) Vesl-2 [Rattus norvegicus] 33 3.2
gi|805099 (U22018) P120 [Mycoplasma hominis] 33 3.2
gi|3256949|dbj|BAA29632| (AP000002) 318aa long hypothetical prot... 33 3.2
gi|3327124|dbj|BAA31630| (AB014555) KIAA0655 protein [Homo sapiens] 33 3.2
gi|136099|sp|P02561|TPMP_HORSE TROPOMYOSIN BETA CHAIN, PLATELET ... 33 3.2
gi|2496434|sp|P75159|Y438_MYCPN HYPOTHETICAL PROTEIN MG438 HOMOL... 33 3.2
gi|3452564|dbj|BAA32479| (AB007690) Vesl-2(delta 11) [Rattus nor... 33 3.2
gi|3721836|dbj|BAA33713| (AB013384) HIP3 [Homo sapiens] 33 3.2
gi|3845121 (AE001380) hypothetical protein [Plasmodium falciparum] 33 3.2
gi|4507651|oth|NP_003281|PTPM4 tropomyosin 4 >gi|136095|sp|P0722... 33 3.2
gi|136081|sp|P09495|TPM4_RAT TROPOMYOSIN 4, EMBRYONIC FIBROBLAST... 33 3.2
gi|127772|sp||MYSS_RABIT_2 [Segment 2 of 2] MYOSIN HEAVY CHAIN, ... 33 3.2
gi|3767594|dbj|BAA33857| (AB015195) Eprh [Staphylococcus aureus] 33 3.2
gi|3845250 (AE001411) ATP-dept. acyl-CoA synthetase (TP) [Plasmo... 33 3.2
gi|730978|sp|P40414|TPM2_YEAST TROPOMYOSIN 2 >gi|626957|pir||S48... 33 3.2
gi|4490753|emb|CAB38915| (AL035708) putative protein [Arabidopsi... 33 3.2
gi|90095|pir||S00084 myosin heavy chain, fast skeletal muscle - ... 33 3.2
gi|1216293 (L35239) cardiac tropomyosin [Xenopus laevis] 33 3.2
gi|1707140 (U80836) weak similarity to S. cerevisiae NUF1 (GI:84... 33 3.2
gi|3845128 (AE001381) hypothetical protein [Plasmodium falciparum] 33 3.2
gi|587474|emb|CAA55207| (X78450) membrane protein [Mycoplasma ho... 33 3.2
gi|1723492|sp|Q10411|YD86_SCHPO HYPOTHETICAL 222.8 KD PROTEIN C1... 33 3.2
gi|1408192 (U59294) myosin heavy chain [Placopecten magellanicus] 32 4.2
gi|1770742|emb|CAA69036| (Y07759) mysoin heavy chain 12 [Homo sa... 32 4.2
gi|3219972|sp|P81328|YE1A_METJA HYPOTHETICAL PROTEIN MJ1417.1 >g... 32 4.2
gi|3044185 (AF056936) mature parasite-infected erythrocyte surfa... 32 4.2
gi|1354363 (U52008) Enn50 [Streptococcus pyogenes] 32 4.2
gi|1572482 (U35816) nonmuscle myosin-II heavy chain [Drosophila ... 32 4.2
gi|1770741|emb|CAA69035| (Y07759) mysoin heavy chain 12 [Homo sa... 32 4.2
gi|4099880 (U90942) myosin heavy chain 12 [Homo sapiens] 32 4.2
gi|4154618 (AE001450) putative [Helicobacter pylori J99] 32 4.2
gi|454796 (U05574) antigen II/3 [Echinococcus granulosus] 32 4.2
gi|1078821|pir||S49143 EG10 protein - tapeworm (Echinococcus gra... 32 4.2
gi|3041708|sp|P13540|MYSB_MESAU MYOSIN HEAVY CHAIN, CARDIAC MUSC... 32 4.2
gi|2924770 (AC002334) putative myosin heavy chain [Arabidopsis t... 32 4.2
gi|102489|pir||S15795 vacuolar proton pump homolog - Caenorhabdi... 32 4.2
gi|267105|sp|Q01056|TEGU_HSVSA PROBABLE LARGE TEGUMENT PROTEIN >... 32 4.2
gi|547969|sp|Q99323|MYSN_DROME MYOSIN HEAVY CHAIN, NON-MUSCLE (Z... 32 4.2
gi|1352646|sp|P47326|OPPF_MYCGE OLIGOPEPTIDE TRANSPORT ATP-BINDI... 32 4.2
gi|1572480 (U35816) nonmuscle myosin-II heavy chain [Drosophila ... 32 4.2
gi|3041711|sp|Q05870|MYSP_SCHJA PARAMYOSIN (ANTIGEN SJ97) >gi|49... 32 4.2
gi|555805 (U11825) paramyosin [Schistosoma japonicum] 32 4.2
gi|1408194 (U59295) myosin heavy chain [Placopecten magellanicus] 32 4.2
gi|1617111|emb|CAA28300| (X04627) beta-myosin heavy chain [Homo ... 32 4.2
gi|4426593|gb|AAD20441| (AF063023) AF-6 [Caenorhabditis elegans] 32 4.2
gi|4522026|gb|AAD21789| (AC004886) C-terminus matches KIAA0559, ... 32 4.2
gi|2131997|pir||S66717 hypothetical protein YOL034w - yeast (Sac... 32 4.2
gi|1572481 (U35816) nonmuscle myosin-II heavy chain [Drosophila ... 32 4.2
gi|2119295|pir||S61477 myosin II heavy chain, non-muscle - fruit... 32 4.2
gi|4502409|oth|NP_001705|PBICD1 Bicaudal D (Drosophila) homolog ... 32 4.2
gi|157953 (M35012) non-muscle myosin heavy chain [Drosophila mel... 32 4.2
gi|476355|pir||A46762 myosin alpha heavy chain, cardiac muscle -... 32 4.2
gi|297024|emb|CAA79675| (Z20656) cardiac alpha-myosin heavy chai... 32 4.2
gi|191618 (M76598) alpha cardiac myosin heavy chain [Mus musculus] 32 4.2
gi|3024204|sp|Q02566|MYSA_MOUSE MYOSIN HEAVY CHAIN, CARDIAC MUSC... 32 4.2
gi|191622 (M76600) alpha cardiac myosin heavy chain [Mus musculus] 32 4.2
gi|127741|sp|P02563|MYSA_RAT MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ... 32 4.2
gi|3915779|sp|P13539|MYSA_MESAU MYOSIN HEAVY CHAIN, CARDIAC MUSC... 32 4.2
gi|1141790 (U35816) nonmuscle myosin-II heavy chain [Drosophila ... 32 4.2
gi|2196554|dbj|BAA20455| (AB004636) tropomyosin [Patinopecten ye... 32 4.2
gi|2661598|emb|CAA15711| (AL009196) 1-evidence=predicted by cont... 32 4.2
gi|3041706|sp|P13533|MYSA_HUMAN MYOSIN HEAVY CHAIN, CARDIAC MUSC... 32 4.2
gi|731152|sp|P30628|VPP1_CAEEL PUTATIVE CLATHRIN-COATED VESICLE/... 32 4.2
gi|2498458|sp|P75471|HMW2_MYCPN CYTADHERENCE HIGH MOLECULAR WEIG... 32 4.2
gi|2911873 (AF047662) contains similarity to C3HC4-type zinc fin... 32 5.6
gi|2632886|emb|CAB12392| (Z99107) similar to hypothetical protei... 32 5.6
gi|4493978|emb|CAB39037| (AL034559) predicted using hexExon; MAL... 32 5.6
gi|158836 (M59323) antigen [Echinococcus multilocularis] 32 5.6
gi|113451|sp|P09547|ADR6_YEAST TRANSCRIPTION REGULATORY PROTEIN ... 32 5.6
gi|3821987 (AF061147) merozoite surface protein 1 [Plasmodium fa... 32 5.6
gi|487104|pir||S39081 myosin heavy chain, adult - chicken (fragm... 32 5.6
gi|401010|sp|P32001|RPSD_BUCAP RNA POLYMERASE SIGMA FACTOR RPOD ... 32 5.6
gi|348450|pir||A45620 cytovillin homolog - tapeworm (Echinococcu... 32 5.6
gi|1495818|emb|CAA65728| (X97000) myosin-like protein [Taenia sa... 32 5.6
gi|2649013 (AE000995) A. fulgidus predicted coding region AF1557... 32 5.6
gi|3098266 (AF026198) mitosis-specific chromosome segregation pr... 32 5.6
gi|4220474 (AC006069) putative myosin heavy chain [Arabidopsis t... 32 5.6
gi|422888|pir||S32763 hypothetical protein, 160K - human >gi|296... 32 5.6
gi|1000405|bbs|168508 (S78540) myosin heavy chain, AMHC1 [chicke... 32 5.6
gi|1197337|emb|CAA64859| (X95601) Lmp4 protein [Mycoplasma hominis] 32 5.6
gi|1698895 (U75316) beta-myosin heavy chain [Sus scrofa] 32 5.6
gi|1945089|dbj|BAA19697| (D88802) membrane protein [Bacillus sub... 32 5.6
gi|2127599|pir||PC6003 surface membrane protein lmp4 - Mycoplasm... 32 5.6
gi|2147744|pir||I51302 myosin heavy chain - chicken (fragment) 32 5.6
gi|466061|sp|P34606|YO66_CAEEL HYPOTHETICAL 32.5 KD PROTEIN ZK10... 32 5.6
gi|114205|sp|P13050|ARP4_STRPY IGA RECEPTOR PRECURSOR >gi|80035|... 32 5.6
gi|86369|pir||S03166 myosin heavy chain, gizzard smooth muscle -... 32 5.6
gi|2119311|pir||I52966 myosin heavy chain 12 - human (fragment) ... 32 5.6
gi|2435621 (AF026215) No definition line found [Caenorhabditis e... 32 5.6
gi|3915778|sp|P10587|MYSG_CHICK MYOSIN HEAVY CHAIN, GIZZARD SMOO... 32 5.6
gi|4506751|oth|NP_002947|PRSN restin (Reed-Steinberg cell-expres... 32 5.6
gi|4185884|emb|CAA70581| (Y09430) Groovin [Drosophila melanogaster] 32 5.6
gi|915377 (U28154) orf12 [Haemophilus somnus] 32 5.6
gi|2496852|sp|Q11102|YL17_CAEEL HYPOTHETICAL 131.5 KD PROTEIN C0... 32 5.6
gi|1621107 (U62026) cardiac muscle factor 1 CMF1 [Gallus gallus] 32 5.6
gi|3123890 (AF031552) sensor kinase [Vibrio cholerae] 32 5.6
gi|3845242 (AE001409) hypothetical protein [Plasmodium falciparum] 32 5.6
gi|90239|pir||A28298 myosin heavy chain beta, cardiac muscle - g... 32 5.6
gi|4468777|emb|CAB38186| (AJ004935) cytoplasmic intermediate fil... 32 5.6
gi|420071|pir||A43336 microtubule-vesicle linker CLIP-170 - huma... 32 5.6
gi|309727 (M77730) major merozoite surface antigen [Plasmodium f... 32 7.3
gi|88933|pir||A24199 tropomyosin NM, skeletal muscle - human >gi... 32 7.3
gi|439846 (U04541) alpha-tropomyosin slow [Mus musculus] 32 7.3
gi|1334403|emb|CAA40768| (X57546) intron orf [Kluyveromyces lact... 32 7.3
gi|2496389|sp|Q49419|Y328_MYCGE HYPOTHETICAL PROTEIN MG328 >gi|1... 32 7.3
gi|438880 (L24776) tropomyosin [Rattus norvegicus] 32 7.3
gi|438882 (L24777) tropomyosin [Rattus norvegicus] 32 7.3
gi|2688482 (AE001157) B. burgdorferi predicted coding region BB0... 32 7.3
gi|114986|sp|P11709|BIK1_YEAST NUCLEAR FUSION PROTEIN BIK1 >gi|8... 32 7.3
gi|4210360|emb|CAA21070| (AL031683) dJ881E24.1.1 (1-Phosphatidyl... 32 7.3
gi|4574238|gb|AAD23963|AF106851_2 (AF106851) FmhC [Staphylococcu... 32 7.3
gi|127759|sp|P14105|MYSN_CHICK MYOSIN HEAVY CHAIN, NONMUSCLE (NM... 32 7.3
gi|3043686|dbj|BAA25507| (AB011153) KIAA0581 protein [Homo sapiens] 32 7.3
gi|3845248 (AE001410) hypothetical protein [Plasmodium falciparum] 32 7.3
gi|259166|bbs|117575 myosin short subfragment-2, CM-S-2 [chicken... 32 7.3
gi|439288|emb|CAA79923| (Z21877) heavy chain of cytoplasmic dyne... 32 7.3
gi|544197|sp|P36022|DYHC_YEAST DYNEIN HEAVY CHAIN, CYTOSOLIC (DY... 32 7.3
gi|3256520|dbj|BAA29203| (AP000001) 300aa long hypothetical prot... 32 7.3
gi|586540|sp|P38272|YBY0_YEAST HYPOTHETICAL 47.4 KD PROTEIN IN O... 32 7.3
gi|130223|sp|P10687|PIP1_RAT 1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSP... 32 7.3
gi|4210989 (AF121781) unknown [Homo sapiens] 32 7.3
gi|1351266|sp|P16154|TOXA_CLODI TOXIN A >gi|40441|emb|CAA36094| ... 32 7.3
gi|3915315|sp|Q29466|VPP1_BOVIN CLATHRIN-COATED VESICLE/SYNAPTIC... 32 7.3
gi|101144|pir||S17997 gene COX1 intron 3 protein - yeast (Kluyve... 32 7.3
gi|464482|sp|P33332|SEC3_YEAST EXOCYST COMPLEX COMPONENT SEC3 (P... 32 7.3
gi|139352|sp|P25286|VPP1_RAT CLATHRIN-COATED VESICLE/SYNAPTIC VE... 32 7.3
gi|1084193|pir||S52537 emm L 15 protein - Streptococcus pyogenes... 32 7.3
gi|1398903|dbj|BAA13044| (D86214) Ca2+ dependent activator prote... 32 7.3
gi|2370337|emb|CAA04656| (AJ001296) cytokeratin 8 [Notophthalmus... 32 7.3
gi|98593|pir||A37052 toxin A - Clostridium difficile >gi|144926 ... 32 7.3
gi|2621615 (AE000837) intracellular protein transport protein [M... 32 7.3
gi|3915316|sp|Q93050|VPP1_HUMAN CLATHRIN-COATED VESICLE/SYNAPTIC... 32 7.3
gi|2648520 (AE000963) A. fulgidus predicted coding region AF2031... 32 7.3
gi|3256672|dbj|BAA29355| (AP000001) 279aa long hypothetical prot... 32 7.3
gi|1362865|pir||A36881 MPM2-reactive phosphoprotein 1 - human (f... 32 7.3
gi|1263021 (U39838) M protein [Streptococcus pyogenes] 32 7.3
gi|4154552 (AE001444) putative [Helicobacter pylori J99] 32 7.3
gi|4493907|emb|CAB39016| (AL034558) predicted using hexExon; MAL... 32 7.3
gi|136085|sp|P06753|TPM3_HUMAN TROPOMYOSIN ALPHA CHAIN, SKELETAL... 32 7.3
gi|2832859|emb|CAA16814| (AL021728) 1-evidence=predicted by cont... 32 7.3
>gi|3982831 (AF083343) 101 kDa heat shock protein; HSP101 [Nicotiana tabacum]
Length = 907
Score = 243 bits (613), Expect = 2e-63
Identities = 129/296 (43%), Positives = 199/296 (66%), Gaps = 8/296 (2%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K+++K++E ++ K ILF+DE H ++ AG + EGS+D N+ KP LA
Sbjct: 247 AGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANLFKPMLAR 305
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++CIGATT EYRKY+E D A RRF ++ V EP+++D I+ILRGL+ER+E HHGVKI
Sbjct: 306 GQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTISILRGLKERYEGHHGVKI 365
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
D ALV A + S +YI+ R LPD AIDLVD AC++ V L+++ + + L+ + +E+E
Sbjct: 366 QDRALVVAAQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVE 425
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+ A+ E+EK AR+ +++ L++L+++L PL Y +EK+ I EL+ LKQK ++
Sbjct: 426 LHAL----EKEKDKASKARLIEVRKELDDLRDKLQPLMMRYKKEKERIDELRRLKQKRDE 481
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKA-------VVTSKDIAEIISR 14
L +AE+ D A ++++ + + I+ LES A V IAE++SR
Sbjct: 482 LIYALQEAERRYDLARAADLRYGAIQEVETAIANLESTSAESTMLTETVGPDQIAEVVSR 541
Query: 13 LTRI 2
T I
Sbjct: 542 WTGI 545
>gi|1170149|sp|P42730|H101_ARATH HEAT SHOCK PROTEIN 101 >gi|537446 (U13949) AtHSP101 [Arabidopsis
thaliana]
Length = 911
Score = 241 bits (608), Expect = 6e-63
Identities = 126/296 (42%), Positives = 198/296 (66%), Gaps = 9/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER KS++K++E ++ K ILF+DE H ++ AG EGS+D N+ KP LA
Sbjct: 248 AGAKYRGEFEERLKSVLKEVEDAEGKVILFIDEIHLVLGAG-KTEGSMDAANLFKPMLAR 306
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++CIGATT EYRKY+E D A RRF ++ V EP++ D I+ILRGL+E++E HHGV+I
Sbjct: 307 GQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVPDTISILRGLKEKYEGHHGVRI 366
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
D AL+ A + S +YI+ R LPD AIDLVD AC++ V L+++ + + L+ + +E+E
Sbjct: 367 QDRALINAAQLSARYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEIE 426
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+ A+ EREK AR+ +++ L++L+++L PL Y +EK+ I E++ LKQK E+
Sbjct: 427 LHAL----EREKDKASKARLIEVRKELDDLRDKLQPLTMKYRKEKERIDEIRRLKQKREE 482
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAV--------VTSKDIAEIIS 17
L +AE+ D A ++++ + + I++LE + V + IAE++S
Sbjct: 483 LMFSLQEAERRYDLARAADLRYGAIQEVESAIAQLEGTSSEENVMLTENVGPEHIAEVVS 542
Query: 16 RLTRI 2
R T I
Sbjct: 543 RWTGI 547
>gi|4558484|gb|AAD22629|AF097363_1 (AF097363) heat shock protein 101 [Triticum aestivum]
Length = 918
Score = 238 bits (602), Expect = 3e-62
Identities = 125/296 (42%), Positives = 198/296 (66%), Gaps = 8/296 (2%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K+++K++E ++ K ILF+DE H ++ AG + EGS+D N+ KP LA
Sbjct: 251 AGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANLFKPMLAR 309
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++CIGATT EYRKY+E D A RRF ++ V EP+++D I+ILRGL+E++E HHGV+I
Sbjct: 310 GQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTISILRGLKEKYEGHHGVRI 369
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
D A+V A + S +YI R LPD AIDLVD AC++ V L+++ + + L+ + +E+E
Sbjct: 370 QDRAIVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVE 429
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+ A+ E+EK AR+ +++ L++L+++L PL Y +EK+ I E++ LKQ+ E+
Sbjct: 430 LHAL----EKEKDKASKARLVEVRKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQRREE 485
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES-------IKAVVTSKDIAEIISR 14
L +AE+ D ++K+ L I I++LE + V + IAE++SR
Sbjct: 486 LQFTLQEAERRMDLARVADLKYGALQEIDAAIAKLEGETGENLMLTETVGPEQIAEVVSR 545
Query: 13 LTRI 2
T I
Sbjct: 546 WTGI 549
>gi|530207 (L35272) heat shock protein [Glycine max]
Length = 911
Score = 238 bits (601), Expect = 4e-62
Identities = 124/296 (41%), Positives = 198/296 (66%), Gaps = 8/296 (2%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K+++K++E ++ K ILF+DE H ++ AG + EGS+D N+ KP LA
Sbjct: 249 AGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRT-EGSMDAANLFKPMLAR 307
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++CIGATT EYRKY+E D A RRF ++ V EP++ D I+ILRGL+ER+E HHGV+I
Sbjct: 308 GQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVVDTISILRGLKERYEGHHGVRI 367
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
D ALV A + S +YI+ R LPD AIDLVD AC++ V L+++ + + L+ + +E+E
Sbjct: 368 QDRALVMAAQLSNRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRMQLEVE 427
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+ A+ E+EK AR+ +++ L++L+++L PL Y +EK+ + E++ LK+K E+
Sbjct: 428 LHAL----EKEKDKASKARLVEVRKELDDLRDKLQPLMMKYRKEKERVDEIRRLKKKREE 483
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES-------IKAVVTSKDIAEIISR 14
L +AE+ D A ++++ + + I +LE + V + IAE++SR
Sbjct: 484 LLFALQEAERRYDLARAADLRYGAIQEVETAIQQLEGSTEENLMLTETVGPEQIAEVVSR 543
Query: 13 LTRI 2
T I
Sbjct: 544 WTGI 547
>gi|3982833 (AF083344) 101 kDa heat shock protein; HSP101 [Triticum aestivum]
Length = 911
Score = 235 bits (593), Expect = 3e-61
Identities = 125/296 (42%), Positives = 198/296 (66%), Gaps = 9/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPS-LA 716
+ +YRG+FEER K+++K++E +D K ILF+DE H ++ AG + EGS+D N+ KP LA
Sbjct: 252 AGAKYRGEFEERLKAVLKEVEEADGKVILFIDEIHLVLGAGRT-EGSMDAANLFKPPMLA 310
Query: 715 SGKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVK 536
G+++CIGATT EYRKY+E D A RRF ++ V EP+++D I+ILRGL+E++E HHGV+
Sbjct: 311 RGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSVADTISILRGLKEKYEGHHGVR 370
Query: 535 ISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVEL 356
I D A+V A + S +YI R LPD AIDLVD AC++ V L+++ + + L+ + +E+
Sbjct: 371 IQDRAIVVAAQLSARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKRIQLEV 430
Query: 355 EIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
E+ A+ E+EK AR+ +++ L++L+++L PL Y +EK+ I E++ LKQ+ E
Sbjct: 431 ELHAL----EKEKDKASKARLVEVRKELDDLRDKLQPLTMKYRKEKERIDEIRKLKQRRE 486
Query: 175 KYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES-------IKAVVTSKDIAEIIS 17
+ L +AE+ +D ++K+ L I I+ +E + V + IAE++S
Sbjct: 487 ELQFTLQEAERRKDLARVADLKYGALQEIDAAIANVEGETGENLMLTETVGPEQIAEVVS 546
Query: 16 RLTRI 2
R T I
Sbjct: 547 RWTGI 551
>gi|4481954|emb|CAB38512| (AL035637) putative protease subunit; chaperonin [Schizosaccharomyces
pombe]
Length = 905
Score = 234 bits (591), Expect = 6e-61
Identities = 123/287 (42%), Positives = 185/287 (63%), Gaps = 1/287 (0%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +++RG+FEER KS++K++E S+ ILFVDE H ++ AG+ EG +D N+LKP LA
Sbjct: 250 AGSKFRGEFEERIKSVLKEVEESETPIILFVDEMHLLMGAGSGGEGGMDAANLLKPMLAR 309
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
GK+ CIGATT EY+KYIE D A RRF I V EP+I D I+ILRGL+E++E HHGV I
Sbjct: 310 GKLHCIGATTLAEYKKYIEKDAAFERRFQIILVKEPSIEDTISILRGLKEKYEVHHGVTI 369
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
SD ALV A + +Y+++RRLPD AIDLVD A ++ V E++ + + L+ ++ + +E
Sbjct: 370 SDRALVTAAHLASRYLTSRRLPDSAIDLVDEAAAAVRVTRESQPEVLDNLERKLRQLRVE 429
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
I+A+ EREK + R+ + E ++ E P+ E Y EK +EL++ K++L++
Sbjct: 430 IRAL----EREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRLDE 485
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDIA 29
K DAE+ D A ++K+ +P + K+I LE K ++ IA
Sbjct: 486 LKAKAEDAERRNDFTLAADLKYYGIPDLQKRIEYLEQQKRKADAEAIA 533
>gi|2058336|emb|CAB08073| (Z94053) heat shock protein 100 [Leishmania donovani]
Length = 867
Score = 231 bits (584), Expect = 4e-60
Identities = 123/296 (41%), Positives = 197/296 (66%), Gaps = 10/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQI-ESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K+++ ++ ESD+K ILF+DE H ++ AG S +G++D N+LKP LA
Sbjct: 246 AGAKYRGEFEERLKAVLNEVKESDNKIILFIDEIHLVLGAGKS-DGAMDAANLLKPLLAR 304
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++ IGATT EYR+Y+E D A RRF+ + V EP++ + +ILRGL++R+E HHGV+I
Sbjct: 305 GELRTIGATTLEEYRQYVEKDAAFERRFMPVQVNEPSVEECTSILRGLKDRYEQHHGVQI 364
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
+D A+V A + + +YI+NR LPD AIDL+D AC++ V L + + L+ + +E+E
Sbjct: 365 TDKAVVVAAQLAGRYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQLEIE 424
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
KA+ +R+K R+ +K ++ ++ +L PL Y +E+ I EL+ + KL++
Sbjct: 425 EKAL----QRDKDASAKERLKAVKAEIQKVEEKLGPLLAKYEQERGRIDELQATQAKLDE 480
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKI----SELESIKA-----VVTSKDIAEII 20
KL AE++RD TA ++K+ ++P + +I E+E KA VT DIA ++
Sbjct: 481 KKVKLERAERMRDMETAADLKYNVIPILQDRIRSLKEEIEKQKATMLHGTVTETDIATVV 540
Query: 19 SRLTRI 2
SR T I
Sbjct: 541 SRWTNI 546
>gi|3560150|emb|CAA20737| (AL031534) Chaperonin hsp78p [Schizosaccharomyces pombe]
Length = 803
Score = 230 bits (580), Expect = 1e-59
Identities = 128/296 (43%), Positives = 196/296 (65%), Gaps = 11/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
S ++RG FEER KS++ +E ++ K ILFVDE H ++ G + EGS+D +N+LKP+LA
Sbjct: 180 SGAKFRGDFEERLKSVLSDLEGAEGKVILFVDEMHLLLGFGKA-EGSIDASNLLKPALAR 238
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
GK+ C GATT EYRKYIE D ALARRF + V EP+++D I+ILRGL+ER+E HHGV+I
Sbjct: 239 GKLHCCGATTLEEYRKYIEKDAALARRFQAVMVNEPSVADTISILRGLKERYEVHHGVRI 298
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
+DDALV A S +YI++R LPD AIDLVD ACSS + E++ + L Q+ ++++E
Sbjct: 299 TDDALVTAATYSARYITDRFLPDKAIDLVDEACSSLRLQQESKPDELRRLDRQIMTIQIE 358
Query: 352 IKAIEIDYEREKTDILAA-RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
++++ R++TD + R L+ L +LK E L ++ EE+K + +K K +LE
Sbjct: 359 LESL-----RKETDTTSVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELE 413
Query: 175 KYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES---------IKAVVTSKDIAEI 23
+ +L ++ ++ A E+++ I+P + + + + E + VTS DIA +
Sbjct: 414 QARIELERTQREGNYARASELQYAIIPELERSVPKEEKTLEEKKPSMVHDSVTSDDIAVV 473
Query: 22 ISRLTRI 2
+SR T I
Sbjct: 474 VSRATGI 480
>gi|1946209|emb|CAA86116| (Z38058) 100 kDa heat shock protein (Hsp100) [Leishmania major]
Length = 867
Score = 226 bits (571), Expect = 1e-58
Identities = 118/296 (39%), Positives = 194/296 (64%), Gaps = 10/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQI-ESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K+++ ++ ESD+K ILF+ E H ++ AG S +G++D N+LKP LA
Sbjct: 246 AGAKYRGEFEERLKAVLNEVKESDNKIILFIVEIHLVLGAGKS-DGAMDAANLLKPLLAR 304
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G ++ IGATT EYR+Y+E D A RRF+ + V EP++ + +ILRGL++R+E HHGV+I
Sbjct: 305 GDVRTIGATTLEEYRQYVEKDAAFERRFMPVQVHEPSVEECTSILRGLKDRYEQHHGVQI 364
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
+D A+V A + + +YI+NR LPD AIDL+D AC++ V L + + L+ + +E+E
Sbjct: 365 TDKAVVVAAQLAGRYITNRFLPDKAIDLIDEACANVRVTLSSRPAEIDALERKKRQLEIE 424
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+A+ +R+K R+ +K ++ ++ +L PL Y +E+ I EL+ + KL++
Sbjct: 425 ERAL----QRDKDASAKERLKAVKAEIQKVEEKLGPLLAKYEQERGRIDELQATQAKLDE 480
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES---------IKAVVTSKDIAEII 20
KL AE++RD TA ++K+ ++P + +I L+ ++ VT DIA ++
Sbjct: 481 KKVKLERAERMRDMETAADLKYRVIPILQDRIRSLKEAIEKQKATMLQGTVTGTDIATVV 540
Query: 19 SRLTRI 2
SR T I
Sbjct: 541 SRWTNI 546
>gi|3860606|emb|CAA14507| (AJ235270) CLPB PROTEIN (clpB) [Rickettsia prowazekii]
Length = 858
Score = 225 bits (568), Expect = 3e-58
Identities = 121/296 (40%), Positives = 191/296 (63%), Gaps = 7/296 (2%)
Query: 889 SNTQYRGQFEERFKSLVKQI-ESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ QYRG+FE+R K+++ +I ES + ILF+DE H +V G +G++D +N+LKP LA
Sbjct: 248 AGAQYRGEFEKRLKAVLSEIKESSGEIILFIDELHLLVGTG-KVDGAMDASNLLKPMLAR 306
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G++ CIGATT EYRKYIE D ALARRF + V EP++ D I+ILRG++E++E HH V+I
Sbjct: 307 GELHCIGATTLDEYRKYIEKDAALARRFQPVYVGEPSVEDTISILRGIKEKYELHHAVRI 366
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
SD A+V A S +YI++R LPD AIDL+D ACS + L ++ + + L ++ +++E
Sbjct: 367 SDSAIVAAATLSNRYITDRYLPDKAIDLIDEACSRMKIELSSKPEELDELDRRIIQIKIE 426
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+ A+ ++E + +I L L+ L+++ + + EK + + + LK++LE+
Sbjct: 427 LAAL----KKENDEHSKKKITSLTEELKKLESKSYDMNTKWQAEKSKLQQAQKLKEELEQ 482
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES------IKAVVTSKDIAEIISRL 11
L AE+ + A E+K+ I+P I K+ E E+ +K +V+ DIA IISR+
Sbjct: 483 ARIDLERAERDANLAKASELKYGIIPEIMNKLQEAENMDNKGLLKEIVSESDIASIISRI 542
Query: 10 TRI 2
T I
Sbjct: 543 TGI 545
>gi|145053 (M32229) ATP-dependent protease [Dichelobacter nodosus]
Length = 731
Score = 224 bits (566), Expect = 5e-58
Identities = 131/296 (44%), Positives = 194/296 (65%), Gaps = 10/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQI-ESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ T+YRG+FEER K+++ +I ++D + ILF+DE HTMV AG S EGSLD NMLKP+LA
Sbjct: 248 AGTKYRGEFEERLKAVLDEITKADGQIILFIDEIHTMVGAGKS-EGSLDAGNMLKPALAR 306
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G + CIGATT EYR+Y+E D AL RRF K+ V EP++ D I ILR L+ER+E HHG+ I
Sbjct: 307 GDLHCIGATTLDEYRQYMEKDAALERRFQKVIVDEPSVEDTIAILRNLQERYEVHHGINI 366
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
+D ALV A + S +YIS R+LPD AIDL+D A +A + +E +S+P M K ++L+
Sbjct: 367 TDPALVAAAQLSHRYISGRKLPDKAIDLMDEA--AAQIRMELDSKPEVMDKIDRRLIQLQ 424
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
I+ + + E+E R++DL+ + + E LEE + EK +K++L+K
Sbjct: 425 IERMAL--EKETDAASKRRLSDLEAEIAAQEKEYADLEEIWLAEKAGNAGAAEIKEQLDK 482
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES---------IKAVVTSKDIAEII 20
+L A++ D A EI++ ++P K++ E E ++ VT+++IAEI+
Sbjct: 483 LRVELEAAKRRGDFARASEIQYGLIPAKEKQLLENEQQTEQRPHRLMRNKVTAEEIAEIV 542
Query: 19 SRLTRI 2
SR T I
Sbjct: 543 SRWTGI 548
>gi|399265|sp|P17422|CLPB_BACNO CLPB PROTEIN >gi|97341|pir||C35905 ATP-dependent Clp proteinase (EC
3.4.21.-) regulatory chain B - Dichelobacter nodosus
Length = 860
Score = 224 bits (566), Expect = 5e-58
Identities = 131/296 (44%), Positives = 194/296 (65%), Gaps = 10/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQI-ESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ T+YRG+FEER K+++ +I ++D + ILF+DE HTMV AG S EGSLD NMLKP+LA
Sbjct: 251 AGTKYRGEFEERLKAVLDEITKADGQIILFIDEIHTMVGAGKS-EGSLDAGNMLKPALAR 309
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G + CIGATT EYR+Y+E D AL RRF K+ V EP++ D I ILR L+ER+E HHG+ I
Sbjct: 310 GDLHCIGATTLDEYRQYMEKDAALERRFQKVIVDEPSVEDTIAILRNLQERYEVHHGINI 369
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
+D ALV A + S +YIS R+LPD AIDL+D A +A + +E +S+P M K ++L+
Sbjct: 370 TDPALVAAAQLSHRYISGRKLPDKAIDLMDEA--AAQIRMELDSKPEVMDKIDRRLIQLQ 427
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
I+ + + E+E R++DL+ + + E LEE + EK +K++L+K
Sbjct: 428 IERMAL--EKETDAASKRRLSDLEAEIAAQEKEYADLEEIWLAEKAGNAGAAEIKEQLDK 485
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES---------IKAVVTSKDIAEII 20
+L A++ D A EI++ ++P K++ E E ++ VT+++IAEI+
Sbjct: 486 LRVELEAAKRRGDFARASEIQYGLIPAKEKQLLENEQQTEQRPHRLMRNKVTAEEIAEIV 545
Query: 19 SRLTRI 2
SR T I
Sbjct: 546 SRWTGI 551
>gi|3360502 (AF061279) heat shock protein [Plectonema boryanum]
Length = 883
Score = 223 bits (563), Expect = 1e-57
Identities = 124/296 (41%), Positives = 194/296 (64%), Gaps = 13/296 (4%)
Query: 889 SNTQYRGQFEERFKSLVKQI-ESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K+++K++ +S ILF+DE HT+V AGA+ +G++D N+LKP LA
Sbjct: 260 AGAKYRGEFEERLKAVLKEVTDSRGNIILFIDEIHTVVGAGAT-QGAMDAGNLLKPMLAR 318
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++CIGATT EYRKYIE D AL RRF ++ V +P++ D I+ILRGL+ER+E HHGVKI
Sbjct: 319 GELRCIGATTLDEYRKYIEKDAALERRFQQVFVDQPSVEDTISILRGLKERYEVHHGVKI 378
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
SD ALV A S +YIS+R LP AIDLVD A + + + ++ + + + ++ +E+E
Sbjct: 379 SDSALVAAATLSTRYISDRFLPSKAIDLVDEAAAKLKMEITSKPEELDEVDRKVLQLEME 438
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+++ + + D R+ L+ L + K + L + EK IT+L+ LK+++++
Sbjct: 439 RLSLQKENDAGSRD----RLERLERELADFKEDQSKLNAQWQAEKSVITDLQKLKEEIDR 494
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES------------IKAVVTSKDIA 29
N ++ AE+ D A E+K+ L +++K+ E ES ++ V DIA
Sbjct: 495 VNLEIQQAERDYDLNRAAELKYGKLNELNRKVEETESQLSQIQKSGATLLREEVLESDIA 554
Query: 28 EIISRLTRI 2
EIIS+ T I
Sbjct: 555 EIISKWTGI 563
>gi|102073|pir||E35905 ATP-dependent Clp proteinase (EC 3.4.21.-) regulatory chain B -
Trypanosoma brucei
Length = 862
Score = 221 bits (558), Expect = 4e-57
Identities = 117/296 (39%), Positives = 195/296 (65%), Gaps = 10/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQI-ESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ + RG+FEER KS++ ++ ES + ILF+DE H ++ AG S GS+D N+LKP LA
Sbjct: 239 AGSSLRGEFEERLKSVLNEVKESSNGVILFIDEIHLVLGAGKSG-GSMDAANLLKPMLAR 297
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++ IGATT EYR Y+E D A RRF+ + V EP++ + I+ILRGL++R+EAHHGV+I
Sbjct: 298 GELRTIGATTLEEYRTYVEKDAAFERRFMPVYVTEPSVEECISILRGLKDRYEAHHGVQI 357
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
+D+A+V A + + +YI+NR +PD AIDL+D AC++ V L + + + +L+ + +E+E
Sbjct: 358 TDNAVVVAAQLANRYITNRFMPDKAIDLIDEACANVRVQLSSRPEAIDILERKKRQLEIE 417
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
KA+E D E + R+ +K ++ ++ EL PL YN+E++ I EL+ ++ +L++
Sbjct: 418 AKALERDKEAASRE----RLKLVKADIQRVEEELQPLVSKYNDERQRIDELQEMQSRLDE 473
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES---------IKAVVTSKDIAEII 20
KKL A + A ++++ ++P I +I L+ ++ VT D+A ++
Sbjct: 474 -KKKLERAVRDGKMDLAADLQYNVIPLIQDRIRSLKEDIERQKATLVQEKVTEGDVAAVV 532
Query: 19 SRLTRI 2
+R T I
Sbjct: 533 ARWTGI 538
>gi|399266|sp|P31543|CLP_TRYBB HEAT SHOCK PROTEIN 100 (CLP PROTEIN) >gi|162025 (M92325) Clp protein
[Trypanosoma brucei] >gi|2408130|emb|CAA03906| (AJ000080)
heat shock protein 100 [Trypanosoma brucei]
Length = 868
Score = 221 bits (558), Expect = 4e-57
Identities = 117/296 (39%), Positives = 195/296 (65%), Gaps = 10/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQI-ESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ + RG+FEER KS++ ++ ES + ILF+DE H ++ AG S GS+D N+LKP LA
Sbjct: 245 AGSSLRGEFEERLKSVLNEVKESSNGVILFIDEIHLVLGAGKSG-GSMDAANLLKPMLAR 303
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++ IGATT EYR Y+E D A RRF+ + V EP++ + I+ILRGL++R+EAHHGV+I
Sbjct: 304 GELRTIGATTLEEYRTYVEKDAAFERRFMPVYVTEPSVEECISILRGLKDRYEAHHGVQI 363
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
+D+A+V A + + +YI+NR +PD AIDL+D AC++ V L + + + +L+ + +E+E
Sbjct: 364 TDNAVVVAAQLANRYITNRFMPDKAIDLIDEACANVRVQLSSRPEAIDILERKKRQLEIE 423
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
KA+E D E + R+ +K ++ ++ EL PL YN+E++ I EL+ ++ +L++
Sbjct: 424 AKALERDKEAASRE----RLKLVKADIQRVEEELQPLVSKYNDERQRIDELQEMQSRLDE 479
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES---------IKAVVTSKDIAEII 20
KKL A + A ++++ ++P I +I L+ ++ VT D+A ++
Sbjct: 480 -KKKLERAVRDGKMDLAADLQYNVIPLIQDRIRSLKEDIERQKATLVQEKVTEGDVAAVV 538
Query: 19 SRLTRI 2
+R T I
Sbjct: 539 ARWTGI 544
>gi|1168973|sp|P44403|CLPB_HAEIN CLPB PROTEIN >gi|1073890|pir||F64098 ATP-dependent Clp proteinase
regulatory chain B (clpB) homolog - Haemophilus
influenzae (strain Rd KW20) >gi|1573874 (U32767)
ATP-dependent Clp protease, ATPase subunit (clpB)
[Haemophilus influenzae Rd]
Length = 856
Score = 221 bits (558), Expect = 4e-57
Identities = 117/296 (39%), Positives = 196/296 (65%), Gaps = 9/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDD-KSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K+++ ++ ++ + ILF+DE HTMV AG + +G++D N+LKPSLA
Sbjct: 247 AGAKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKT-DGAMDAGNLLKPSLAR 305
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G++ C+GATT EYR+YIE D AL RRF K+ V EP++ D I ILRGL+ER+E HH V I
Sbjct: 306 GELHCVGATTLDEYRQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDI 365
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
+D A+V A S +YIS+R+LPD AIDL+D A SS + ++++ +P+ L+ ++ ++LE
Sbjct: 366 TDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLE 425
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+A+ ++E+ + R+ L+ L + E LEE + EK ++ +++KQ+L+
Sbjct: 426 QQAL----QKEEDEASRKRLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDT 481
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES--------IKAVVTSKDIAEIIS 17
+L A + D E+++ +P + K++ + E+ ++ VT ++IAE++S
Sbjct: 482 AKTELEQARRAGDLAKMSELQYGRIPDLEKQLEQAETSEGKEMTLLRYRVTDEEIAEVLS 541
Query: 16 RLTRI 2
+ T I
Sbjct: 542 KATGI 546
>gi|2493732|sp|P71404|CLPB_HELPY CLPB PROTEIN >gi|2313356|gb|AAD07330.1| (AE000545) ATP-dependent
protease binding subunit (clpB) [Helicobacter pylori
26695]
Length = 856
Score = 220 bits (554), Expect = 1e-56
Identities = 119/296 (40%), Positives = 186/296 (62%), Gaps = 11/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ +YRG+FEER K ++++++ ILF+DE HT+V AGAS EG +D N+LKP+LA G
Sbjct: 245 AGAKYRGEFEERLKKVIEEVKKSANVILFIDEIHTIVGAGAS-EGGMDAANILKPALARG 303
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
++ IGATT EYRKY E D AL RRF I + EP+I++ + ILRGL+E E HH + I+
Sbjct: 304 ELHTIGATTLKEYRKYFEKDMALQRRFQPILLNEPSINEALQILRGLKETLETHHNITIN 363
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
D AL+ + K S +YI++R LPD AIDL+D + + +E+E ++ +K + +E+E
Sbjct: 364 DSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKMQMESEPAKLSSVKRSIQRLEMEK 423
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKY 170
+A+E+ EK + A R+ ++ L +LK E I LE + EK+ E+ LK ++E
Sbjct: 424 QALEM----EKKESNAKRMQEILKELSDLKEEKIQLEAQFENEKEVFKEISRLKMEMESL 479
Query: 169 NKKLADAEKVRDHYTALEIKHEILPHIHKKISELES-----------IKAVVTSKDIAEI 23
K+ ++ D+ A EI++ +P KK EL+ ++ +T +IAEI
Sbjct: 480 KKEAERFKRNGDYQQAGEIEYSKIPENKKKEEELQRKWEAMQQNGALLQNALTENNIAEI 539
Query: 22 ISRLTRI 2
+S+ T I
Sbjct: 540 VSQWTHI 546
>gi|2493734|sp|P74361|CLPB_SYNY3 CLPB PROTEIN >gi|1653543|dbj|BAA18456| (D90914) ClpB [Synechocystis
sp.]
Length = 872
Score = 219 bits (553), Expect = 2e-56
Identities = 120/296 (40%), Positives = 190/296 (63%), Gaps = 13/296 (4%)
Query: 889 SNTQYRGQFEERFKSLVKQI-ESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K+++K++ +S + ILF+DE HT+V AGA+ +G++D N+LKP LA
Sbjct: 249 AGAKYRGEFEERLKAVLKEVTDSQGQIILFIDEIHTVVGAGAT-QGAMDAGNLLKPMLAR 307
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G ++CIGATT EYRKYIE D AL RRF ++ V EP + D I+ILRGL+ER+E HHGVKI
Sbjct: 308 GALRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVLDTISILRGLKERYEVHHGVKI 367
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
+D ALV A S +YIS+R LPD AIDLVD A + + + ++ + + + ++ +E+E
Sbjct: 368 ADSALVAAAMLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEVDRKILQLEME 427
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+ +RE R+ L+ L + K E L + EK I +++ +K+ +++
Sbjct: 428 ----RLSLQRENDSASKERLEKLEKELADFKEEQSKLNGQWQSEKTVIDQIRTVKETIDQ 483
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES------------IKAVVTSKDIA 29
N ++ A++ D+ A E+++ L + +++ LE+ ++ V DIA
Sbjct: 484 VNLEIQQAQRDYDYNKAAELQYGKLTDLQRQVEALETQLAEQQTSGKSLLREEVLESDIA 543
Query: 28 EIISRLTRI 2
EIIS+ T I
Sbjct: 544 EIISKWTGI 552
>gi|1563721|emb|CAA69406| (Y08238) heat shock protein [Helicobacter pylori]
Length = 856
Score = 218 bits (549), Expect = 5e-56
Identities = 118/296 (39%), Positives = 185/296 (61%), Gaps = 11/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ +YRG+FEER K ++++++ ILF+DE HT+V AGAS EG +D N+LKP+LA G
Sbjct: 245 AGAKYRGEFEERLKKVIEEVKKSANVILFIDEIHTIVGAGAS-EGGMDAANILKPALARG 303
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
++ IGATT EYRKY E D AL RRF I + EP+I++ + ILRGL+E E HH + I+
Sbjct: 304 ELHTIGATTLKEYRKYFEKDMALQRRFQPILLNEPSINEALQILRGLKETLETHHNITIN 363
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
D AL+ + K S +YI++R LPD AIDL+D + + +E+E ++ +K + +E+E
Sbjct: 364 DSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKMQMESEPAKLSSVKRSIQRLEMEK 423
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKY 170
+A+E+ EK + R+ ++ L +LK E I LE + EK+ E+ LK ++E
Sbjct: 424 QALEM----EKKESNHKRMQEILKELSDLKEEKIQLEAQFENEKEAFKEISRLKMEMESL 479
Query: 169 NKKLADAEKVRDHYTALEIKHEILPHIHKKISELES-----------IKAVVTSKDIAEI 23
K+ ++ D+ A EI++ +P KK EL+ ++ +T +IAEI
Sbjct: 480 KKEAERFKRNGDYQQAGEIEYSKIPENKKKEEELQRKWEAMQQNGALLQNALTENNIAEI 539
Query: 22 ISRLTRI 2
+S+ T I
Sbjct: 540 VSQWTHI 546
>gi|4127451|emb|CAA11856| (AJ224159) clpB [Bacillus anthracis]
Length = 409
Score = 218 bits (549), Expect = 5e-56
Identities = 126/296 (42%), Positives = 193/296 (64%), Gaps = 12/296 (4%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ ++RG+FEER ++++ +I+ S+ + +LF+DE HT+V AG + EG++D NMLKP LA
Sbjct: 39 AGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKT-EGAMDAGNMLKPMLAR 97
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G++ CIGATT EYRKYIE D AL RRF ++ EPT+ D I+ILRGL+ERFE +HGV I
Sbjct: 98 GELHCIGATTLDEYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNI 157
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
D A+V A S +YIS+R LPD AIDLVD AC A + E +S P + + ++LE
Sbjct: 158 HDRAIVAASVLSDRYISDRFLPDKAIDLVDEAC--ATIRTEIDSMPTELDEVTRRIMQLE 215
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
I+ E +EK R+ L+ L +LK + + +EK++I ++++L++ LE+
Sbjct: 216 IE--EAALGKEKDFGSQERLKTLQRELSDLKEVASSMRAKWEKEKEDIHKVRDLREHLER 273
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES-----------IKAVVTSKDIAE 26
++L +AE D A E++H +P I K++ E E ++ V+ ++IA+
Sbjct: 274 LRRELEEAEGNYDLNRAAELRHGKIPAIEKELKEAEEMGANNKQENRLLREEVSEEEIAD 333
Query: 25 IISRLTRI 2
I+SR T I
Sbjct: 334 IVSRWTGI 341
>gi|2244823|emb|CAB10246| (Z97336) heat shock protein [Arabidopsis thaliana]
Length = 831
Score = 217 bits (546), Expect = 1e-55
Identities = 121/296 (40%), Positives = 191/296 (63%), Gaps = 9/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ T RGQFEER KS++K +E + K +LF+DE H + A ++ GS D +LKP LA
Sbjct: 213 AGTTLRGQFEERLKSVLKAVEEAQGKVVLFIDEIHMALGACKAS-GSTDAAKLLKPMLAR 271
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++ IGATT EYR ++E D A RRF ++ V EP++ D I+ILRGL+E++E HHGV+I
Sbjct: 272 GQLRFIGATTLEEYRTHVEKDAAFERRFQQVFVAEPSVPDTISILRGLKEKYEGHHGVRI 331
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
D ALV + + S++YI+ RRLPD AIDLVD +C+ L+ + + + L+ ++ +E+E
Sbjct: 332 QDRALVLSAQLSERYITGRRLPDKAIDLVDESCAHVKAQLDIQPEEIDSLERKVMQLEIE 391
Query: 352 IKAIEIDYEREKTDILA-ARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
I A+ E+EK D + AR+++++ L++L+++L PL Y +EKK I E + LKQ +
Sbjct: 392 IHAL----EKEKDDKASEARLSEVRKELDDLRDKLEPLTIKYKKEKKIINETRRLKQNRD 447
Query: 175 KYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES-------IKAVVTSKDIAEIIS 17
L +AE+ D A +K+ + + I++LE + V ++IAE++S
Sbjct: 448 DLMIALQEAERQHDVPKAAVLKYGAIQEVESAIAKLEKSAKDNVMLTETVGPENIAEVVS 507
Query: 16 RLTRI 2
R T I
Sbjct: 508 RWTGI 512
>gi|4154766 (AE001462) HEAT SHOCK PROTEIN [Helicobacter pylori J99]
Length = 856
Score = 216 bits (545), Expect = 1e-55
Identities = 117/296 (39%), Positives = 184/296 (61%), Gaps = 11/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ +YRG+FEER K ++++++ ILF+DE HT+V AGAS EG +D N+LKP+LA G
Sbjct: 245 AGAKYRGEFEERLKKVIEEVKKSANVILFIDEIHTIVGAGAS-EGGMDAANILKPALARG 303
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
++ IGATT EYRKY E D AL RRF I + EP+I++ + ILRGL+E E HH + I+
Sbjct: 304 ELHTIGATTLKEYRKYFEKDMALQRRFQPILLNEPSINEALQILRGLKETLETHHNITIN 363
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
D AL+ + K S +YI++R LPD AIDL+D + + +E+E ++ +K + +E+E
Sbjct: 364 DSALIASAKLSSRYITDRFLPDKAIDLIDEGAAQLKMQMESEPAKLSSVKRSIQRLEMEK 423
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKY 170
+A+E+ E + R+ ++ L +LK E I LE + EK+ E+ LK ++E
Sbjct: 424 QALEM----ENKESNHKRMQEILKELSDLKEEKIQLEAQFENEKEVFKEISRLKMEMEGL 479
Query: 169 NKKLADAEKVRDHYTALEIKHEILPHIHKKISELES-----------IKAVVTSKDIAEI 23
K+ ++ D+ A EI++ +P KK EL+ ++ +T +IAEI
Sbjct: 480 KKEAERFKRNGDYQQAAEIEYSKIPEKEKKEKELQHKWETMQQNGALLQNALTENNIAEI 539
Query: 22 ISRLTRI 2
+S+ T I
Sbjct: 540 VSQWTHI 546
>gi|1705924|sp|P53533|CLPB_SYNP7 CLPB PROTEIN >gi|885934 (U20646) ClpB [Synechococcus sp.]
Length = 883
Score = 216 bits (544), Expect = 2e-55
Identities = 125/296 (42%), Positives = 196/296 (65%), Gaps = 13/296 (4%)
Query: 889 SNTQYRGQFEERFKSLVKQI-ESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ ++RG+FEER +++K++ +S+ ILF+DE HT+V AGA +GS+D N+LK LA
Sbjct: 258 AGAKFRGEFEERLTAVLKEVTDSEGIIILFIDEMHTVVGAGAV-QGSMDAGNLLKTMLAR 316
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++CIGATT +YR+YIE D AL RRF ++ V +PT+ D I+ILRGL+ER+E HHGV+I
Sbjct: 317 GELRCIGATTLGKYRQYIEKDAALERRFQQVFVDQPTVEDTISILRGLKERYEVHHGVRI 376
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
SD+ALV A S +YIS+R LPD AIDLVD S+A + +E S+P + + ++LE
Sbjct: 377 SDNALVAAAVLSTRYISDRFLPDKAIDLVDE--SAARLKMEITSKPEELDEIDRKILQLE 434
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
++ + + E + R+ L+ L +LK E L + EK IT+++++K+++++
Sbjct: 435 MERLSLQKESDLAS--QERLQRLEKELADLKEEQRSLSSQWQAEKDVITDIQSVKEEIDQ 492
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES------------IKAVVTSKDIA 29
N + AE+ D A E+K+ L + +K++E+E ++ VT DIA
Sbjct: 493 VNLLIQQAERDYDLNKAAELKYGKLTELQRKLNEMEGGLATTHTSGKSLLREEVTEVDIA 552
Query: 28 EIISRLTRI 2
EIIS+ T I
Sbjct: 553 EIISKWTGI 561
>gi|3482974|emb|CAA20530| (AL031369) ATP-dependent Clp proteinase-like protein [Arabidopsis
thaliana]
Length = 874
Score = 215 bits (541), Expect = 4e-55
Identities = 120/296 (40%), Positives = 192/296 (64%), Gaps = 13/296 (4%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ ++RG FEER K+++K++ S+ ++ILF+DE HT+V AGA +G++D +N+LKP L
Sbjct: 238 AGAKFRGDFEERLKAVMKEVSASNGQTILFIDEIHTVVGAGAM-DGAMDASNLLKPMLGR 296
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++CIGATT EYRKYIE D AL RRF ++ +P++ D I+ILRGLRER+E HHGV I
Sbjct: 297 GELRCIGATTLTEYRKYIEKDPALERRFQQVLCVQPSVEDTISILRGLRERYELHHGVTI 356
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
SD ALV A + +YI+ R LPD AIDLVD A A + +E S+P + ++LE
Sbjct: 357 SDSALVSAAVLADRYITERFLPDKAIDLVDEA--GAKLKMEITSKPTELDGIDRAVIKLE 414
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
++ + + + +K R+ ++ L LK + L + +EK +T++++ K+++++
Sbjct: 415 MEKLSLKNDTDKAS--KERLQKIENDLSTLKQKQKELNVQWEKEKSLMTKIRSFKEEIDR 472
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES------------IKAVVTSKDIA 29
N ++ AE+ D A E+K+ L + +++ E E ++ VVT DIA
Sbjct: 473 VNLEIESAEREYDLNRAAELKYGTLLSLQRQLEEAEKNLTNFRQFGQSLLREVVTDLDIA 532
Query: 28 EIISRLTRI 2
EI+S+ T I
Sbjct: 533 EIVSKWTGI 541
>gi|3150046 (AF016634) ClpB chaperone homolog [Lactococcus lactis subsp.
cremoris]
Length = 867
Score = 214 bits (540), Expect = 6e-55
Identities = 120/296 (40%), Positives = 188/296 (62%), Gaps = 10/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K+++ +++ +D + ILF+DE HT+V AG + EGS+D N+LKP LA
Sbjct: 249 AGAKYRGEFEERLKAVLNEVKKADGQIILFIDELHTIVGAGKT-EGSMDAGNLLKPMLAR 307
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G++ IGATT EYRKY+E D+AL RRF K+ V EPT+ D I+ILRGL+ERFE HHGV I
Sbjct: 308 GELHLIGATTLDEYRKYMETDKALERRFQKVLVTEPTVEDTISILRGLKERFEIHHGVTI 367
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
D+AL+ A S +YI++R LPD AIDL+D A SA + +E S P + + ++LE
Sbjct: 368 HDNALIAAATLSNRYITDRFLPDKAIDLIDEA--SATIRVEMNSLPTELDQANRRLMQLE 425
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
I+ E ++E+ D R+ ++ + L+ E L+ + EKK + + + +LE
Sbjct: 426 IE--EAALKKERDDASKKRLEIIRGEIAELREENNQLKAQWEAEKKEVGNISEKRNELEH 483
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES---------IKAVVTSKDIAEII 20
+L +A+ + A +++ +P I K++ +E ++ VT + IAE++
Sbjct: 484 ARHELEEAQNEGNLEKAAALRYGKIPEIEKELKAIEEKAKSDDLSLVQESVTEEQIAEVV 543
Query: 19 SRLTRI 2
R+T I
Sbjct: 544 GRMTGI 549
>gi|1346246|sp|P31539|H104_YEAST HEAT SHOCK PROTEIN 104 >gi|2118114|pir||S61476 heat shock protein 104
- yeast (Saccharomyces cerevisiae) >gi|557873 (M67479)
heat shock protein 104 [Saccharomyces cerevisiae]
>gi|1360206|emb|CAA97475| (Z73131) ORF YLL026w
[Saccharomyces cerevisiae]
Length = 908
Score = 213 bits (537), Expect = 1e-54
Identities = 122/296 (41%), Positives = 184/296 (61%), Gaps = 15/296 (5%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +Y+G FEERFK ++K+IE S +LF+DE H ++ G D N+LKP+L+
Sbjct: 253 AGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNGKD-----DAANILKPALSR 307
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G++K IGATT EYR +E D A RRF KI V EP++ + ILRGL+ ++E HHGV+I
Sbjct: 308 GQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQPKYEIHHGVRI 367
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
D ALV A + +K+Y+ RRLPD A+DLVD +C+ V +++ + + + Q+ +++E
Sbjct: 368 LDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARDSKPEELDSKERQLQLIQVE 427
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
IKA+E D + + T R+ + +L+ EL PL + YNEEK EL K+KL++
Sbjct: 428 IKALERDEDADST--TKDRLKLARQKEASLQEELEPLRQRYNEEKHGHEELTQAKKKLDE 485
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES--------------IKAVVTSKD 35
K DAE+ D TA ++++ +P I K+I +LE I+ VV S
Sbjct: 486 LENKALDAERRYDTATAADLRYFAIPDIKKQIEKLEDQVAEEERRAGANSMIQNVVDSDT 545
Query: 34 IAEIISRLTRI 2
I+E +RLT I
Sbjct: 546 ISETAARLTGI 556
>gi|1705922|sp|P53532|CLPB_CORGL CLPB PROTEIN >gi|1163118 (U43536) heat-inducible expression; two
ATP-binding domains; ClpB homolog, similar to E. coli
ClpB protein, Swiss-Prot Accession Number P03815
[Corynebacterium glutamicum]
Length = 852
Score = 212 bits (535), Expect = 2e-54
Identities = 116/296 (39%), Positives = 186/296 (62%), Gaps = 10/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K+++ +I+ ++ + + F+DE HT+V AGAS E ++D NM+KP LA
Sbjct: 248 AGAKYRGEFEERLKAVLDEIKGANGEVVTFIDELHTIVGAGASGESAMDAGNMIKPLLAR 307
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++ +GATT EYRKYIE D AL RRF ++ V EPT+ D I ILRGL+ER+E HHGV+I
Sbjct: 308 GELRLVGATTLNEYRKYIEKDAALERRFQQVYVGEPTVEDAIGILRGLKERYEVHHGVRI 367
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
D ALV A + S +YI++R LPD AIDLVD A S + +++ Q + L+ + +E+E
Sbjct: 368 QDSALVAAAELSNRYITSRFLPDKAIDLVDEAASRLRMEIDSSPQEIDELERIVRRLEIE 427
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
E+ +E R+ L+ L + + +L L+ + EK I +++ +K++LE
Sbjct: 428 ----EMALSKESDAASKERLEKLRSELADEREKLSELKARWQNEKTAIDDVREMKEELEA 483
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES---------IKAVVTSKDIAEII 20
+ AE+ ++ E+++ +P + K+I + ES + VT IA+++
Sbjct: 484 LRSESDIAERDGNYGRVAELRYGRIPELEKQIEDAESKVEVNENAMLTEEVTPDTIADVV 543
Query: 19 SRLTRI 2
S T I
Sbjct: 544 SAWTGI 549
>gi|2465525 (U97124) ClpB/HSP100 [Synechococcus PCC7942]
Length = 895
Score = 212 bits (533), Expect = 4e-54
Identities = 117/296 (39%), Positives = 190/296 (63%), Gaps = 14/296 (4%)
Query: 889 SNTQYRGQFEERFKSLVKQI-ESDDKSILFVDEFHTMVSAGASNEGS-LDCTNMLKPSLA 716
+ +YRG+FEER ++++ ++ SD + +LF+DE HT+V AGA +GS +D N+LKP LA
Sbjct: 251 AGAKYRGEFEERLRAVLHEVTHSDGQMVLFIDELHTVVGAGAGQQGSAMDAGNLLKPMLA 310
Query: 715 SGKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVK 536
G+++CIGATT EYR+ IE D AL RRF ++ V +P++ D I ILRGL+ER+E HHGVK
Sbjct: 311 RGELRCIGATTTDEYRRTIEKDPALERRFQQVYVSQPSVEDTIAILRGLKERYEGHHGVK 370
Query: 535 ISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVEL 356
I+D AL+ A K S +YIS+R LPD AIDL+D A SA + +E S+P + + ++L
Sbjct: 371 ITDGALMAAAKLSHRYISDRFLPDKAIDLIDEA--SAQLKMEITSKPSELEDLERRLLQL 428
Query: 355 EIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
E++ + + E + + + R+ ++ L+ L+ + L + + +EK+ + EL L+++ E
Sbjct: 429 EMEQLSLSGENGQASVHSDRLQQIQTELQTLQEQQARLNQQWQQEKQLLEELGRLQEEEE 488
Query: 175 KYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES------------IKAVVTSKDI 32
+++ AE+ D E+K L + ++ +E ++ V DI
Sbjct: 489 TLRQQVNQAEREHDLNKGAELKFGQLEALQQQRQAIEEQIQALHANGQTLLREQVEEADI 548
Query: 31 AEIISRLTRI 2
AEI++R T I
Sbjct: 549 AEIVARWTNI 558
>gi|4098131 (U73653) clpB [Mycobacterium bovis]
Length = 877
Score = 211 bits (531), Expect = 6e-54
Identities = 122/296 (41%), Positives = 188/296 (63%), Gaps = 10/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSIL-FVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ ++YRG+FEER K+++ I++ I+ F+DE HT+V AGA+ EG++D NM+KP LA
Sbjct: 276 AGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPMLAR 335
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++ +GATT EYRK+IE D AL RRF ++ V EP++ D I ILRGL++R+E HHGV+I
Sbjct: 336 GELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVHHGVRI 395
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
+D ALV A S +YI+ R LPD AIDLVD A S + +E +S+PV + + + LE
Sbjct: 396 TDSALVAAATLSDRYITARFLPDKAIDLVDEAASR--LRMEIDSRPVEIDEVERLVRRLE 453
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
I+ E+ +E+ + A R+ L+ L + K +L L + EK I +++LK++LE
Sbjct: 454 IE--EMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQLEA 511
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKIS---------ELESIKAVVTSKDIAEII 20
+ AE+ D A E+++ +P + KK+ E +K V DIA+++
Sbjct: 512 LRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIADVV 571
Query: 19 SRLTRI 2
S T I
Sbjct: 572 SAWTGI 577
>gi|2909505|emb|CAA17390| (AL021931) clpB [Mycobacterium tuberculosis]
Length = 848
Score = 211 bits (531), Expect = 6e-54
Identities = 122/296 (41%), Positives = 188/296 (63%), Gaps = 10/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSIL-FVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ ++YRG+FEER K+++ I++ I+ F+DE HT+V AGA+ EG++D NM+KP LA
Sbjct: 247 AGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPMLAR 306
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++ +GATT EYRK+IE D AL RRF ++ V EP++ D I ILRGL++R+E HHGV+I
Sbjct: 307 GELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVHHGVRI 366
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
+D ALV A S +YI+ R LPD AIDLVD A S + +E +S+PV + + + LE
Sbjct: 367 TDSALVAAATLSDRYITARFLPDKAIDLVDEAASR--LRMEIDSRPVEIDEVERLVRRLE 424
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
I+ E+ +E+ + A R+ L+ L + K +L L + EK I +++LK++LE
Sbjct: 425 IE--EMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQLEA 482
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKIS---------ELESIKAVVTSKDIAEII 20
+ AE+ D A E+++ +P + KK+ E +K V DIA+++
Sbjct: 483 LRGESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQAREQVMLKEEVGPDDIADVV 542
Query: 19 SRLTRI 2
S T I
Sbjct: 543 SAWTGI 548
>gi|1653648|dbj|BAA18560| (D90915) ClpB protein [Synechocystis sp.]
Length = 898
Score = 210 bits (528), Expect = 1e-53
Identities = 129/296 (43%), Positives = 195/296 (65%), Gaps = 21/296 (7%)
Query: 889 SNTQYRGQFEERFKSLVKQI-ESDDKSILFVDEFHTMVSAGA-SNEGSLDCTNMLKPSLA 716
+ +YRG+FEER +S++K++ SD + ILF+DE HT+V AG GS+D N+LKP LA
Sbjct: 249 AGAKYRGEFEERLRSVMKEVTNSDGQIILFIDEVHTVVGAGGREGSGSMDAGNLLKPMLA 308
Query: 715 SGKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVK 536
G+++CIGATT EYRK IE D AL RRF ++ V +P++ D I+ILRGL+E++E HHGVK
Sbjct: 309 RGELRCIGATTLDEYRKNIEKDPALERRFQQVYVKQPSVDDTISILRGLKEKYEVHHGVK 368
Query: 535 ISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVEL 356
I+D ALV A S +YI +R LPD AIDLVD A +A + +E S+PV + ++L
Sbjct: 369 ITDSALVAAATLSHRYIQDRFLPDKAIDLVDEA--AARLKMEITSKPVELEDIDRRLMQL 426
Query: 355 EIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNE-------EKKNITELK 197
+++ + ++ E ++ + A + + K LE ++ E+ LE E EK+ + E+
Sbjct: 427 QMEKLSLEGEEKRPGLGADKSS--KERLEKIQQEITELEGQQQELSGQWLSEKQMLEEIN 484
Query: 196 NLKQKLEKYNKKLADAEKVRDHYTALEIKH---EILPH-IHKKISELESI--------KA 53
LK+K ++ ++ AE+ D A +IK+ E+L H I +K S+L I +
Sbjct: 485 TLKEKEQELRLQVEKAERATDWEKAAKIKYGELEVLQHDIEEKESKLLEIQGSGNTLLRE 544
Query: 52 VVTSKDIAEIISRLTRI 2
VT DIAEI++ T I
Sbjct: 545 QVTESDIAEIVAGWTGI 561
>gi|4102206 (AF010250) ATP dependent protease binding subunit [Salmonella
typhimurium]
Length = 341
Score = 208 bits (525), Expect = 3e-53
Identities = 113/296 (38%), Positives = 189/296 (63%), Gaps = 9/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKS-ILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K ++ + + + ILF+DE HTMV AG + +G++D NMLKP+LA
Sbjct: 28 AGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNMLKPALAR 86
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G++ C+GATT EYR+YIE D AL RRF K+ V EP++ D I ILRGL+ER+E HH V+I
Sbjct: 87 GELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQI 146
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
+D A+V A S +YI++R+LPD AIDL+D A SS + ++++ + + L ++ ++LE
Sbjct: 147 TDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLE 206
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+A+ +E + R++ L L++ + + LEE + EK +++ + +K +LE+
Sbjct: 207 QQAL----MKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 262
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKI--------SELESIKAVVTSKDIAEIIS 17
+ A +V D E+++ +P + K++ + ++ VT +IAE+++
Sbjct: 263 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEIAEVLA 322
Query: 16 RLTRI 2
R T I
Sbjct: 323 RWTGI 327
>gi|41114|emb|CAA40846| (X57620) analogue of ATP-dependent protease regulatory subunit
[Escherichia coli]
Length = 594
Score = 208 bits (525), Expect = 3e-53
Identities = 115/296 (38%), Positives = 191/296 (63%), Gaps = 9/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKS-ILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K ++ + + + ILF+DE HTMV AG + +G++D NMLKP+LA
Sbjct: 247 AGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNMLKPALAR 305
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G++ C+GATT EYR+YIE D AL RRF K+ V EP++ D I ILRGL+ER+E HH V+I
Sbjct: 306 GELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQI 365
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
+D A+V A S +YI++R+LPD AIDL+D A SS + ++++ + + L ++ ++LE
Sbjct: 366 TDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLE 425
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+A+ +E + R++ L L + + + LEE + EK +++ + +K +LE+
Sbjct: 426 QQAL----MKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKI---SELES-----IKAVVTSKDIAEIIS 17
+ A +V D E+++ +P + K++ ++LE ++ VT +IAE+++
Sbjct: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLA 541
Query: 16 RLTRI 2
R T I
Sbjct: 542 RWTGI 546
>gi|2506300|sp|P03815|CLPB_ECOLI CLPB PROTEIN (HEAT SHOCK PROTEIN F84.1) >gi|1788943 (AE000345) heat
shock protein [Escherichia coli]
>gi|1799995|dbj|BAA16476| (D90887) CLPB PROTEIN (HEAT
SHOCK PROTEIN F84.1). [Escherichia coli]
Length = 857
Score = 208 bits (525), Expect = 3e-53
Identities = 115/296 (38%), Positives = 191/296 (63%), Gaps = 9/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKS-ILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K ++ + + + ILF+DE HTMV AG + +G++D NMLKP+LA
Sbjct: 247 AGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNMLKPALAR 305
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G++ C+GATT EYR+YIE D AL RRF K+ V EP++ D I ILRGL+ER+E HH V+I
Sbjct: 306 GELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQI 365
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
+D A+V A S +YI++R+LPD AIDL+D A SS + ++++ + + L ++ ++LE
Sbjct: 366 TDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLE 425
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+A+ +E + R++ L L + + + LEE + EK +++ + +K +LE+
Sbjct: 426 QQAL----MKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKI---SELES-----IKAVVTSKDIAEIIS 17
+ A +V D E+++ +P + K++ ++LE ++ VT +IAE+++
Sbjct: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLA 541
Query: 16 RLTRI 2
R T I
Sbjct: 542 RWTGI 546
>gi|95711|pir||D35905 ATP-dependent Clp proteinase (EC 3.4.21.-) regulatory chain B -
Escherichia coli >gi|147365 (M29364) ATP-dependent
protease binding subunit [Escherichia coli]
Length = 857
Score = 208 bits (525), Expect = 3e-53
Identities = 115/296 (38%), Positives = 191/296 (63%), Gaps = 9/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKS-ILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K ++ + + + ILF+DE HTMV AG + +G++D NMLKP+LA
Sbjct: 247 AGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKA-DGAMDAGNMLKPALAR 305
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G++ C+GATT EYR+YIE D AL RRF K+ V EP++ D I ILRGL+ER+E HH V+I
Sbjct: 306 GELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQI 365
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
+D A+V A S +YI++R+LPD AIDL+D A SS + ++++ + + L ++ ++LE
Sbjct: 366 TDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLE 425
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+A+ +E + R++ L L + + + LEE + EK +++ + +K +LE+
Sbjct: 426 QQAL----MKESDEASKKRLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQ 481
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKI---SELES-----IKAVVTSKDIAEIIS 17
+ A +V D E+++ +P + K++ ++LE ++ VT +IAE+++
Sbjct: 482 AKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLA 541
Query: 16 RLTRI 2
R T I
Sbjct: 542 RWTGI 546
>gi|4376410|gb|AAD18297| (AE001601) Clp Protease ATPase [Chlamydia pneumoniae]
Length = 866
Score = 208 bits (524), Expect = 4e-53
Identities = 117/296 (39%), Positives = 190/296 (63%), Gaps = 10/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIES-DDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER KS++K +ES D + I+F+DE HT+V AGA+ +G++D N+LKP+LA
Sbjct: 246 AGAKYRGEFEERLKSVLKDVESGDGEHIIFIDEVHTLVGAGAT-DGAMDAANLLKPALAR 304
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G + CIGATT EY+KYIE D AL RRF I V EP++ D + ILRGLRE++E HGV+I
Sbjct: 305 GTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFILRGLREKYEIFHGVRI 364
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
++ AL AV S +YI +R LPD AIDL+D A S + + + P+ + ++ ++ ++
Sbjct: 365 TEGALNAAVLLSYRYIPDRFLPDKAIDLIDEAASLIRMQIGSLPLPIDEKERELAALIVK 424
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+AI +RE++ + ++ ++ L+ EL L ++EEKK I+ LK K LE
Sbjct: 425 QEAI----KREQSPSYQEEADAMQKSIDALREELASLRLGWDEEKKLISGLKEKKNSLES 480
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES---------IKAVVTSKDIAEII 20
+AE+V D+ E+++ ++P + ++I + E+ ++ V + IA+++
Sbjct: 481 MKFSEEEAERVADYNRVAELRYSLIPQLEEEIKQDEASLNQRDNRLLQEEVDERLIAQVV 540
Query: 19 SRLTRI 2
+ T I
Sbjct: 541 ANWTGI 546
>gi|3322325 (AE001191) ATP-dependent Clp protease subunit B (clpB) [Treponema
pallidum]
Length = 878
Score = 207 bits (522), Expect = 7e-53
Identities = 124/296 (41%), Positives = 186/296 (61%), Gaps = 13/296 (4%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ ++RG+FEER K++++ ++ SD ILF+DE HT+V AGAS EGS+D +N+LKP+LA
Sbjct: 247 AGAKFRGEFEERLKAVIEAVQKSDGGVILFIDELHTLVGAGAS-EGSMDASNLLKPALAR 305
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++ IGATT EYRKYIE D AL RRF ++ +PT+ D I ILRGL+E++E HHGV+I
Sbjct: 306 GELRSIGATTLNEYRKYIEKDAALERRFQQVYCVQPTVEDTIAILRGLQEKYEVHHGVRI 365
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
D+ALV A S +YI+NR LPD AIDLVD A S + +E ESQPV + + + ++L
Sbjct: 366 KDEALVAATVLSDRYITNRFLPDKAIDLVDEAASR--LKMEIESQPVELDQVERKILQLN 423
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
I+ + +E R+ L+ L ++ + EK I E + K++LE+
Sbjct: 424 IEKASL--LKESDPASKERLEKLEKELAGFLERRAAMQVQWQNEKGRIEESRRYKEELER 481
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKI----SELES--------IKAVVTSKDIA 29
+ + D A E+++ +P + KKI +E+E ++ V +DIA
Sbjct: 482 LRIEETMFSREGDLNKAAELRYGKIPELEKKIMLLTAEVEKKSGLEGQLLREEVCEEDIA 541
Query: 28 EIISRLTRI 2
+IIS T I
Sbjct: 542 KIISMWTGI 550
>gi|3328511 (AE001285) Clp Protease ATPase [Chlamydia trachomatis]
Length = 867
Score = 205 bits (515), Expect = 5e-52
Identities = 117/296 (39%), Positives = 186/296 (62%), Gaps = 10/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER KS++K +E S+ + ILF+DE HT+V AGA+ +G++D N+LKP+LA
Sbjct: 246 AGAKYRGEFEERLKSVLKGVEASEGECILFIDEVHTLVGAGAT-DGAMDAANLLKPALAR 304
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G + CIGATT EY+KYIE D AL RRF I V EP++ D + ILRGLRE++E HGV+I
Sbjct: 305 GTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFILRGLREKYEIFHGVRI 364
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
++ AL AV S +YI++R LPD AIDL+D A S + + + P+ + ++ ++ ++
Sbjct: 365 TEGALNAAVVLSYRYITDRFLPDKAIDLIDEAASLIRMQIGSLPLPIDEKERELSALIVK 424
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+AI +RE+ D++ ++ +K EL L ++EEK IT LK K LE
Sbjct: 425 QEAI----KREQAPAYQEEAEDMQKAIDRVKEELAALRLRWDEEKGLITGLKEKKNALEN 480
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES---------IKAVVTSKDIAEII 20
+AE+ D+ E+++ ++P + ++I E ++ V + IA+++
Sbjct: 481 LKFAEEEAERTADYNRVAELRYSLIPSLEEEIHLAEEALNQRDGRLLQEEVDERLIAQVV 540
Query: 19 SRLTRI 2
+ T I
Sbjct: 541 ANWTGI 546
>gi|1705923|sp|P47597|CLPB_MYCGE CLPB PROTEIN >gi|1361459|pir||C64239 ATP-dependent proteinase clpB
(regulator component) homolog - Mycoplasma genitalium
(SGC3) >gi|3844939 (U39717) ATP-dependent Clp protease,
ATPase subunit (clpB) [Mycoplasma genitalium]
Length = 714
Score = 204 bits (514), Expect = 6e-52
Identities = 113/296 (38%), Positives = 184/296 (61%), Gaps = 11/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQI-ESDDKSILFVDEFHTMVSAGA-SNEGSLDCTNMLKPSLA 716
+ T+++G+FE+R +++KQ+ ES+ + ILF+DE H +V G S+ G++D N+LKP LA
Sbjct: 101 AGTKFQGEFEKRINTILKQVKESNGRIILFIDEIHQIVGLGRNSSSGAMDIANILKPMLA 160
Query: 715 SGKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVK 536
G+IK IGATT EYR+YIE D AL RRF KI + EP+ + +TI+RGL+ R+E H +
Sbjct: 161 RGEIKVIGATTLKEYREYIEKDGALERRFQKILINEPSSQEALTIMRGLKTRWELFHNIT 220
Query: 535 ISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVEL 356
I D ALV AV+ S +YI+ R LPD AIDL+D A + + +E + LK ++ ++E
Sbjct: 221 IFDSALVAAVEMSTRYINERNLPDKAIDLIDEAAAKIKTEMSSEPVAIDSLKREIINLET 280
Query: 355 EIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
E A++ D E + + LK L+ LK + L + +EK + + LK+++E
Sbjct: 281 EYAALKQDKENDNKQSKKEYLEKLKKQLDALKQKRDSLINEWKKEKADFENINKLKKEIE 340
Query: 175 KYNKKLADAEKVRDHYTALEIKHEILPHIHKKI---------SELESIKAVVTSKDIAEI 23
++ KL + ++ +A +I + +P + K++ S+ + K V+ +IAE+
Sbjct: 341 EFQTKLETYQSEGNYESASKILYSDIPRLKKELESAQQKYATSKHDLFKTEVSENEIAEV 400
Query: 22 ISRLTRI 2
IS+ T I
Sbjct: 401 ISQTTGI 407
>gi|3661535 (AF090118) heat shock protein hsp104 [Plasmodium falciparum]
Length = 752
Score = 203 bits (511), Expect = 1e-51
Identities = 123/296 (41%), Positives = 198/296 (66%), Gaps = 64/296 (21%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG FEER KS++K+++ ++ + ++F+DE HT+V AGA EG+LD N+LKP LA
Sbjct: 256 AGAKYRGDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPMLAR 315
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++CIGATT EYR++IE D+AL RRF +I V +P++ + I+ILRGL+ER+E HHGV+I
Sbjct: 316 GELRCIGATTVSEYRQFIEKDKALERRFQQILVEQPSVDETISILRGLKERYEVHHGVRI 375
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
D ALV A S +YIS R LPD AIDL+D A S+ + L S+P+ + + ++LE
Sbjct: 376 LDSALVQAAVLSDRYISYRFLPDKAIDLIDEAASNLKIQL--SSKPIQLENIEKQLIQLE 433
Query: 352 IKAIEIDYEREKT-------------------------------------------DILA 302
++ I I +++K + L
Sbjct: 434 MEKISILGDKQKNLFNYSSVANTHNNNNNSSISSNNSSSYGNAEETEATVDYTKSPNFLK 493
Query: 301 ARINDLKIH--------LENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAE 146
RIN+ +I + L+ E + +S++ EK + ++ +K++++ ++ AE
Sbjct: 494 KRINEKEIDRLKMIDRIMSELRKEQRKILDSWSTEKSYVDNIRAIKERIDVVKIEIEKAE 553
Query: 145 KVRDHYTALEIKHEILPHIHKKISELES------------IKAVVTSKDIAEIISRLTRI 2
+ D A E++ E LP + K++ + E +K VTS+DI I+S T I
Sbjct: 554 RYFDLNRAAELRFETLPDLEKQLKKAEENYLNDIPEKSRILKDEVTSEDIVNIVSMSTGI 613
>gi|3063758|emb|CAA73776| (Y13333) heat shock protein [Campylobacter jejuni]
Length = 857
Score = 203 bits (510), Expect = 2e-51
Identities = 109/296 (36%), Positives = 185/296 (61%), Gaps = 11/296 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ +YRG+FE+R K++V ++ + ILF+DE HT+V AGAS EGS+D N+LKP+LA G
Sbjct: 248 AGAKYRGEFEDRLKAVVNEVIKSENIILFIDEIHTIVGAGAS-EGSMDAANILKPALARG 306
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
++ IGATT EYRKY E D AL RRF +NV EP++++ + +LRG++E+ E HH V I+
Sbjct: 307 ELHTIGATTLKEYRKYFEKDAALQRRFQPVNVGEPSVNEALAMLRGIKEKLEIHHNVTIN 366
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
D ALV A K SK+YI++R LPD AIDL+D A + + +E+E + +++ + ++E+E
Sbjct: 367 DSALVAAAKLSKRYITDRFLPDKAIDLIDEAAAELKMQIESEPSSLRKVRKDIETLEVEN 426
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKY 170
+A++++ + + R++++ L NLK + L + EK + K++++
Sbjct: 427 EALKMENDEKN----QKRLDEIAKELANLKEKQNALNSQFENEKSVFDGISAKKKEIDLL 482
Query: 169 NKKLADAEKVRDHYTALEIKHEILPHIHKKISELES-----------IKAVVTSKDIAEI 23
+ + A+ + A E+++ +P + K++ LE +K V +A I
Sbjct: 483 KNEASLAKARGEFQKAAELEYGKIPSLEKEVEILEDKWKKMSENGVLLKNQVDEDLVAGI 542
Query: 22 ISRLTRI 2
+S+ T I
Sbjct: 543 LSKWTGI 549
>gi|2118113|pir||S67315 heat shock protein 78, mitochondrial - yeast (Saccharomyces
cerevisiae) >gi|1136213|emb|CAA92715| (Z68329) Hsp78p
[Saccharomyces cerevisiae] >gi|1226034|emb|CAA94097|
(Z70202) Hsp78p [Saccharomyces cerevisiae]
Length = 811
Score = 202 bits (508), Expect = 3e-51
Identities = 118/296 (39%), Positives = 195/296 (65%), Gaps = 12/296 (4%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K ++++I+ ++ K I+F+DE H ++ G + +GS+D +N+LKP LA
Sbjct: 184 AGAKYRGEFEERLKKVLEEIDKANGKVIVFIDEVHMLLGLGKT-DGSMDASNILKPKLAR 242
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G ++CI ATT E+ K IE D AL+RRF I + EP++SD I+ILRGL+ER+E HHGV+I
Sbjct: 243 G-LRCISATTLDEF-KIIEKDPALSRRFQPILLNEPSVSDTISILRGLKERYEVHHGVRI 300
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQP--VTMLKEQMWSVE 359
+D ALV A S +YI++R LPD AIDLVD AC A++ L++ES+P + L + ++
Sbjct: 301 TDTALVSAAVLSNRYITDRFLPDKAIDLVDEAC--AVLRLQHESKPDEIQKLDRAIMKIQ 358
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKL 179
+E++++ ++E + R L+ LE +EL L + ++ E+ I +KN K L
Sbjct: 359 IELESL----KKETDPVSVERREALEKDLEMKNDELNRLTKIWDAERAEIESIKNAKANL 414
Query: 178 EKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIK---------AVVTSKDIAE 26
E+ +L ++ D+ A E+++ +P + KK++ E K VTS DI++
Sbjct: 415 EQARIELEKCQREGDYTKASELRYSRIPDLEKKVALSEKSKDGDKVNLLHDSVTSDDISK 474
Query: 25 IISRLTRI 2
+++++T I
Sbjct: 475 VVAKMTGI 482
>gi|1197585 (U46549) ClpB [Plasmodium berghei]
Length = 908
Score = 201 bits (505), Expect = 7e-51
Identities = 126/296 (42%), Positives = 191/296 (63%), Gaps = 43/296 (14%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDD-KSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG FEER KS++K+I+ + ++F+DE HT+V AGA EG+LD N+LKP LA
Sbjct: 257 AGAKYRGHFEERLKSILKEIQDQKGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPLLAR 316
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++CIGATT EYR++IE D+AL RRF +I V P++ + I+ILRGL+ER+E HHGV+I
Sbjct: 317 GELRCIGATTVSEYRQFIEKDKALERRFQQILVVNPSVDETISILRGLKERYEVHHGVRI 376
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
D ALV A S +YIS R LPD AIDL+D A S+ + L ++ + +++Q+ +E+E
Sbjct: 377 LDSALVQAAILSDRYISYRFLPDKAIDLIDEAASNLKIQLSSKPIQLDNIEKQLIQLEME 436
Query: 352 IKAI----------------------EIDYERE----KTDILAARINDLKI--HLEN-LK 260
+I DY + K I IN LK H+ N L+
Sbjct: 437 KISILGDKQSASLINKSNSGNDNNNVSTDYTQSQNFIKKRISEKEINRLKTIDHIMNELR 496
Query: 259 NELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKK 80
E + ES+ EK + ++ +K++++ ++ AE+ D A E++ E LP + K+
Sbjct: 497 KEQKNILESWTSEKMYVDNIRAIKERIDVVKIEIEKAERYFDLNRAAELRFERLPDLEKQ 556
Query: 79 ISEL-------------ESIKAVVTSKDIAEIISRLTRI 2
+ +K VTS+DI I+S T I
Sbjct: 557 LKTAAEENYVNDIPERNRMLKDEVTSEDIMNIVSVSTGI 595
>gi|2493733|sp|P75247|CLPB_MYCPN CLPB PROTEIN >gi|2146076|pir||S73637 ATP-dependent protease binding
chain clpB - Mycoplasma pneumoniae (SGC3) (ATCC 29342)
>gi|1673983 (AE000028) Mycoplasma pneumoniae,
ATP-dependent protease binding subunit ClpB; similar to
GenBank Accession Number F64098, from H. influenzae
[Mycoplasma pneumoniae]
Length = 715
Score = 201 bits (505), Expect = 7e-51
Identities = 117/296 (39%), Positives = 183/296 (61%), Gaps = 13/296 (4%)
Query: 889 SNTQYRGQFEERFKSLVKQI-ESDDKSILFVDEFHTMVSAGA-SNEGSLDCTNMLKPSLA 716
+ TQY+G+FE+R ++KQ+ ES+ K ILF+DE H +V G S+ G++D N+LKP LA
Sbjct: 101 AGTQYQGEFEKRVNGILKQVKESNGKIILFIDEIHQIVGLGRNSSSGAMDIANILKPMLA 160
Query: 715 SGKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVK 536
G+IK IGATT EYR+Y+E D AL RRF KI V EP+ + +TI+RGL+ R+E H +
Sbjct: 161 RGEIKVIGATTLKEYREYVEKDGALERRFQKILVSEPSQQEALTIMRGLKTRWELFHNLT 220
Query: 535 ISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTM--LKEQMWSV 362
I D ALV AV+ S +YI +R LPD AIDL+D A SA + E S+PV + LK ++ ++
Sbjct: 221 IFDSALVAAVEMSARYIPDRNLPDKAIDLIDEA--SAKIKTEMASEPVVIDTLKREIINL 278
Query: 361 ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK 182
E E A++ D E +++LK L+ LK + L + +EK N + LK++
Sbjct: 279 ETEYAALKQDKENADNKKKQGHLDNLKQQLDELKKKRDSLTAEWKKEKTNFESINKLKKE 338
Query: 181 LEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES---------IKAVVTSKDIA 29
+E +L + ++ A +I + +P + ++ + + K V+ ++A
Sbjct: 339 IEDLQTRLELYQTEGNYEAASKILYYDIPKLKNQLEQAQKKYVDSKHDLFKTEVSENEVA 398
Query: 28 EIISRLTRI 2
E++S+ T I
Sbjct: 399 EVVSQATGI 407
>gi|462355|sp|P33416|HSP7_YEAST MITOCHONDRIAL HEAT SHOCK PROTEIN 78 PRECURSOR >gi|388369 (L16533)
heat shock protein 78 [Saccharomyces cerevisiae]
Length = 811
Score = 197 bits (496), Expect = 8e-50
Identities = 117/296 (39%), Positives = 193/296 (64%), Gaps = 12/296 (4%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K ++++I+ ++ K I+F+DE H ++ G + +GS+D +N+LKP LA
Sbjct: 184 AGAKYRGEFEERLKKVLEEIDKANGKVIVFIDEVHMLLGLGKT-DGSMDASNILKPKLAR 242
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G + CI ATT E+ K IE D AL+RRF I + EP++SD I+ILRGL+ER+E HHGV+I
Sbjct: 243 G-LACISATTLDEF-KIIEKDPALSRRFQPILLNEPSVSDTISILRGLKERYEVHHGVRI 300
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQP--VTMLKEQMWSVE 359
+D ALV A S +YI++R LPD AIDLVD AC A++ L++ES+P + L + ++
Sbjct: 301 TDTALVSAAVLSNRYITDRFLPDKAIDLVDEAC--AVLRLQHESKPDEIQKLDRAIMKIQ 358
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKL 179
+E++++ ++E + R L+ LE +EL L + ++ E+ I +KN K L
Sbjct: 359 IELESL----KKETDPVSVERREALEKDLEMKNDELNRLTKIWDAERAEIESIKNAKANL 414
Query: 178 EKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIK---------AVVTSKDIAE 26
E+ +L ++ + A E+++ +P + KK++ E K VTS DI++
Sbjct: 415 EQARIELEKCQREGVYTKASELRYSRIPDLEKKVALSEKSKDGDKVNLLHDSVTSDDISK 474
Query: 25 IISRLTRI 2
+++++T I
Sbjct: 475 VVAKMTGI 482
>gi|228154|prf||1717391A protein Hsp104 [Saccharomyces cerevisiae]
Length = 908
Score = 195 bits (491), Expect = 3e-49
Identities = 121/296 (40%), Positives = 179/296 (59%), Gaps = 16/296 (5%)
Query: 889 SNTQYRGQFEERFKSLVKQIE-SDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +Y+G FEERFK ++K+IE S +LF+DE H ++ G D N+LKP+L+
Sbjct: 253 AGAKYKGDFEERFKGVLKEIEESKTLIVLFIDEIHMLMGNGKD-----DAANILKPALSR 307
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G++K IGATT EYR +E D A RRF KI V EP++ + ILRGL+ ++E HHGV+I
Sbjct: 308 GQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQPKYEIHHGVRI 367
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
D ALV A + +K+Y+ RRLPD A+DLVD +C+ V +++ + + KEQ S+ ++
Sbjct: 368 LDSALVTAAQLAKRYLPYRRLPDSALDLVDISCAGVAVARDSKPEELDS-KEQ--SIAID 424
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLE-NLKNELIPLEESYNEEKKNITELKNLKQKLE 176
+ ER + + R L E +L+ EL PL + YNEEK EL K+KL+
Sbjct: 425 SSRDKSSRERVECRLHTKRKLKLARQKEASLQEELEPLRQRYNEEKHGHEELTQAKKKLD 484
Query: 175 KYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES--------------IKAVVTSK 38
+ K AE+ D TA ++++ +P I K+I +LE I+ VV S
Sbjct: 485 ELENKALVAERRYDTRTAADLRYFAIPDIKKQIEKLEDQVAEEERRAGANSMIQNVVDSD 544
Query: 37 DIAEIISRLTRI 2
I+E +RLT I
Sbjct: 545 TISETAARLTGI 556
>gi|2984005 (AE000750) ATPase subunit of ATP-dependent protease [Aquifex
aeolicus]
Length = 1006
Score = 194 bits (487), Expect = 9e-49
Identities = 118/296 (39%), Positives = 181/296 (60%), Gaps = 4/296 (1%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ ++YRG+FEER K+L+ +++ ILF+DE HT+V AGA+ EG++D N++KP+LA G
Sbjct: 381 AGSKYRGEFEERLKALLDEVKEKGNVILFIDEIHTVVGAGAA-EGAVDAANIMKPALARG 439
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+I+ IGATT EYRKYIE D AL RRF + V EPT I IL+GLR R E H VKIS
Sbjct: 440 EIRVIGATTVDEYRKYIEKDPALERRFQPVFVDEPTEEQTIEILKGLRPRLEQFHKVKIS 499
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
D+A+ AVK +K+Y++ RRLPD AID +D A + + + + ++ ++ ++E +I
Sbjct: 500 DEAIEAAVKLTKRYVTFRRLPDKAIDALDQAAARKKLKVIGTPPEIQEIERKIKALEEQI 559
Query: 349 KAIEI--DYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
+ DYE+E A++ K LE K EL+ ++ LK+K+E
Sbjct: 560 IEANLKGDYEKE------AQLKIEKAKLEKEKQELLGKVGGVE------AKIAELKKKIE 607
Query: 175 KYNKKLADAEKVRDHYTALEIKHE--ILPHIHKKISELESIKAVVTSKDIAEIISRLTRI 2
+ ++K+ +A + D+ E+K E L KK+ + +S + VVT D+AE++S T I
Sbjct: 608 ELDEKIKEAAEKGDYEKEAELKIEKAKLEKELKKLEQEKSKELVVTWDDVAEVVSEWTGI 667
>gi|1168972|sp|P46523|CLPA_BRANA ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPA PRECURSOR
>gi|480969|pir||S37557 clpA protein - rape (fragment)
>gi|406311|emb|CAA53077| (X75328) clpA [Brassica napus]
Length = 874
Score = 187 bits (469), Expect = 1e-46
Identities = 111/280 (39%), Positives = 176/280 (62%), Gaps = 4/280 (1%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG+FEER K L+++I+ D+ ILF+DE HT++ AGA+ EG++D N+LKP+LA G
Sbjct: 290 AGTKYRGEFEERVKKLMEEIKQSDEIILFIDEVHTLIGAGAA-EGAIDAANILKPALARG 348
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++CIGATT EYRK+IE D AL RRF + VPEPT+ + I IL+GLRER+E HH ++ +
Sbjct: 349 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYT 408
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
D++LV A + S +YIS+R LPD AIDL+D A S + + L++++ + E
Sbjct: 409 DESLVAAAQLSYQYISDRFLPDRAIDLMDEAGSRVRLRHAQVPEEARELEKELRQITKEN 468
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENLK---NELIPLEESYNEEKKNITELKNLKQKL 179
+A+ + EK L R +L+ + ++ E+ E +E +TE +++ +
Sbjct: 469 EAVR-GQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKAESETGDEGPMVTE-SDIQHIV 526
Query: 178 EKYNKKLADAEKVRDHYTALEIKHEILPHIHKK-ISELESIKAV 50
+ L EKV + L +K E +HK+ I + E++KA+
Sbjct: 527 SSWTGIL--VEKVSTDESDLLLKME--ETLHKRVIGQDEAVKAI 566
>gi|4322269|gb|AAD15989| (AF076980) heat shock protein ClpB [Streptomyces albus G]
Length = 857
Score = 185 bits (466), Expect = 3e-46
Identities = 114/296 (38%), Positives = 186/296 (62%), Gaps = 16/296 (5%)
Query: 889 SNTQYRGQFEERFKSLVKQI-ESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K+++ +I ESD + + F+DE HT+V AGA+ + ++D NMLKP LA
Sbjct: 248 AGAKYRGEFEERLKTVLSEIKESDGQIVTFIDELHTVVGAGAA-DSAMDAGNMLKPMLAR 306
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G+++ +GATT EYR+ IE D AL RRF ++ V EP++ D I ILRGL+ R+EAHH V+I
Sbjct: 307 GELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPSVEDSIAILRGLKGRYEAHHKVQI 366
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
+D ALV A S +YI++R LPD AIDLVD A S + +E +S P+ + + Q L+
Sbjct: 367 ADSALVAAATLSDRYITSRFLPDKAIDLVDEAASR--LRMEIDSSPLEIDELQRSVDRLK 424
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEES------YNEEKKNITELKNL 191
++ + +D E + + LE L+ +L E S + +EK+++ + L
Sbjct: 425 MEELALDRETDPAS---------RQRLEKLRRDLADRERSCAAHRPWEKEKQSLNRVGEL 475
Query: 190 KQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKI----SELES-----IKAVVTSK 38
K++L++ + A++ D TA ++ + +P + + + +E E+ +K V
Sbjct: 476 KERLDELRGQAERAQQHGDFDTASKLLYGEIPTLERDLRWRPAEEEAAKDTMVKEEVGPD 535
Query: 37 DIAEIISRLTRI 2
DIA+++ T I
Sbjct: 536 DIADVVGSWTGI 547
>gi|2921158 (AF022909) ClpC [Arabidopsis thaliana]
Length = 928
Score = 185 bits (466), Expect = 3e-46
Identities = 99/229 (43%), Positives = 147/229 (63%), Gaps = 3/229 (1%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG+FEER K L+++I D+ ILF+DE HT++ AGA+ EG++D N+LKP+LA G
Sbjct: 342 AGTKYRGEFEERLKKLMEEIRQSDEIILFIDEVHTLIGAGAA-EGAIDAANILKPALARG 400
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++CIGATT EYRK+IE D AL RRF + VPEPT+ + I IL+GLRER+E HH ++ +
Sbjct: 401 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYT 460
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
D++LV A + S +YIS+R LPD AIDL+D A S + + V L++++ + E
Sbjct: 461 DESLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQVPEEVRELEKELRQITKEK 520
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENLK---NELIPLEESYNEEKKNITE 203
+ EK L R +L+ + ++ E+ E EE +TE
Sbjct: 521 NEAVRGQDFEKAGTLRDREIELRAEVSAIQAKGKEMSKAESETGEEGPMVTE 572
>gi|3913865|sp|Q54316|HLYB_TREHY HEMOLYSIN B >gi|511145|emb|CAA51655| (X73140) hemolysin
[Brachyspira hyodysenteriae]
Length = 828
Score = 185 bits (464), Expect = 5e-46
Identities = 114/296 (38%), Positives = 159/296 (53%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG+FEER K++V +I+ I+F+DE HT++ AG + EG+LD NMLKP+L+ G
Sbjct: 258 AGTKYRGEFEERIKNIVLEIKKASNIIIFIDELHTLIGAGGA-EGALDAANMLKPALSRG 316
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+I+CIGATT EY+KYIE D AL RRF INV EP+I D I IL G++ ++E HH VK +
Sbjct: 317 EIQCIGATTINEYKKYIEKDGALVRRFQPINVEEPSIEDTIEILNGIKGKYEEHHKVKYT 376
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
D+A+ A SK+YI R LPD AIDL+D A S A L N ++P
Sbjct: 377 DEAINAAAVLSKRYIFERHLPDKAIDLIDEAGSRA--RLLNMTRP--------------- 419
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKY 170
DL+ +E L N++KK + E +N +
Sbjct: 420 ----------------QEFKDLEKKIEEL-----------NQQKKRVVESQNFE------ 446
Query: 169 NKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDIAEIISRLTRI 2
DA K+RD T+L+ E+ K E E I+ + DI +IS +T I
Sbjct: 447 -----DAAKIRDEITSLQ--EELSKKEEKCREEREKIETFIEEDDIRHVISEITNI 495
>gi|399213|sp|P31542|CLAB_LYCES ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPA HOMOLOG CD4B
PRECURSOR >gi|100190|pir||B35905 CD4B protein - tomato
>gi|170435 (M32604) ATP-dependent protease (CD4B)
[Lycopersicon esculentum]
Length = 923
Score = 183 bits (460), Expect = 1e-45
Identities = 99/219 (45%), Positives = 143/219 (65%), Gaps = 2/219 (0%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG+FEER K L+++I+ D+ ILF+DE HT++ AGA+ EG++D N+LKP+LA G
Sbjct: 341 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAA-EGAIDAANILKPALARG 399
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++CIGATT EYRK+IE D AL RRF + VPEPT+ + I IL+GLRER+E HH ++ +
Sbjct: 400 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYT 459
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
D+ LV A + S +YIS+R LPD AIDL+D A S + + L++++ + E
Sbjct: 460 DEDLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEAKELEKELRQITKEK 519
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENL--KNELIPLEES 233
+ EK L R DLK + L KN+ + ES
Sbjct: 520 NEAVRGQDFEKAGELRDREMDLKAQITALIDKNKEVSKAES 560
>gi|461753|sp|P35100|CLPA_PEA ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPA HOMOLOG PRECURSOR
>gi|419773|pir||S31164 ATP-dependent ClpB proteinase
regulatory chain homolog precursor, chloroplast - garden
pea >gi|169128 (L09547) nuclear encoded precursor to
chloroplast protein [Pisum sativum]
Length = 922
Score = 182 bits (457), Expect = 3e-45
Identities = 101/229 (44%), Positives = 148/229 (64%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG+FEER K L+++I+ D ILF+DE HT++ AGA+ EG++D N+LKP+LA G
Sbjct: 341 AGTKYRGEFEERLKKLMEEIKQSDDIILFIDEVHTLIGAGAA-EGAIDAANILKPALARG 399
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++CIGATT EYRK+IE D L RRF + VPEPT+ + I IL+GLRER+E HH ++ +
Sbjct: 400 ELQCIGATTLDEYRKHIEKDPDLERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYT 459
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
D+AL+ A + S +YIS+R LPD AIDLVD A S V L++ P E+ ++ E+
Sbjct: 460 DEALIAAAQLSYQYISDRFLPDKAIDLVDEAGSR--VRLQHAQLP-----EEAKELDKEV 512
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITE 203
+ I + E + + +L+ +LK ++ L E E K TE
Sbjct: 513 RKIVKEKEEYVRNQDFEKAGELRDKEMDLKAQISALIEKGKEMSKAETE 561
>gi|4127449|emb|CAA11855| (AJ224158) clpC [Bacillus anthracis]
Length = 344
Score = 181 bits (455), Expect = 5e-45
Identities = 103/228 (45%), Positives = 149/228 (65%), Gaps = 6/228 (2%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG+FE+R K ++ +I ILF+DE HT++ AG + EG++D +N+LKPSLA G
Sbjct: 39 AGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGA-EGAIDASNILKPSLARG 97
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++CIGATT EYRKYIE D AL RRF I+V EP++ + IL+GLR+R+EAHH V I+
Sbjct: 98 ELQCIGATTLDEYRKYIEKDAALERRFQPIHVDEPSLDESTQILKGLRDRYEAHHRVSIT 157
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
DDA+ AVK S +YI++R LPD AIDL+D A S V L + + P + ELE+
Sbjct: 158 DDAIDAAVKLSDRYITDRFLPDKAIDLIDEAASK--VRLRSYTTPPNL-------KELEV 208
Query: 349 KAIEIDYERE-----KTDILAARINDLKIHL-ENLKNELIPLEESYNEEKKNIT 206
K EI E++ + AA + D++ L E L++ +E +E +T
Sbjct: 209 KLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVT 262
>gi|586900|sp|P37571|MECB_BACSU NEGATIVE REGULATOR OF GENETIC COMPETENCE MECB
>gi|2118112|pir||I40508 adenosine triphosphatase clpC -
Bacillus subtilis >gi|442360 (U02604) ClpC adenosine
triphosphatase [Bacillus subtilis]
>gi|467474|dbj|BAA05320| (D26185) clpA/clpB family
[Bacillus subtilis] >gi|2632353|emb|CAB11862| (Z99104)
class III stress response-related ATPase [Bacillus
subtilis]
Length = 810
Score = 181 bits (454), Expect = 7e-45
Identities = 102/228 (44%), Positives = 145/228 (62%), Gaps = 2/228 (0%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG+FE+R K ++ +I ILF+DE HT++ AG + EG++D +N+LKPSLA G
Sbjct: 249 AGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGA-EGAIDASNILKPSLARG 307
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++CIGATT EYRKYIE D AL RRF I V +P++ + I IL+GLR+R+EAHH V I+
Sbjct: 308 ELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSIT 367
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTM--LKEQMWSVEL 356
DDA+ AVK S +YIS+R LPD AIDL+D A S V L + + P + L++++ V
Sbjct: 368 DDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSK--VRLRSFTTPPNLKELEQKLDEVRK 425
Query: 355 EIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNIT 206
E A E EK L L+ +E+ K +E +E +T
Sbjct: 426 EKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKS---WKEKQGQENSEVT 472
>gi|399212|sp|P31541|CLAA_LYCES ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPA HOMOLOG CD4A
PRECURSOR >gi|100189|pir||A35905 CD4A protein - tomato
>gi|170433 (M32603) ATP-dependent protease (CD4A)
[Lycopersicon esculentum]
Length = 926
Score = 180 bits (453), Expect = 9e-45
Identities = 94/209 (44%), Positives = 136/209 (64%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG+FEER K L+++I+ D+ ILF+DE HT++ AGA+ EG++D N+LKP+LA G
Sbjct: 343 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAA-EGAIDAANILKPALARG 401
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++CIGATT EYRK+IE D AL RRF + VPEP++ + I IL+GLRER+E HH + +
Sbjct: 402 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLHYT 461
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
D+A+ A K S +YIS+R LPD AIDL+D A S + + L++++ + E
Sbjct: 462 DEAIEAAAKLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEK 521
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENL 263
+ EK L R DLK + L
Sbjct: 522 NEAVRGQDFEKAGELRDREMDLKAQISAL 550
>gi|4105131 (AF043539) ClpC protease [Spinacia oleracea]
Length = 891
Score = 179 bits (449), Expect = 3e-44
Identities = 109/295 (36%), Positives = 175/295 (58%), Gaps = 6/295 (2%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG+FEER K L+++I+ D+ ILF+DE HT++ AGA+ EG++D N+LKP G
Sbjct: 340 AGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAA-EGAIDRANILKPRFRRG 398
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++CIGATT EYRK+IE D AL RRF + VPEPT+ + I IL+GLRER+E HH ++ +
Sbjct: 399 ELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYT 458
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMW-SVELE 353
D+ALV A + S +YIS+R LPD AIDL+D A S + P ++ K + W E E
Sbjct: 459 DEALVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVL--------PSSLKKLESWLQHEKE 510
Query: 352 IKAIEIDYEREKTDILAA----RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ 185
++ + +EK + + + +L+ +LK ++ L E E K TE ++
Sbjct: 511 LRQL----TKEKNEAVRGQDFEKAGELRDREMDLKAQISALVEKKKEMSKAETEAGDVGP 566
Query: 184 KLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDIA-EIISRLT 8
+ + +D + + +T + ++ + + +++ V +D A + ISR
Sbjct: 567 MVTE-----SDIQHIVSSWTGIPVEKVSTDESDRLLKMEDTLHTRVIGQDEAVKAISRAI 621
Query: 7 R 5
R
Sbjct: 622 R 622
>gi|3328700 (AE001301) ClpC Protease ATPase [Chlamydia trachomatis]
Length = 854
Score = 176 bits (443), Expect = 1e-43
Identities = 105/260 (40%), Positives = 164/260 (62%), Gaps = 11/260 (4%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRGQFEER K+++ ++ +LF+DE HT+V AGA+ EG++D +++LKP+LA G
Sbjct: 275 AGTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAA-EGAIDASHILKPALARG 333
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+I+CIGATT EYRK+IE D AL RRF KI V P++ + + ILRGL++++E HH V I+
Sbjct: 334 EIQCIGATTLDEYRKHIEKDAALERRFQKIVVQPPSVDETVEILRGLKKKYEEHHNVFIT 393
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACS----------SAIVNLENESQPVTMLK 380
D+ALV A K S +Y+ R LPD AIDL+D A + S +V LE E + K
Sbjct: 394 DEALVAAAKLSDQYVHGRFLPDKAIDLLDEAGARVRVNTMGQPSDLVRLEAEIEKTKQAK 453
Query: 379 EQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNE-LIPLEESYNEEKKNITE 203
EQ + KA + E +K L ++ ++K E+ K E +P++E + + +
Sbjct: 454 EQAIGTQEYEKAASLRDEEKK---LREKLGNMKQQWESNKEEHQVPVDE------EAVAQ 504
Query: 202 LKNLKQKLEKYNKKLADAEKVRDHYTALEIK 110
+ +++ + A++EK+ T L+ K
Sbjct: 505 VVSVQTGIPAARLTEAESEKLLTLETTLQKK 535
>gi|1314297 (U40604) ClpC ATPase [Listeria monocytogenes]
Length = 825
Score = 176 bits (442), Expect = 2e-43
Identities = 99/233 (42%), Positives = 142/233 (60%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG+FE+R K ++ +I ILF+DE HT++ AG + EG++D +N+LKP LA G
Sbjct: 248 AGTKYRGEFEDRLKKVMDEIRQAGNVILFIDELHTLIGAGGA-EGAIDASNILKPPLARG 306
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++CIGATT EYRKYIE D+AL RRF I V EPT+ + I IL GLR+R+EAHH V I+
Sbjct: 307 ELQCIGATTLDEYRKYIEKDRALERRFQPIKVDEPTVEESIQILHGLRDRYEAHHRVAIT 366
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
D+AL AV+ S +YIS+R LPD AID++D + S + + V ++ + ++ E
Sbjct: 367 DEALEAAVRLSDRYISDRFLPDKAIDVIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEK 426
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNL 191
A E EK L + LK L+ ++S E K N E + L
Sbjct: 427 DAAVQGQEFEKAASLRDKEQKLKKSLD---------KKSLEETKANWQEKQGL 470
>gi|2983728 (AE000733) ATP-dependent Clp protease [Aquifex aeolicus]
Length = 810
Score = 174 bits (436), Expect = 9e-43
Identities = 116/280 (41%), Positives = 174/280 (61%), Gaps = 16/280 (5%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRGQFEER K+++K++E + ILF+DE HT+V AG++ EGS+D +NMLKP+LA G
Sbjct: 242 AGTKYRGQFEERLKNILKELEKANNVILFIDELHTLVGAGSA-EGSIDASNMLKPALARG 300
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+I+ IGATT EYRKYIE D AL RRF + V +P+ D I IL GL+ +FE H V+ +
Sbjct: 301 EIQVIGATTVDEYRKYIEKDGALERRFQPVYVEQPSPEDTIQILYGLKPKFEEFHKVEYT 360
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
+A+ AV+ S KYI++R LPD AID++D A A+V L+ T L ++ +E +I
Sbjct: 361 PEAIEKAVELSVKYITDRNLPDKAIDVMDEA--GALVKLK-----ATQLPPELKEIEEKI 413
Query: 349 KAIEIDYE---REKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKL 179
K +E + E +E+ AA+I D ++ L K T K+++
Sbjct: 414 KELEKEKEKAVKEQDYEKAAKIRDEELRL----------------RAKFETMKAKWKEEM 457
Query: 178 EKYNKKLADAE--KVRDHYTALEIKH------EILPHIHKK-----ISELESIKAV 50
EK K+ D + +V +T + +K E L HI ++ + + E+IKAV
Sbjct: 458 EKNRPKVTDEDVAEVVARWTGVPVKRVHESDAEKLLHIEEELKKRVVGQDEAIKAV 513
>gi|4376719|gb|AAD18581| (AE001626) ClpC Protease [Chlamydia pneumoniae]
Length = 845
Score = 173 bits (435), Expect = 1e-42
Identities = 100/218 (45%), Positives = 143/218 (64%), Gaps = 11/218 (5%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRGQFEER K+++ ++ +LF+DE HT+V AGA+ EG++D +N+LKP+LA G
Sbjct: 273 AGTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAA-EGAIDASNILKPALARG 331
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+I+CIGATT EYRK+IE D AL RRF KI V P++ + I ILRGL++++E HH V I+
Sbjct: 332 EIQCIGATTIDEYRKHIEKDAALERRFQKIVVHPPSVDETIEILRGLKKKYEEHHNVFIT 391
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVN----------LENESQPVTMLK 380
++AL A S +Y+ R LPD AIDL+D A + VN LE E + + K
Sbjct: 392 EEALKAAATLSDQYVHGRFLPDKAIDLLDEAGARVRVNTMGQPTDLMKLEAEIENTKLAK 451
Query: 379 EQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNE-LIPLEE 236
EQ + KA + E +K L R+ +K EN K E +P++E
Sbjct: 452 EQAIGTQEYEKAAGLRDEEKK---LRERLQSMKQEWENHKEEHQVPVDE 497
>gi|3218360|emb|CAA19619| (AL023861) clp protease ATP binding subunit [Streptomyces
coelicolor]
Length = 842
Score = 172 bits (431), Expect = 3e-42
Identities = 95/203 (46%), Positives = 134/203 (65%), Gaps = 2/203 (0%)
Query: 889 SNTQYRGQFEERFKSLVKQIES-DDKSILFVDEFHTMVSAGASNE-GSLDCTNMLKPSLA 716
+ T+YRG FEER ++V +I + D+ I+F+DE HT+V AG E GS+D N+LKP+LA
Sbjct: 276 AGTRYRGDFEERMNNIVGEIRAHSDELIIFIDELHTVVGAGGGGESGSMDAGNILKPALA 335
Query: 715 SGKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVK 536
G++ +GATT EYR+ IE D ALARRF I VPEPT +D I ILRGLR+R+EAHH V+
Sbjct: 336 RGELHIVGATTLEEYRR-IEKDAALARRFQPILVPEPTTADAIEILRGLRDRYEAHHQVR 394
Query: 535 ISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVEL 356
+D+ALV AV+ S +Y+++RRLPD AIDL+D A + + + V L+ ++ +
Sbjct: 395 YTDEALVAAVEMSDRYLTDRRLPDKAIDLIDQAGARVRLRARTKGTDVRALEREVDQLVR 454
Query: 355 EIKAIEIDYEREKTDILAARINDLK 281
+ D + E+ L RI LK
Sbjct: 455 DKDQAVADEQYEQATQLRDRIVGLK 479
>gi|116519|sp|P05444|CLPA_RHOBL CLPA HOMOLOG PROTEIN >gi|67630|pir||SURFCA ATP-dependent Clp
proteinase (EC 3.4.21.-) chain A homolog -
Rhodopseudomonas blastica >gi|45972|emb|CAA77308.1|
(Z00018) URF 2 [Rhodobacter blasticus]
Length = 793
Score = 171 bits (429), Expect = 6e-42
Identities = 77/171 (45%), Positives = 127/171 (74%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG FEER K++VK++E +ILF+DE HT++ AGA++ G++D +N+LKP+L G
Sbjct: 285 AGTRYRGDFEERLKAVVKELEDHPDAILFIDEIHTVIGAGATSGGAMDASNLLKPALQGG 344
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
K++C+G+TT+ E+R++ E D+AL+RRF KI+V EP++ D I IL GL+ FE HH ++ +
Sbjct: 345 KLRCMGSTTYKEFRQHFEKDRALSRRFQKIDVNEPSVPDAIKILMGLKPHFEEHHELRYT 404
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKE 377
DA+ AV+ + +YI++R+LPD AID++D A ++ + +++ + V KE
Sbjct: 405 ADAIKSAVELASRYINDRKLPDSAIDVIDEAGAAQHLVSDSKRKKVLGTKE 455
>gi|4103472|gb|AAD01783| (AF023422) ClpC [Lactococcus lactis]
Length = 816
Score = 170 bits (427), Expect = 1e-41
Identities = 88/225 (39%), Positives = 143/225 (63%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T++RG+FE+R ++V+++ +D I+F+DE HT++ AG + D N+LKP+LA G
Sbjct: 262 AGTKFRGEFEDRLTAIVEEVSADPDVIIFIDELHTIIGAGGGMDSVNDAANILKPALARG 321
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+ +GATT++EY+KYIE D+AL RR +INV EP+ + I IL+GLRE+FE +H VK +
Sbjct: 322 DFQMVGATTYHEYQKYIEKDEALERRLARINVDEPSPDEAIAILQGLREKFEDYHQVKFT 381
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
D A+ AV S +Y+++R+LPD AIDL+D A + + L+ + Q V L++ + E+
Sbjct: 382 DQAIKSAVTLSVRYMTSRKLPDKAIDLLDEAAARVKILLKTKKQNVFELEKDFVKAQEEL 441
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKK 215
I K D+ A+RI + + E + +++ S EEK+
Sbjct: 442 AEAVI-----KLDVKASRIKEKAV--EKISDKIYKF--SIKEEKR 477
>gi|1001555|dbj|BAA10182| (D64000) ATP-dependent Clp protease regulatory subunit [Synechocystis
sp.]
Length = 821
Score = 169 bits (425), Expect = 2e-41
Identities = 113/295 (38%), Positives = 168/295 (56%), Gaps = 18/295 (6%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG+FEER K ++ +I IL +DE HT++ AGA+ EG++D N+LKP+LA G
Sbjct: 249 AGTKYRGEFEERLKKIMDEIRQAGNIILVIDEVHTLIGAGAA-EGAIDAANILKPALARG 307
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++CIGATT EYRK+IE D AL RRF + V EP++ + I IL GLRER+E HH +KI
Sbjct: 308 ELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVEETIEILYGLRERYEQHHKLKIL 367
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
D+AL A K S +YIS+R LPD AIDL+D A S V L N P
Sbjct: 368 DEALEAAAKLSDRYISDRFLPDKAIDLIDEAGSR--VRLINSQLPPA------------- 412
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKY 170
A E+D +E IL + + ++ N++ + ELK+ + +++K
Sbjct: 413 -AKELD--KELRQILKEKDDAVR-----------------NQDFEQAGELKDREDEIKKQ 452
Query: 169 NKKLADAEKVRDHYTALEIKHEILPHI--------HKKISELESIK----------AVVT 44
+ +A ++K E+ E + HI K++E ES K ++
Sbjct: 453 IRAIASSKKAEGDNGEPEVTSEEIAHIVASWTGVPVNKLTESESEKLLHMEDTLHQRLIG 512
Query: 43 SKDIAEIISRLTR 5
+D + +SR R
Sbjct: 513 QEDAVKAVSRAIR 525
>gi|1705925|sp|P51332|CLPC_PORPU ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPA HOMOLOG
>gi|2147187|pir||S73253 Clp protease ATP-binding chain C
- Porphyra purpurea chloroplast >gi|1276798 (U38804) Clp
protease ATP binding subunit [Porphyra purpurea]
Length = 821
Score = 169 bits (424), Expect = 2e-41
Identities = 94/208 (45%), Positives = 141/208 (67%), Gaps = 15/208 (7%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG+FEER K ++ +I+S D IL +DE HT++ AGA+ EG++D N+LKP+LA G
Sbjct: 251 AGTKYRGEFEERLKRIMDEIKSADNVILVIDEVHTLIGAGAA-EGAIDAANLLKPALARG 309
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++CIGATT EYRK+IE D AL RRF + V EP++ + I IL GLR+R+E HH + +S
Sbjct: 310 ELQCIGATTLEEYRKHIEKDPALERRFHPVVVGEPSVEETIEILFGLRDRYEKHHQLTMS 369
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACS----------SAIVNLENESQPVTMLK 380
D AL A K + +YIS+R LPD AIDL+D A S A L+ E + V K
Sbjct: 370 DGALAAAAKYANQYISDRFLPDKAIDLIDEAGSRVRLLNSQLPPAARELDKELRAVLKTK 429
Query: 379 E-----QMWSVELEIKAIEIDYEREKTDILAARINDLKIHLEN 266
+ Q + + +A E++ + + I ++ N+ ++LE+
Sbjct: 430 DEAIRAQKYETAEQYRAREMEIKAQIAAIAQSKKNEPDLNLED 472
>gi|2506299|sp|P15716|CLPA_ECOLI ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPA
>gi|1651401|dbj|BAA35601| (D90725) ATP-dependent Clp
protease ATP-binding subunit ClpA. [Escherichia coli]
>gi|1787109 (AE000190) ATP-binding component of serine
protease [Escherichia coli]
Length = 758
Score = 168 bits (421), Expect = 5e-41
Identities = 77/155 (49%), Positives = 116/155 (74%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG FE+RFK+L+KQ+E D SILF+DE HT++ AGA++ G +D N++KP L+SG
Sbjct: 255 AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG 314
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
KI+ IG+TT+ E+ E D+ALARRF KI++ EP+I + + I+ GL+ ++EAHH V+ +
Sbjct: 315 KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYT 374
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSA 425
A+ AV+ + KYI++R LPD AID++D A + A
Sbjct: 375 AKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARA 409
>gi|755163 (U16134) ClpC [Synechococcus sp.]
Length = 839
Score = 168 bits (421), Expect = 5e-41
Identities = 83/153 (54%), Positives = 113/153 (73%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG+FEER K ++ +I S IL +DE HT++ AGA+ EG++D N+LKP+LA G
Sbjct: 263 AGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAA-EGAIDAANILKPALARG 321
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++CIGATT EYRK+IE D AL RRF + + EP++ D I ILRGLRER+E HH +KI+
Sbjct: 322 ELQCIGATTLDEYRKHIERDAALERRFQPVMLGEPSVDDTIEILRGLRERYEQHHKLKIA 381
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACS 431
D+AL A K + +YIS+ LPD AIDL+D A S
Sbjct: 382 DEALEAAAKLADRYISDLFLPDKAIDLIDEAGS 414
>gi|3602934|gb|AAC35595| (AF041468) Clp protease ATP binding subunit [Guillardia theta]
Length = 819
Score = 168 bits (420), Expect = 7e-41
Identities = 111/296 (37%), Positives = 163/296 (54%), Gaps = 3/296 (1%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG+FEER K ++ +I + IL +DE HT++ AGA+ EG++D N+LKP+LA G
Sbjct: 248 AGTKYRGEFEERLKKIIDEIRVANNVILVIDEVHTLIGAGAA-EGAIDAANILKPALARG 306
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++CIGATT EYRK+IE D AL RRF + V EP++ + I IL GLR+R+E HH + IS
Sbjct: 307 EMQCIGATTLEEYRKHIEKDSALERRFQPVMVGEPSVEETIEILYGLRDRYEKHHKLVIS 366
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
D+AL A K + +YI++R LPD AIDL+D A S
Sbjct: 367 DEALSAAAKFADQYIADRFLPDKAIDLIDEAGS--------------------------- 399
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKY 170
++ L N ++L P ++E + I LKQK E
Sbjct: 400 ----------------------RVRLMN--SQLPPAARELDKELREI-----LKQKDEAV 430
Query: 169 -NKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIK--AVVTSKDIAEIISRLTRI 2
++ A ++RD +EIK +I H K + E+ K +VVT +DIA+I++ T I
Sbjct: 431 RSQDFETAGQLRDR--EMEIKAQIAAIAHSKKGDEENTKEVSVVTEEDIAQIVAAWTGI 487
>gi|1352089|sp|P49574|CLPC_ODOSI ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPA HOMOLOG
>gi|1185136|emb|CAA91619| (Z67753) caseinolytic-like Clp
protease [Odontella sinensis]
Length = 885
Score = 168 bits (420), Expect = 7e-41
Identities = 95/217 (43%), Positives = 137/217 (62%), Gaps = 6/217 (2%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG+FEER K +V+++++D IL +DE HT+V AGA+ EG++D N+LKP+LA G
Sbjct: 259 AGTKYRGEFEERIKRIVEEVQNDSAIILVIDEIHTLVGAGAA-EGAVDAANILKPALARG 317
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
K +CIGATT EYRKYIE D AL RRF ++V EPT+ I IL GLR +FE HH +
Sbjct: 318 KFRCIGATTIDEYRKYIERDPALERRFQPVHVKEPTVGVTIEILLGLRSKFEEHHTLSYH 377
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTM------LKEQMW 368
D A+ A + K+I++R LPD AID++D A S V LEN P M L++ +
Sbjct: 378 DKAVEQAAILADKFIADRFLPDKAIDVLDEAGSR--VRLENRRLPRGMKRLLKELQDTLR 435
Query: 367 SVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLE 239
E IK + D ++ D +++ H+ +K ++ E
Sbjct: 436 DKEESIKEHDFDIAKQLVD----HEMEVRTHIRIMKQSILTNE 474
>gi|67629|pir||SUECCA ATP-dependent Clp proteinase (EC 3.4.21.-) chain A - Escherichia
coli >gi|145549 (M31045) ClpA protein [Escherichia coli]
Length = 758
Score = 168 bits (420), Expect = 7e-41
Identities = 84/192 (43%), Positives = 129/192 (66%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG FE+RFK+L+KQ+E D SILF+DE HT++ AGA++ G +D N++KP L+SG
Sbjct: 255 AGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSG 314
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
KI+ IG+TT+ E+ E D+ALARRF KI++ EP+I + + I+ GL+ ++E HH V+ +
Sbjct: 315 KIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEGHHDVRYT 374
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
A+ AV+ + KYI++R LPD AID++D A + A V PV+ K+ + ++E
Sbjct: 375 AKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARV------MPVSKRKKTVNVADIES 428
Query: 349 KAIEIDYEREKT 314
I EK+
Sbjct: 429 VVARIARIPEKS 440
>gi|140227|sp|P24428|CLPC_MYCLE PROBABLE ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT
>gi|44417|emb|CAA37573| (X53488) protein product
N-terminal fragment (AA 1-649) [Mycobacterium leprae]
Length = 649
Score = 164 bits (412), Expect = 6e-40
Identities = 81/151 (53%), Positives = 110/151 (72%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ ++YRG FEER K ++K+I + ILF+DE HT+V AGA+ EG++D ++LKP LA G
Sbjct: 257 AGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAA-EGAIDAASILKPKLARG 315
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++ IGATT EYRKYIE D AL RRF + V EPT+ I IL+GLR+R+EAHH V I+
Sbjct: 316 ELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSIT 375
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSA 437
D A+V A + +YI++R LPD AIDL+D A
Sbjct: 376 DSAMVAAATLADRYINDRFLPDKAIDLIDEA 406
>gi|98790|pir||S11163 ATP-dependent proteinase homolog - Mycobacterium leprae (fragment)
Length = 649
Score = 164 bits (412), Expect = 6e-40
Identities = 81/151 (53%), Positives = 110/151 (72%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ ++YRG FEER K ++K+I + ILF+DE HT+V AGA+ EG++D ++LKP LA G
Sbjct: 257 AGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAA-EGAIDAASILKPKLARG 315
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++ IGATT EYRKYIE D AL RRF + V EPT+ I IL+GLR+R+EAHH V I+
Sbjct: 316 ELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSIT 375
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSA 437
D A+V A + +YI++R LPD AIDL+D A
Sbjct: 376 DSAMVAAATLADRYINDRFLPDKAIDLIDEA 406
>gi|2113980|emb|CAB08932| (Z95557) clpC [Mycobacterium tuberculosis]
Length = 848
Score = 164 bits (410), Expect = 1e-39
Identities = 81/151 (53%), Positives = 110/151 (72%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ ++YRG FEER K ++K+I + ILF+DE HT+V AGA+ EG++D ++LKP LA G
Sbjct: 257 AGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAA-EGAIDAASILKPKLARG 315
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++ IGATT EYRKYIE D AL RRF + V EPT+ I IL+GLR+R+EAHH V I+
Sbjct: 316 ELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEAHHRVSIT 375
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSA 437
D A+V A + +YI++R LPD AIDL+D A
Sbjct: 376 DAAMVAAATLADRYINDRFLPDKAIDLIDEA 406
>gi|3323113 (AE001251) ATP-dependent Clp protease subunit A (clpA) [Treponema
pallidum]
Length = 809
Score = 163 bits (409), Expect = 1e-39
Identities = 77/155 (49%), Positives = 108/155 (69%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T++RG FEER K L +++E ++ILF+DE HT+V G+ G LD +N+LKP L+SG
Sbjct: 296 AGTKFRGDFEERLKRLAEELEKKTQAILFIDEIHTVVGTGSGGSGGLDASNLLKPLLSSG 355
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
KI+CIG+TT+ EY K+ DQALARRF KI++ EP+ + + IL G+R +E H V S
Sbjct: 356 KIRCIGSTTYEEYTKHFRKDQALARRFQKIDIEEPSEEETLRILEGIRTLYEDFHAVHYS 415
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSA 425
D+AL AV+ S +YI R LPD AID++D A + A
Sbjct: 416 DEALAAAVRLSVQYIQGRHLPDKAIDIIDEAGACA 450
>gi|1542952|emb|CAA69163| (Y07826) ClpB-homologue [Thermus thermophilus]
Length = 508
Score = 163 bits (408), Expect = 2e-39
Identities = 96/291 (32%), Positives = 166/291 (56%), Gaps = 8/291 (2%)
Query: 889 SNTQYRGQFEERFKSLVKQI-ESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K++++++ +S + ILF+DE
Sbjct: 239 AGAKYRGEFEERLKAVIQEVVQSQGEVILFIDE--------------------------- 271
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
++ IGATT EYR+ IE D AL RRF + V EPT+ + I+ILRGL+E++E HHGV+I
Sbjct: 272 --LRLIGATTLDEYRE-IEKDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRI 328
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
SD A++ A S +YI+ RRLPD AIDL+D A + + LE+ + + L+ + +E+E
Sbjct: 329 SDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDALERKKLQLEIE 388
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+A+ ++EK R+ ++ + L E+ L + E++ + +L+ + +L++
Sbjct: 389 REAL----KKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDE 444
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES-------IKAVVTSKDIAEIIS 17
+++ AE+ D A E+++ LP + ++ L ++ VT +DIAEI+S
Sbjct: 445 VRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEEDIAEIVS 503
>gi|3322841 (AE001230) ATPase (clpC) [Treponema pallidum]
Length = 814
Score = 162 bits (407), Expect = 2e-39
Identities = 91/204 (44%), Positives = 133/204 (64%), Gaps = 7/204 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRGQFEER K ++K++E +K ILF+DE HT++ AG + +GSLD NMLKP+LA G
Sbjct: 249 AGTKYRGQFEERLKRIIKEVEETEKVILFIDELHTLIGAGGT-QGSLDAANMLKPALARG 307
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+I+CIGATT EYR+Y E D AL RRF + V EP+ + TILR ++ +E HH V
Sbjct: 308 QIQCIGATTLAEYRRYFEKDAALTRRFRSVLVREPSFEETCTILRKIKSHYERHHQVIYQ 367
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
DAL V+ S++YI R PD AIDL+D + V ++Q + ++ ++ E
Sbjct: 368 SDALEKIVELSRRYIPERFFPDKAIDLMDEVGAMKRVQQRADTQVLRSFSIKVANLTTET 427
Query: 349 -KAIEI-DYEREK---TDI--LAARINDLKI 278
+AI + D+ R + TD+ L R++ LK+
Sbjct: 428 ERAIALEDWARARSLHTDVVQLRRRLHALKV 458
>gi|2633741|emb|CAB13243| (Z99111) ATP-dependent Clp protease-like [Bacillus subtilis]
Length = 699
Score = 161 bits (402), Expect = 9e-39
Identities = 95/211 (45%), Positives = 136/211 (64%), Gaps = 1/211 (0%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+NT RGQFEER K L+ +++ ILF+DE H +V AG++ EGS+D N+LKP+LA G
Sbjct: 160 ANTGIRGQFEERMKQLITELKERKNVILFIDEIHLLVGAGSA-EGSMDAGNILKPALARG 218
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++ IGATT EYR+ IE D AL RRF + V EP+I I IL+G+++++EA+HGV S
Sbjct: 219 ELQVIGATTLKEYRQ-IEKDAALERRFQPVMVQEPSIEQAILILQGIKDKYEAYHGVTFS 277
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE- 353
D+A+ V S +YI +R LPD AIDL+D A S A NL + E++ ++E E
Sbjct: 278 DEAIKACVTLSSRYIQDRHLPDKAIDLLDEAGSKA--NLLIDELNDEDAAERLTAIEAEK 335
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKN 257
KA+E E+ LAA++ D ++ LE N
Sbjct: 336 TKALE-----EENYELAAKLRDEELALEKKLN 362
>gi|512562|emb|CAA53534| (X75930) ClpC [Bacillus subtilis]
Length = 177
Score = 159 bits (398), Expect = 3e-38
Identities = 76/140 (54%), Positives = 105/140 (74%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ T+YRG+FE+R K ++ +I ILF+DE HT++ AG + EG++D +N+LKPSLA G
Sbjct: 39 AGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGA-EGAIDASNILKPSLARG 97
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+++CIGATT EYRKYIE D AL RRF I V +P++ + I IL+GLR+R+EAHH V I+
Sbjct: 98 ELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSIT 157
Query: 529 DDALVFAVKSSKKYISNRRL 470
DDA+ AVK S +YIS+R L
Sbjct: 158 DDAIEAAVKLSDRYISDRFL 177
>gi|4103474|gb|AAD01784| (AF023423) ClpB [Lactococcus lactis]
Length = 185
Score = 158 bits (395), Expect = 6e-38
Identities = 80/144 (55%), Positives = 107/144 (73%), Gaps = 1/144 (0%)
Query: 889 SNTQYRGQFEERFKSLVKQI-ESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLAS 713
+ +YRG+FEER K+++ ++ ++D + ILF+DE HT+V AG EGS+D N+LKP LA
Sbjct: 42 AGAKYRGEFEERLKAVLNEVKKADGQIILFIDELHTIVGAG-KTEGSMDAGNLLKPMLAR 100
Query: 712 GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKI 533
G++ IGATT EYRKY+E D+AL RRF K+ V EPT+ D I+ILRGL+E FE HHGV I
Sbjct: 101 GELHLIGATTLDEYRKYMETDKALERRFQKVLVTEPTVEDTISILRGLKECFEIHHGVTI 160
Query: 532 SDDALVFAVKSSKKYISNRRLPDIA 458
D+ALV A S +YI++R LPD A
Sbjct: 161 HDNALVAAATLSNRYITDRFLPDKA 185
>gi|2688774 (AE001181) ATP-dependent Clp protease, subunit C (clpC) [Borrelia
burgdorferi]
Length = 739
Score = 157 bits (393), Expect = 1e-37
Identities = 90/230 (39%), Positives = 140/230 (60%), Gaps = 13/230 (5%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
S T+YRG+FE+R +++K IE + +I+F+DE HT++ AG S EG+LD +N+LKPSL+
Sbjct: 244 SGTKYRGEFEDRLNNIIKYIEKNKNTIIFIDEIHTLIGAGNS-EGALDASNILKPSLSRA 302
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+I+ IGATT+ EYRKYI D+A ARRF I V EP D + I+ + + FE +HGV
Sbjct: 303 EIQIIGATTYNEYRKYISKDKAFARRFQTITVKEPDEKDTLKIIENIAKNFEDYHGVIYE 362
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENE----SQPVTMLKEQMWSV 362
AL+ VK S KY+ N+R PD AID++D A + L + S + ++ S+
Sbjct: 363 KSALLNIVKLSSKYLINKRFPDKAIDIIDIAGAIKKEELTKDNIITSDDIQKAINEILSI 422
Query: 361 E---------LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNI 209
+ LE+K IE + + ++ K + L E+I ++ N++ K +
Sbjct: 423 KTANNTKEEILELKEIESEINK--------KVIGQKHAVSELIKEIIKVKLGLNDDSKPL 474
Query: 208 TEL 200
T +
Sbjct: 475 TSI 477
>gi|4103470|gb|AAD01782| (AF023421) ClpE [Lactococcus lactis]
Length = 748
Score = 145 bits (362), Expect = 4e-34
Identities = 91/279 (32%), Positives = 153/279 (54%), Gaps = 2/279 (0%)
Query: 883 TQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASGKI 704
T RGQFEER + L+ +I + I+F+DE H +V AG++ +G++D N+LKP+LA G++
Sbjct: 195 TGIRGQFEERMQKLMDEIRKRNDVIMFIDEIHEIVGAGSAGDGNMDAGNILKPALARGEL 254
Query: 703 KCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKISDD 524
+ +GATT EYR IE D AL RR + V EP++ + ITILRG++ R+E +H VK +D+
Sbjct: 255 QLVGATTLNEYR-IIEKDAALERRMQPVKVDEPSVDETITILRGIQARYEDYHHVKYTDE 313
Query: 523 ALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKA 344
A+ A S +YI +R LPD AIDL+D + S + L+ +I
Sbjct: 314 AIEAAAHLSNRYIQDRFLPDKAIDLLDESGSKKNLTLKFVDPE-------------DINR 360
Query: 343 IEIDYEREKTDILAARINDLKIHLENLKNELIPL--EESYNEEKKNITELKNLKQKLEKY 170
D E +K + A + H + ++L L +E +E+ ITE K+++Q +E+
Sbjct: 361 RIADAESKKNEATKAEDFEKAAHFRDQISKLRELQKQEVTDEDMPVITE-KDIEQIVEQK 419
Query: 169 NKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVV 47
+ K ++ + + ++ H+ + ++ I +
Sbjct: 420 TQIPVGDLKEKEQTQLINLADDLKAHVIGQDEAVDKISKAI 460
Score = 37.9 bits (86), Expect = 0.097
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 17/138 (12%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLEN--LKNELIP- 245
LE QPV + + + ++ I+ YE + HL N +++ +P
Sbjct: 274 LERRMQPVKVDEPSVDETITILRGIQARYEDYHHVKYTDEAIEAAAHLSNRYIQDRFLPD 333
Query: 244 -----LEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKK 80
L+ES + KKN+T LK + E N+++ADAE ++ T E E H +
Sbjct: 334 KAIDLLDESGS--KKNLT-LKFVDP--EDINRRIADAESKKNEATKAE-DFEKAAHFRDQ 387
Query: 79 ISELESIKA---------VVTSKDIAEIISRLTRI 2
IS+L ++ V+T KDI +I+ + T+I
Sbjct: 388 ISKLRELQKQEVTDEDMPVITEKDIEQIVEQKTQI 422
>gi|2688268 (AE001142) ATP-dependent Clp protease, subunit A (clpA) [Borrelia
burgdorferi]
Length = 763
Score = 143 bits (358), Expect = 1e-33
Identities = 87/214 (40%), Positives = 127/214 (58%), Gaps = 1/214 (0%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
S T+YRG E R ++ + S K +LF+DE H +V AGA++ GS+D +N+LKP L G
Sbjct: 278 SGTKYRGDLESRVNRVLDFLSSRKKVMLFIDEIHMIVGAGATSFGSMDISNLLKPILTLG 337
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
KIK IGATT YEYRK+ D+AL RRF I + EP D IL+ +++ +E +H V+ +
Sbjct: 338 KIKFIGATTEYEYRKFFLKDKALMRRFQSIELKEPNFEDAYNILQEIKKDYERYHNVEYT 397
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
D+A+ + S+KYI +R LPD A D++D S LEN + +T K+ + + I
Sbjct: 398 DEAIQACILMSQKYIKDRFLPDKAFDILDELGSK--FKLENIKRIIT--KDDVCDLIKSI 453
Query: 349 KAIEIDYEREKTDILAARINDLKIHLEN-LKNELI 248
I + E+ D +L I+LEN +K ELI
Sbjct: 454 VGSNI-FNFEEYD------GELLINLENRIKKELI 481
>gi|1169544|sp|P42762|ERD1_ARATH ERD1 PROTEIN PRECURSOR >gi|541859|pir||JN0901 ERD1 protein -
Arabidopsis thaliana >gi|497629|dbj|BAA04506| (D17582)
ERD1 protein [Arabidopsis thaliana]
Length = 945
Score = 143 bits (357), Expect = 2e-33
Identities = 80/188 (42%), Positives = 121/188 (63%), Gaps = 11/188 (5%)
Query: 874 RGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGA---SNEGS-LDCTNMLKPSLASGK 707
RG+ E R +L+ +++ K ILF+DE HT++ +G N+GS LD N+LKPSL G+
Sbjct: 362 RGELEARVTALISEVKKSGKVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPSLGRGE 421
Query: 706 IKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKISD 527
++CI +TT E+R E D+ALARRF + + EP+ D + IL GLRE++EAHH K +
Sbjct: 422 LQCIASTTLDEFRSQFEKDKALARRFQPVLINEPSEEDAVKILLGLREKYEAHHNCKYTM 481
Query: 526 DALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNL--ENESQPVTMLKEQMWSVELE 353
+A+ AV S +YI++R LPD AIDL+D A S A + + + + +L + E
Sbjct: 482 EAIDAAVYLSSRYIADRFLPDKAIDLIDEAGSRARIEAFRKKKEDAICILSKPPNDYWQE 541
Query: 352 IKAIEIDYE-----REKTD 311
IK ++ +E R+K D
Sbjct: 542 IKTVQAMHEVVLSSRQKQD 560
>gi|4154534 (AE001442) ATP-DEPENDENT PROTEASE,ATP-BINDING SUBUNIT [Helicobacter
pylori J99]
Length = 742
Score = 142 bits (355), Expect = 3e-33
Identities = 76/221 (34%), Positives = 129/221 (57%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ +YRG FE+R K +K+I+ + + ILF+DE HT++ AG+SN GSLD N+LKP L G
Sbjct: 246 AGAKYRGDFEKRLKKTLKEIQQNGRIILFIDEIHTLLGAGSSNAGSLDAANILKPVLTDG 305
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+KC+GATTF EYR E D+A RRF +NV EP+ IL+ + +E HH V+ +
Sbjct: 306 SLKCLGATTFEEYRSVFEKDKAFNRRFSIVNVEEPSKEACYLILKNIAPLYEEHHQVRYN 365
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
+ V + Y+ ++ LPD AI+L+D S +N + + ++ +++L+I
Sbjct: 366 ESVFKACVDLTSYYMHDKFLPDKAIELLDEVGSRKKINPKKGKKISVDDVQETLALKLKI 425
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYN 227
+ ++ +++ A + +L+ ++LKN++ E+ N
Sbjct: 426 PKMRLNSDKK------ALLRNLE---KSLKNKIFAQTEAIN 457
>gi|4336198|gb|AAD17691| (AF076664) ATP-dependent protease ClpE [Listeria monocytogenes]
Length = 728
Score = 136 bits (340), Expect = 2e-31
Identities = 96/232 (41%), Positives = 133/232 (56%), Gaps = 4/232 (1%)
Query: 874 RGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASGKIKCI 695
RGQFEER K L+K+++ +ILF+DE HT+V AG S EGS+D N+LKP+LA G ++ I
Sbjct: 187 RGQFEERMKQLIKELQERKNTILFIDEVHTIVGAG-SAEGSMDAGNILKPALARGDLQMI 245
Query: 694 GATTFYEYRKYIENDQALARRFVK--INVPEPTISDGITILRGLRERFEAHHGVKISDDA 521
GATT EYR IE D AL RRF N L GL+ ++E H V S +A
Sbjct: 246 GATTLKEYRT-IEKDAALERRFQSRTSNCNRTIHKRNANYLNGLKPKYEDFHEVVYSPEA 304
Query: 520 LVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE-IKA 344
L AV+ S +YI +R LPD AIDL+D S NL E + E++ +E E IKA
Sbjct: 305 LTAAVELSARYIQDRHLPDKAIDLMDEVGSK--YNLSIEKLDENTVSERVARLEDEKIKA 362
Query: 343 IEI-DYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKL 179
+++ DYE+ AA++ D LE +N+ IP + + + + + L K L
Sbjct: 363 LQMEDYEK------AAKVRDEITRLE--ENKTIPSQNALSYKHQTYKRLLQEKTGL 410
>gi|871784 (L34677) Clp-like ATP-dependent protease binding subunit [Bos
taurus]
Length = 586
Score = 136 bits (338), Expect = 3e-31
Identities = 95/280 (33%), Positives = 151/280 (53%), Gaps = 10/280 (3%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNE--GSLDCTNMLKPSLA 716
+ TQYRG FEE + L+ +++ D ILF DE H ++ AG + + GS ++LKP+L+
Sbjct: 156 AGTQYRGSFEENMQKLIDEVKKDGNVILFFDEIHQIIGAGNAGDASGSKGMADILKPALS 215
Query: 715 SGKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVK 536
G++ IGATT EYR I D AL+RRF ++ V P+ D IL+GLR+ +E HH V
Sbjct: 216 RGEVTLIGATTQDEYRNTILKDAALSRRFNQVTVNAPSKEDTFKILQGLRKLYEKHHNVS 275
Query: 535 ISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVEL 356
+ D+ L A+ S +YI R LPD AIDL+D + PV K ++E
Sbjct: 276 LPDEVLKAAIDYSVQYIPQRSLPDKAIDLIDVTAAHLA-----SKHPVKDAK----TIEE 326
Query: 355 EIKAIEIDYER--EKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK 182
EIK E + EK D AA+ + K + L+++L + ++E ++ + ++
Sbjct: 327 EIKKTEAKQQEAVEKEDYQAAQ--EAKDQVAKLQDQL----KDHSESERVVATPSDVAAA 380
Query: 181 LEKY------NKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAV 50
+E+ +D E+++ T LE K I + E+++AV
Sbjct: 381 VERMTGIPVSKMGASDIERLKGLATRLE---------GKVIGQQEAVEAV 421
>gi|2313108|gb|AAD07102| (AE000525) ATP-dependent C1p protease (clpA) [Helicobacter pylori
26695]
Length = 741
Score = 136 bits (338), Expect = 3e-31
Identities = 87/261 (33%), Positives = 132/261 (50%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASG 710
+ +YRG FE+R K +K+I+ + + ILF+DE HT++ G+SN GSLD N+LKP L G
Sbjct: 245 AGAKYRGDFEKRLKKTLKEIQQNGRIILFIDEIHTLLGTGSSNAGSLDAANILKPVLTDG 304
Query: 709 KIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKIS 530
+KC+GATTF EYR E D+A RRF I V EP+ IL+ + +E HH V+
Sbjct: 305 SLKCLGATTFEEYRSVFEKDKAFNRRFSVIKVEEPSKEACYLILKKIAPLYEEHHQVRYD 364
Query: 529 DDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI 350
+ V + Y+ ++ LPD AI+L+D S ++ +
Sbjct: 365 ESVFKACVDLTSDYMHDKFLPDKAIELLDEVGSRKKISPKKG------------------ 406
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKY 170
K I +D +E LA ++ K+ L + K L L+NL++ L+
Sbjct: 407 KKIGVDDVKE---TLALKLKIPKMRLSSDKKAL----------------LRNLEKSLK-- 445
Query: 169 NKKLADAEKVRDHYTALEIKH 107
NK A AE + A++I+H
Sbjct: 446 NKIFAQAEAISLVSNAIKIQH 466
>gi|1168974|sp|Q06716|CLPL_LACLA ATP-DEPENDENT PROTEASE ATP-BINDING SUBUNIT CLPL
>gi|486816|pir||S35908 ATP-dependent Clp proteinase (EC
3.4.21.-) chain clpL - Lactococcus lactis subsp. lactis
plasmid pUCL22 >gi|296464|emb|CAA44207| (X62333) ATPase
[Lactococcus lactis]
Length = 763
Score = 129 bits (321), Expect = 3e-29
Identities = 87/238 (36%), Positives = 139/238 (57%), Gaps = 19/238 (7%)
Query: 889 SNTQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGA-SNEGSLDCTNMLKPSLAS 713
+ TQYRG FEE K LV+++++ ILF+DE H ++ GA + E +++KP L
Sbjct: 222 AGTQYRGSFEENIKQLVEEVKAAGNIILFIDEIHQILGTGALAGEEVKGLADIIKPLLCH 281
Query: 712 -GKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVK 536
K+ IGATT EYR I + ALARRF + + EPT +D + IL+G++E +E HH V
Sbjct: 282 VAKLSVIGATTQDEYRNTILKNAALARRFNDVVINEPTAADTLRILQGIKELYEKHHHVV 341
Query: 535 ISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTM---------- 386
+ DD AV S KYI NR LPD AIDL+D S + N + + + +
Sbjct: 342 LPDDEKKAAVDYSIKYIHNRHLPDKAIDLIDDCGSFSGKNSQTDVETLDQRLKNKRQLRR 401
Query: 385 --LKEQMWSVELEIKAIEIDYERE-----KTDILAARINDLKIHLENLKNELIPLEESYN 227
+K + ++ +IK ++ +++ + + + A I+D+ +E L IP+ +
Sbjct: 402 PAIKSEDFAKAADIKRVDRGTKQKIKKTHQKEKITATIDDVAQSVERLTG--IPVSDM-- 457
Query: 226 EEKKNITELKNLKQKLE 176
+I LKNL ++L+
Sbjct: 458 -GANDIEHLKNLDKRLK 473
>gi|1651405|dbj|BAA35606| (D90726) ATP-dependent Clp protease ATP-binding subunit ClpA.
[Escherichia coli]
Length = 472
Score = 124 bits (308), Expect = 9e-28
Identities = 57/122 (46%), Positives = 89/122 (72%)
Query: 790 HTMVSAGASNEGSLDCTNMLKPSLASGKIKCIGATTFYEYRKYIENDQALARRFVKINVP 611
HT++ AGA++ G +D N++KP L+SGKI+ IG+TT+ E+ E D+ALARRF KI++
Sbjct: 2 HTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDIT 61
Query: 610 EPTISDGITILRGLRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACS 431
EP+I + + I+ GL+ ++EAHH V+ + A+ AV+ + KYI++R LPD AID++D A +
Sbjct: 62 EPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGA 121
Query: 430 SA 425
A
Sbjct: 122 RA 123
>gi|1575013 (U51235) ClpB [Mycoplasma capricolum]
Length = 495
Score = 96.0 bits (235), Expect = 3e-19
Identities = 59/178 (33%), Positives = 103/178 (57%), Gaps = 6/178 (3%)
Query: 535 ISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVEL 356
I +ALV A K S +YI++R LPD AIDLVD AC+S L + + + ++ +E+
Sbjct: 1 IHHNALVSAAKLSSRYITDRYLPDKAIDLVDEACASIKTELASIPIELDQVNRKVMQLEI 60
Query: 355 EIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
E A+ E+EK D R + K L++LK E L + + +EK+ ++++ +K +E
Sbjct: 61 ETSAL----EKEKDDKSKERWQEAKKELDSLKIEQATLNKKWEKEKEELSKINLVKSSIE 116
Query: 175 KYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES------IKAVVTSKDIAEIISR 14
++L A+ ++ A EIK+ +LP + K ++ E+ I VT ++IA+++S+
Sbjct: 117 NLKQELETAQNDGNYKRAGEIKYSLLPSLEKSLALFETQTGAKMISEEVTEQEIAKVVSK 176
Query: 13 LTRI 2
T I
Sbjct: 177 STGI 180
>gi|2983243 (AE000699) chromosome assembly protein homolog [Aquifex aeolicus]
Length = 1156
Score = 50.8 bits (119), Expect = 1e-05
Identities = 59/271 (21%), Positives = 129/271 (46%), Gaps = 16/271 (5%)
Query: 868 QFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPS---LASGKIKC 698
+++ +F+ +VK + D L V+ F + + G N + L + G +K
Sbjct: 596 EYDPKFEKVVKFVFGDT---LIVENFESAKAIGIGNYRMVTLEGELFEKSGVITGGAVKP 652
Query: 697 IGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKISDDAL 518
G ++Y E + ++N E + + +I++ KI +
Sbjct: 653 SGELN----KRYYEEE------LQRLNAEEEKLKNEESIIQK-----------KIREIRN 691
Query: 517 VFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAI- 341
+ + K++ +S R++ +++ + ++ LEN + + +L+E++ +VE ++K +
Sbjct: 692 LISEKTALLKVSERKIEELSSEGLEQYEEKFKEKLENSKEYLKILEEKLLNVEDKLKELA 751
Query: 340 -EIDYEREKTDILAARINDLKIH-----LENLKNELIPLEESYNEEKKNITELKNLKQK- 182
EI+Y EK + L + D+K H +E + E + + +E +K++ E++ K
Sbjct: 752 EEIEYYEEKLNNLKLKEGDIKRHYSREGVEEKRREYSKVRKQVSEIEKSLNEIERELNKK 811
Query: 181 ---LEKYNKKLADAEKVRDHYT--ALEIKHEILPHIHKKISELESIK 56
LE K++ + E+ R++ T +K EI I K L+ +K
Sbjct: 812 TYELEYLEKEIQEKEREREYLTERIKSLKKEIENLILFKEKTLQEVK 858
Score = 42.6 bits (98), Expect = 0.004
Identities = 35/120 (29%), Positives = 66/120 (54%), Gaps = 12/120 (10%)
Query: 361 ELEIKAIEIDYEREKTDILAARINDLKIHLENL----KNELIPLEES------YNEEKKN 212
ELE EI + + + L RI LK +ENL + L ++E+ Y ++K+
Sbjct: 814 ELEYLEKEIQEKEREREYLTERIKSLKKEIENLILFKEKTLQEVKEAEVKVYDYIKQKEE 873
Query: 211 I-TELKNLKQKLEKYNKKLAD-AEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSK 38
+ E+ NLK KL K K + EK+ + L++ E + ++++++ E E +K +
Sbjct: 874 LEKEILNLKSKLGKLKIKEEELKEKIFEKEKNLKVLEEKIENLNEELKEYEDLKLGADEE 933
Query: 37 DIAEIISRLTRI 2
I ++ +L R+
Sbjct: 934 SIPKLKEKLKRV 945
Score = 36.4 bits (82), Expect = 0.29
Identities = 31/90 (34%), Positives = 56/90 (61%), Gaps = 30/90 (33%)
Query: 412 ENESQPVTMLKEQMWSVEL---EIKAIEIDYER--EKTDILAARINDLKIHLENLKNELI 248
E E + + L+E+ +++ E+K +E + E+ EK + L +L+I NLKN++
Sbjct: 360 EVEREKLRELEEEEERLKITFDEVKKLEEEKEKLTEKLNSLNKEKQELEIQRANLKNKIE 419
Query: 247 PLEESYNE-------------------------EKKNITELKNLKQKLEKYNKKLADAEK 143
++E N+ +KK EL+NL Q+L Y K+L++ K
Sbjct: 420 RIKEDINKLISEREEKIKEIKEKEQEIKRLKAIKKKEEEELRNLTQELNIYEKRLSEVRK 479
Score = 32.1 bits (71), Expect = 5.6
Identities = 30/109 (27%), Positives = 56/109 (50%), Gaps = 17/109 (15%)
Query: 361 ELEIKAIEIDYEREKTDILAARINDLKIHLENLKN------------ELIPLEESYNEEK 218
E+E+K EID E+ R+ + K LE K L E+ E +
Sbjct: 185 EVELKIKEIDLILEEISNQLKRLKEEKEKLEKFKELQRIKRETEAKILLKEKEKLLKERE 244
Query: 217 KNITELKNLKQKLEKYNKKLADAEKVRDHYTAL--EIKHEILP---HIHKKISELESIKA 53
+ + EL +L++ LE ++ + EK + L E+ +I+P + K +E+E+ +
Sbjct: 245 RILNELSSLRESLEDITFQIQENEKELNERERLLKEVNEKIMPFKEKVGKFTAEIENAER 304
Query: 52 VVTSKD 35
+ K+
Sbjct: 305 SIKEKE 310
>gi|1280089 (U55369) weak similarity to myosin heavy chain [Caenorhabditis
elegans]
Length = 1091
Score = 49.6 bits (116), Expect = 3e-05
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 505 KSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVE--LEIKAIEID 332
K+ KKY + A DL D ++ I++ ES+ M KE +E L+ E++
Sbjct: 677 KADKKYEETKVQLREAEDLADRLQAAQILSGNVESKFSDMQKESKIEMERILDNHNKELE 736
Query: 331 YEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNK-KLA 155
RE+ L+ LE +NEL L++ EEK+ + L L QK+EK K K
Sbjct: 737 KLREELKKSHTEHTSLESVLEEQQNELAQLQDQLREEKEQSSNLLVLNQKIEKSEKEKER 796
Query: 154 DAEKVRDHYTALEIKHEILPHIHKKISEL 68
E++R H + + + + KISEL
Sbjct: 797 LEEQIRSHTSQNSDTSKTISDLEDKISEL 825
>gi|2129174|pir||A64505 P115 homolog - Methanococcus jannaschii
Length = 1169
Score = 48.0 bits (112), Expect = 9e-05
Identities = 59/227 (25%), Positives = 117/227 (50%), Gaps = 34/227 (14%)
Query: 694 GATTFYEYRKYIENDQALARRFVK-INVPEPTISDGITILRGLRERFEAHHGVKISDD-- 524
G F E +K E + AR ++ I++ + + + L+ +E+ +A +K++++
Sbjct: 170 GIAEFDEKKKKAEEELKKARELIEMIDIRISEVENNLKKLK--KEKEDAEKYIKLNEELK 227
Query: 523 ALVFAVKSSKKYISNRRLPDIAIDLVD---------SACSSAIVNLENESQPVTML---- 383
A +A+ K N L +I D+ + S V +EN + +
Sbjct: 228 AAKYALILKKVSYLNVLLENIQNDIKNLEELKNEFLSKVREIDVEIENLKLRLNNIINEL 287
Query: 382 ----KEQMWSVELEIKAIEIDYEREKTDILAARINDLK---IHLENLKNELIPLEESYNE 224
E++ + IK +E++ E +K +L + IN+LK + +EN K E+ ++ E
Sbjct: 288 NEKGNEEVLELHKSIKELEVEIENDKK-VLDSSINELKKVEVEIENKKKEIKETQKKIIE 346
Query: 223 EKKNITE-----------LKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKI 77
+ +I E +KNL + E+ + +A++E + H E+ EI I K
Sbjct: 347 NRDSIIEKEQQIKEIEEKIKNLNYEKERLKEAIAESESIIKHLKESEM--EIADEIAKNQ 404
Query: 76 SELESIKAVVTSKDIAEIISR 14
+EL +K + D+ +I+R
Sbjct: 405 NELYRLKKEL--NDLDNLINR 423
Score = 34.0 bits (76), Expect = 1.4
Identities = 36/111 (32%), Positives = 59/111 (52%), Gaps = 8/111 (7%)
Query: 361 ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK 182
ELE+K +I E E+ ++ I + +E+ NELI E E K +NLK+
Sbjct: 743 ELELKNKDILEELEELNLKREEILNRINEIESKINELIERREKIINELKEYESDENLKRM 802
Query: 181 LE-KYNKKLADAEKVR---DHYTALEIKHEIL----PHIHKKISELESIKAVVTSKDIA 29
E + K+ + EK + + L + EIL ++KK+SEL + K V+ K+I+
Sbjct: 803 NEIEGELKILEKEKAKLKNEIDKGLTLVKEILIPKIEELNKKVSELIN-KKVILEKNIS 860
>gi|2826443 (U67604) chromosome segretation protein (smc1) [Methanococcus
jannaschii]
Length = 1169
Score = 48.0 bits (112), Expect = 9e-05
Identities = 59/227 (25%), Positives = 117/227 (50%), Gaps = 34/227 (14%)
Query: 694 GATTFYEYRKYIENDQALARRFVK-INVPEPTISDGITILRGLRERFEAHHGVKISDD-- 524
G F E +K E + AR ++ I++ + + + L+ +E+ +A +K++++
Sbjct: 170 GIAEFDEKKKKAEEELKKARELIEMIDIRISEVENNLKKLK--KEKEDAEKYIKLNEELK 227
Query: 523 ALVFAVKSSKKYISNRRLPDIAIDLVD---------SACSSAIVNLENESQPVTML---- 383
A +A+ K N L +I D+ + S V +EN + +
Sbjct: 228 AAKYALILKKVSYLNVLLENIQNDIKNLEELKNEFLSKVREIDVEIENLKLRLNNIINEL 287
Query: 382 ----KEQMWSVELEIKAIEIDYEREKTDILAARINDLK---IHLENLKNELIPLEESYNE 224
E++ + IK +E++ E +K +L + IN+LK + +EN K E+ ++ E
Sbjct: 288 NEKGNEEVLELHKSIKELEVEIENDKK-VLDSSINELKKVEVEIENKKKEIKETQKKIIE 346
Query: 223 EKKNITE-----------LKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKI 77
+ +I E +KNL + E+ + +A++E + H E+ EI I K
Sbjct: 347 NRDSIIEKEQQIKEIEEKIKNLNYEKERLKEAIAESESIIKHLKESEM--EIADEIAKNQ 404
Query: 76 SELESIKAVVTSKDIAEIISR 14
+EL +K + D+ +I+R
Sbjct: 405 NELYRLKKEL--NDLDNLINR 423
Score = 34.0 bits (76), Expect = 1.4
Identities = 36/111 (32%), Positives = 59/111 (52%), Gaps = 8/111 (7%)
Query: 361 ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK 182
ELE+K +I E E+ ++ I + +E+ NELI E E K +NLK+
Sbjct: 743 ELELKNKDILEELEELNLKREEILNRINEIESKINELIERREKIINELKEYESDENLKRM 802
Query: 181 LE-KYNKKLADAEKVR---DHYTALEIKHEIL----PHIHKKISELESIKAVVTSKDIA 29
E + K+ + EK + + L + EIL ++KK+SEL + K V+ K+I+
Sbjct: 803 NEIEGELKILEKEKAKLKNEIDKGLTLVKEILIPKIEELNKKVSELIN-KKVILEKNIS 860
>gi|2674350 (U93121) M-phase phosphoprotein-1 [Homo sapiens]
Length = 753
Score = 48.0 bits (112), Expect = 9e-05
Identities = 50/219 (22%), Positives = 102/219 (45%), Gaps = 6/219 (2%)
Query: 661 IENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKISDDALVFAVKSSKKYIS 482
+E +AL+ + + I + TIL ++ E H K+ D L K S
Sbjct: 76 VEGKRALSELTQGVTCYKAKIKELETILE--TQKVERSHSAKLEQDILE---KESIILKL 130
Query: 481 NRRLPDIAIDLVDSACSSAIVNLENES--QPVTMLKEQMWSVE--LEIKAIEIDYEREKT 314
R L + L DS ++ +N++ + +T L + ++ L++K E + R++T
Sbjct: 131 ERNLKEFQEHLQDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQLKEEEEETNRQET 190
Query: 313 DILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEK-VR 137
+ L ++ +NLK +L EE Y + K+ +T+ K ++++K + D +K +R
Sbjct: 191 EKLKEELSASSARTQNLKADLQRKEEDYADLKEKLTDAKKQIKQVQKEVSVMRDEDKLLR 250
Query: 136 DHYTALE-IKHEILPHIHKKISELESIKAVVTSKDIAEIISRLTR 5
LE K++ + K ++ +K + ++ + E I + R
Sbjct: 251 IKINELEKKKNQCSQELDMKQRTIQQLKEQLNNQKVEEAIQQYER 295
>gi|2983515 (AE000718) hypothetical protein [Aquifex aeolicus]
Length = 978
Score = 46.1 bits (107), Expect = 3e-04
Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 415 LEN-ESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLE 239
LEN +++ ++ LK E E + I+ + + A +IN LK +E L+NE+ L
Sbjct: 498 LENVDAEGISELKHAKELKEKEEREIDTTLK-----LYAQKINSLKEEMEKLRNEVEELR 552
Query: 238 ----ESYNEEKKNITELKNLKQKLE----KYNKKLADAEKVRDHYTALEIKHEILPHIHK 83
E+ E K + EL+ K+KLE KY K L D +K K E +HK
Sbjct: 553 KEIPENLKERIKKLEELRIEKEKLEHKLNKYRKALEDRQKQ---------KEEAQAKLHK 603
Query: 82 KISELESIKAVVTSK 38
+ELE +K + K
Sbjct: 604 AQTELELLKEKIREK 618
Score = 35.6 bits (80), Expect = 0.49
Identities = 38/136 (27%), Positives = 69/136 (49%), Gaps = 15/136 (11%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEI--DYEREKTDILAA--RINDLKIHLENLKNEL- 251
L+N + + LKE + E+K E ERE + ++ + +L+ +E L+ +L
Sbjct: 209 LKNLEEELKELKETEEKLRQELKKAEEKDSLERELSQVVTKLKELENLEKEVEKLREKLE 268
Query: 250 --------IPLEESYNEEKKNITELKNLKQKLEKYNKKLAD-AEKVRDHYTALEIKHEIL 98
+P+ + E K +TELK K KL K L D ++ +E + E
Sbjct: 269 FSRKVAPYVPIAKRIEEIDKKLTELKVRKNKLTKELAVLKDELSFAQEELNRIEAEKEKF 328
Query: 97 PHIHKKISELE-SIKAVVTSKDIAEIISRLT 8
++ ELE +K + K+I + +S+L+
Sbjct: 329 KEEKEREKELEHRLKKLQEIKEILKELSQLS 359
>gi|3845272 (AE001417) hypothetical protein [Plasmodium falciparum]
Length = 980
Score = 43.4 bits (100), Expect = 0.002
Identities = 46/155 (29%), Positives = 81/155 (51%), Gaps = 8/155 (5%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENE--SQPVTMLKEQMWSVELEIKAIEIDYE- 326
KK I+N +L + + ++ + ENE ++ V L+ ++ EL+ K I D E
Sbjct: 319 KKEINNIKLMEKQNVIKNNEQLLKDIKDENEKMNEHVNKLQNELIKRELQNKCISKDIEF 378
Query: 325 --REKTDILAARINDL---KIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKK 161
+EK D + +DL K +ENLK+ELI +++ ++ E+ L K+E+ N+
Sbjct: 379 CKKEKEDKIKNLEDDLLEKKKCIENLKDELINIKKKMEDKMHMTNEMDLLSNKVEELNRI 438
Query: 160 LADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDI 32
EK +E+ +E L I KK+++ E +K K+I
Sbjct: 439 NKTYEK-----NIVELNNE-LDVIKKKLNDEEFLKEEEKKKNI 475
Score = 34.8 bits (78), Expect = 0.84
Identities = 38/132 (28%), Positives = 61/132 (45%), Gaps = 11/132 (8%)
Query: 454 DLVDSACSSAIVNLENES---QPVTMLKEQMWSVELEIKAIEIDYE-------REKTDIL 305
++ D S I+ ENE + V K + + E+K I +Y+ +E DI
Sbjct: 577 NVCDMNLQSQILIKENEKHMQEKVEEYKNLLKQKDQELKNIIQEYDERIEIQNKEMEDI- 635
Query: 304 AARINDLKIHLENLKNELIPLEESYN-EEKKNITELKNLKQKLEKYNKKLADAEKVRDHY 128
+ND + L+ K L + N N+ +NLK+K +K N + D EK ++
Sbjct: 636 ---VNDCEEKLKQAKINNKKLTTATNMANNNNMLMDENLKEKDKKINDLMKDMEKKKEEI 692
Query: 127 TALEIKHEILPHIHKKISELESI 59
L + L H H KI S+
Sbjct: 693 NKLVEEKSKLEHSHVKIQNEMSL 715
>gi|1514671|emb|CAA68905| (Y07624) nuclear/mitotic apparatus protein [Xenopus laevis]
Length = 2253
Score = 43.0 bits (99), Expect = 0.003
Identities = 30/94 (31%), Positives = 50/94 (52%)
Query: 433 SSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNE 254
S+ +V+ EN LK+Q+ SVE ++ + E+EKT A+ DLK + +L+ E
Sbjct: 691 SNELVSEENSK-----LKDQLLSVEESLRHLREHLEKEKTKFAASLDADLK-RISHLEEE 744
Query: 253 LIPLEESYNEEKKNITELKNLKQKLEKYNKKLAD 152
+ L ES +E N+ E + +K+E K L +
Sbjct: 745 MKKLSESRDEALHNLDEERTAGKKIESQLKHLEE 778
>gi|2293014|emb|CAA71688| (Y10687) purine NTPase [Sulfolobus acidocaldarius]
Length = 886
Score = 42.6 bits (98), Expect = 0.004
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 21/138 (15%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYERE---KTDILAARINDLKIHLENLKNELIP 245
L+NE + ++ ++ + K + IDY E +DIL I + + L L ++L
Sbjct: 522 LQNEILSLLSYHQEFENIAEKEKEL-IDYHEEYLKNSDILEEDIQEQEQRLNELNSKLSE 580
Query: 244 LEESYNEEKKNI----TELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEI-----LPH 92
LE+SYN+ K +LK+L E+ +++++ EK++ Y L K EI L
Sbjct: 581 LEKSYNDYKAKYQFLPADLKSLVSLEERIRRRISELEKLKIEYERL--KEEITRMKGLKE 638
Query: 91 IHKKISELESIKAVVTS---------KDIAEIISRLTRI 2
++K+ E E S K + EII +L++I
Sbjct: 639 EYEKLKEEEDALLNRISELGYSEKRYKQLEEIIDKLSKI 677
>gi|3551509|dbj|BAA33010| (AB016784) RET-II [Mus musculus]
Length = 729
Score = 42.6 bits (98), Expect = 0.004
Identities = 29/122 (23%), Positives = 63/122 (50%), Gaps = 1/122 (0%)
Query: 406 ESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYN 227
++Q + L+E++ + +K + Y++ +++ AAR+N +++ +NL + E Y+
Sbjct: 341 QNQALQTLQERLHEADATLKREQESYKQMQSEF-AARLNKMEVDRQNLAEAVTLAERKYS 399
Query: 226 EEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALE-IKHEILPHIHKKISELESIKAV 50
EEKK + EL+ ++V+ H +LE K E++ + K L+S + +
Sbjct: 400 EEKKKVDELQ----------------QQVKLHRASLESAKQELVDYKQKATRILQSKEKL 443
Query: 49 VTS 41
+ S
Sbjct: 444 INS 446
>gi|3211974 (AF067807) paramyosin related protein [Echinococcus granulosus]
Length = 601
Score = 41.0 bits (94), Expect = 0.011
Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Query: 385 LKEQMWSVELEIKAIEIDYE--REKTDILAARINDLKIH--LENL-KNELIPLEESYNEE 221
LK+ + S+E +I + E ++K ++L R +I+ LENL K E L + +
Sbjct: 338 LKDALASMENQITGLLNGNELLKKKIEMLETRAETKEINTKLENLLKTETQELLTTIKDL 397
Query: 220 KKNITE----LKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKA 53
+TE +K LK++LEK K++ DAE + D K++I+ + K I++L K
Sbjct: 398 DSKLTESGEEVKELKKQLEKAEKQIRDAEVLTDE------KNKIIEEMKKTINKLSETKK 451
Query: 52 VVTSKD 35
V K+
Sbjct: 452 EVEDKN 457
>gi|4191344 (AF085199) golgin-84 [Homo sapiens]
Length = 731
Score = 41.0 bits (94), Expect = 0.011
Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 406 ESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYN 227
++Q + L+E++ + +K + Y++ +++ AAR+N +++ +NL + E Y+
Sbjct: 343 QNQALQTLQERLHEADATLKREQESYKQMQSEF-AARLNKVEMERQNLAEAITLAERKYS 401
Query: 226 EEKKNITEL----KNLKQKLEKYNKKLAD 152
+EKK + EL K K LE ++L D
Sbjct: 402 DEKKRVDELQQQVKLYKLNLESSKQELID 430
Score = 35.6 bits (80), Expect = 0.49
Identities = 52/221 (23%), Positives = 105/221 (46%), Gaps = 17/221 (7%)
Query: 691 ATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKISDDALVF 512
AT E Y + A R K+ + +++ IT L ER + ++ D L
Sbjct: 359 ATLKREQESYKQMQSEFAARLNKVEMERQNLAEAIT----LAERKYSDEKKRV--DELQQ 412
Query: 511 AVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMW----------SV 362
VK K + + + +L+D + + L+++ + + LKE S+
Sbjct: 413 QVKLYKLNLESSKQ-----ELIDYKQKATRI-LQSKEKLINSLKEGSGFEGLDSSTASSM 466
Query: 361 ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKN----ITELKN 194
ELE E + +RE+ L +I+ L+ L++++ + + ES E+ ++ I K
Sbjct: 467 ELEELRHEKEMQREEIQKLMGQIHQLRSELQDMEAQQVNEAESAREQLQDLHDQIAGQKA 526
Query: 193 LKQKLEKYNKKLADAEKVRDHYTALEI---KHEILPHIHKKISELESIKAVVTSKDIA 29
KQ+LE ++L K HY ++ K+ + I + E++ ++ +T+K ++
Sbjct: 527 SKQELETELERL----KQEFHYIEEDLYRTKNTLQSRIKDRDEEIQKLRNQLTNKTLS 580
>gi|2664236|emb|CAA15821| (AL009227) coiled coil protein [Schizosaccharomyces pombe]
Length = 750
Score = 41.0 bits (94), Expect = 0.011
Identities = 35/135 (25%), Positives = 63/135 (45%), Gaps = 2/135 (1%)
Query: 427 AIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDI--LAARINDLKIHLENLKNE 254
A L E P++ +++ E ++ +E YE +++ L+ +NDL+ ENLK++
Sbjct: 69 AFQKLLQEKTPLSSIQDLEGFREF-MENLEHRYEMTVSEVRRLSHEVNDLQTDRENLKHQ 127
Query: 253 LIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKIS 74
E N E N L + QK ++ K + ++ + +LE I + IS
Sbjct: 128 FEDQIEKLNSEISNQNSL--ILQKKDELEKSIQRCSELEEKINSLESAQSIEQEV---IS 182
Query: 73 ELESIKAVVTSKDIAEI 23
L+ K V T D+ E+
Sbjct: 183 SLKDDKTVETKNDVPEV 199
Score = 34.8 bits (78), Expect = 0.84
Identities = 44/212 (20%), Positives = 88/212 (40%), Gaps = 5/212 (2%)
Query: 676 EYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKISDDA-LVFAVKS 500
E R+ I ND + K + + +D T+L + F HH + ++D LVF
Sbjct: 274 EERRDIANDDLIVNANAKEPMHHFSFTDLDTLLNWPKYVFH-HHKIHLADTIPLVFLDLK 332
Query: 499 SKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYERE 320
K+Y + P + V L +Q+ E +K E
Sbjct: 333 PKEYTVDLETPKL----------------------VEELTKQLHVAESTLK--------E 362
Query: 319 KTDILAARINDLKIHLENLKNELIPLEESYNEEKKNI----TELKNLKQKLEKYNKKLAD 152
++ LK ++NL + + L+ +E ++N+ + + ++++ +K KKL D
Sbjct: 363 NSEKFKQNSESLKSRVDNLNDYITKLQNEIDECRRNLLWAESSCETIREENQKNIKKLND 422
Query: 151 AEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTS 41
AE ++ L+ + ++ + I+ +K +TS
Sbjct: 423 AESLKSR--LLQSRTQMQTELDSYITSNSQLKDEITS 457
>gi|2649004 (AE000995) chromosome segregation protein (smc1) [Archaeoglobus
fulgidus]
Length = 1156
Score = 41.0 bits (94), Expect = 0.011
Identities = 33/134 (24%), Positives = 75/134 (55%)
Query: 424 IVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIP 245
++++E + + + +EQ+ S ++ K + +D +++ D + I + K +E + +EL
Sbjct: 810 LISIEKKIESLEFKREQLES-SMQEKQVYLDEIKDRIDEIRRTIEEGKARVEEINSEL-- 866
Query: 244 LEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELE 65
EE EE++ ELK L+++ ++ K+L +AE+ + +I+ EI + ++I +L+
Sbjct: 867 -EELRKEERELGKELKGLRKERDELIKQLRNAEEEK-----RKIEAEI-DRLEERI-KLQ 918
Query: 64 SIKAVVTSKDIAEI 23
+ + +IAEI
Sbjct: 919 KERLEIAESEIAEI 932
Score = 33.6 bits (75), Expect = 1.9
Identities = 35/107 (32%), Positives = 57/107 (52%), Gaps = 8/107 (7%)
Query: 322 EKTDILAARINDLKIHLENLKNELIPLEE--SYNEEKKNITELKN----LKQKLEKYNKK 161
EK + + A +ND LE +NE I +E S EE + N +K K EK ++
Sbjct: 180 EKLEAVIAEVNDRLQTLERDRNEAIRYKEILSKKEEYEGYLRAHNYLTAVKSK-EKVERE 238
Query: 160 LADAEKVRDHYTAL--EIKHEILPHIHKKISELESIKAVVTSKDIAEIISRLTRI 2
L E+ +D T+ EI I +++KI+EL + + + + AEI SR+ +
Sbjct: 239 LERLERQKDELTSKIPEINARI-AELNEKINELAAKISELGDERSAEIQSRILEL 292
Score = 33.2 bits (74), Expect = 2.5
Identities = 39/127 (30%), Positives = 70/127 (54%), Gaps = 22/127 (17%)
Query: 415 LENES----QPVTMLKEQMWSV--ELEIKAIEIDYEREKTDILAARINDLKIHLE----- 269
LE ES ++ +KE+M S+ ELE AI+ E D LAA++ L+ LE
Sbjct: 313 LEEESVKIISEISKIKEEMESLDGELEEYAIKRIQVGEIVDELAAKMELLRQRLEEVDKK 372
Query: 268 --NLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKL-ADAEKVRDHYTALEIKHEIL 98
L++ L+ +E K+ E+ + KL + +++ D E +++ ++E K +
Sbjct: 373 HRELRDRLVSRKEELEMYKERRGEILRERDKLIELLRRIDMDVEDIKNEIASIESKLKEF 432
Query: 97 --------PHIHKKISELESIKAVVTSKD 35
+ K+ EL S K +++S D
Sbjct: 433 ETEKKAKQEEVWKQEEELMSAKKMLSSAD 461
Score = 32.5 bits (72), Expect = 4.2
Identities = 28/129 (21%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Query: 388 MLKEQMWSVELEIKAIEIDYER---------EKTDILAARINDLKIHL----ENLKNELI 248
ML ++++ ++ E + + + R ++ D L I++L+ + E ++ E
Sbjct: 674 MLSDKIYELQREKEGLFAELNRAESLRKQYKDEVDRLTGMISELRNRISLLDEKIRTESG 733
Query: 247 PLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISEL 68
+EE + + E +N L+ YN KLA+ E+ I + +E+
Sbjct: 734 RIEELREKISQKSREKENYISSLKDYNSKLAEMEEA----------------IGELEAEI 777
Query: 67 ESIKAVVTSKDIAEIISRLTRI 2
E I+ ++ ++ +I+ L +I
Sbjct: 778 EEIERMLRGSEVPKIVEELDKI 799
>gi|4456475|emb|CAB36967| (AJ132949) rfg5 protein [Homo sapiens]
Length = 585
Score = 41.0 bits (94), Expect = 0.011
Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 406 ESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYN 227
++Q + L+E++ + +K + Y++ +++ AAR+N +++ +NL + E Y+
Sbjct: 343 QNQALQTLQERLHEADATLKREQESYKQMQSEF-AARLNKVEMERQNLAEAITLAERKYS 401
Query: 226 EEKKNITEL----KNLKQKLEKYNKKLAD 152
+EKK + EL K K LE ++L D
Sbjct: 402 DEKKRVDELQQQVKLYKLNLESSKQELID 430
Score = 35.6 bits (80), Expect = 0.49
Identities = 52/221 (23%), Positives = 105/221 (46%), Gaps = 17/221 (7%)
Query: 691 ATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKISDDALVF 512
AT E Y + A R K+ + +++ IT L ER + ++ D L
Sbjct: 359 ATLKREQESYKQMQSEFAARLNKVEMERQNLAEAIT----LAERKYSDEKKRV--DELQQ 412
Query: 511 AVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMW----------SV 362
VK K + + + +L+D + + L+++ + + LKE S+
Sbjct: 413 QVKLYKLNLESSKQ-----ELIDYKQKATRI-LQSKEKLINSLKEGSGFEGLDSSTASSM 466
Query: 361 ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKN----ITELKN 194
ELE E + +RE+ L +I+ L+ L++++ + + ES E+ ++ I K
Sbjct: 467 ELEELRHEKEMQREEIQKLMGQIHQLRSELQDMEAQQVNEAESAREQLQDLHDQIAGQKA 526
Query: 193 LKQKLEKYNKKLADAEKVRDHYTALEI---KHEILPHIHKKISELESIKAVVTSKDIA 29
KQ+LE ++L K HY ++ K+ + I + E++ ++ +T+K ++
Sbjct: 527 SKQELETELERL----KQEFHYIEEDLYRTKNTLQSRIKDRDEEIQKLRNQLTNKTLS 580
>gi|2135241|pir||I38153 gene retII protein - human >gi|36009|emb|CAA33787| (X15786) retII
[Homo sapiens]
Length = 899
Score = 41.0 bits (94), Expect = 0.011
Identities = 24/85 (28%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 406 ESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYN 227
++Q + L+E++ + +K + Y++ +++ AAR+N +++ +NL + E Y+
Sbjct: 343 QNQALQTLQERLHEADATLKREQESYKQMQSEF-AARLNKVEMERQNLAEAITLAERKYS 401
Query: 226 EEKKNITEL----KNLKQKLEKYNKKLAD 152
+EKK + EL K K LE ++L D
Sbjct: 402 DEKKRVDELQQQVKLYKLNLESSKQELID 430
>gi|1213484 (U41740) trans-Golgi p230 [Homo sapiens] >gi|1589554|prf||2211333A
peripheral membrane protein p230 [Homo sapiens]
Length = 2230
Score = 40.6 bits (93), Expect = 0.015
Identities = 40/140 (28%), Positives = 72/140 (50%), Gaps = 21/140 (15%)
Query: 475 RLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAAR 296
R+ +D++ + I L+ + KEQ + +L+ + E E+ K + ++
Sbjct: 461 RVKQEVVDVMKKSSEEQIAKLQKLHEKELARKEQELTKKLQTREREFQ-EQMKVALEKSQ 519
Query: 295 INDLKIHLENLKNELIPLEESYNEEKKNITE----LKNLKQKLEKYNKKLADAEKVRD-- 134
LKI E + E + LEE ++K +TE L++L+Q+ E Y ++ + E +
Sbjct: 520 SEYLKISQEKEQQESLALEELELQKKAILTESENKLRDLQQEAETYRTRILELESSLEKS 579
Query: 133 -------------HYTALEIKH--EILPHIHKKISELESIK 56
H A + KH EI + K +ELES+K
Sbjct: 580 LQENKNQSKDLAVHLEAEKNKHNKEITVMVEKHKTELESLK 620
>gi|4504065|oth|NP_002069|PGOLGA4 golgi autoantigen, golgin subfamily a, 4 >gi|1173565 (U31906)
golgin-245 [Homo sapiens] >gi|1587352|prf||2206426A
globin 245 [Homo sapiens]
Length = 2083
Score = 40.6 bits (93), Expect = 0.015
Identities = 40/140 (28%), Positives = 72/140 (50%), Gaps = 21/140 (15%)
Query: 475 RLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAAR 296
R+ +D++ + I L+ + KEQ + +L+ + E E+ K + ++
Sbjct: 316 RVKQEVVDVMKKSSEEQIAKLQKLHEKELARKEQELTKKLQTREREFQ-EQMKVALEKSQ 374
Query: 295 INDLKIHLENLKNELIPLEESYNEEKKNITE----LKNLKQKLEKYNKKLADAEKVRD-- 134
LKI E + E + LEE ++K +TE L++L+Q+ E Y ++ + E +
Sbjct: 375 SEYLKISQEKEQQESLALEELELQKKAILTESENKLRDLQQEAETYRTRILELESSLEKS 434
Query: 133 -------------HYTALEIKH--EILPHIHKKISELESIK 56
H A + KH EI + K +ELES+K
Sbjct: 435 LQENENQSKDLAVHLEAEKNKHNKEITVMVEKHKTELESLK 475
>gi|1236759|emb|CAA58041| (X82834) 256 kD golgin [Homo sapiens]
Length = 2185
Score = 40.6 bits (93), Expect = 0.015
Identities = 40/140 (28%), Positives = 72/140 (50%), Gaps = 21/140 (15%)
Query: 475 RLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAAR 296
R+ +D++ + I L+ + KEQ + +L+ + E E+ K + ++
Sbjct: 461 RVKQEVVDVMKKSSEEQIAKLQKLHEKELARKEQELTKKLQTREREFQ-EQMKVALEKSQ 519
Query: 295 INDLKIHLENLKNELIPLEESYNEEKKNITE----LKNLKQKLEKYNKKLADAEKVRD-- 134
LKI E + E + LEE ++K +TE L++L+Q+ E Y ++ + E +
Sbjct: 520 SEYLKISQEKEQQESLALEELELQKKAILTESENKLRDLQQEAETYRTRILELESSLEKS 579
Query: 133 -------------HYTALEIKH--EILPHIHKKISELESIK 56
H A + KH EI + K +ELES+K
Sbjct: 580 LQENKNQSKDLAVHLEAEKNKHNKEITVMVEKHKTELESLK 620
>gi|266890|sp|Q00799|RBP2_PLAVB RETICULOCYTE BINDING PROTEIN 2
Length = 1251
Score = 40.6 bits (93), Expect = 0.015
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 6/151 (3%)
Query: 466 DIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARIND 287
+I I L D+ + + +E ++ + K+++ S EIK + ++ T+I ++
Sbjct: 231 NIDIALEDAQIDTEVSKIEQINREIMNKKDEIKSYLSEIKEYK---DKCTTEISNSKRGK 287
Query: 286 LKIH-LENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIK 110
KI LE K P EES N K NI E+ + E+Y K + DAEK L K
Sbjct: 288 DKIEFLEKFK----PNEES-NSNKVNINEINENIRNSEQYLKDIEDAEKQASTKVELFHK 342
Query: 109 HE-ILPHIHKKIS----ELESIKAVVTSKDIAEIISR 14
HE + +I K+ E +S K + ++DI + I R
Sbjct: 343 HETTISNIFKESEILGVETKSQKKINKAEDIMKEIER 379
>gi|280512|pir||B42771 reticulocyte-binding protein 2 - Plasmodium vivax (fragment)
>gi|160628 (M88098) reticulocyte binding protein 2
[Plasmodium vivax]
Length = 1252
Score = 40.6 bits (93), Expect = 0.015
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 6/151 (3%)
Query: 466 DIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARIND 287
+I I L D+ + + +E ++ + K+++ S EIK + ++ T+I ++
Sbjct: 231 NIDIALEDAQIDTEVSKIEQINREIMNKKDEIKSYLSEIKEYK---DKCTTEISNSKRGK 287
Query: 286 LKIH-LENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIK 110
KI LE K P EES N K NI E+ + E+Y K + DAEK L K
Sbjct: 288 DKIEFLEKFK----PNEES-NSNKVNINEINENIRNSEQYLKDIEDAEKQASTKVELFHK 342
Query: 109 HE-ILPHIHKKIS----ELESIKAVVTSKDIAEIISR 14
HE + +I K+ E +S K + ++DI + I R
Sbjct: 343 HETTISNIFKESEILGVETKSQKKINKAEDIMKEIER 379
>gi|3845107 (AE001375) hypothetical protein [Plasmodium falciparum]
Length = 1979
Score = 40.2 bits (92), Expect = 0.019
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 412 ENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLK----IHLENLKNELIP 245
+N + + LKE++ ++I IE +E DI ++ L+ +E++ EL
Sbjct: 463 KNHKEEIHGLKEEL-KESVKITKIETQELQEMVDIKQKELDQLQEKYNAQIESISIELSK 521
Query: 244 LEESYNEEKKN-ITELKNLKQKLEKYNKKLADAEKVRDHYT 125
E+ YN+ K I E+ NL +KLE+ NK+ + ++++YT
Sbjct: 522 KEKEYNQYKNTYIEEINNLNEKLEETNKEYTN---LQNNYT 559
Score = 37.5 bits (85), Expect = 0.13
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
IK E+D E+ + + L ++ L++LKN + ++ N+ K E+KNLK +LEK
Sbjct: 377 IKVREMDIEKREHNFL-----HMEDQLKDLKNSFV---KNNNQLKVYKCEIKNLKTELEK 428
Query: 172 YNKKLADAEKV 140
K+L D E V
Sbjct: 429 KEKELKDIENV 439
Score = 35.2 bits (79), Expect = 0.64
Identities = 34/115 (29%), Positives = 53/115 (45%), Gaps = 1/115 (0%)
Query: 409 NESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESY 230
NE + + KE+ + +E + +E + ERE I I D+K HLE LK
Sbjct: 215 NEKEKNIIKKEETFH-NIEKEYLEKNKERETISI---EIIDIKKHLEKLK---------- 260
Query: 229 NEEKKNITELKNLKQKLEKYNKKLADAEKV-RDHYTALEIKHEILPHIHKKISELE 65
E+K K+ LE NKKL E V ++ ++ K+E + ++ I E E
Sbjct: 261 -------IEIKEKKEDLENLNKKLLSKENVLKELKGCVKEKNETINSLNDNIIEKE 309
Score = 33.6 bits (75), Expect = 1.9
Identities = 42/128 (32%), Positives = 76/128 (58%), Gaps = 20/128 (15%)
Query: 442 SACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEI-DYE---REKTDILAARINDLKIH 275
S+ S+ IVN E++ + L++++ E++ K I+ DYE +EK D + +I D+
Sbjct: 142 SSLSNKIVNYESK---IEELEKEL--KEVKDKNIDNNDYENKLKEKEDFVKQKI-DMLNE 195
Query: 274 LENLKNE----LIPLEESYNEEKKNITELKNLKQKLEK-YNKKLADAE-------KVRDH 131
ENL E + E+ NE++KNI + + +EK Y +K + E ++ H
Sbjct: 196 KENLLQEKELDINKREKKINEKEKNIIKKEETFHNIEKEYLEKNKERETISIEIIDIKKH 255
Query: 130 YTALEI----KHEILPHIHKKISELESI 59
L+I K E L +++KK+ E++
Sbjct: 256 LEKLKIEIKEKKEDLENLNKKLLSKENV 283
Score = 32.1 bits (71), Expect = 5.6
Identities = 33/140 (23%), Positives = 76/140 (53%), Gaps = 29/140 (20%)
Query: 457 IDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYER--------------- 323
++LVD ++E + + + L +Q+ +I + + E+
Sbjct: 1178 LNLVDQGKKKLKKDVEKQKKEIEKLNKQLTKCNKQIDELNEEVEKLNNENIELITYSNDL 1237
Query: 322 -----EKTDILAARINDLKIHLENLKNELIPLEESY----NEEKKNITELKNLKQKLE-- 176
K + L ++++ + +++ +K+++ +E+ +E+K+N+ E+ NLK+K E
Sbjct: 1238 NNKFDMKENNLMMKLDENEDNIKKMKSKIDDMEKEIKYREDEKKRNLNEINNLKKKNEDM 1297
Query: 175 --KYNKKLADAEKVRDHYTALEIKHEILPHIHKKIS-ELESIKAVVTSK 38
KYN ++ Y + +K+E + +K+ S + E IK K
Sbjct: 1298 CIKYN-------EMNIKYGDICVKYEEMSLTYKETSLKYEQIKVKYDEK 1339
>gi|544198|sp|P35458|DYNA_CHICK DYNACTIN, 117 KD ISOFORM >gi|104650|pir||A41642 dynactin - chicken
>gi|63921|emb|CAA44617| (X62773) dynactin [Gallus sp.]
Length = 1053
Score = 40.2 bits (92), Expect = 0.019
Identities = 37/137 (27%), Positives = 76/137 (55%), Gaps = 16/137 (11%)
Query: 511 AVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEID 332
A+++ ++Y+ AI++ A E+ Q V LKE++ + ++++ ++ +
Sbjct: 108 ALEAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVDSLKEKVEYLTMDLEILKHE 167
Query: 331 YEREKTDILA------------ARINDLKIHLENL----KNELIPLEESYNEEKKNITEL 200
E + +D A AR+ + + + +L K E + L++ EKKN TEL
Sbjct: 168 IEEKGSDGAASSYQVKQLEEQNARLKEALVRMRDLSASEKQEHVKLQKQM--EKKN-TEL 224
Query: 199 KNLKQKLEKYNKKLADAEKVRDHYTALEIKHEI 101
++L+Q+ EK +++ AEK D E+K ++
Sbjct: 225 ESLRQQREKLQEEVKQAEKTVD-----ELKEQV 252
>gi|1730826|sp|P53865|YNW5_YEAST HYPOTHETICAL 67.4 KD PROTEIN IN URE2-SSU72 INTERGENIC REGION
>gi|2131931|pir||S63183 hypothetical protein YNL225c -
yeast (Saccharomyces cerevisiae)
>gi|1183989|emb|CAA93373| (Z69381) Similar to Giardia
median body protein. [Saccharomyces cerevisiae]
>gi|1302247|emb|CAA96128| (Z71501) ORF YNL225c
[Saccharomyces cerevisiae]
Length = 581
Score = 40.2 bits (92), Expect = 0.019
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 5/166 (3%)
Query: 565 ERFEAHHGVKISDDALVFAVKSSKK--YISNRRLPDIAIDLVDSACSSAIVNLENESQPV 392
E FE G+ D L + ++S K +I + P+I L C+S L SQ
Sbjct: 269 ELFEIPIGILFFD--LYDSEENSSKLDHILQEKYPNIKGFL----CASQQEELSRISQRF 322
Query: 391 TMLKEQMWSV--ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEK 218
K + + ELE K IEI REK + L L + L ++ L E
Sbjct: 323 KNAKAEAEDLRNELENKKIEIQTMREKNNTLIGTNKTLSKQNKILCDKFDKLTIDEKEIL 382
Query: 217 KNITELKNLKQKLEKYNKKLADAEKVRDHY-TALEIKHEILPHIHKKISEL 68
K E +K KLE+ N++L EK ++ Y T+L+ K ++L KK + L
Sbjct: 383 KGCNE--EIKIKLERLNERLGSWEKSKEKYETSLKDKEKMLADAEKKTNTL 431
>gi|1709541|sp|P47459|P65H_MYCGE PROLINE-RICH P65 PROTEIN HOMOLOG >gi|1361463|pir||I64223
bifunctional endo-1,4-beta-xylanase homolog - Mycoplasma
genitalium (SGC3) >gi|3844817 (U39701) proline-rich P65
protein [Mycoplasma genitalium]
Length = 372
Score = 40.2 bits (92), Expect = 0.019
Identities = 26/77 (33%), Positives = 44/77 (56%), Gaps = 4/77 (5%)
Query: 298 RINDLKIHLENLKNELIPLEESYNEEKKNITELK-NLKQKLEKYNKKLA---DAEKVRDH 131
R+N LK L+N L ++ NE N+ ++ NL+QK++ +K+L D +K+ D
Sbjct: 215 RLNSLKSKLDNALYSLDKTIQNTNENTANLEAIRHNLEQKIQNQSKQLRTNFDTQKLDDK 274
Query: 130 YTALEIKHEILPHIHKKISEL 68
LEI+ + L + +SEL
Sbjct: 275 INELEIRMQKLTRNFESLSEL 295
>gi|457146 (L27838) rhoptry protein [Plasmodium yoelii]
Length = 2269
Score = 39.9 bits (91), Expect = 0.025
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 424 IVNLENESQPVTMLKEQMWSVE-LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELI 248
+ N + ++ +T +K SVE + K I+I+ R K+D NDL+ + NL +
Sbjct: 1094 VANNDKSNKAITSIKV---SVEPFKTKIIKINEIRTKSDDCLKETNDLEKQISNL--SID 1148
Query: 247 PLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISEL 68
E E K + L+ L + L+K K + D +K D + E + HKK E+
Sbjct: 1149 TQETKLTENGKQLKTLEELLESLKKQKKNIEDQKKELDEVNSKIKNIENTVNQHKKNYEI 1208
Query: 67 ESIKAV 50
++ +
Sbjct: 1209 GIVEKI 1214
Score = 34.8 bits (78), Expect = 0.84
Identities = 55/206 (26%), Positives = 100/206 (47%), Gaps = 25/206 (12%)
Query: 685 TFYEYRKYIENDQALARRFVKI-NVPEPTI--SDGITILRGLRERFEAHHGVKISDDALV 515
T+Y Y+ EN + R K+ N I S GI + + ++ ++ K ++D L+
Sbjct: 1394 TYYSYKYEAEN---IFRNIPKLANTLNIKIKNSSGIDLSKDIKIAILSYLDSK-TEDTLI 1449
Query: 514 FAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQ-------MWSVEL 356
F KK + ++ D L+D S + + E Q + ++ E + EL
Sbjct: 1450 FIPSPQKKTETYTKISDSYSILLDILKKSQELQ-KKEQQTLKLIFENRRLYEKVQATNEL 1508
Query: 355 EIKAIEIDYEREK----TDILAARINDLKIHLENLKNELIPLEES-YNEEKKNITELKNL 191
++ Y++EK +L + N+L N +N LE S Y++ K+ K
Sbjct: 1509 RGTLSDLKYKKEKILSEVKLLLHKSNELNKLSCNFQNYDTILESSKYDQVKEKSNNYKQE 1568
Query: 190 KQKL----------EKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISEL 68
K+KL EK+N + E++ ++Y + E + IL +K+ EL
Sbjct: 1569 KEKLGIDFNVTDMEEKFNNDIKVIEELENNYDSSEENNNIL-QSKQKLKEL 1618
Score = 34.0 bits (76), Expect = 1.4
Identities = 32/128 (25%), Positives = 66/128 (51%), Gaps = 25/128 (19%)
Query: 385 LKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNIT 206
+KE+ + EI IEI +I ++ I++E+L ++ + + K+N+T
Sbjct: 540 IKEKNIHINEEISKIEIKIHASIYNISEETEREIGINIESLNTKV------FEKVKENVT 593
Query: 205 ELKNLKQKLEKYN----------------KKLAD-----AEKVRDHYTALE----IKHEI 101
L +K+KL+ Y+ KK+ D ++++ H L+
Sbjct: 594 NLNKIKEKLKHYDFSDFGKEGNIKYTDKIKKINDDIMAVSQQIDQHINGLDDIQKKSESY 653
Query: 100 LPHIHKKISELESIKAVVTSKDIAEIISRLTRI 2
+ + ++I++LE + S D E I + +I
Sbjct: 654 VSEMKEQINKLEKVSNTEISNDNVEGIKKKQQI 686
>gi|127774|sp|P08799|MYS2_DICDI MYOSIN II HEAVY CHAIN, NON MUSCLE >gi|84128|pir||A26655 myosin heavy
chain - slime mold (Dictyostelium discoideum) >gi|167835
(M14628) myosin heavy chain [Dictyostelium discoideum]
Length = 2116
Score = 39.9 bits (91), Expect = 0.025
Identities = 30/130 (23%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEE 236
L+ E + + + + ++E + + +EI + + + + +++ K+ LENL+N+ +EE
Sbjct: 872 LKAEKETLKAMYDSKDALEAQKRELEI-----RVEDMESELDEKKLALENLQNQKRSVEE 926
Query: 235 SYNEEKKNITELKNLKQKLE----KYNKKLADAEKVRDHYT-ALEIKHEILPHIHKKISE 71
+ ++ + E + L+ LE KY ++L + ++V D + + +I + K++ E
Sbjct: 927 KVRDLEEELQEEQKLRNTLEKLKKKYEEELEEMKRVNDGQSDTISRLEKIKDELQKEVEE 986
Query: 70 L-ESIKAVVTSKDIAE 26
L ES K + E
Sbjct: 987 LTESFSEESKDKGVLE 1002
Score = 32.8 bits (73), Expect = 3.2
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 24/143 (16%)
Query: 463 IAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDI----LAAR 296
+ +DL D + A ++ K + E++ + E + + +D L
Sbjct: 1204 VELDLEDKSAQLAEETAAKQALDKLKKKLEQELSEVQTQLSEANNKNVNSDSTNKHLETS 1263
Query: 295 INDLKIHLE--------------NLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKL 158
N+LK+ LE L++EL + E EEKK + K LEK +L
Sbjct: 1264 FNNLKLELEAEQKAKQALEKKRLGLESELKHVNEQLEEEKKQKESNEKRKVDLEKEVSEL 1323
Query: 157 AD--AEKVRDHYTALEIKHEILPHIHKKISELESIKA----VVTSKD 35
D E+V E K +KK SEL+ IK VV+S+D
Sbjct: 1324 KDQIEEEVASKKAVTEAK-------NKKESELDEIKRQYADVVSSRD 1363
>gi|2285985|emb|CAA63750| (X93464) M-like protein [Streptococcus dysgalactiae]
Length = 475
Score = 39.5 bits (90), Expect = 0.033
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 14/116 (12%)
Query: 388 MLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESY------- 230
+LKE++ +E E ++ E+++ DI +DLK L+NLK++ E Y
Sbjct: 71 ILKEKLSKIEEEHDLLQAKIEKKEGDI-----SDLKEKLQNLKDDKSLAEAGYANSYKHH 125
Query: 229 ----NEEKKNITELKNLKQKLEKYNKKLAD---AEKVRDHYTALEIKHEILPHIHKKISE 71
E+ K+I++LK Q L K +K LA+ A + H L K ++ +I +
Sbjct: 126 QEQLAEKDKDISDLKEKLQNL-KDDKSLAEAGYANSYKHHQEQLAEKDKLNAEKDDQIKQ 184
Query: 70 LESIKAVVTS 41
LE K ++ +
Sbjct: 185 LEKQKQILNA 194
>gi|4239734|emb|CAA10769| (AJ132769) hypothetical protein [Cryptosporidium parvum]
Length = 429
Score = 39.5 bits (90), Expect = 0.033
Identities = 37/114 (32%), Positives = 54/114 (46%), Gaps = 1/114 (0%)
Query: 406 ESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYN 227
E + LKE SV+L+++ EI + K D+L + L I + L E +E Y
Sbjct: 168 EKEEKAKLKEDYDSVKLQLQN-EICNKNIKKDLLNTQ---LVIERDRLSKEKTYIENLYQ 223
Query: 226 EEKKNITELKNLKQKLE-KYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELE 65
E L+ L +L KYNK D EK+ D Y ++ H + + K SELE
Sbjct: 224 ELNNKSANLEILVAELSSKYNKLEQDHEKLTDKYNEVDQNHTLTVNQLSK-SELE 277
>gi|730753|sp|P38989|SMC2_YEAST CHROMOSOME SEGREGATION PROTEIN SMC2 (DA-BOX PROTEIN SMC2)
>gi|1362470|pir||A56157 chromosome segregation protein
SMC2 - yeast (Saccharomyces cerevisiae) >gi|468040
(U05820) Smc2p [Saccharomyces cerevisiae]
>gi|836786|dbj|BAA09270| (D50617) chromosome segregation
protein SMC2p [Saccharomyces cerevisiae]
>gi|893426|dbj|BAA08042| (D44602) DA-box protein Smc2p
[Saccharomyces cerevisiae]
Length = 1170
Score = 39.1 bits (89), Expect = 0.043
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Query: 505 KSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYE 326
+S +KY + L ++ + + S S L N + + LK + +E +I+ +E D
Sbjct: 813 ESERKYDLFQNL-ELETEQLSSELDSNKTLLHNHLKSIESLKLENSDLEGKIRGVEDDLV 871
Query: 325 REKTDILAARINDLKIHLENLKNELIPLE----ESYNEEKKNITELKNLKQKLEKYNKKL 158
+T++ N+ K L ++ +EL LE + +E+K + EL+ L L KY
Sbjct: 872 TVQTEL-----NEEKKRLMDIDDELNELETLIKKKQDEKKSSELELQKLVHDLNKYKSNT 926
Query: 157 ADAEKVRDHYTALEIKHEIL 98
+ EK+ + L KHE L
Sbjct: 927 NNMEKIIED---LRQKHEFL 943
>gi|2314102|gb|AAD08008| (AE000604) H. pylori predicted coding region HP0958 [Helicobacter
pylori 26695]
Length = 254
Score = 39.1 bits (89), Expect = 0.043
Identities = 32/88 (36%), Positives = 46/88 (51%), Gaps = 15/88 (17%)
Query: 439 ACSSAIVNLENESQPV---------TMLKEQMWSVELEIKAIEIDYERE------KTDIL 305
A + AI+NLE E + T+ ++ K EI ERE + DI
Sbjct: 41 AKNKAILNLEEEKLALKLQVSKNEQTLQDTNTKIASIQKKMSEIKSERELRSLNIEEDIA 100
Query: 304 AARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
R N +ENL+NE+ E + KK + EL+ L Q+LE
Sbjct: 101 KERSNQANREIENLQNEIKHKSEKQEDLKKEMLELEKLVQQLE 143
>gi|3925685|emb|CAA70844| (Y09631) PIBF1 protein [Homo sapiens]
Length = 758
Score = 39.1 bits (89), Expect = 0.043
Identities = 34/98 (34%), Positives = 53/98 (53%), Gaps = 22/98 (22%)
Query: 307 LAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKL----------------- 179
L + N L L KN+L L E+Y E++KN +E++ Q+L
Sbjct: 201 LQVKKNILAEELSTNKNQLKQLTETYEEDRKNYSEVQIRCQRLALELADTKQLIQQGDYR 260
Query: 178 -EKYNKKLADAEKVRDHYTALEIKHEILPHIH----KKISELESIKAVVTSKDIAEIISR 14
E Y+K ++ + + L KHEIL H K+ SEL K VVT + ++ +
Sbjct: 261 QENYDKVKSERDALEQEVIELRRKHEILEASHMIQTKERSELS--KEVVTLEQTVTLLQK 318
>gi|2128791|pir||A64465 hypothetical protein MJ1322 - Methanococcus jannaschii >gi|1591962
(U67572) purine NTPase [Methanococcus jannaschii]
Length = 1005
Score = 39.1 bits (89), Expect = 0.043
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 23/110 (20%)
Query: 394 VTMLKEQMWSVELEIKAIEIDYER----------EKTDILAARINDLKIHLENLKNELIP 245
+T+L+E+ S+E I +E + E + I + K LENL+ E I
Sbjct: 415 ITLLQEKK-SIEKNINDLETRINKLLEETKNIDIESIENSLKEIEEKKKVLENLQKEKIE 473
Query: 244 LEESYNEEKKNITELKNLKQKLEKY-------------NKKLADAEKVRDHYTALEIKHE 104
L + E I LK + +L++ NKK+ E + H T L K+
Sbjct: 474 LNKKLGEINSEIKRLKKILDELKEVEGKCPLCKTPIDENKKM---ELINQHKTQLNNKYT 530
Query: 103 ILPHIHKKISELE 65
L I+KKI E+E
Sbjct: 531 ELEEINKKIREIE 543
Score = 36.7 bits (83), Expect = 0.22
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 436 CSSAIVNLENESQPVTMLKEQMWSVE-LEIKAIEIDYEREKTDILAARINDLKIHLENLK 260
C + L + + + LK+++ ++ E + IEI+ R L LE LK
Sbjct: 659 CREELNKLREDEREINRLKDKLNELKNKEKELIEIENRRSLKFDKYKEYLGLTEKLEELK 718
Query: 259 NELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKK 80
N LEE YN I + N+K+K K + ++ K+ + + E + +I++K
Sbjct: 719 NIKDGLEEIYNICNSKILAIDNIKRKYNKEDIEIYLNNKILEVNKEINDIEERISYINQK 778
Query: 79 ISEL 68
+ E+
Sbjct: 779 LDEI 782
Score = 36.0 bits (81), Expect = 0.37
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 424 IVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIP 245
I +E+ + + E + +++ I+ D E+ K I ++ D +L+ L N++
Sbjct: 296 IRKIESRLRELKSHYEDYLKLTKQLEIIKGDIEKLKEFINKSKYRDDIDNLDTLLNKIKD 355
Query: 244 LEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTA-LEIKHEILPHIHKKISEL 68
E K + ELKNL +++EK K E+ +++Y LE++ + + + K++ L
Sbjct: 356 EIERVETIKDLLEELKNLNEEIEKIEKYKRICEECKEYYEKYLELEEKAVE--YNKLT-L 412
Query: 67 ESIKAVVTSKDIAEIISRL-TRI 2
E I + K I + I+ L TRI
Sbjct: 413 EYITLLQEKKSIEKNINDLETRI 435
Score = 32.5 bits (72), Expect = 4.2
Identities = 28/109 (25%), Positives = 57/109 (51%), Gaps = 11/109 (10%)
Query: 379 EQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLK-------NELIPLEESYN-- 227
++ + EL+ K +++ + +K + ++N +K E+++ N+ + E+ N
Sbjct: 189 KENYEKELKNKMSQLEEKNKKLMEINDKLNKIKKEFEDIEKLFNEWENKKLLYEKFINKL 248
Query: 226 EEKKNITELKNLKQKLEKY--NKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKA 53
EE+K ELKN + K+ +Y N + E + H E ++ I K S L +K+
Sbjct: 249 EERKRALELKNQELKILEYDLNTVVEARETLNRHKDEYEKYKSLVDEIRKIESRLRELKS 308
Score = 32.1 bits (71), Expect = 5.6
Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 355 EIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ-KL 179
EI+ I + +EK ++ + + + LK++L L+ ++K + E++N + K
Sbjct: 646 EIENIVSGWNKEKCREELNKLREDEREINRLKDKLNELKN----KEKELIEIENRRSLKF 701
Query: 178 EKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDI 32
+KY + L EK+ + + EI + KI +++IK +DI
Sbjct: 702 DKYKEYLGLTEKLEELKNIKDGLEEIYNICNSKILAIDNIKRKYNKEDI 750
>gi|2982915 (AE000677) putative protein [Aquifex aeolicus]
Length = 400
Score = 39.1 bits (89), Expect = 0.043
Identities = 31/148 (20%), Positives = 73/148 (48%), Gaps = 1/148 (0%)
Query: 457 IDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKI 278
++ + + + LE + ++E+ ++ EI I++ E+++ ++ A+ K+
Sbjct: 111 LERIQKEKEALLEELEKNEEVRQKVEEERERLKKEISLIKLQIEQKERELERAKEAQEKL 170
Query: 277 H-LENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEI 101
+E + E+ L+E E +KN+ + K ++KL + N+KL ++ +
Sbjct: 171 EEVEKKEKEVNKLKEKLRELEKNLKKQKEKEEKLLESNRKLFQLLELLGRKEDKRRGSKE 230
Query: 100 LPHIHKKISELESIKAVVTSKDIAEIISR 14
+ + K+ +L +K V+ +D+ EI SR
Sbjct: 231 VRELRKERKKL--VKEVLELQDLLEIYSR 257
>gi|399943|sp|P31540|HS98_NEUCR HEAT SHOCK PROTEIN HSP98 >gi|322999|pir||S28174 heat-shock protein
hsp98 - Neurospora crassa (fragment)
>gi|262762|bbs|121647 hsp98=heat-shock protein
[Neurospora crassa, 74A, Peptide Partial, 29 aa]
Length = 29
Score = 38.7 bits (88), Expect = 0.056
Identities = 17/29 (58%), Positives = 21/29 (71%)
Query: 751 LDCTNMLKPSLASGKIKCIGATTFYEYRK 665
+D N+LKP LA G++ IGATT EYRK
Sbjct: 1 MDAANLLKPMLARGQLHXIGATTLAEYRK 29
>gi|3435244 (AF083322) centriole associated protein CEP110 [Homo sapiens]
Length = 994
Score = 38.7 bits (88), Expect = 0.056
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 13/156 (8%)
Query: 505 KSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYE 326
K+ K S R D + +S S +N + T K + E + + +E +
Sbjct: 95 KTLLKRRSELREADRLLAEAESELSCTKEKTKNAVEKFTDAKRSLLQTESDAEELERRAQ 154
Query: 325 REKTDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNIT-----------ELKNLKQ 185
+++ A ++ L+ ++L+ I EE E K + + + L +
Sbjct: 155 ETAVNLVKADQQLRSLQADAKDLEQHKIKQEEILKEINKIVAAKDSDFQCLSKKKEKLTE 214
Query: 184 KLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSK 38
+L+K K + AE+ DH+ + + E+L + K +ELE +K+ VTS+
Sbjct: 215 ELQKLQKDIEMAERNEDHHLQVLKESEVL--LQAKRAELEKLKSQVTSQ 261
>gi|2497520|sp|Q12840|KINN_HUMAN NEURONAL KINESIN HEAVY CHAIN (NKHC) >gi|516516 (U06698) neuronal
kinesin heavy chain [Homo sapiens]
Length = 1032
Score = 38.7 bits (88), Expect = 0.056
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 403 SQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNE 224
S + L+ Q E+ +K E D + + ++ A ++ H E +L L + NE
Sbjct: 665 SDELAKLQAQETVHEVALKDKEPDTQ-DADEVKKALELQMESHREAHHRQLARLRDEINE 723
Query: 223 EKKNITELKNLKQKLEKYNKKL-ADAEKVRDHYTALEIKHEILPHIHKK 80
++K I ELK+L QKL+ +KL AD EK++ K + L ++++
Sbjct: 724 KQKTIDELKDLNQKLQLELEKLQADYEKLKSEEHEKSTKLQELTFLYER 772
>gi|3758855|emb|CAB11140| (Z98551) predicted using hexExon; MAL3P6.11 (PFC0760c), Hypothetical
protein, len: 3395 aa [Plasmodium falciparum]
Length = 3394
Score = 38.7 bits (88), Expect = 0.056
Identities = 24/66 (36%), Positives = 39/66 (58%), Gaps = 4/66 (6%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKN----L 191
LE +I + EK + L A I +L+++LE NE I L+E NE++K I + L
Sbjct: 1214 LEENYEKIKNKNEKEEYLHACIKELEMNLERYNNEKIILDEQINEKEKKINIINEKYLIL 1273
Query: 190 KQKLEKYNKK 161
+++ E+Y K
Sbjct: 1274 EKEYEEYQNK 1283
Score = 37.9 bits (86), Expect = 0.097
Identities = 38/133 (28%), Positives = 67/133 (49%), Gaps = 4/133 (3%)
Query: 505 KSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPV---TMLKEQMWSVELEIKAIEI 335
K+SK+ IS RL +I + ++ ++N NE + ++L ++ ++ +K I+
Sbjct: 1631 KNSKEEIS--RLKEICKEQLEKHKEFLLINKSNEDKLKYINSLLCDEKDKYDIVVKDIKN 1688
Query: 334 DYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKL- 158
+ R + D L IN+ ++ LK+E L N K TE N+KQK E Y K +
Sbjct: 1689 NM-RNEIDKLNNDINEKSYEIKLLKHENNNLINEMNILKNKETENMNIKQKEEDYIKLIK 1747
Query: 157 ADAEKVRDHYTALEIKH 107
D +++ Y L K+
Sbjct: 1748 KDKTNIQNEYNDLLEKY 1764
>gi|4494912|gb|AAD21334| (AF083501) transport protein [Macaca mulatta rhadinovirus 17577]
Length = 686
Score = 38.7 bits (88), Expect = 0.056
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 385 LKEQMWSVELEIKAIEIDYE----REKTDILAARINDLKIHLENLKNELIPLEESYNEEK 218
+ ++ ++ ++ A+ +D + I ARI K +ENL +L+PL N +
Sbjct: 1 MARELAALYAQLSALAVDLSLVIFADPRSIDGARILKTKTQIENLNRDLLPLLREQNSVE 60
Query: 217 KNITEL------KNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKIS 74
+ L KN++ KL + + L R+H+ L ++ E H H ++
Sbjct: 61 TSSLSLEVEHLAKNIEDKLGELERSLRQRYSSREHFETLHLRPEC--HYHSTVT 112
>gi|4582571|emb|CAB40350| (AJ131892) Hyperion protein, 419 kD isoform [Gallus gallus]
Length = 3616
Score = 38.3 bits (87), Expect = 0.074
Identities = 33/140 (23%), Positives = 66/140 (46%), Gaps = 2/140 (1%)
Query: 484 SNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDIL 305
+ RRL + +L D IV ++ E ++K+ +E + +++ E+ + L
Sbjct: 106 TQRRLAQLQAEL-DEMHGQQIVQMKQE-----LIKQHAVEIEQRLAQQKVELEKTSSLCL 159
Query: 304 AARINDLKIHLENLK-NEL-IPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDH 131
+ +N ++HL N+K NEL + L+++ NE +K EL + + +K K+ D
Sbjct: 160 SDNVNQDQMHLMNIKINELNVKLQDADNEREKIKQELSQQMEVISA--EKSLQQTKIEDL 217
Query: 130 YTALEIKHEILPHIHKKISELE 65
L E + + I ++E
Sbjct: 218 LQELNFSREQVQRAKQTIMDME 239
Score = 35.2 bits (79), Expect = 0.64
Identities = 28/117 (23%), Positives = 54/117 (45%)
Query: 382 KEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITE 203
+E W++E E +E ER + ++ DLK LE+ K + + L E EEK+ ++
Sbjct: 2926 RELQWALEKEKAKMERTEERRREEL-----EDLKFSLEDQKQKNLQLNELLEEEKQLSSD 2980
Query: 202 LKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDI 32
L++ + E + E+ R+ + ++ E K+ LE A+ K++
Sbjct: 2981 LQHKIESQEALSAAQLSRERGRNSELQVLLESE-------KVRALEISSALEREKEL 3030
>gi|699398 (U18544) puff C4B protein [Trichosia pubescens] >gi|699400 (U18545)
puff C4B protein [Trichosia pubescens]
Length = 286
Score = 38.3 bits (87), Expect = 0.074
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 3/131 (2%)
Query: 535 ISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVEL 356
++ + L +K + I N+ L D L +C + + Q + L++Q+ +
Sbjct: 74 LTKENLALKIKLNNLEIENKSLRDKIEAL---SCENTKLK-----QRICDLEKQLAQTQE 125
Query: 355 EIKAIEIDYE--REKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNI-TELKNLKQ 185
E+K D +++ + L I DL++ ++NLK +L E +KK + EL K+
Sbjct: 126 ELKKCRQDLSDCQKEKERLTKIIADLQLQIKNLKEQL----ECCEADKKRLQAELDACKK 181
Query: 184 KLEKYNKKLADAEK 143
KL K+LAD EK
Sbjct: 182 KLNDCEKRLADCEK 195
>gi|125416|sp|P28738|KINN_MOUSE NEURONAL KINESIN HEAVY CHAIN (NKHC) >gi|481072|pir||S37711 kinesin
heavy chain - mouse >gi|52797|emb|CAA43677| (X61435)
kinesin heavy chain [Mus musculus]
Length = 1027
Score = 37.9 bits (86), Expect = 0.097
Identities = 33/118 (27%), Positives = 66/118 (54%), Gaps = 28/118 (23%)
Query: 433 SSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARIND----------- 287
SS + + + L E M +VEL+ + +E Y+ ++ + ++
Sbjct: 627 SSCQLLISQHEAKIRSLTEYMQTVELKKRHLEESYDSLSDELARLQAHETVHEVALKDKE 686
Query: 286 ------------LKIHLENLKN----ELIPLEESYNEEKKNITELKNLKQKLEKYNKKL- 158
L++ +EN + +L L + NE++K I ELK+L QKL+ +KL
Sbjct: 687 PDTQDAEEVKKALELQMENHREAHHRQLARLRDEINEKQKTIDELKDLNQKLQLELEKLQ 746
Query: 157 ADAEKVRDHYTALEIKHEILPHIHKK 80
AD E++++ K + L ++++
Sbjct: 747 ADYERLKNEENEKSAKLQELTFLYER 772
>gi|3628755 (U42424) corneal epithelial Rho-associated-ser/thr kinase; ROCK-I
[Oryctolagus cuniculus]
Length = 1354
Score = 37.9 bits (86), Expect = 0.097
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 24/141 (17%)
Query: 448 VDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLK---I 278
++ CS V+L+ Q + L E +E E+K + + E+E L + N+LK
Sbjct: 737 IEKQCSMLDVDLKQSQQKLEHLTENKERMEDEVKNLTLQLEQESNKRLLLQ-NELKTQAF 795
Query: 277 HLENLKNELIPLEESYNEEKKNITELK-----NLKQKLEKYN------KKLADAEKVRDH 131
+NLK LE+ +E + E K L Q ++Y ++L D + +
Sbjct: 796 EADNLKG----LEKQMKQEINTLLEAKRLLEFELAQLTKQYRGNEGQMRELQDQLEAEQY 851
Query: 130 YTAL------EIKHEILPHIH---KKISELESIK-AVVTSKDIAE 26
++ L E+K EI KKI EL++ K + T D+AE
Sbjct: 852 FSTLYKTQVKELKEEIEEKNRENLKKIQELQNEKETLATQLDLAE 896
>gi|3929108 (AF067179) kinesin heavy chain [Mus musculus]
Length = 1027
Score = 37.9 bits (86), Expect = 0.097
Identities = 33/118 (27%), Positives = 66/118 (54%), Gaps = 28/118 (23%)
Query: 433 SSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARIND----------- 287
SS + + + L E M +VEL+ + +E Y+ ++ + ++
Sbjct: 627 SSCQLLISQHEAKIRSLTEYMQTVELKKRHLEESYDSLSDELARLQAHETVHEVALKDKE 686
Query: 286 ------------LKIHLENLKN----ELIPLEESYNEEKKNITELKNLKQKLEKYNKKL- 158
L++ +EN + +L L + NE++K I ELK+L QKL+ +KL
Sbjct: 687 PDTQDAEEVKKALELQMENHREAHHRQLARLRDEINEKQKTIDELKDLNQKLQLELEKLQ 746
Query: 157 ADAEKVRDHYTALEIKHEILPHIHKK 80
AD E++++ K + L ++++
Sbjct: 747 ADYERLKNEENEKSAKLQELTFLYER 772
>gi|2293505 (AF010473) Sp8 [Schizosaccharomyces pombe]
Length = 1173
Score = 37.9 bits (86), Expect = 0.097
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
Query: 415 LENESQPVTMLKEQMWSVELE---IKAIEIDYEREKTDILAARINDLKIHLENLKNELIP 245
L+N+ L+E +ELE +E + ++K + R L+ L +L+++
Sbjct: 317 LDNQQMMEIKLQELNGVIELEKQRFSTLEAKFTQQKNTSYSEREALLESSLSDLQSKHTS 376
Query: 244 LEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIK-HEILPHIHKKISEL 68
LE YN +NI +L+ + E+ E+V+ Y ++ E L H KI+ L
Sbjct: 377 LESQYNYSLRNIEQLQAASKLAEEM------VERVKTEYDEYRLQTSESLEKNHLKITSL 430
Query: 67 ESIKAVVTSKDIAEIISRLTRI 2
E + V+ +IA R I
Sbjct: 431 EQ-RIVILQDEIASSSLRCENI 451
>gi|3875553|emb|CAB02893| (Z81055) cDNA EST EMBL:D34991 comes from this gene [Caenorhabditis
elegans]
Length = 824
Score = 37.9 bits (86), Expect = 0.097
Identities = 47/163 (28%), Positives = 82/163 (49%), Gaps = 36/163 (22%)
Query: 502 SSKKYISNRRLPDIAIDLVDSACSSAIVN------LENESQPVTMLKEQMWSVELEIKAI 341
+ K Y N L D+ DL A +S + N +++ + M K+++ +ELE+ A
Sbjct: 471 NEKSYKKN--LEDLLNDLNQRALNSEMANHLQKEGIQSVETYLQMAKKRIEHLELELSAT 528
Query: 340 EIDYE---------------------------REKTDILAARINDLKIHLENLKNELIPL 242
E +E+T L +++ +ENLK +L L
Sbjct: 529 NATIEFQSQQLDRAGNMLITEQEIRNQTSVQYKERTSALENQLSQKDAEIENLKRDLQQL 588
Query: 241 EESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPH---IHKKISE 71
+ E K E N+ + ++ K ++AEK+R + AL K+ L I K S
Sbjct: 589 VTKHESELKEQHEQLNVHHQSQQ--KLHSEAEKLRREHEALGKKNCFLGERCKIFVKDSR 646
Query: 70 LESIKAVVTSKDIAEIISR 14
+K +S +AE +S+
Sbjct: 647 SGVMKRSTSSDSLAEFLSK 665
>gi|127737|sp|P12844|MYSA_CAEEL MYOSIN HEAVY CHAIN A (MHC A) >gi|84468|pir||S02771 myosin heavy chain
A - Caenorhabditis elegans >gi|6799|emb|CAA30856|
(X08067) myosin heavy chain 3 [Caenorhabditis elegans]
Length = 1969
Score = 37.5 bits (85), Expect = 0.13
Identities = 30/121 (24%), Positives = 61/121 (49%), Gaps = 5/121 (4%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEE 236
+ N+ + V L ++ E + + D + E+ ++N L+ L+ ++ LEE
Sbjct: 995 MANQDEAVAKLNKEKKHQEESNRKLNEDLQSEED-----KVNHLEKIRNKLEQQMDELEE 1049
Query: 235 SYNEEKKNITELKNLKQKLEKYNKKLAD-----AEKVRDHYTALEIKHEILPHIHKKISE 71
+ + EK++ +++ K+K+E K + ++ D T L+ K E L H + K++E
Sbjct: 1050 NIDREKRSRGDIEKAKRKVEGDLKVAQENIDEITKQKHDVETTLKRKEEDLHHTNAKLAE 1109
Query: 70 LESIKA 53
SI A
Sbjct: 1110 NNSIIA 1115
>gi|3057072 (AF013962) TsJ5 [Trichinella spiralis]
Length = 675
Score = 37.5 bits (85), Expect = 0.13
Identities = 41/154 (26%), Positives = 71/154 (45%), Gaps = 10/154 (6%)
Query: 565 ERFEAHHGVKISDDALVFAVKSSKKYIS----------NRRLPDIAIDLVDSACSSAIVN 416
E+ + G K++ A A+KSS K + + P I +S+ + V
Sbjct: 248 EKVGSAAGKKVNRKAAEVAIKSSPKPETPKPEVQEKSPKKESPKDKIKQKNSSITKISVK 307
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEE 236
E ES ++L+++ VE ++ ++ D +EKT K ++N K +
Sbjct: 308 KEVESGTASLLEDEELEVEGVVRNLKEDVRKEKT----------KNEMKNKKGK----NA 353
Query: 235 SYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHE 104
+EE KN E+KN K K E N+K + K+ E++ E
Sbjct: 354 IEHEESKN--EMKNKKVKSEVKNEKAKNEMKIEKIIKKEEVEEE 395
>gi|3879709|emb|CAB03330| (Z81118) Similarity to Human endosomal protein P162 (TR:Q15075);
cDNA EST EMBL:Z14487 comes from this gene; cDNA EST
EMBL:Z14556 comes from this gene; cDNA EST EMBL:D27011
comes from this gene; cDNA EST EMBL:D27015 comes from
t...
Length = 1164
Score = 37.5 bits (85), Expect = 0.13
Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 11/185 (5%)
Query: 571 LRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPV 392
L++R E ++ + VF + +K+ + +RL D + D+ + +N NE Q +
Sbjct: 322 LKQRNERVVQLEARIEENVFELSENKQNV--KRLEDKVQESQDALQMLSNINGSNEEQMI 379
Query: 391 TMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPL------EESY 230
+ L + E K IE +E EK + R+ L++ +L NEL + E S
Sbjct: 380 S-LNSKFERNTAERKRIEAVFE-EKVTVQGERLKTLEMANLDLTNELASMGSLLDKERSL 437
Query: 229 NEEK-KNITE----LKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELE 65
EEK K I+E + +LK+KL + KK A K ++ L+ +++ ++ ++++L+
Sbjct: 438 LEEKNKEISERDSSINDLKEKLAESEKK---ATKYKNE---LKEHADLVENLTLQLNKLQ 491
Query: 64 SIKAVVTSKDIAEIIS 17
SKD+ E IS
Sbjct: 492 E-----NSKDLMEKIS 502
Score = 31.7 bits (70), Expect = 7.3
Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
Query: 430 SAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNEL 251
S + L+ E + + +E+ + E+E + ++ D L A L+ ENL +++
Sbjct: 785 SQLEELKTEVERLIRSEEEK-TQEIEKLKSAVTATTQERDELTATSESLRTECENLNSKI 843
Query: 250 IPLEES--YNEEK--KNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHK 83
+EES + EEK +N+ + K +LEK + + + ++ E L
Sbjct: 844 QSIEESRRHAEEKGSENLERMITEKSRLEK---------DIEERESTIQSIQEALETKDN 894
Query: 82 KISELESIKAVVTSKDIAEIISRLTRI 2
+I L++ + VV E++S+++ I
Sbjct: 895 EIESLKTTQRVVED----ELVSKISHI 917
>gi|3282121 (AF012285) Cse15 [Bacillus subtilis]
Length = 157
Score = 37.5 bits (85), Expect = 0.13
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 403 SQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNE 224
SQ LK ++ I +E Y +K + L D+K L+ L EL +
Sbjct: 12 SQENLYLKSELSRCHKLISELEASYFHQKNNKLLKENTDMKEKLQQLSAELTHMSTKEKH 71
Query: 223 EKKNITELKNLKQKL-------------EKYNKKLADAEKVRDHYTALEIKHEILPHIHK 83
L ++ +L E Y ++ EK + H ++I+ E ++HK
Sbjct: 72 ASHTSQTLHQIRAELLDKIVVLQELLSAETYKRRAEIEEKHKLHIAKVKIEEEN-KNLHK 130
Query: 82 KISELESI-----KAVVTSKDIAEII 20
+ISEL++ A++ +K AE+I
Sbjct: 131 RISELQASIEQEQNALLQAKQQAELI 156
>gi|3878549|emb|CAB01576| (Z78199) similar to myosin heavy chain; cDNA EST EMBL:M75783 comes
from this gene; cDNA EST EMBL:D26747 comes from this
gene; cDNA EST EMBL:D26751 comes from this gene; cDNA EST
EMBL:D26750 comes from this gene; cDNA EST EMBL:D...
Length = 1992
Score = 37.5 bits (85), Expect = 0.13
Identities = 30/121 (24%), Positives = 61/121 (49%), Gaps = 5/121 (4%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEE 236
+ N+ + V L ++ E + + D + E+ ++N L+ L+ ++ LEE
Sbjct: 1018 MANQDEAVAKLNKEKKHQEESNRKLNEDLQSEED-----KVNHLEKIRNKLEQQMDELEE 1072
Query: 235 SYNEEKKNITELKNLKQKLEKYNKKLAD-----AEKVRDHYTALEIKHEILPHIHKKISE 71
+ + EK++ +++ K+K+E K + ++ D T L+ K E L H + K++E
Sbjct: 1073 NIDREKRSRGDIEKAKRKVEGDLKVAQENIDEITKQKHDVETTLKRKEEDLHHTNAKLAE 1132
Query: 70 LESIKA 53
SI A
Sbjct: 1133 NNSIIA 1138
>gi|2132082|pir||S67087 hypothetical protein YOR195w - yeast (Saccharomyces cerevisiae)
>gi|1420465|emb|CAA99408| (Z75103) ORF YOR195w
[Saccharomyces cerevisiae]
Length = 821
Score = 37.5 bits (85), Expect = 0.13
Identities = 32/108 (29%), Positives = 60/108 (54%), Gaps = 11/108 (10%)
Query: 385 LKEQMWSVELEIKAIEIDYE--REKTDILAARINDLKIHLENLKNELIPLEESYNEEKKN 212
LK+Q+ S + E K + YE ++ I A + +L +E+LK + LEE+
Sbjct: 567 LKKQITSKDDEFKMWQSKYETVEDEAKIRNAEVTELNGDIEDLKESKLHLEET------- 619
Query: 211 ITELKNLKQKLE--------KYNKKLADAEKVRDHYTALEIKH-EILPHIHKKISELES 62
ITEL+N KLE K+ K + E ++ + ++ +H + L ++H+ + L++
Sbjct: 620 ITELENKVHKLENECELEKQKFEKTSLELESLQLKNSNIQAEHIKELENLHENLISLQN 678
>gi|4038508|emb|CAA90998| (Z54238) Weak similarity to myosin proteins; cDNA EST EMBL:D32964
comes from this gene; cDNA EST EMBL:D34392 comes from
this gene; cDNA EST EMBL:D36037 comes from this gene;
cDNA EST EMBL:D35681 comes from this gene; cDNA EST E...
Length = 2331
Score = 37.5 bits (85), Expect = 0.13
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 346 AIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNI------TELKNLKQ 185
A+++D REK ++L A+I +L+ L+N P EE ++ N+ +L N +Q
Sbjct: 2167 AVQMDKYREKCEVLTAKIAELEAQLQN------PAEEDQQQKTSNVELVKLRQQLANAQQ 2220
Query: 184 KLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISEL 68
+ N ++D E + E +H+I K I EL
Sbjct: 2221 DMRVQNLTISDREGL-----IAEYRHQIAEQT-KTIEEL 2253
>gi|1621445 (U72072) sporulation protein Cse15 [Bacillus subtilis]
Length = 321
Score = 37.5 bits (85), Expect = 0.13
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 403 SQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNE 224
SQ LK ++ I +E Y +K + L D+K L+ L EL +
Sbjct: 12 SQENLYLKSELSRCHKLISELEASYFHQKNNKLLKENTDMKEKLQQLSAELTHMSTKEKH 71
Query: 223 EKKNITELKNLKQKL-------------EKYNKKLADAEKVRDHYTALEIKHEILPHIHK 83
L ++ +L E Y ++ EK + H ++I+ E ++HK
Sbjct: 72 ASHTSQTLHQIRAELLDKIVVLQELLSAETYKRRAEIEEKHKLHIAKVKIEEEN-KNLHK 130
Query: 82 KISELESI-----KAVVTSKDIAEII 20
+ISEL++ A++ +K AE+I
Sbjct: 131 RISELQASIEQEENALLQAKQQAELI 156
>gi|2633796|emb|CAB13298| (Z99111) alternate gene name: cse15; similar to sporulation protein
sigma-E-controlled [Bacillus subtilis]
Length = 321
Score = 37.5 bits (85), Expect = 0.13
Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 403 SQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNE 224
SQ LK ++ I +E Y +K + L D+K L+ L EL +
Sbjct: 12 SQENLYLKSELSRCHKLISELEASYFHQKNNKLLKENTDMKEKLQQLSAELTHMSTKEKH 71
Query: 223 EKKNITELKNLKQKL-------------EKYNKKLADAEKVRDHYTALEIKHEILPHIHK 83
L ++ +L E Y ++ EK + H ++I+ E ++HK
Sbjct: 72 ASHTSQTLHQIRAELLDKIVVLQELLSAETYKRRAEIEEKHKLHIAKVKIEEEN-KNLHK 130
Query: 82 KISELESI-----KAVVTSKDIAEII 20
+ISEL++ A++ +K AE+I
Sbjct: 131 RISELQASIEQEQNALLQAKQQAELI 156
>gi|1208481|dbj|BAA10649| (D64004) hypothetical protein [Synechocystis sp.]
Length = 173
Score = 37.5 bits (85), Expect = 0.13
Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 307 LAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEK----V 140
L A++N +K L+ KN+ L+E +EKK ++K L+Q L++ ++ + + V
Sbjct: 48 LQAQLNSIKAALQAEKNQGEKLKEQLQQEKKAQEKVKQLEQSLKQEQARVKELQNEVQLV 107
Query: 139 RDHYTALEIKHEILPHIHKKISELE 65
T L+ + ++ ++ KI +LE
Sbjct: 108 EKLQTELKEEKNLVGKLYSKIQDLE 132
>gi|1661003|dbj|BAA13639| (D88539) synaptonemal complex protein 1 [Mus musculus]
Length = 693
Score = 37.1 bits (84), Expect = 0.17
Identities = 51/224 (22%), Positives = 97/224 (42%), Gaps = 7/224 (3%)
Query: 835 QIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASGKIKCIGATTFYEYRKYIE 656
Q E++ S+ +E N ++ N+LK + A K T YEY + E
Sbjct: 55 QFENEKVSLKLEEEIQENKDLIKENNATIHWCNLLKETCARSAEK----TNKYEYERE-E 109
Query: 655 NDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKISDDALVFAVKSSKKYISNR 476
Q + N+ + ++ ++ R E H +K + + + +K ++N+
Sbjct: 110 TRQVYVD--LNSNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYQKEVNNK 167
Query: 475 RLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSV--ELEIKAIEIDYE----REKT 314
++ L+ SA EN+ + +T L E+ +LE K D EK
Sbjct: 168 E-NQVSELLIQSA------EKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELSEKK 220
Query: 313 DILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ-KLEKYNK 164
D L + + D+K+ ++ + LEE K I++L +K+ ++E+ NK
Sbjct: 221 DHLTSELEDIKMSMQRSMSTQKALEEDLQIATKTISQLTEVKEAQMEELNK 271
>gi|662259 (L39769) ORF1 [Plasmid pIP501]
Length = 654
Score = 37.1 bits (84), Expect = 0.17
Identities = 36/130 (27%), Positives = 60/130 (45%), Gaps = 9/130 (6%)
Query: 406 ESQPVTM-LKEQMWSVELEIKAIEIDYEREKTDILAARINDLKI----HLENLKNELIPL 242
+ Q VT+ +K W + + I D+ + L R D +I H E K EL +
Sbjct: 164 KGQRVTVSIKTNDWGRKSLVSEIRKDWADKVNQYLKDRNIDQQITEKSHAELGKKELPTI 223
Query: 241 EESYN----EEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKIS 74
E + E+K I+ELK +++ YN LA+ +K+ + L+ K S
Sbjct: 224 HEGFYSKKLEDKGVISELKRKNLEIQSYNDILAELDKLENQEKVLKQDQNFTLKFEKTFS 283
Query: 73 ELESIKAVVTSKDIAEIIS 17
LE + SK++ I+
Sbjct: 284 PLEKGELKNLSKELKLFIN 302
>gi|3024612|sp|Q62209|SCP1_MOUSE SYNAPTONEMAL COMPLEX PROTEIN 1 (SCP-1 PROTEIN)
>gi|1083521|pir||S49461 synaptonemal complex protein 1 -
mouse >gi|558603|emb|CAA86262| (Z38118) synaptonemal
complex protein 1 [Mus musculus]
Length = 993
Score = 37.1 bits (84), Expect = 0.17
Identities = 51/224 (22%), Positives = 97/224 (42%), Gaps = 7/224 (3%)
Query: 835 QIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASGKIKCIGATTFYEYRKYIE 656
Q E++ S+ +E N ++ N+LK + A K T YEY + E
Sbjct: 149 QFENEKVSLKLEEEIQENKDLIKENNATIHWCNLLKETCARSAEK----TNKYEYERE-E 203
Query: 655 NDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKISDDALVFAVKSSKKYISNR 476
Q + N+ + ++ ++ R E H +K + + + +K ++N+
Sbjct: 204 TRQVYVD--LNSNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYQKEVNNK 261
Query: 475 RLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSV--ELEIKAIEIDYE----REKT 314
++ L+ SA EN+ + +T L E+ +LE K D EK
Sbjct: 262 E-NQVSELLIQSA------EKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELSEKK 314
Query: 313 DILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ-KLEKYNK 164
D L + + D+K+ ++ + LEE K I++L +K+ ++E+ NK
Sbjct: 315 DHLTSELEDIKMSMQRSMSTQKALEEDLQIATKTISQLTEVKEAQMEELNK 365
>gi|2649562 (AE001032) purine NTPase, putative [Archaeoglobus fulgidus]
Length = 886
Score = 37.1 bits (84), Expect = 0.17
Identities = 35/126 (27%), Positives = 73/126 (57%), Gaps = 12/126 (9%)
Query: 382 KEQMWSVELEIKAIEIDYEREKTDI--LAARINDLKIH---LENLKN-------ELIPLE 239
K ++ + EIK+IE E+ ++ L +R+ +L+ H LE+L+ E+ LE
Sbjct: 193 KAEIERISEEIKSIESLREKLSEEVRNLESRLKELEEHKSRLESLRKQESSVLQEVRGLE 252
Query: 238 ESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESI 59
E E +K + E+ + LEK K++ + + + Y+ LE ++L I++ + ++E
Sbjct: 253 EKLRELEKQLKEVVERIEDLEKKAKEVKELKPKAERYSILE---KLLSEINQALRDVEKR 309
Query: 58 KAVVTSKDIAEIISRLTR 5
+ +T ++ A I ++L +
Sbjct: 310 EGDLT-REAAGIQAQLKK 326
>gi|1206021 (U48362) hook [Drosophila melanogaster] >gi|3005089|gb|AAC09300|
(AF044925) hook protein [Drosophila melanogaster]
Length = 679
Score = 37.1 bits (84), Expect = 0.17
Identities = 44/178 (24%), Positives = 81/178 (44%), Gaps = 7/178 (3%)
Query: 547 HGVKISDDALVFAV--KSSKKYISNRRLPDIAID-LVDSACSSAIVNLENESQPVTMLKE 377
H I DD + S +Y RR D+ + L+ S + + ++ + Q +L
Sbjct: 230 HSTVIGDDGVSLGPVQTGSVRYNELRRQLDLLKEELLQSEGARKDLKIKAQQQDTDLLHM 289
Query: 376 QMWSVELEIKAIEIDYEREKTDILAARINDLKI---HLENLKNELIPLEESYNEEKKNIT 206
QM EL + E+ +++ D+L + LKI L+ K +L E YN+ KK +
Sbjct: 290 QMRIEELMKSSAEVTTLKDEVDVLRESNDKLKICEAQLDTYKKKL----EDYNDLKKQVK 345
Query: 205 ELKNLKQKLEKYNKKL-ADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDIA 29
L+ + N + DA++ + +E+ + + +H K+ + ES K V D
Sbjct: 346 ILEERSADYVQQNAQFEEDAKRYANTKGQVELFKKEIQDLHAKL-DAESSKNVKLEFDNK 404
Query: 28 EIISR 14
+ S+
Sbjct: 405 NLESK 409
>gi|60607|emb|CAA49168| (X69325) A-type inclusion protein [Ectromelia virus]
>gi|745132|prf||2015432A A type inclusion body protein
[Ectromelia virus]
Length = 1049
Score = 37.1 bits (84), Expect = 0.17
Identities = 52/211 (24%), Positives = 95/211 (44%), Gaps = 26/211 (12%)
Query: 763 NEGSLDCTNMLKP--SLASGKIKCIGAT-----TFYEYRKYIENDQALARRFVKINVPEP 605
NE TN +K + G C G T E R+ ++ ++ + K
Sbjct: 459 NERIEQLTNEIKELRDMGGGSNNCSGLAEIDKKTIKELRESLDREREMRAELEK---ELD 515
Query: 604 TISDGITILRGLRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSA 425
TI +G RE + +K D+ L V+ K+ + R L + D+ + C+
Sbjct: 516 TIRNGKVDGSSQRELELSRMWLKQRDEDL--RVEIDKRRDAERELSRLRRDITE--CNQY 571
Query: 424 IVNLENESQPVTMLKEQMWSVELEIKAI---------EIDYEREKTDILAARINDLKIHL 272
+L+ + + ++ S+E EI E++ ER T L ++N+ +
Sbjct: 572 KEDLDKANITIMTYTNRVTSLESEIARYQQNLSVAHRELEDERRNTRDLENKLNECMRNQ 631
Query: 271 EN------LKNELIPLEESYNE----EKKNITELKNLKQKLEKYNKKLADAEKVRDH 131
EN L++ + LE ++ NITE+ LK ++ ++L D + DH
Sbjct: 632 ENTQEVEALRSRIKDLENKLSDCMDNGGNNITEINRLKSRITDLERQLTDCRRNNDH 688
>gi|735904 (L41069) testicular protein [Mus musculus]
Length = 1029
Score = 37.1 bits (84), Expect = 0.17
Identities = 51/224 (22%), Positives = 97/224 (42%), Gaps = 7/224 (3%)
Query: 835 QIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASGKIKCIGATTFYEYRKYIE 656
Q E++ S+ +E N ++ N+LK + A K T YEY + E
Sbjct: 185 QFENEKVSLKLEEEIQENKDLIKENNATIHWCNLLKETCARSAEK----TNKYEYERE-E 239
Query: 655 NDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKISDDALVFAVKSSKKYISNR 476
Q + N+ + ++ ++ R E H +K + + + +K ++N+
Sbjct: 240 TRQVYVD--LNSNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYQKEVNNK 297
Query: 475 RLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSV--ELEIKAIEIDYE----REKT 314
++ L+ SA EN+ + +T L E+ +LE K D EK
Sbjct: 298 E-NQVSELLIQSA------EKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELSEKK 350
Query: 313 DILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ-KLEKYNK 164
D L + + D+K+ ++ + LEE K I++L +K+ ++E+ NK
Sbjct: 351 DHLTSELEDIKMSMQRSMSTQKALEEDLQIATKTISQLTEVKEAQMEELNK 401
>gi|3024541|sp|O42184|REST_CHICK RESTIN >gi|2338714 (AF014012) restin [Gallus gallus]
Length = 1433
Score = 37.1 bits (84), Expect = 0.17
Identities = 27/120 (22%), Positives = 59/120 (48%), Gaps = 1/120 (0%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEE 236
L+ +T +K+QM + + + K ++ YE+E ++++ D+K K L+ EE
Sbjct: 985 LKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIK----GFKQNLLDAEE 1040
Query: 235 SYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIH-KKISELESI 59
+ +K EL+ ++L+K ++ ++ + +E + IH +KI L S+
Sbjct: 1041 ALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVTKEKDAIHQEKIETLASL 1100
Query: 58 K 56
+
Sbjct: 1101 E 1101
Score = 36.0 bits (81), Expect = 0.37
Identities = 26/109 (23%), Positives = 56/109 (50%), Gaps = 1/109 (0%)
Query: 364 VELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ 185
++ +++ +++DYE E +++ + N+ HL+ ++ L E E+++ L+NLK
Sbjct: 649 LKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQT---LENLKA 705
Query: 184 KLEKY-NKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSK 38
KLE ++ L + E + EIK + L + K +E + +T +
Sbjct: 706 KLESVEDQHLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQ 755
Score = 33.6 bits (75), Expect = 1.9
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 361 ELEIKAIEIDYER----EKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKN 194
E EIK E+D + E+T ++ + ++ E L +L L+++ +E K I +L
Sbjct: 727 EAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLL-DLAALQKANSEGKLEIQKLSE 785
Query: 193 LKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIK 56
Q EK + L + EKV + L+ K + L + K +S + +K
Sbjct: 786 QLQAAEKQIQNL-ETEKVSNLTKELQGKEQKLLDLEKNLSAVNQVK 830
>gi|2905649 (AF045650) cytoplasmic linker protein CLIP-170 [Gallus gallus]
Length = 1099
Score = 37.1 bits (84), Expect = 0.17
Identities = 27/120 (22%), Positives = 59/120 (48%), Gaps = 1/120 (0%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEE 236
L+ +T +K+QM + + + K ++ YE+E ++++ D+K K L+ EE
Sbjct: 951 LKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIK----GFKQNLLDAEE 1006
Query: 235 SYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIH-KKISELESI 59
+ +K EL+ ++L+K ++ ++ + +E + IH +KI L S+
Sbjct: 1007 ALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVTKEKDAIHQEKIETLASL 1066
Query: 58 K 56
+
Sbjct: 1067 E 1067
Score = 36.0 bits (81), Expect = 0.37
Identities = 26/109 (23%), Positives = 56/109 (50%), Gaps = 1/109 (0%)
Query: 364 VELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ 185
++ +++ +++DYE E +++ + N+ HL+ ++ L E E+++ L+NLK
Sbjct: 609 LKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQT---LENLKA 665
Query: 184 KLEKY-NKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSK 38
KLE ++ L + E + EIK + L + K +E + +T +
Sbjct: 666 KLESVEDQHLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQ 715
Score = 31.3 bits (69), Expect = 9.5
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 361 ELEIKAIEIDYER----EKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKN 194
E EIK E+D + E+T ++ + ++ E L +L L+++ +E K I +L
Sbjct: 687 EAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLL-DLAALQKANSEGKLEIQKLSE 745
Query: 193 LKQKLEKY-----NKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIK 56
Q EK +K+ + KV + L+ K + L + K +S + +K
Sbjct: 746 QLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVK 796
>gi|1151158 (U43145) repeat organellar protein [Plasmodium chabaudi]
Length = 1939
Score = 37.1 bits (84), Expect = 0.17
Identities = 30/103 (29%), Positives = 56/103 (54%)
Query: 340 EIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKK 161
+I+ +++ + I DLK + +L NELI LE N + E NLK+++E + K
Sbjct: 1248 KIEMYKKEIEDNGKNIEDLKNKILDLSNELINLE---NMKNVLTDENNNLKKEIEIKDNK 1304
Query: 160 LADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDI 32
L + EK ++ L + +I+ + K+ISE + + +T ++I
Sbjct: 1305 LNEKEK-NENTEILNLNDDII-KLKKEISEWKDEEEKLTKENI 1345
>gi|2749771|dbj|BAA24108| (AB000619) tsec-1 [Mus musculus]
Length = 347
Score = 37.1 bits (84), Expect = 0.17
Identities = 35/169 (20%), Positives = 83/169 (48%)
Query: 532 SDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE 353
SD +L + + + LP+ A D DS C + ++ E+Q + LK ++ ++ E
Sbjct: 163 SDFSLAKTISRIEGQLDEDGLPECAED--DSFCGVS-KDIGTEAQ-IRFLKAKLHVMQEE 218
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+ ++ + +++ +I DLK ++NL+ + + + + ++ I + KNL E+
Sbjct: 219 LDSVVCECSKKED-----KIQDLKSKVKNLEEDCVRQQRTVTSQQSQIEKYKNL---FEE 270
Query: 172 YNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDIAE 26
NKK ++++ +++E + E + K+ + +S V ++ + E
Sbjct: 271 ANKK---CDELQQQLSSVERELESKRRLQKQAASSQSATEVRLNRALEE 316
>gi|3041710|sp|Q01202|MYSP_BRUMA PARAMYOSIN >gi|1679786 (U77590) paramyosin [Brugia malayi]
Length = 880
Score = 37.1 bits (84), Expect = 0.17
Identities = 28/112 (25%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 400 QPVTMLKEQMWSVELEIKAIEIDYEREKTDI---------LAARINDLKIHLENLKNELI 248
Q ++ L++ ++ E++ + +D E+ + I L +N+LK+ ++ L EL
Sbjct: 341 QKISQLEKAKSRLQSEVEVLIVDLEKAQNTIAILERAKEQLEKTVNELKVRIDELTVELE 400
Query: 247 PLEESYNEEKKNITELKNLKQKLEKYNKKLA-DAEKVRDHYTALEIKHEILPHIHKKISE 71
+ + +LKNL +K + + LA + +K++D L E L ++K+ E
Sbjct: 401 AAQREARAALAELQKLKNLYEKAVEQKEALARENKKLQDD---LHEAKEALADANRKLHE 457
Query: 70 LE 65
L+
Sbjct: 458 LD 459
>gi|3668187|dbj|BAA33452| (AB017819) myosin heavy chain [Theragra chalcogramma]
Length = 1287
Score = 36.7 bits (83), Expect = 0.22
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 21/145 (14%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + E + + E KA++ +++
Sbjct: 953 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MASQDESVAKLTKEKKALQESHQQTL 1009
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE----------- 176
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 1010 DDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERSKRKLEGDLKLAQETVM 1069
Query: 175 -KYNKKLADAEKVR-------DHYTALEIKHEILPHIHKKISELES 62
N K EK++ H + +E + + + KKI EL++
Sbjct: 1070 DLENDKQQSDEKIKKKDFETSQHLSKIEDEQSLGAQLQKKIKELQA 1115
>gi|2500794|sp|Q90988|SCII_CHICK CHROMOSOME SCAFFOLD PROTEIN SCII >gi|1079384|pir||A54817 ATPase ScII,
chromosomal scaffold - chicken >gi|572692|emb|CAA56767|
(X80792) chicken SCII [Gallus gallus]
Length = 1189
Score = 36.7 bits (83), Expect = 0.22
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 15/99 (15%)
Query: 439 ACSSAIVNLENESQPVTMLKEQ--MWSVELEIKAIEID---YEREKTDILAAR--INDLK 281
A + NL+N ++ LK+Q M S E E+ +I Y +++ D+LA + I + +
Sbjct: 697 ATEKELANLKNMAEKYQHLKQQWEMKSEEAELLQTKIQQSAYHKQQEDLLALKKTIAECE 756
Query: 280 IHLENLKNELIPLEESY--------NEEKKNITELKNLKQKLEKYNKKLADAEK 143
L+ + EE Y N E + E+KN +QKL KK D+ +
Sbjct: 757 ETLKKTEESQRKAEEEYKALENKMKNAEAERGKEIKNAQQKLNSAKKKADDSSR 810
>gi|4107313|emb|CAA22641| (AL035075) putative myosin heavy chain [Schizosaccharomyces pombe]
Length = 1516
Score = 36.7 bits (83), Expect = 0.22
Identities = 52/219 (23%), Positives = 101/219 (45%), Gaps = 25/219 (11%)
Query: 682 FYEYRKYIENDQALARRFV-KINVPEPTISDGITILRGLRERFEAHHGVKISDDALVFAV 506
F + + I Q++ R F+ + + E T D I++ L F+AH K V
Sbjct: 837 FIQTKNSILKVQSIIRGFLLRQTLEEKTKHDATLIIQSLWLTFKAHKHYKELQYYAVRIQ 896
Query: 505 KSSKKYISNRRLPDIAIDL------------VDSACSSAIVNLENESQPVTMLKEQMWSV 362
+ ++ R+L ++ I+ ++S L+N Q +E++ +
Sbjct: 897 SLWRMKLAKRQLTELKIESTKASHLKQVSYRLESRLFEISKQLDNSEQENNKFRERIAEL 956
Query: 361 ELEIK-----AIEIDYEREKTDILAA---RINDLKIHLENLKNELIPLEESYNEEKKNIT 206
E + + + E E+T +L + + +LK LE +N LI +EE + T
Sbjct: 957 ESHLSNYAEAKLAQERELEQTRVLISDQSQDGELKELLEEKENALIMMEEEMRQVNDANT 1016
Query: 205 EL----KNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSK 38
EL LK +L+ Y+ + + + L+ K+ I+ + K L S ++ S+
Sbjct: 1017 ELLRVNATLKSQLKNYDMIIV------EQTSQLKEKNRIIASLTKATKILNSASSIEQSR 1070
Query: 37 DIAE 26
+ E
Sbjct: 1071 NSEE 1074
>gi|4493894|emb|CAB39003| (AL034558) predicted using hexExon; MAL3P2.16 (PF0235w),
Hypothetical protein, len: 1214 aa [Plasmodium
falciparum]
Length = 1213
Score = 36.7 bits (83), Expect = 0.22
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 9/81 (11%)
Query: 307 LAARINDLKIHLENLKNELIPLEESYN----EEKKNITEL----KNLKQKLEKYNKKLAD 152
L INDLK +EN+K E I L + KK + EL KN +++++ Y KL +
Sbjct: 549 LLDEINDLKNTIENMKKEKINLLSKFKAYTLNNKKELEELKIKCKNKEEQIKMYENKLQN 608
Query: 151 AE-KVRDHYTALEIKHEILPHIHKKISELE 65
E ++ ++ ++ K + + H K+ E
Sbjct: 609 KEDEIMNYVNEIQNKDKKIESYHIKLHNKE 638
>gi|2088796 (AF003150) weak similarity to the bZIP superfamily of eukaryotic
DNA-binding transcription factors [Caenorhabditis
elegans]
Length = 381
Score = 36.7 bits (83), Expect = 0.22
Identities = 17/59 (28%), Positives = 38/59 (63%), Gaps = 4/59 (6%)
Query: 325 REKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKN----LKQKLEKYNKKL 158
+++ D+L IN+ ++ + L+++++ L+ N+ K + E+KN LK +LE+ K
Sbjct: 246 KQEKDVLVHEINEREVRILCLRSDILTLKSENNDTSKELDEMKNGTKALKHELEETKKMK 305
Query: 157 ADA 149
++A
Sbjct: 306 SEA 308
Score = 32.1 bits (71), Expect = 5.6
Identities = 22/72 (30%), Positives = 39/72 (53%), Gaps = 9/72 (12%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNIT--------- 206
LE K +++ E +K+ + LK L + EE Y+E+K N+
Sbjct: 134 LEKKVEDLNGEHQKS------LEKLKERLHEKDAFIEACEEFYDEKKINVNKMTLMKQEM 187
Query: 205 ELKNLKQKLEKYNKKLADAEK 143
ELK +K+ E+Y +++ + EK
Sbjct: 188 ELKRIKKNFEEYKERMTEVEK 208
>gi|2204269|emb|CAA97648| (Z73259) ORF YLR086w [Saccharomyces cerevisiae]
Length = 1162
Score = 36.7 bits (83), Expect = 0.22
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDI---LAARINDLKIHLENLKNELIP 245
L+N + V + +++ +E ++K ++ T++ L ++ +LK E LK ++
Sbjct: 760 LQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLKV-ELKEQSEQLKEQMED 818
Query: 244 LEESYNEEKKNITELKNLKQKLEKYNKKL 158
+EES NE K E+KN KLEK N L
Sbjct: 819 MEESINEFKSIEIEMKN---KLEKLNSLL 844
Score = 32.1 bits (71), Expect = 5.6
Identities = 45/200 (22%), Positives = 80/200 (39%), Gaps = 8/200 (4%)
Query: 604 TISDGITILRGLRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSA--CS 431
+IS+ +L LR + + H +I D + + S L DI + L D S
Sbjct: 241 SISEAENMLEELRGQ-QTEHETEIKDLTQLLEKERSI-------LDDIKLSLKDKTKNIS 292
Query: 430 SAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNEL 251
+ I+ E E +P W ++L+ K +I + +L LK +
Sbjct: 293 AEIIRHEKELEP--------WDLQLQEKESQIQLAESELSLLEET-------QAKLKKNV 337
Query: 250 IPLEESYNEEKKNITELK----NLKQKLEKYNKKLADAEK--VRDHYTALEIKHEILPHI 89
LEE +K + EL+ +LK+KL + + EK H E++ + H
Sbjct: 338 ETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHR 397
Query: 88 HKKISELESIKAVVTSKDIAEIISRLTR 5
+ + S+ + +SRL +
Sbjct: 398 QRAMEARSSLSKAQNKSKVLTALSRLQK 425
>gi|2425111 (AF019980) ZipA [Dictyostelium discoideum]
Length = 924
Score = 36.7 bits (83), Expect = 0.22
Identities = 40/158 (25%), Positives = 86/158 (54%), Gaps = 26/158 (16%)
Query: 508 VKSSKKYISNR--RLPDIAIDL--VDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAI 341
+KS + +SN+ ++ I DL V SS L++ ++ EQ+ + + +IK+I
Sbjct: 657 LKSKDEQLSNKDSQIKSIESDLQSVKDQLSSKDQELQSTKDQLSSKDEQLSNKDTQIKSI 716
Query: 340 EIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKL------ 179
E D + K D L+++ +L+ + L ++ L+ + ++ EL++ K +L
Sbjct: 717 ESDLQSVK-DQLSSKDQELQSTKDQLSSKDQELQSTKDQLSTKDQELQSAKDQLSCQSST 775
Query: 178 ---------------EKYNKKLADAEKVRDHYTALEIK-HEILPHIHKKISELESIKAVV 47
++ + K ++ + ++D + + + + K SEL+SIK +
Sbjct: 776 TDQLSAKDTELQSTKDQLSSKDSELQSIKDQLSTKDSELQSSKDQLSSKDSELQSIKDQL 835
Query: 46 TSKD 35
+SKD
Sbjct: 836 SSKD 839
Score = 36.4 bits (82), Expect = 0.29
Identities = 33/137 (24%), Positives = 73/137 (53%), Gaps = 17/137 (12%)
Query: 445 DSACSSAIVNLENESQPVTMLKEQMWSVELEIKAI--EIDYEREKTDILAARINDLKI-- 278
D S L ++ Q + K+Q+ + + E+++ ++ + TD L+A+ +L+
Sbjct: 731 DQELQSTKDQLSSKDQELQSTKDQLSTKDQELQSAKDQLSCQSSTTDQLSAKDTELQSTK 790
Query: 277 --------HLENLKNELIPLEESYNEEKKNIT----ELKNLKQKLEKYNKKLADAEKVRD 134
L+++K++L + K ++ EL+++K +L + K +D + V+D
Sbjct: 791 DQLSSKDSELQSIKDQLSTKDSELQSSKDQLSSKDSELQSIKDQL---SSKDSDLQSVKD 847
Query: 133 HYTALEIK-HEILPHIHKKISELESIKAVVTSKD 35
++ + + K EL+S+K +TSKD
Sbjct: 848 QLSSKDSDLQSTKDQLSSKDQELQSVKDELTSKD 881
>gi|2131771|pir||S64918 hypothetical protein YLR086w - yeast (Saccharomyces cerevisiae)
>gi|1256888 (U53880) Ylr086wp [Saccharomyces cerevisiae]
>gi|1360455|emb|CAA97646| (Z73258) ORF YLR086w
[Saccharomyces cerevisiae]
Length = 1418
Score = 36.7 bits (83), Expect = 0.22
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDI---LAARINDLKIHLENLKNELIP 245
L+N + V + +++ +E ++K ++ T++ L ++ +LK E LK ++
Sbjct: 1016 LQNSERDVELSSDELKVIEEQLKHTKLALAENDTNMNETLNLKV-ELKEQSEQLKEQMED 1074
Query: 244 LEESYNEEKKNITELKNLKQKLEKYNKKL 158
+EES NE K E+KN KLEK N L
Sbjct: 1075 MEESINEFKSIEIEMKN---KLEKLNSLL 1100
Score = 32.1 bits (71), Expect = 5.6
Identities = 45/200 (22%), Positives = 80/200 (39%), Gaps = 8/200 (4%)
Query: 604 TISDGITILRGLRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSA--CS 431
+IS+ +L LR + + H +I D + + S L DI + L D S
Sbjct: 497 SISEAENMLEELRGQ-QTEHETEIKDLTQLLEKERSI-------LDDIKLSLKDKTKNIS 548
Query: 430 SAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNEL 251
+ I+ E E +P W ++L+ K +I + +L LK +
Sbjct: 549 AEIIRHEKELEP--------WDLQLQEKESQIQLAESELSLLEET-------QAKLKKNV 593
Query: 250 IPLEESYNEEKKNITELK----NLKQKLEKYNKKLADAEK--VRDHYTALEIKHEILPHI 89
LEE +K + EL+ +LK+KL + + EK H E++ + H
Sbjct: 594 ETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHR 653
Query: 88 HKKISELESIKAVVTSKDIAEIISRLTR 5
+ + S+ + +SRL +
Sbjct: 654 QRAMEARSSLSKAQNKSKVLTALSRLQK 681
>gi|2128750|pir||E64456 hypothetical protein MJ1254 - Methanococcus jannaschii >gi|1591888
(U67566) M. jannaschii predicted coding region MJ1254
[Methanococcus jannaschii]
Length = 469
Score = 36.7 bits (83), Expect = 0.22
Identities = 25/70 (35%), Positives = 40/70 (56%)
Query: 271 ENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPH 92
+N+KNEL L+ E+++ E+KNL K++ KL+ A K L K EI+
Sbjct: 283 KNIKNELTSLKNKLKEKEE---EIKNLAIKIKDLEDKLSKANK------NLLNKDEIISV 333
Query: 91 IHKKISELES 62
++++ISE ES
Sbjct: 334 LNERISEYES 343
>gi|1777305|dbj|BAA19070| (AB000214) myosin heavy chain [Theragra chalcogramma]
Length = 1119
Score = 36.7 bits (83), Expect = 0.22
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 21/145 (14%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + E + + E KA++ +++
Sbjct: 135 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MASQDESVAKLTKEKKALQESHQQTL 191
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE----------- 176
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 192 DDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERSKRKLEGDLKLAQETVM 251
Query: 175 -KYNKKLADAEKVR-------DHYTALEIKHEILPHIHKKISELES 62
N K EK++ H + +E + + + KKI EL++
Sbjct: 252 DLENDKQQSDEKIKKKDFETSQHLSKIEDEQSLGAQLQKKIKELQA 297
>gi|547976|sp|Q02171|MYSP_ONCVO PARAMYOSIN >gi|159922 (M95813) paramyosin [Onchocerca volvulus]
Length = 879
Score = 36.4 bits (82), Expect = 0.29
Identities = 27/112 (24%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 400 QPVTMLKEQMWSVELEIKAIEIDYEREKTDI---------LAARINDLKIHLENLKNELI 248
Q ++ L++ ++ E++ + +D E+ + I L +N+LK+ ++ L EL
Sbjct: 341 QKISQLEKAKSRLQSEVEVLIVDLEKAQNTIAILERAKEQLEKTVNELKVRIDELTVELE 400
Query: 247 PLEESYNEEKKNITELKNLKQKLEKYNKKLA-DAEKVRDHYTALEIKHEILPHIHKKISE 71
+ + ++KNL +K + + LA + +K++D L E L ++K+ E
Sbjct: 401 AAQREARAALAELQKMKNLYEKAVEQKEALARENKKLQDD---LHEAKEALADANRKLHE 457
Query: 70 LE 65
L+
Sbjct: 458 LD 459
>gi|1000094 (U30872) mitosin [Homo sapiens]
Length = 3113
Score = 36.4 bits (82), Expect = 0.29
Identities = 38/135 (28%), Positives = 69/135 (50%), Gaps = 12/135 (8%)
Query: 502 SSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYER 323
S ++ +S+++L IDL+ S+ +L+ +Q + LK+ + ++ + ER
Sbjct: 2733 SKEECLSSQKLE---IDLLKSSKEELNNSLKATTQILEELKKTKMDNLKYVNQLKKENER 2789
Query: 322 E--KTDILAARINDLKIHLENLKNELIPLEESYNEEKKNI----------TELKNLKQKL 179
K +L L+ E L+ EL L+ + ++K TE+K LK+ L
Sbjct: 2790 AQGKMKLLIKSCKQLEEEKEILQKELSQLQAAQEKQKTGTVMDTKVDELTTEIKELKETL 2849
Query: 178 EKYNKKLADAEKVRDHYTALEIKHEIL 98
E+ K +A++ D Y +L I HE L
Sbjct: 2850 EEKTK---EADEYLDKYCSLLISHEKL 2873
Score = 31.3 bits (69), Expect = 9.5
Identities = 29/131 (22%), Positives = 60/131 (45%)
Query: 427 AIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELI 248
A + EN V LK ++ + ++ +E+D + ++ ENL NEL
Sbjct: 2354 AALEAENSKGEVETLKAKIEGMTQSLRGLELD------------VVTIRSEKENLTNELQ 2401
Query: 247 PLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISEL 68
+E +E + + +N+ Q EK +K+ EK TA+E+ L ++++++ L
Sbjct: 2402 KEQERISELEIINSSFENILQ--EKEQEKVQMKEK---SSTAMEMLQTQLKELNERVAAL 2456
Query: 67 ESIKAVVTSKD 35
+ + +K+
Sbjct: 2457 HNDQEACKAKE 2467
>gi|309695 (M77713) major merozoite surface antigen [Plasmodium falciparum]
>gi|309699 (M77715) major merozoite surface antigen
[Plasmodium falciparum] >gi|309704 (M77718) major
merozoite surface antigen [Plasmodium falciparum]
>gi|309706 (M77719) major merozoite surface antigen
[Plasmodium falciparum] >gi|309717 (M77725) major
merozoite surface antigen [Plasmodium falciparum]
Length = 213
Score = 36.4 bits (82), Expect = 0.29
Identities = 34/119 (28%), Positives = 60/119 (49%), Gaps = 7/119 (5%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKK---NITELKNLK 188
L+I+A E+D +L + + L+N+K+ + +E+ + KK NI EL
Sbjct: 54 LKIRANELD-------VLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKKTIENINELIEES 106
Query: 187 QKLEKYNKKLADAEKVRDHYTA---LEIKHEILPHIHKKISELES-IKAVVTSKDIAEII 20
+K NK E+ + Y A L I ++ L H IS LE I + +++I E++
Sbjct: 107 KKTIDKNKNATKEEEKKKLYQAQYDLSIYNKQLEEAHNLISVLEKRIDTLKKNENIKELL 166
Query: 19 SRLTRI 2
++ I
Sbjct: 167 DKINEI 172
>gi|1352931|sp|P47166|YJ9C_YEAST HYPOTHETICAL 81.2 KD PROTEIN IN NMD5-HOM6 INTERGENIC REGION
>gi|1077916|pir||S57157 hypothetical protein YJR134c -
yeast (Saccharomyces cerevisiae)
>gi|1015870|emb|CAA89665| (Z49634) ORF YJR134c
[Saccharomyces cerevisiae]
Length = 707
Score = 36.4 bits (82), Expect = 0.29
Identities = 40/131 (30%), Positives = 67/131 (50%), Gaps = 27/131 (20%)
Query: 454 DLVDSACSSAIVNLENESQPVTMLK---EQMWSVEL---EIKAIEIDYEREKTDILAARI 293
D ++ A ++ IVNLEN + K E+ + L E +++ E+E +
Sbjct: 362 DSIEYALNTKIVNLENRFESTMKEKNDIEEKYQTALRSSETLGKQLEKEKENHSKAVLEV 421
Query: 292 NDLKIHLENLKNELIPLEESYNEEKK-------NITELKN-LKQKLEKYNKKLAD----- 152
DL+ E LK+ L + + YN KK + + +N LK E N+K+ D
Sbjct: 422 KDLERRAETLKSSLQSISDDYNLLKKKYEIQRSQLEQKENELKPHQENSNEKIIDKIPVE 481
Query: 151 --------AEKVRDHYTALEIKHEILPHIHKKISELES 62
+ D +T L ++ +L K+ ELES
Sbjct: 482 LTDSLNSMEGNIEDEWT-LPQENSMLSLSMSKLGELES 518
>gi|1514696 (U58512) Rho-associated, coiled-coil containing protein kinase p160
ROCK-1 [Mus musculus]
Length = 1354
Score = 36.4 bits (82), Expect = 0.29
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 24/140 (17%)
Query: 445 DSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLK---IH 275
+ CS V+L+ Q + L E +E E+K + + E+E L + N+LK
Sbjct: 738 EKQCSMLDVDLKQSQQKLEHLTENKERMEDEVKNLALQLEQESNKRLLLQ-NELKTQAFE 796
Query: 274 LENLKNELIPLEESYNEEKKNITELK-----NLKQKLEKYN------KKLADAEKVRDHY 128
+NLK LE+ +E + E K L Q ++Y ++L D + ++
Sbjct: 797 ADNLKG----LEKQMKQEINTLLEAKRLLEFELAQLTKQYRGNEGQMRELQDQLEAEQYF 852
Query: 127 TAL------EIKHEILPHIH---KKISELESIKAVV-TSKDIAE 26
+ L E+K EI +KI EL+S K + T D+AE
Sbjct: 853 STLYKTQVKELKEEIEEKNRENLRKIQELQSEKETLSTQLDLAE 896
Score = 32.8 bits (73), Expect = 3.2
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Query: 514 FAVKSSKKYI------SNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMW----- 368
F S+++Y+ NR ++ L +S I LE + LK++M
Sbjct: 397 FTYYSNRRYLPSANASENRSSSNVDKSLQESL-QKTIYKLEEQLHNEMQLKDEMEQKCRT 455
Query: 367 -SVELEIKAIEIDYE---REKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNI-TE 203
+++L+ E+D E R + ++I K+ L++ NE E NE+++NI E
Sbjct: 456 SNLKLDKIMKELDEEGNQRRNLESAVSQIEKEKMLLQHRINEYQRKVEQENEKRRNIENE 515
Query: 202 LKNLKQKLEKYNKKLADAEKVRDHYTALE 116
+ LK +LE K ++ + T L+
Sbjct: 516 VSTLKDQLEDLRKASQTSQLANEKLTQLQ 544
>gi|2498536|sp|P55937|G160_MOUSE GOLGIN-160 (MALE-ENHANCED ANTIGEN-2) (MEA-2)
>gi|1944344|dbj|BAA19612| (D78270) male-enhanced
antigen-2 [Mus musculus]
Length = 1325
Score = 36.4 bits (82), Expect = 0.29
Identities = 36/138 (26%), Positives = 73/138 (52%), Gaps = 9/138 (6%)
Query: 556 EAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENE--SQPVTML 383
EA+ S D L+ +K++KK + + + ++ +L+ V +E+ + ++++
Sbjct: 687 EAYRRDATSKDQLINELKATKKRLDSE-MKELRQELIKLQGEKKTVEVEHSRLQKDMSLV 745
Query: 382 KEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENL-----KNELIP--LEESYNE 224
+QM +E +++++ ER++ +I + LK E + NE + +EE E
Sbjct: 746 HQQMAELEGHLQSVQ--KERDEMEI---HLQSLKFDKEQMIALTEANETLKKQIEELQQE 800
Query: 223 EKKNITELKNLKQKLEKYNKKLADAEK 143
KK ITE KQK+++ L A+K
Sbjct: 801 AKKAITE---QKQKMKRLGSDLTSAQK 824
>gi|2224697|dbj|BAA20832| (AB002376) KIAA0378 [Homo sapiens]
Length = 808
Score = 36.4 bits (82), Expect = 0.29
Identities = 33/110 (30%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 394 VTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKK 215
+ LK+++ E E+ A++ K + L+ + +D K H+E LK L E+ +
Sbjct: 287 IDQLKQELSKKESELLALQT-----KLETLSNQNSDCKQHIEVLKESLTAKEQRAAILQT 341
Query: 214 NITELK-NLKQK---LEKYNKKLAD--------AEKVRDHYTALEIKHEILPHIHKKISE 71
+ L+ L++K L K K+L D A ++RD LE+K + + KKI
Sbjct: 342 EVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMKDMLEVKERKINVLQKKIEN 401
Query: 70 LE 65
L+
Sbjct: 402 LQ 403
>gi|1346587|sp|P04933|MSP1_PLAFW MEROZOITE SURFACE PROTEIN 1 PRECURSOR (MEROZOITE SURFACE ANTIGENS)
(PMMSA) (P195) >gi|102354|pir||S05603 major merozoite
surface antigen precursor - Plasmodium falciparum
(strain Palo Alto PLF-3/B11) >gi|9865|emb|CAA26676|
(X02919) P195 precursor [Plasmodium falciparum]
>gi|9897|emb|CAA33163| (X15063) gp195 surface antigen
preprotein [Plasmodium falciparum]
Length = 1639
Score = 36.4 bits (82), Expect = 0.29
Identities = 34/119 (28%), Positives = 60/119 (49%), Gaps = 7/119 (5%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKK---NITELKNLK 188
L+I+A E+D +L + + L+N+K+ + +E+ + KK NI EL
Sbjct: 207 LKIRANELD-------VLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKKTIENINELIEES 259
Query: 187 QKLEKYNKKLADAEKVRDHYTA---LEIKHEILPHIHKKISELES-IKAVVTSKDIAEII 20
+K NK E+ + Y A L I ++ L H IS LE I + +++I E++
Sbjct: 260 KKTIDKNKNATKEEEKKKLYQAQYDLSIYNKQLEEAHNLISVLEKRIDTLKKNENIKELL 319
Query: 19 SRLTRI 2
++ I
Sbjct: 320 DKINEI 325
>gi|3218398|emb|CAA19588| (AL023860) coiled coil protein [Schizosaccharomyces pombe]
Length = 1837
Score = 36.4 bits (82), Expect = 0.29
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 14/117 (11%)
Query: 385 LKEQMWSVELEIKAIEIDYER--EKTDILAARINDLKIHLENLKNEL-------IPLEES 233
LK+ ++E E + +E + ++TD ++N L +ENLK E+ L +
Sbjct: 1357 LKKNCEALEKEKQELETKLQETAKETDTFKQQVNSLNEEVENLKKEVEQANTKNTRLAAA 1416
Query: 232 YNEE-----KKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISEL 68
+NE+ K ++T +LKQ+L NK+L + A++ + E L + ++ E
Sbjct: 1417 WNEKCENLKKSSLTRFAHLKQELTNKNKELTSKNAENE---AMQKEIESLKDSNHQLQES 1473
Query: 67 ESIKAVVTSKD 35
S A +K+
Sbjct: 1474 ASSDAEQITKE 1484
>gi|4455909|emb|CAB36903| (AJ131294) major surface protein-1 [Cloning vector
pBSK*-MSP-1s/FCB]
Length = 1639
Score = 36.4 bits (82), Expect = 0.29
Identities = 34/119 (28%), Positives = 60/119 (49%), Gaps = 7/119 (5%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKK---NITELKNLK 188
L+I+A E+D +L + + L+N+K+ + +E+ + KK NI EL
Sbjct: 207 LKIRANELD-------VLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKKTIENINELIEES 259
Query: 187 QKLEKYNKKLADAEKVRDHYTA---LEIKHEILPHIHKKISELES-IKAVVTSKDIAEII 20
+K NK E+ + Y A L I ++ L H IS LE I + +++I E++
Sbjct: 260 KKTIDKNKNATKEEEKKKLYQAQYDLSIYNKQLEEAHNLISVLEKRIDTLKKNENIKELL 319
Query: 19 SRLTRI 2
++ I
Sbjct: 320 DKINEI 325
>gi|84241|pir||A24594 probable major surface antigen (83K, 19K, 42K) precursor -
Plasmodium falciparum >gi|224673|prf||1110241A protein
P195 [Plasmodium falciparum]
Length = 1640
Score = 36.4 bits (82), Expect = 0.29
Identities = 34/119 (28%), Positives = 60/119 (49%), Gaps = 7/119 (5%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKK---NITELKNLK 188
L+I+A E+D +L + + L+N+K+ + +E+ + KK NI EL
Sbjct: 207 LKIRANELD-------VLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKKTIENINELIEES 259
Query: 187 QKLEKYNKKLADAEKVRDHYTA---LEIKHEILPHIHKKISELES-IKAVVTSKDIAEII 20
+K NK E+ + Y A L I ++ L H IS LE I + +++I E++
Sbjct: 260 KKTIDKNKNATKEEEKKKLYQAQYDLSIYNKQLEEAHNLISVLEKRIDTLKKNENIKELL 319
Query: 19 SRLTRI 2
++ I
Sbjct: 320 DKINEI 325
>gi|1345731|sp|P49454|CENF_HUMAN CENP-F KINETOCHORE PROTEIN >gi|924601 (U19769) CENP-F kinetochore
protein [Homo sapiens]
Length = 3210
Score = 36.4 bits (82), Expect = 0.29
Identities = 38/135 (28%), Positives = 69/135 (50%), Gaps = 12/135 (8%)
Query: 502 SSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYER 323
S ++ +S+++L IDL+ S+ +L+ +Q + LK+ + ++ + ER
Sbjct: 2830 SKEECLSSQKLE---IDLLKSSKEELNNSLKATTQILEELKKTKMDNLKYVNQLKKENER 2886
Query: 322 E--KTDILAARINDLKIHLENLKNELIPLEESYNEEKKNI----------TELKNLKQKL 179
K +L L+ E L+ EL L+ + ++K TE+K LK+ L
Sbjct: 2887 AQGKMKLLIKSCKQLEEEKEILQKELSQLQAAQEKQKTGTVMDTKVDELTTEIKELKETL 2946
Query: 178 EKYNKKLADAEKVRDHYTALEIKHEIL 98
E+ K +A++ D Y +L I HE L
Sbjct: 2947 EEKTK---EADEYLDKYCSLLISHEKL 2970
>gi|86358|pir||A29320 myosin heavy chain, embryonic - chicken
Length = 1940
Score = 36.4 bits (82), Expect = 0.29
Identities = 41/162 (25%), Positives = 81/162 (49%), Gaps = 8/162 (4%)
Query: 511 AVKSSKKYISNRRLPDIAIDLVDS--ACSSAIVNLENESQPVTMLKEQMWSVELEIKAIE 338
+++ +K+ + N + D+ ID+ S AC++ +N + ++ K++ + E++A +
Sbjct: 1418 SLEKTKQRLQNE-VEDLMIDVERSNAACAALDKKQKNFDKILSEWKQKYEETQAELEASQ 1476
Query: 337 IDYEREKTDILAAR--INDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNK 164
+ T++ + + HLE LK E L++ ++ + I E +LEK K
Sbjct: 1477 KESRSLSTELFKMKNAYEESLDHLETLKRENKNLQQEISDLTEQIAEGGKAIHELEKVKK 1536
Query: 163 KLADAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSKDIAE 26
++ ++ + TALE L H KI EL +K+ + K IAE
Sbjct: 1537 QI--EQEKSELQTALEEAEASLEHEEGKILRVQLELNQVKSDIDRK-IAE 1583
Score = 34.4 bits (77), Expect = 1.1
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E KA++ +++
Sbjct: 956 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MAALDETIAKLTKEKKALQEAHQQTL 1012
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEK 143
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE D +
Sbjct: 1013 DDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLE------GDLKM 1066
Query: 142 VRDHYTALE-IKHEILPHIHKKISELESIKAVV 47
++ LE K ++ + KK E+ I++ +
Sbjct: 1067 TQESTMDLENDKQQLDEKLKKKDFEISQIQSKI 1099
>gi|1346637|sp|P02565|MYSE_CHICK MYOSIN HEAVY CHAIN, FAST SKELETAL MUSCLE, EMBRYONIC >gi|212376
(J02714) myosin heavy chain [Gallus gallus]
Length = 1940
Score = 36.4 bits (82), Expect = 0.29
Identities = 41/162 (25%), Positives = 81/162 (49%), Gaps = 8/162 (4%)
Query: 511 AVKSSKKYISNRRLPDIAIDLVDS--ACSSAIVNLENESQPVTMLKEQMWSVELEIKAIE 338
+++ +K+ + N + D+ ID+ S AC++ +N + ++ K++ + E++A +
Sbjct: 1418 SLEKTKQRLQNE-VEDLMIDVERSNAACAALDKKQKNFDKILSEWKQKYEETQAELEASQ 1476
Query: 337 IDYEREKTDILAAR--INDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNK 164
+ T++ + + HLE LK E L++ ++ + I E +LEK K
Sbjct: 1477 KESRSLSTELFKMKNAYEESLDHLETLKRENKNLQQEISDLTEQIAEGGKAIHELEKVKK 1536
Query: 163 KLADAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSKDIAE 26
++ ++ + TALE L H KI EL +K+ + K IAE
Sbjct: 1537 QI--EQEKSELQTALEEAEASLEHEEGKILRVQLELNQVKSDIDRK-IAE 1583
Score = 34.4 bits (77), Expect = 1.1
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E KA++ +++
Sbjct: 956 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MAALDETIAKLTKEKKALQEAHQQTL 1012
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEK 143
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE D +
Sbjct: 1013 DDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLE------GDLKM 1066
Query: 142 VRDHYTALE-IKHEILPHIHKKISELESIKAVV 47
++ LE K ++ + KK E+ I++ +
Sbjct: 1067 TQESTMDLENDKQQLDEKLKKKDFEISQIQSKI 1099
>gi|1085294|pir||PC4035 cell-cycle-dependent 350K nuclear protein - human (fragment)
>gi|818867 (U25725) AH antigen [Homo sapiens]
Length = 1017
Score = 36.4 bits (82), Expect = 0.29
Identities = 38/135 (28%), Positives = 69/135 (50%), Gaps = 12/135 (8%)
Query: 502 SSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYER 323
S ++ +S+++L IDL+ S+ +L+ +Q + LK+ + ++ + ER
Sbjct: 637 SKEECLSSQKLE---IDLLKSSKEELNNSLKATTQILEELKKTKMDNLKYVNQLKKENER 693
Query: 322 E--KTDILAARINDLKIHLENLKNELIPLEESYNEEKKNI----------TELKNLKQKL 179
K +L L+ E L+ EL L+ + ++K TE+K LK+ L
Sbjct: 694 AQGKMKLLIKSCKQLEEEKEILQKELSQLQAAQEKQKTGTVMDTKVDELTTEIKELKETL 753
Query: 178 EKYNKKLADAEKVRDHYTALEIKHEIL 98
E+ K +A++ D Y +L I HE L
Sbjct: 754 EEKTK---EADEYLDKYCSLLISHEKL 777
>gi|1208856 (U50068) C01G5.4 gene product [Caenorhabditis elegans]
Length = 1060
Score = 36.4 bits (82), Expect = 0.29
Identities = 42/122 (34%), Positives = 76/122 (61%), Gaps = 33/122 (27%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARI----NDLKI--HLENLKNE 254
L NE P+ + +++ + I+ +I Y+ +K ++ NDLK L+ L+++
Sbjct: 152 LMNEKIPIDAVVGELFGLR-SIELSDIFYKLDKIAAWTRKLKDIPNDLKASTELDELESK 210
Query: 253 LIPLEESYNE--------EKKNITE----LKNLKQKLEKYNKKL-ADA-----------E 146
++ L++ E E +T+ +KN+K LEKYN KL +DA E
Sbjct: 211 ILELDQIRMESDGVQNVLESSKLTDYFATVKNVKNNLEKYNFKLFSDANREISTVLITLE 270
Query: 145 KVRDHYTALEI--KHEILPHIHKK-ISELESIKAV 50
K+ TA E+ K+ LP KK ++ +E++K +
Sbjct: 271 KILSSATAKELWNKYRSLPSQCKKMMAAIEAVKKI 305
>gi|1346586|sp|P04932|MSP1_PLAFK MEROZOITE SURFACE PROTEIN 1 PRECURSOR (MEROZOITE SURFACE ANTIGENS)
(PMMSA) (P190) >gi|929798|emb|CAA27070| (X03371)
precursor for the major merozoite surface antigens
[Plasmodium falciparum]
Length = 1630
Score = 36.4 bits (82), Expect = 0.29
Identities = 34/119 (28%), Positives = 60/119 (49%), Gaps = 7/119 (5%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKK---NITELKNLK 188
L+I+A E+D +L + + L+N+K+ + +E+ + KK NI EL
Sbjct: 198 LKIRANELD-------VLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKKTIENINELIEES 250
Query: 187 QKLEKYNKKLADAEKVRDHYTA---LEIKHEILPHIHKKISELES-IKAVVTSKDIAEII 20
+K NK E+ + Y A L I ++ L H IS LE I + +++I E++
Sbjct: 251 KKTIDKNKNATKEEEKKKLYQAQYDLSIYNKQLEEAHNLISVLEKRIDTLKKNENIKELL 310
Query: 19 SRLTRI 2
++ I
Sbjct: 311 DKINEI 316
>gi|3821955 (AF061131) merozoite surface protein 1 [Plasmodium falciparum]
>gi|3821957 (AF061132) merozoite surface protein 1
[Plasmodium falciparum]
Length = 347
Score = 36.4 bits (82), Expect = 0.29
Identities = 34/119 (28%), Positives = 60/119 (49%), Gaps = 7/119 (5%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKK---NITELKNLK 188
L+I+A E+D +L + + L+N+K+ + +E+ + KK NI EL
Sbjct: 198 LKIRANELD-------VLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKKTIENINELIEES 250
Query: 187 QKLEKYNKKLADAEKVRDHYTA---LEIKHEILPHIHKKISELES-IKAVVTSKDIAEII 20
+K NK E+ + Y A L I ++ L H IS LE I + +++I E++
Sbjct: 251 KKTIDKNKNATKEEEKKKLYQAQYDLSIYNKQLEEAHNLISVLEKRIDTLKKNENIKELL 310
Query: 19 SRLTRI 2
++ I
Sbjct: 311 DKINEI 316
>gi|227523|prf||1705299A myosin H [Mus musculus]
Length = 1852
Score = 36.0 bits (81), Expect = 0.37
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 505 KSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI----KAIE 338
+S KK I R D + NL+ E+ T+LK++ ++ I K +
Sbjct: 1002 RSEKKSIEERA------DKYKQETDQLVSNLKEEN---TLLKQEKETLNHRIVEQAKEMT 1052
Query: 337 IDYER---EKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNL 191
ER E+T L +ND ++ +NL NE LEE Y++ K+ +T + N+
Sbjct: 1053 ETMERKLVEETKQLELDLNDERLRYQNLLNEFSRLEERYDDLKEEMTLMLNV 1104
>gi|3834619 (AF093264) homer-2b [Homo sapiens]
Length = 354
Score = 36.0 bits (81), Expect = 0.37
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 361 ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK 182
ELE + EI+ E+EK L RI +L+ L + EL L + + ++E + + +K
Sbjct: 231 ELEEQCSEINREKEKNTQLKRRIEELEAELREKETELKDLRKQSEIIPQLMSECEYVSEK 290
Query: 181 L---EKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSK 38
L E+ N+ L D KVR T +I+ H K+ EL+S V+ K
Sbjct: 291 LEAAERDNQNLED--KVRSLKT--DIEESKYRQRHLKV-ELKSFLEVLDGK 336
Score = 31.7 bits (70), Expect = 7.3
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 412 ENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLK-----IHLENLKNELI 248
E+ ++ T L+E SVE + I R++ D L +I++L+ I+ E KN +
Sbjct: 192 ESNARLTTALQESAASVEQWKRQFSIC--RDENDRLRNKIDELEEQCSEINREKEKNTQL 249
Query: 247 P--LEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALE 116
+EE E ++ TELK+L+++ E + +++ E V + A E
Sbjct: 250 KRRIEELEAELREKETELKDLRKQSEIIPQLMSECEYVSEKLEAAE 295
>gi|677198 (L03188) putative [Saccharomyces cerevisiae]
Length = 1015
Score = 36.0 bits (81), Expect = 0.37
Identities = 40/135 (29%), Positives = 68/135 (49%), Gaps = 6/135 (4%)
Query: 412 ENESQPVTMLKEQMWSV-----ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELI 248
E ESQ +++LKE++ + E K E+ RE+ + A +LK LE +L
Sbjct: 270 EYESQ-ISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELET---KLE 325
Query: 247 PLEESYNEEKKNITELKNLKQKLEK-YNKKLADAEKVRDHYTALEIKHEILPHIHKKISE 71
E++ E K+N LK K +LEK + +R + +LE +HE L KK E
Sbjct: 326 TSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEE 385
Query: 70 LESIKAVVTSKDIAEIISRLT 8
+ K +++I+++ +T
Sbjct: 386 QIANKERQYNEEISQLNDEIT 406
Score = 35.6 bits (80), Expect = 0.49
Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 28/172 (16%)
Query: 580 LRGLRERFEAHHGVKISD-DALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENE 404
++ ++ E +K S+ DAL +K KK +++ +I ++E+E
Sbjct: 426 VKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETN----------EASLLESIKSIESE 475
Query: 403 SQPVTMLKEQMWSVELEI---------------KAIEIDYEREKT-DILAARINDLKIHL 272
+ + L+++ E E+ K +E+ E EK + L A+ +LKI L
Sbjct: 476 TVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQL 535
Query: 271 ENLKN----------ELIPLEESYNEEKKNITE-LKNLKQKLEKYNKKLADAEKVRDHYT 125
E + N EL L+++ +EE+KN E L+ LK +++ N+ K+ +
Sbjct: 536 EKVTNLSKAKEKSESELSRLKKTSSEERKNAEEQLEKLKNEIQIKNQAFEKERKLLN--- 592
Query: 124 ALEIKHEILPHIHKKISELE 65
E I +KI+ LE
Sbjct: 593 --EGSSTITQEYSEKINTLE 610
>gi|2688764 (AE001180) B. burgdorferi predicted coding region BB0826 [Borrelia
burgdorferi]
Length = 171
Score = 36.0 bits (81), Expect = 0.37
Identities = 27/102 (26%), Positives = 51/102 (49%)
Query: 343 IEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNK 164
++I +E D L +IN KI + +KNE+I L+ NE+ N E+K + N+
Sbjct: 71 LKIKKYKEANDFLK-KINQKKIKNQKIKNEIISLKLRINEDNINEEEIKKILN-----NE 124
Query: 163 KLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSK 38
K D + + ++ ++ K++ L + K I K++ + K
Sbjct: 125 KNIDVKIIYQIFSLIKFKNKKLANKIKNIILTNYPKSIYSYK 166
>gi|320776|pir||S30782 integrin homolog - yeast (Saccharomyces cerevisiae)
Length = 1726
Score = 36.0 bits (81), Expect = 0.37
Identities = 40/135 (29%), Positives = 68/135 (49%), Gaps = 6/135 (4%)
Query: 412 ENESQPVTMLKEQMWSV-----ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELI 248
E ESQ +++LKE++ + E K E+ RE+ + A +LK LE +L
Sbjct: 981 EYESQ-ISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELET---KLE 1036
Query: 247 PLEESYNEEKKNITELKNLKQKLEK-YNKKLADAEKVRDHYTALEIKHEILPHIHKKISE 71
E++ E K+N LK K +LEK + +R + +LE +HE L KK E
Sbjct: 1037 TSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEE 1096
Query: 70 LESIKAVVTSKDIAEIISRLT 8
+ K +++I+++ +T
Sbjct: 1097 QIANKERQYNEEISQLNDEIT 1117
Score = 35.6 bits (80), Expect = 0.49
Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 28/172 (16%)
Query: 580 LRGLRERFEAHHGVKISD-DALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENE 404
++ ++ E +K S+ DAL +K KK +++ +I ++E+E
Sbjct: 1137 VKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETN----------EASLLESIKSIESE 1186
Query: 403 SQPVTMLKEQMWSVELEI---------------KAIEIDYEREKT-DILAARINDLKIHL 272
+ + L+++ E E+ K +E+ E EK + L A+ +LKI L
Sbjct: 1187 TVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQL 1246
Query: 271 ENLKN----------ELIPLEESYNEEKKNITE-LKNLKQKLEKYNKKLADAEKVRDHYT 125
E + N EL L+++ +EE+KN E L+ LK +++ N+ K+ +
Sbjct: 1247 EKVTNLSKAKEKSESELSRLKKTSSEERKNAEEQLEKLKNEIQIKNQAFEKERKLLN--- 1303
Query: 124 ALEIKHEILPHIHKKISELE 65
E I +KI+ LE
Sbjct: 1304 --EGSSTITQEYSEKINTLE 1321
>gi|3834617 (AF093263) homer-2a [Homo sapiens]
Length = 343
Score = 36.0 bits (81), Expect = 0.37
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 361 ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK 182
ELE + EI+ E+EK L RI +L+ L + EL L + + ++E + + +K
Sbjct: 220 ELEEQCSEINREKEKNTQLKRRIEELEAELREKETELKDLRKQSEIIPQLMSECEYVSEK 279
Query: 181 L---EKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSK 38
L E+ N+ L D KVR T +I+ H K+ EL+S V+ K
Sbjct: 280 LEAAERDNQNLED--KVRSLKT--DIEESKYRQRHLKV-ELKSFLEVLDGK 325
Score = 31.7 bits (70), Expect = 7.3
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 412 ENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLK-----IHLENLKNELI 248
E+ ++ T L+E SVE + I R++ D L +I++L+ I+ E KN +
Sbjct: 181 ESNARLTTALQESAASVEQWKRQFSIC--RDENDRLRNKIDELEEQCSEINREKEKNTQL 238
Query: 247 P--LEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALE 116
+EE E ++ TELK+L+++ E + +++ E V + A E
Sbjct: 239 KRRIEELEAELREKETELKDLRKQSEIIPQLMSECEYVSEKLEAAE 284
>gi|4249644 (AF081530) neuralized binding protein [Homo sapiens]
Length = 343
Score = 36.0 bits (81), Expect = 0.37
Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 361 ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK 182
ELE + EI+ E+EK L RI +L+ L + EL L + + ++E + + +K
Sbjct: 220 ELEEQCSEINREKEKNTQLKRRIEELEAELREKETELKDLRKQSEIIPQLMSECEYVSEK 279
Query: 181 L---EKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSK 38
L E+ N+ L D KVR T +I+ H K+ EL+S V+ K
Sbjct: 280 LEAAERDNQNLED--KVRSLKT--DIEESKYRQRHLKV-ELKSFLEVLDGK 325
Score = 31.7 bits (70), Expect = 7.3
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 412 ENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLK-----IHLENLKNELI 248
E+ ++ T L+E SVE + I R++ D L +I++L+ I+ E KN +
Sbjct: 181 ESNARLTTALQESAASVEQWKRQFSIC--RDENDRLRNKIDELEEQCSEINREKEKNTQL 238
Query: 247 P--LEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALE 116
+EE E ++ TELK+L+++ E + +++ E V + A E
Sbjct: 239 KRRIEELEAELREKETELKDLRKQSEIIPQLMSECEYVSEKLEAAE 284
>gi|547972|sp|P13392|MYSP_DIRIM PARAMYOSIN >gi|345381|pir||A44972 paramyosin - nematode
(Dirofilaria immitis) (fragment) >gi|537506 (M29733)
paramyosin [Dirofilaria immitis]
Length = 848
Score = 36.0 bits (81), Expect = 0.37
Identities = 28/112 (25%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 400 QPVTMLKEQMWSVELEIKAIEIDYEREKTDI---------LAARINDLKIHLENLKNELI 248
Q ++ L++ ++ E++ + +D E+ + I L +N+LK+ ++ L +
Sbjct: 314 QKISQLEKAKSRLQSEVEVLIVDLEKAQNTIAILERAKEQLEKTVNELKVRIDEL---TV 370
Query: 247 PLEESYNEEKKNITELKNLKQKLEK-YNKKLADAEKVRDHYTALEIKHEILPHIHKKISE 71
LE + E + + EL+ +K EK +K A A + + L E L ++K+ E
Sbjct: 371 ELEAAQREARAALAELQKMKNLYEKAIEQKEALARENKKLQDDLHEAKEALADANRKLHE 430
Query: 70 LE 65
L+
Sbjct: 431 LD 432
>gi|547774|sp|P35978|KINH_STRPU KINESIN HEAVY CHAIN >gi|85370|pir||A38713 kinesin heavy chain - sea
urchin (Strongylocentrotus purpuratus)
>gi|10270|emb|CAA40175| (X56844) /kinesin heavy chain
[Strongylocentrotus purpuratus]
Length = 1031
Score = 36.0 bits (81), Expect = 0.37
Identities = 36/131 (27%), Positives = 69/131 (52%), Gaps = 10/131 (7%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIH----LENLKNELI 248
++N+S+ LK+QM E + +++ DYE +L +++ L+ E K L
Sbjct: 426 IDNQSRLTEKLKQQMLEQEELLSSMQRDYE-----LLQSQMGRLEAENAAAKEEAKEVLQ 480
Query: 247 PLEE---SYNEEKKNITELKNLKQKL-EKYNKKLADAEKVRDHYTALEIK--HEILPHIH 86
LEE +Y+E+ K + + + + L E+ N+K+ H T+ E++ E+ H
Sbjct: 481 ALEEMAVNYDEKSKEVEDKNRMNETLSEEVNEKMTAL-----HTTSTELQKLQELEQHQR 535
Query: 85 KKISELESIKAVVTSKDIAEI 23
++I+E+ KD+ EI
Sbjct: 536 RRITEM----MASLLKDLGEI 552
Score = 32.1 bits (71), Expect = 5.6
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKY 170
K E D + T++ A+ ++ H + + +L L NE++ + ELK++ Q++
Sbjct: 679 KREEEDKMQSATEMQASMSEQMESHRDAHQKQLANLRTEINEKEHQMEELKDVNQRMTLQ 738
Query: 169 NKKL-ADAEKVR 137
++KL D EK++
Sbjct: 739 HEKLQLDYEKLK 750
>gi|1717746|sp|P50754|TRIC_XENLA TROPONIN I, CARDIAC MUSCLE (TROPONIN IC) >gi|2119384|pir||I51408
cardiac troponin I - African clawed frog >gi|410051
(L25721) cardiac troponin I [Xenopus laevis]
Length = 244
Score = 36.0 bits (81), Expect = 0.37
Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 26/120 (21%)
Query: 382 KEQMWSVELEIKAIEIDYE-----REKTDILAARINDLKI------HLENLKNEL----- 251
K Q+ ++ L+I E++ E REK LA L++ L++L EL
Sbjct: 71 KLQLNTMMLQIAKAEMEREEEERAREKERYLAEHCQPLQLSGLSRSELQDLCQELHARID 130
Query: 250 IPLEESYNEE---KKNITELKNLKQKLEKYNKKLADAEKVRDHYTA-------LEIKHEI 101
+ EE Y+ E KNITEL++L QK+ K R +A L KH++
Sbjct: 131 VVDEERYDMEAKVNKNITELEDLNQKIFDLRGKFKKPNLRRVRLSADAMMMALLGTKHKV 190
Query: 100 LPHIHKKISELESIKAVVTSKDIAEI 23
+ + +++ K KDI E+
Sbjct: 191 SMDLRANLKQVKQTKKDDADKDIREV 216
>gi|1197168|dbj|BAA08111| (D45163) embryonic muscle myosin heavy chain [Halocynthia roretzi]
Length = 1927
Score = 36.0 bits (81), Expect = 0.37
Identities = 39/145 (26%), Positives = 73/145 (49%), Gaps = 21/145 (14%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + + ++ A + + NL+ E + EQ+ ++ E KA++ +++
Sbjct: 951 KKDIDDLEITLAKVEKEKHATENKLKNLQEE---LASQDEQIAKLQKEKKALQEAHQQTL 1007
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE----------- 176
D+ + + N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 1008 DDLQSEEDKANSLTKQKAKLEQQVDDLEASLEQEKKLRMDLERTKRKLEGDLRLTQETVM 1067
Query: 175 -KYNKKLADAEKVRDH-------YTALEIKHEILPHIHKKISELES 62
N K EK++ T LE + ++ + KKI EL++
Sbjct: 1068 DLENDKQRLEEKLKKQEFEYSQLATKLEDEQALVMQLQKKIKELQA 1113
>gi|730979|sp|P41114|TPM1_PODCA TROPOMYOSIN >gi|479659|pir||S35060 tropomyosin - hydromedusa
(Podocoryne carnea) >gi|397472|emb|CAA50550| (X71418)
Tropomyosin [Podocoryne carnea] >gi|449434|prf||1919263A
tropomyosin [Podocoryne carnea]
Length = 242
Score = 36.0 bits (81), Expect = 0.37
Identities = 34/106 (32%), Positives = 53/106 (49%), Gaps = 2/106 (1%)
Query: 379 EQMWSVELEIKA-IEIDYEREKT-DILAARINDLKIHLENLKNELIPLEESYNEEKKNIT 206
+Q E E+ A +E E E+T D L + DL+ L+ ++ L L E YNEE+K
Sbjct: 20 KQAQDAEDELTATLEKAAETEQTADELQKTLADLEDELDAAESRLTSLTEKYNEEEKKAE 79
Query: 205 ELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES 62
E + ++LE N+ D ++ T L E + +K+SEL S
Sbjct: 80 EGRRAHKELE--NRGQTDYSRLNRLETELAEITEQNEVVVEKLSELSS 125
>gi|516826|dbj|BAA05026| (D25543) rat GCP360 [Rattus rattus]
Length = 3187
Score = 36.0 bits (81), Expect = 0.37
Identities = 32/131 (24%), Positives = 67/131 (50%), Gaps = 2/131 (1%)
Query: 427 AIVNLENESQPVTMLKEQMWSVELEIKAI--EIDYEREKTDILAARINDLKIHLENLKNE 254
++ ++++ + + + KE++ EL+I + E+ + E+ +L +IN+ + ++NLK
Sbjct: 1240 SVAQIQDQLKEIEVEKEEL---ELKISSTTSELTKKSEEVLLLQEQINEQGLEIQNLK-- 1294
Query: 253 LIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKIS 74
+ + E K TE LKQ+LE K+AD E ++ LE + H+ +K
Sbjct: 1295 ------AASHEAKAHTE--QLKQELESSQLKIADLEHLKTLQPELE---TLQKHVGQKEE 1343
Query: 73 ELESIKAVVTSKD 35
E+ + + K+
Sbjct: 1344 EVSYLVGQLGEKE 1356
>gi|3093478 (AF012927) fibrinogen-binding protein [Streptococcus equi]
Length = 534
Score = 36.0 bits (81), Expect = 0.37
Identities = 39/119 (32%), Positives = 60/119 (49%), Gaps = 14/119 (11%)
Query: 364 VELEIKAIEIDYE--REKTDILAARINDLKIHLENLKNELIPLEESYN--------EEKK 215
+E ++ AI+ E RE+ L + + L+ K+E L ES+N E K
Sbjct: 148 LEAKLAAIKSQQEMLRERDSQLRNLEKEKEQELQKAKDERQALTESFNKTLSRSTKEYNK 207
Query: 214 NITELKNLKQKLEKYNKKLAD----AEKVRDHYTALEIKHEILPHIHKKISELESIKAVV 47
TEL K+K K K+LAD AE RD A + ++ + +E KA
Sbjct: 208 LKTELAKEKEKAAKMTKELADKLSNAEASRD--KAFAVSKDLADKLSS--AEASRDKAFA 263
Query: 46 TSKDIAEIISRLT 8
SKD+A+ ++ T
Sbjct: 264 VSKDLADKLAAKT 276
Score = 31.7 bits (70), Expect = 7.3
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 406 ESQP-VTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKI-------HLENLKNEL 251
ESQ V L++Q + + ++ +E + E K A + DLK+ LE +K E
Sbjct: 372 ESQANVAELEKQKAASDAKVAELEKEVEAAK-----AEVADLKVQLAKKEEELEAVKKEK 426
Query: 250 IPLEESYNEEKK-NITELKNLKQKLEKYNKKLADAE 146
LE E KK + EL LK+ LEK + AD +
Sbjct: 427 EALEAKIEELKKAHAEELSKLKEMLEKKDHANADLQ 462
>gi|1903280|emb|CAA98620| (Z74105) ORF YDL058w [Saccharomyces cerevisiae]
Length = 1268
Score = 36.0 bits (81), Expect = 0.37
Identities = 40/135 (29%), Positives = 68/135 (49%), Gaps = 6/135 (4%)
Query: 412 ENESQPVTMLKEQMWSV-----ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELI 248
E ESQ +++LKE++ + E K E+ RE+ + A +LK LE +L
Sbjct: 529 EYESQ-ISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELET---KLE 584
Query: 247 PLEESYNEEKKNITELKNLKQKLEK-YNKKLADAEKVRDHYTALEIKHEILPHIHKKISE 71
E++ E K+N LK K +LEK + +R + +LE +HE L KK E
Sbjct: 585 TSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEE 644
Query: 70 LESIKAVVTSKDIAEIISRLT 8
+ K +++I+++ +T
Sbjct: 645 QIANKERQYNEEISQLNDEIT 665
Score = 36.0 bits (81), Expect = 0.37
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 20/172 (11%)
Query: 580 LRGLRERFEAHHGVKISD-DALVFAVKSSKKYISNRRLPDIAIDLVDSACSSA--IVNLE 410
++ ++ E +K S+ DAL +K KK N ++ + S S I L+
Sbjct: 685 VKAMKSTSEEQSNLKKSEIDALNLQIKELKK--KNETNEASLLESIKSVESETVKIKELQ 742
Query: 409 NE----SQPVTMLKEQMWSVE-LEIKAIEIDYEREKT-DILAARINDLKIHLENLKN--- 257
+E + V+ L++++ + E K +E+ E EK + L A+ +LKI LE + N
Sbjct: 743 DECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSK 802
Query: 256 -------ELIPLEESYNEEKKNITE-LKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEI 101
EL L+++ +EE+KN E L+ LK +++ N+ K+ + E I
Sbjct: 803 AKEKSESELSRLKKTSSEERKNAEEQLEKLKNEIQIKNQAFEKERKLLN-----EGSSTI 857
Query: 100 LPHIHKKISELE 65
+KI+ LE
Sbjct: 858 TQEYSEKINTLE 869
>gi|3821959 (AF061133) merozoite surface protein 1 [Plasmodium falciparum]
Length = 353
Score = 36.0 bits (81), Expect = 0.37
Identities = 34/119 (28%), Positives = 60/119 (49%), Gaps = 7/119 (5%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKK---NITELKNLK 188
L+I+A E+D +L + + L+N+K+ + +E+ + KK NI EL
Sbjct: 204 LKIRANELD-------VLKKIVFGYRKPLDNIKDNVGKMEDYIKKNKKTIENINELIEES 256
Query: 187 QKLEKYNKKLADAEKVRDHYTA---LEIKHEILPHIHKKISELES-IKAVVTSKDIAEII 20
+K NK E+ + Y A L I ++ L H IS LE I + +++I E++
Sbjct: 257 KKTIDKNKNATKEEEKKKLYQAQYDLSIYNKQLEEAHNLISVLEKRIDTLKKNENIKELL 316
Query: 19 SRLTRI 2
++ I
Sbjct: 317 DKINEI 322
>gi|137175|sp|P25386|USO1_YEAST INTRACELLULAR PROTEIN TRANSPORT PROTEIN USO1 >gi|4778|emb|CAA38253|
(X54378) Uso1 protein [Saccharomyces cerevisiae]
Length = 1790
Score = 36.0 bits (81), Expect = 0.37
Identities = 40/135 (29%), Positives = 68/135 (49%), Gaps = 6/135 (4%)
Query: 412 ENESQPVTMLKEQMWSV-----ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELI 248
E ESQ +++LKE++ + E K E+ RE+ + A +LK LE +L
Sbjct: 1051 EYESQ-ISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELET---KLE 1106
Query: 247 PLEESYNEEKKNITELKNLKQKLEK-YNKKLADAEKVRDHYTALEIKHEILPHIHKKISE 71
E++ E K+N LK K +LEK + +R + +LE +HE L KK E
Sbjct: 1107 TSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEE 1166
Query: 70 LESIKAVVTSKDIAEIISRLT 8
+ K +++I+++ +T
Sbjct: 1167 QIANKERQYNEEISQLNDEIT 1187
Score = 36.0 bits (81), Expect = 0.37
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 20/172 (11%)
Query: 580 LRGLRERFEAHHGVKISD-DALVFAVKSSKKYISNRRLPDIAIDLVDSACSSA--IVNLE 410
++ ++ E +K S+ DAL +K KK N ++ + S S I L+
Sbjct: 1207 VKAMKSTSEEQSNLKKSEIDALNLQIKELKK--KNETNEASLLESIKSVESETVKIKELQ 1264
Query: 409 NE----SQPVTMLKEQMWSVE-LEIKAIEIDYEREKT-DILAARINDLKIHLENLKN--- 257
+E + V+ L++++ + E K +E+ E EK + L A+ +LKI LE + N
Sbjct: 1265 DECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSK 1324
Query: 256 -------ELIPLEESYNEEKKNITE-LKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEI 101
EL L+++ +EE+KN E L+ LK +++ N+ K+ + E I
Sbjct: 1325 AKEKSESELSRLKKTSSEERKNAEEQLEKLKNEIQIKNQAFEKERKLLN-----EGSSTI 1379
Query: 100 LPHIHKKISELE 65
+KI+ LE
Sbjct: 1380 TQEYSEKINTLE 1391
>gi|547968|sp|Q99104|MY5A_MOUSE DILUTE MYOSIN HEAVY CHAIN, NON-MUSCLE (MYOSIN 5A)
>gi|476354|pir||A46761 myosin heavy chain, dilute - mouse
>gi|50715|emb|CAA40651| (X57377) myosin heavy chain [Mus
musculus]
Length = 1853
Score = 36.0 bits (81), Expect = 0.37
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 505 KSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEI----KAIE 338
+S KK I R D + NL+ E+ T+LK++ ++ I K +
Sbjct: 1003 RSEKKSIEERA------DKYKQETDQLVSNLKEEN---TLLKQEKETLNHRIVEQAKEMT 1053
Query: 337 IDYER---EKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNL 191
ER E+T L +ND ++ +NL NE LEE Y++ K+ +T + N+
Sbjct: 1054 ETMERKLVEETKQLELDLNDERLRYQNLLNEFSRLEERYDDLKEEMTLMLNV 1105
>gi|2133190|pir||S67593 transport protein USO1 - yeast (Saccharomyces cerevisiae)
>gi|1431059|emb|CAA98621| (Z74106) ORF YDL058w
[Saccharomyces cerevisiae]
Length = 1790
Score = 36.0 bits (81), Expect = 0.37
Identities = 40/135 (29%), Positives = 68/135 (49%), Gaps = 6/135 (4%)
Query: 412 ENESQPVTMLKEQMWSV-----ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELI 248
E ESQ +++LKE++ + E K E+ RE+ + A +LK LE +L
Sbjct: 1051 EYESQ-ISLLKEKLETATTANDENVNKISELTKTREELEAELAAYKNLKNELET---KLE 1106
Query: 247 PLEESYNEEKKNITELKNLKQKLEK-YNKKLADAEKVRDHYTALEIKHEILPHIHKKISE 71
E++ E K+N LK K +LEK + +R + +LE +HE L KK E
Sbjct: 1107 TSEKALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEE 1166
Query: 70 LESIKAVVTSKDIAEIISRLT 8
+ K +++I+++ +T
Sbjct: 1167 QIANKERQYNEEISQLNDEIT 1187
Score = 36.0 bits (81), Expect = 0.37
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 20/172 (11%)
Query: 580 LRGLRERFEAHHGVKISD-DALVFAVKSSKKYISNRRLPDIAIDLVDSACSSA--IVNLE 410
++ ++ E +K S+ DAL +K KK N ++ + S S I L+
Sbjct: 1207 VKAMKSTSEEQSNLKKSEIDALNLQIKELKK--KNETNEASLLESIKSVESETVKIKELQ 1264
Query: 409 NE----SQPVTMLKEQMWSVE-LEIKAIEIDYEREKT-DILAARINDLKIHLENLKN--- 257
+E + V+ L++++ + E K +E+ E EK + L A+ +LKI LE + N
Sbjct: 1265 DECNFKEKEVSELEDKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSK 1324
Query: 256 -------ELIPLEESYNEEKKNITE-LKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEI 101
EL L+++ +EE+KN E L+ LK +++ N+ K+ + E I
Sbjct: 1325 AKEKSESELSRLKKTSSEERKNAEEQLEKLKNEIQIKNQAFEKERKLLN-----EGSSTI 1379
Query: 100 LPHIHKKISELE 65
+KI+ LE
Sbjct: 1380 TQEYSEKINTLE 1391
>gi|423123|pir||S33124 tpr protein - human
Length = 2094
Score = 35.6 bits (80), Expect = 0.49
Identities = 35/126 (27%), Positives = 66/126 (51%), Gaps = 13/126 (10%)
Query: 418 NLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNEL---I 248
NLEN+ + V+ L+EQM ++ + ++ E T + A+ + E NEL I
Sbjct: 225 NLENKKEEVSRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASME-EKFHNELNAHI 283
Query: 247 PLEESY----NEEKKNITELKNLKQKLEKYNKKLADAEK-VRDHYTALE-----IKHEIL 98
L Y ++ + EL ++L K K+ +A K ++DH +E ++ E+L
Sbjct: 284 KLSNLYKSAADDSEAKSNELTRAVEELHKLLKEAGEANKAIQDHLLEVEQSKDQMEKEML 343
Query: 97 PHIHKKISELESIKAVVTS 41
I + ELE+ ++++
Sbjct: 344 EKIGRLEKELENANDLLSA 362
Score = 33.6 bits (75), Expect = 1.9
Identities = 36/118 (30%), Positives = 70/118 (58%), Gaps = 34/118 (28%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDY-------EREKTDILAAR-------INDLKI 278
L+N + + LK+ + ++E+++ + +E D L ++ +NDLK
Sbjct: 894 LKNAQKEIATLKQHLSNMEVQVASQSSQRTGKGQPSNKEDVDDLVSQLRQTEEQVNDLKE 953
Query: 277 HL-------ENLKNELIPLEESYNEEKKNITEL-KNLKQKLE-------KYNKKLADAEK 143
L E + + LEES N+EK+ E+ KN++ +L+ + KKL + EK
Sbjct: 954 RLKTSTSNVEQYQAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEKKLMEVEK 1013
Query: 142 VR-----DHYTALEIKHEILPHIHKKISELES 62
+ D A+E + L + K +S +++
Sbjct: 1014 EKQELQDDKRRAIESMEQQLSELKKTLSSVQN 1045
Score = 32.5 bits (72), Expect = 4.2
Identities = 30/86 (34%), Positives = 46/86 (52%), Gaps = 7/86 (8%)
Query: 325 REKTDILAA-------RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYN 167
+ KTD L A I +LK +LEN K E+ LEE N K T ++L++ +E
Sbjct: 202 KTKTDELLALGREKGNEILELKCNLENKKEEVSRLEEQMNGLK---TSNEHLQKHVEDLL 258
Query: 166 KKLADAEKVRDHYTALEIKHEILPHIHKKISEL 68
KL +A ++ ++E K + H K+S L
Sbjct: 259 TKLKEA---KEQQASMEEKFHNELNAHIKLSNL 288
>gi|3877858|emb|CAA84332| (Z34801) Similarity with drosohila MSP-300 protein (PIR acc. no.
S30431) [Caenorhabditis elegans]
>gi|3878093|emb|CAA91344| (Z66514) Similarity with
drosohila MSP-300 protein (PIR acc. no. S30431)
[Caenorhabditis elegans]
Length = 1133
Score = 35.6 bits (80), Expect = 0.49
Identities = 38/140 (27%), Positives = 75/140 (53%), Gaps = 21/140 (15%)
Query: 448 VDSACSSAIVNLENESQPVTMLKEQMWSV-ELEIKAIEIDYEREKTDILAAR--INDLKI 278
V+ A + I LE + Q + K Q S E +++ + E+ + + +A I+DL+
Sbjct: 688 VEQALRAEIEKLEAKLQEIEKAKMQNSSKREQKVRELSNLNEKMRVEFIAKEKIISDLRS 747
Query: 277 HLENLKNELIPLEESYNEEKKNITELKNLK---------QKLEKYNKKLADAEKVRDHYT 125
L + EL+ + + + K + EL+ + +K+E+ + A+++ +
Sbjct: 748 ELSTISTELVVQKATVEKTKMDFGELETREKRATADRENEKMEEIRLRETFAKELETMGS 807
Query: 124 ALEIK----HEILPHIHKKISEL-----ESIKAVVTSKDIA 29
ALE+K +E+ KKI++L E +K S+D A
Sbjct: 808 ALEVKETAYNELKASAEKKIAKLTSQFEEKLKKAQNSQDEA 848
Score = 31.7 bits (70), Expect = 7.3
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 19/112 (16%)
Query: 340 EIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKK 161
E++ +K D + + +E +K +LI N EK+ ++ LKQKLE+ K
Sbjct: 173 ELEAVSKKLDSSETSLKEFSDMIEAMKIQLI------NCEKQKDEAVELLKQKLEEVEKN 226
Query: 160 LADAE------------KVRDHYTALEIKHEILPHIHKKISELE-------SIKAVVTSK 38
++D E +++ H A EI + L I L+ ++K + S
Sbjct: 227 MSDVEVQKQLLLESTTSEMKQHAEAAEIVKKQLEEAQSSIENLKKDAENERNLKTALES- 285
Query: 37 DIAEIISRLTR 5
D + IS +T+
Sbjct: 286 DESSAISEITK 296
>gi|2983047 (AE000686) hypothetical protein [Aquifex aeolicus]
Length = 850
Score = 35.6 bits (80), Expect = 0.49
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 253 LIPLEE--SYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKK 80
L+PL S+ K I +K+ + LE ++ + E ++ +++ +E L H+++
Sbjct: 185 LLPLNGLLSFWASKHIIEVVKSFAKNLENNINRIRNLEDLKKISREMDVPYEELKHLYQS 244
Query: 79 ISEL-ESIKAVVTSKDIAEIISRL 11
+ +L E ++ + KDI E+ SRL
Sbjct: 245 LYKLSEKVRQIAIDKDILELESRL 268
>gi|37258|emb|CAA44819| (X63105) Tpr [Homo sapiens]
Length = 726
Score = 35.6 bits (80), Expect = 0.49
Identities = 35/126 (27%), Positives = 66/126 (51%), Gaps = 13/126 (10%)
Query: 418 NLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNEL---I 248
NLEN+ + V+ L+EQM ++ + ++ E T + A+ + E NEL I
Sbjct: 225 NLENKKEEVSRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASME-EKFHNELNAHI 283
Query: 247 PLEESY----NEEKKNITELKNLKQKLEKYNKKLADAEK-VRDHYTALE-----IKHEIL 98
L Y ++ + EL ++L K K+ +A K ++DH +E ++ E+L
Sbjct: 284 KLSNLYKSAADDSEAKSNELTRAVEELHKLLKEAGEANKAIQDHLLEVEQSKDQMEKEML 343
Query: 97 PHIHKKISELESIKAVVTS 41
I + ELE+ ++++
Sbjct: 344 EKIGRLEKELENANDLLSA 362
Score = 32.5 bits (72), Expect = 4.2
Identities = 30/86 (34%), Positives = 46/86 (52%), Gaps = 7/86 (8%)
Query: 325 REKTDILAA-------RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYN 167
+ KTD L A I +LK +LEN K E+ LEE N K T ++L++ +E
Sbjct: 202 KTKTDELLALGREKGNEILELKCNLENKKEEVSRLEEQMNGLK---TSNEHLQKHVEDLL 258
Query: 166 KKLADAEKVRDHYTALEIKHEILPHIHKKISEL 68
KL +A ++ ++E K + H K+S L
Sbjct: 259 TKLKEA---KEQQASMEEKFHNELNAHIKLSNL 288
>gi|140032|sp|P20203|Y31K_SSV1 HYPOTHETICAL 31.5 KD PROTEIN (ORF B-277) >gi|76726|pir||S03240
hypothetical protein B-277 - Sulfolobus particle SSV1
>gi|46733|emb|CAA30207| (X07234) ORF B-277 [Sulfolobus
virus 1]
Length = 277
Score = 35.6 bits (80), Expect = 0.49
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 244 LEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKH-EILPHIHKKI-SE 71
L ++ EE + L+ LKQK E+ K++AD + ++ Y E + E++ +++I +E
Sbjct: 6 LLSAFEEELRKAQSLEELKQKYEEAQKQIADGKVLKRLYKVYEKRQTELMLQQYRQIKAE 65
Query: 70 LESIKAVVTSKDIAEIISRLTR 5
LE K V KD A+I R+ +
Sbjct: 66 LEKRKK-VKKKDKADIRVRVVK 86
>gi|4507659|oth|NP_003283|PTPR translocated promoter region (to activated MET oncogene)
>gi|1730009|sp|P12270|TPR_HUMAN NUCLEOPROTEIN TPR
>gi|633226|emb|CAA47021| (X66397) Tpr [Homo sapiens]
Length = 2349
Score = 35.6 bits (80), Expect = 0.49
Identities = 35/126 (27%), Positives = 66/126 (51%), Gaps = 13/126 (10%)
Query: 418 NLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNEL---I 248
NLEN+ + V+ L+EQM ++ + ++ E T + A+ + E NEL I
Sbjct: 225 NLENKKEEVSRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASME-EKFHNELNAHI 283
Query: 247 PLEESY----NEEKKNITELKNLKQKLEKYNKKLADAEK-VRDHYTALE-----IKHEIL 98
L Y ++ + EL ++L K K+ +A K ++DH +E ++ E+L
Sbjct: 284 KLSNLYKSAADDSEAKSNELTRAVEELHKLLKEAGEANKAIQDHLLEVEQSKDQMEKEML 343
Query: 97 PHIHKKISELESIKAVVTS 41
I + ELE+ ++++
Sbjct: 344 EKIGRLEKELENANDLLSA 362
Score = 33.6 bits (75), Expect = 1.9
Identities = 36/118 (30%), Positives = 70/118 (58%), Gaps = 34/118 (28%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDY-------EREKTDILAAR-------INDLKI 278
L+N + + LK+ + ++E+++ + +E D L ++ +NDLK
Sbjct: 894 LKNAQKEIATLKQHLSNMEVQVASQSSQRTGKGQPSNKEDVDDLVSQLRQTEEQVNDLKE 953
Query: 277 HL-------ENLKNELIPLEESYNEEKKNITEL-KNLKQKLE-------KYNKKLADAEK 143
L E + + LEES N+EK+ E+ KN++ +L+ + KKL + EK
Sbjct: 954 RLKTSTSNVEQYQAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEKKLMEVEK 1013
Query: 142 VR-----DHYTALEIKHEILPHIHKKISELES 62
+ D A+E + L + K +S +++
Sbjct: 1014 EKQELQDDKRRAIESMEQQLSELKKTLSSVQN 1045
Score = 32.5 bits (72), Expect = 4.2
Identities = 30/86 (34%), Positives = 46/86 (52%), Gaps = 7/86 (8%)
Query: 325 REKTDILAA-------RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYN 167
+ KTD L A I +LK +LEN K E+ LEE N K T ++L++ +E
Sbjct: 202 KTKTDELLALGREKGNEILELKCNLENKKEEVSRLEEQMNGLK---TSNEHLQKHVEDLL 258
Query: 166 KKLADAEKVRDHYTALEIKHEILPHIHKKISEL 68
KL +A ++ ++E K + H K+S L
Sbjct: 259 TKLKEA---KEQQASMEEKFHNELNAHIKLSNL 288
>gi|3886025 (AF106576) similar to the nucleolar protein NOF1/NOP2 family
[Caenorhabditis elegans]
Length = 645
Score = 35.6 bits (80), Expect = 0.49
Identities = 23/87 (26%), Positives = 45/87 (51%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKL 179
+E K+ +D ++EK I+A +L++++ N +P E E K++ L+ +KQ++
Sbjct: 106 IEKKSAALDKQKEK--IIAEGEEELQLNIANQATFELPTVEEIENEMKSVPNLEIVKQRI 163
Query: 178 EKYNKKLADAEKVRDHYTALEIKHEIL 98
+ L D + RD + E E+L
Sbjct: 164 ADVIQVLGDFKNRRDPQKSRENYVEVL 190
>gi|2274851|dbj|BAA21515| (D64159) 3-7 gene product [Homo sapiens]
Length = 709
Score = 35.6 bits (80), Expect = 0.49
Identities = 44/210 (20%), Positives = 99/210 (46%), Gaps = 8/210 (3%)
Query: 685 TFYEYRKYIENDQALARRFVKINVPEPTISDGITILRG--LRERFEAHHGVKISDDALVF 512
T E R +++ + A + +K+ +S + IL ++E+ + +S D +
Sbjct: 400 TVEELRTTVDSVEGNASKILKMEKENQRLSKKVEILENEIVQEKQSLQNCQNLSKDLMKE 459
Query: 511 AVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENE--SQPVTMLKEQMW-SVELEIKAI 341
+ K + R + I +++ ENE +Q V+ L+++ S E +K I
Sbjct: 460 KAQLEKTIETLRENSERQIKILEQ---------ENEHLNQTVSSLRQRSQISAEARVKDI 510
Query: 340 EIDYE--REKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYN 167
E + + E +++++ ++ +K EL +E ++ EL +L+++ E
Sbjct: 511 EKENKILHESIKETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEKENELLQ 570
Query: 166 KKLADAEKVRDHYTALEIKHEILPHIHKKISE-LESIK 56
KK+ + + + ALE ++ L ++K+ + L+S K
Sbjct: 571 KKITNLKITCEKIEALEQENSELERENRKLKKTLDSFK 608
>gi|2117300|emb|CAB09124| (Z95620) hypothetical protein [Schizosaccharomyces pombe]
Length = 689
Score = 35.6 bits (80), Expect = 0.49
Identities = 31/79 (39%), Positives = 52/79 (65%), Gaps = 20/79 (25%)
Query: 298 RINDLKIHLENLKNEL-----------IPLEESYNE--EKKNITEL------KNLKQKLE 176
++ L+ LENLKN+L I L+ E E+KN +L K L+++
Sbjct: 56 KLASLEFQLENLKNDLKRKELEFEREQIELQRKLAEEHEQKNSLQLRLTLVEKQLEEQST 115
Query: 175 KYNKKLADAEKVRDHYTALEIK-HEILPHIHKKISELES 62
Y K++ E+VR+ A ++K HE+L K+I+EL++
Sbjct: 116 SYQKEI---EEVRNEKEATQVKIHELLDAKWKEIAELKT 151
>gi|3024609|sp|Q15431|SCP1_HUMAN SYNAPTONEMAL COMPLEX PROTEIN 1 (SCP-1 PROTEIN)
>gi|1212983|emb|CAA64956| (X95654) polypeptide of 976 aa
[Homo sapiens]
Length = 976
Score = 35.6 bits (80), Expect = 0.49
Identities = 55/244 (22%), Positives = 105/244 (42%), Gaps = 26/244 (10%)
Query: 763 NEGSLDCTNMLKPSLASGKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGIT 584
N + N+LK + A K T YEY + + + N+ + + G
Sbjct: 176 NNATRHLCNLLKETCARSAEK----TKKYEYER---EETRQVYMDLNNNIEKMITAHGEL 228
Query: 583 ILRGLRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENE 404
++ R E H +K + + + KK I+++ +++ L+ I EN+
Sbjct: 229 RVQAENSRLEMHFKLKEDYEKIQHLEQEYKKEINDKE-KQVSLLLIQ------ITEKENK 281
Query: 403 SQPVTMLKEQ------MWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPL 242
+ +T L E+ + ++++ + EK L + D+K+ L+ + L
Sbjct: 282 MKDLTFLLEESRDKVNQLEEKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKAL 341
Query: 241 EESYNEEKKNITELKNLKQ-KLEKYNKKLAD---------------AEKVRDHYTALEIK 110
EE K I +L K+ ++E+ NK A E +R LE
Sbjct: 342 EEDLQIATKTICQLTEEKETQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEKN 401
Query: 109 HEILP----HIHKKISELESIKAVVTSKDI 32
+ L + KK SELE + + +K++
Sbjct: 402 EDQLKILTMELQKKSSELEEMTKLTNNKEV 431
>gi|487106|pir||S39083 myosin heavy chain, neonatal - chicken (fragment)
Length = 936
Score = 35.6 bits (80), Expect = 0.49
Identities = 39/152 (25%), Positives = 82/152 (53%), Gaps = 24/152 (15%)
Query: 511 AVKSSKKYISNRRLPDIAIDL--VDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIE 338
+++ +K+ + N + D+ ID+ +SAC++ +N + ++ K++ + E++A +
Sbjct: 414 SLEKTKQRLQNE-VEDLMIDVERANSACAALDKKQKNFDKILSEWKQKYEETQAELEASQ 472
Query: 337 IDYEREKTDILAAR--INDLKIHLENLK-------NELIPLEESYNEEKKNITELKNLKQ 185
+ T++ + + HLE LK E+ L E E K I EL+ +K+
Sbjct: 473 KESRSLSTELFKMKNAYEESLDHLETLKRENKNLQQEISDLTEQIAEGGKAIHELEKVKK 532
Query: 184 KLEKYNKK----LADAEKVRDHYTAL---------EIKHEILPHIHKKISELESIK 56
++E+ + L +AE +H ++K EI I +K E++ +K
Sbjct: 533 QIEQEKSELQASLEEAEASLEHEEGKILRLQLELNQVKSEIDRKIAEKDEEIDQLK 588
>gi|3005091|gb|AAC09301| (AF044926) hook protein [Drosophila virilis]
Length = 678
Score = 35.6 bits (80), Expect = 0.49
Identities = 25/74 (33%), Positives = 47/74 (62%), Gaps = 5/74 (6%)
Query: 388 MLKEQMWSVELEIKAIEIDYEREKTDIL--AARINDLK---IHLENLKNELIPLEESYNE 224
++KE++ E + ++I ++++TD+L RI++L L LK+E+ L ES ++
Sbjct: 258 LVKEELLQSEGAREDLKIKAQQQETDLLHMQQRIDELMKSTAELTALKDEVDVLRESTDK 317
Query: 223 EKKNITELKNLKQKLEKYN 167
K +L+ K+KLE+YN
Sbjct: 318 LKVCEAQLETYKKKLEEYN 336
Score = 33.2 bits (74), Expect = 2.5
Identities = 35/149 (23%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 478 RRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAA 299
R+L + +L+ S + + ++ + Q +L Q EL E+ +++ D+L
Sbjct: 254 RQLELVKEELLQSEGAREDLKIKAQQQETDLLHMQQRIDELMKSTAELTALKDEVDVLRE 313
Query: 298 RINDLKI---HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHY 128
+ LK+ LE K +L E YN+ KK++ K L+++ Y ++ A E+ Y
Sbjct: 314 STDKLKVCEAQLETYKKKL----EEYNDLKKHV---KMLEERSADYVQQNAQFEEDAKRY 366
Query: 127 TALEIKHEILPHIHKKISELESIKAVVTSKDI 32
+ + E+ K+I +L + +SK++
Sbjct: 367 ANTKGQVEL---FKKEIQDLHAQLDNESSKNV 395
>gi|3257095|dbj|BAA29778| (AP000003) 840aa long hypothetical cell division control protein
(transitional endoplasmic reticulum ATPase) [Pyrococcus
horikoshii]
Length = 840
Score = 35.6 bits (80), Expect = 0.49
Identities = 70/276 (25%), Positives = 124/276 (44%), Gaps = 24/276 (8%)
Query: 883 TQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLD------CTNMLKPS 722
++Y G+ EER + + K+ E + +I+F+DE + G ++ ++
Sbjct: 284 SKYYGESEERLREIFKEAEENAPAIIFIDEIDAIAPKREEVVGEVEKRVVSQLLTLMDGL 343
Query: 721 LASGKIKCIGATTFYEYRKYIENDQALAR-----RFVKINVPEPTISDGITILRGLRERF 557
GK+ IGAT + D AL R R +++ VP+ +G +E
Sbjct: 344 KGRGKVIVIGAT-----NRPDALDPALRRPGRFDREIEVGVPDK---------QGRKEIL 389
Query: 556 EAH-HGVKISDDALVFAV-KSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTML 383
+ H G+ I D AV K K + R I+ + S A N E+E + + L
Sbjct: 390 QIHTRGMPIEPDFEKDAVIKVLKDLEKDERFEKEKIEKIIEKVSKA--NSEDEIKEI--L 445
Query: 382 KEQMWSVELEIKAIEIDYEREK----------TDILAARINDLKIHLENLKNELIPLEES 233
KE +V +E++ ID E+ D+ A + L L N E
Sbjct: 446 KED-GNVYVEVRNRLIDKLLEELAEVTHGFVGADLAALAREAAMVVLRRLIN-----EGK 499
Query: 232 YNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIH-KKISELESIK 56
N E ++I + + ++L+ + +A K+ + E+ E+ P++H I LE +K
Sbjct: 500 INPEAESIP--REVLEELKVTKRDFYEALKMVEPSALREVLIEV-PNVHWDDIGGLEEVK 556
>gi|1850342 (U69668) Tpr [Homo sapiens]
Length = 2363
Score = 35.6 bits (80), Expect = 0.49
Identities = 35/126 (27%), Positives = 66/126 (51%), Gaps = 13/126 (10%)
Query: 418 NLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNEL---I 248
NLEN+ + V+ L+EQM ++ + ++ E T + A+ + E NEL I
Sbjct: 225 NLENKKEEVSRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASME-EKFHNELNAHI 283
Query: 247 PLEESY----NEEKKNITELKNLKQKLEKYNKKLADAEK-VRDHYTALE-----IKHEIL 98
L Y ++ + EL ++L K K+ +A K ++DH +E ++ E+L
Sbjct: 284 KLSNLYKSAADDSEAKSNELTRAVEELHKLLKEAGEANKAIQDHLLEVEQSKDQMEKEML 343
Query: 97 PHIHKKISELESIKAVVTS 41
I + ELE+ ++++
Sbjct: 344 EKIGRLEKELENANDLLSA 362
Score = 32.8 bits (73), Expect = 3.2
Identities = 36/118 (30%), Positives = 69/118 (57%), Gaps = 34/118 (28%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDY-------EREKTDILAAR-------INDLKI 278
L+N + + LK + ++E+++ + +E D L ++ +NDLK
Sbjct: 894 LKNAQKEIATLKRHLSNMEVQVASQSSQRTGKGQPSNKEDVDDLVSQLRQTEEQVNDLKE 953
Query: 277 HL-------ENLKNELIPLEESYNEEKKNITEL-KNLKQKLE-------KYNKKLADAEK 143
L E + + LEES N+EK+ E+ KN++ +L+ + KKL + EK
Sbjct: 954 RLKTSTSNVEQYQAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQLEKKLMEVEK 1013
Query: 142 VR-----DHYTALEIKHEILPHIHKKISELES 62
+ D A+E + L + K +S +++
Sbjct: 1014 EKQELQDDKRRAIESMEQQLSELKKTLSSVQN 1045
Score = 32.5 bits (72), Expect = 4.2
Identities = 30/86 (34%), Positives = 46/86 (52%), Gaps = 7/86 (8%)
Query: 325 REKTDILAA-------RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYN 167
+ KTD L A I +LK +LEN K E+ LEE N K T ++L++ +E
Sbjct: 202 KTKTDELLALGREKGNEILELKCNLENKKEEVSRLEEQMNGLK---TSNEHLQKHVEDLL 258
Query: 166 KKLADAEKVRDHYTALEIKHEILPHIHKKISEL 68
KL +A ++ ++E K + H K+S L
Sbjct: 259 TKLKEA---KEQQASMEEKFHNELNAHIKLSNL 288
>gi|4165154 (AF115482) topoisomerase I [Nicotiana tabacum]
Length = 852
Score = 35.6 bits (80), Expect = 0.49
Identities = 26/95 (27%), Positives = 50/95 (52%)
Query: 427 AIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELI 248
A+ NL N+ V ++ SV + +++I EK D L A + + K+ L K
Sbjct: 726 AVYNLANKE--VAIICNHQRSVS-KSHSVQISKLNEKIDELKALLEEFKVDLARAKKGKP 782
Query: 247 PLEESYNEEKKNITELKNLKQKLEKYNKKLADAEK 143
PL+ + + K+N+ + L++K+++ N K+ + EK
Sbjct: 783 PLKGADGKAKRNLAP-EALQKKIDQTNVKIENIEK 816
>gi|3881015|emb|CAA21049| (AL031637) similar to Spectrin repeat (16 domains); cDNA EST
yk304f1.5 comes from this gene; cDNA EST yk304f1.3 comes
from this gene; cDNA EST yk455d8.5 comes from this gene
[Caenorhabditis elegans] >gi|3881534|emb|CAB07725|
(Z93398) similar to Spectrin repeat (16 domains); cDNA
EST yk304f1.5 comes from this gene; cDNA EST yk304f1.3
comes from this gene; cDNA EST yk455d8.5 comes from this
gene [Caenorhabditis elegans]
Length = 3450
Score = 35.2 bits (79), Expect = 0.64
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 580 LRGLRER-FEAHHG---VKISDDALVFAVKSSKKYISNRRLPDIAID---LVDSA----- 437
L+GLR+ F+A +G V + L AV S+ I + RLP+ + L D A
Sbjct: 316 LKGLRDNIFDAINGLQTVNSEGETLSRAVDSAGAKIRSARLPEAQSEVEALQDQADNLER 375
Query: 436 CSSAIVNLEN--ESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENL 263
++ + N+ N ++PV + + ++ A E+D K A + L +
Sbjct: 376 ITNNLCNIPNVTRTEPVIQKSKDLRK-RVDSCAQELDARMGKL----AELESLDAEFDGA 430
Query: 262 KNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHK 83
KN+L ++++E K + ++ K+KL + ++ D V H I ++ I +
Sbjct: 431 KNKLSSFIGAFDDELKGLEKVSIDKEKLAEQRRQTQDL--VDKHSEGNAILDDV-EAIAQ 487
Query: 82 KISELESIKAVVTSKDIAEIISRLTR 5
K++ + K K + E+ +RL R
Sbjct: 488 KVTAEDPSKTGSAQKSVGELGARLQR 513
>gi|1065448 (U40409) weak similarity to S. cervisiae NUF1 protein (PIR:A49455)
[Caenorhabditis elegans]
Length = 407
Score = 35.2 bits (79), Expect = 0.64
Identities = 30/112 (26%), Positives = 51/112 (44%)
Query: 346 AIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYN 167
AIE ER+K + ARIN +KI+L + L+E EK I E+ +
Sbjct: 223 AIEKQQERQKVLNIEARINRMKINLTEAQAVADTLDEQALMEKLEIEEM----------S 272
Query: 166 KKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDIAEIISRL 11
K++ E RDH ++I + + K +++ K + K E++S +
Sbjct: 273 KRIRKLEDERDH-KEVDIDENMRQELAKIEKDVDERKTNLKDKVGGEVVSNV 323
>gi|2388564 (AC000098) ESTs gb|AA042402,gb|ATTS1380 come from this gene.
[Arabidopsis thaliana]
Length = 841
Score = 35.2 bits (79), Expect = 0.64
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 340 EIDYEREKTDILAARINDLKIHLENLKNEL--------IPLEESYNEEKKNITELKNLKQ 185
E+D + ++LA N LKI ++ L+ L L + E K IT+LK+ +
Sbjct: 394 ELDQSSAENELLADTNNQLKIKIQELEGYLDSEKETAIEKLNQKDTEAKDLITKLKSHEN 453
Query: 184 KLEKYNKKLADAEKVRDHYTALEIKHEILP--HIHKKISELESIKAVVTSKDIAEIISRL 11
+E++ +++ +A V D +E++ +L + I ELE + D+AE+ +L
Sbjct: 454 VIEEHKRQVLEASGVAD-TRKVEVEEALLKLNTLESTIEELEK-----ENGDLAEVNIKL 507
Query: 10 TR 5
+
Sbjct: 508 NQ 509
Score = 34.8 bits (78), Expect = 0.84
Identities = 34/120 (28%), Positives = 68/120 (56%), Gaps = 12/120 (10%)
Query: 421 VNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPL 242
+N + + ++Q+ S+E ++ ++ + +E T++ A + L + LEN + ++I L
Sbjct: 58 INKKYDDDDDEKAEKQLKSLEDALQLHDVKH-KELTEVKEA-FDGLGLELENSRKKMIEL 115
Query: 241 E----------ESYNE-EKKNITELKN-LKQKLEKYNKKLADAEKVRDHYTALEIKHEIL 98
E E E +K++ +EL+ LK E+Y+K A + + LE K + L
Sbjct: 116 EDRIRISALEAEKLEELQKQSASELEEKLKISDERYSKTDALLSQALSQNSVLEQKLKSL 175
Query: 97 PHIHKKISELES 62
+ +K+SEL+S
Sbjct: 176 EELSEKVSELKS 187
>gi|3327144|dbj|BAA31640| (AB014565) KIAA0665 protein [Homo sapiens]
Length = 756
Score = 35.2 bits (79), Expect = 0.64
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 385 LKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNIT 206
L+EQ+ EL + ++ R + ++L + I +ENL+ L L+E +E +
Sbjct: 504 LEEQLKEQELRACEMVLEETRRQKELLCKMEREKSIEIENLQTRLQQLDEENSELRSCTP 563
Query: 205 ELKNLKQKLEKYNKKLAD 152
LK ++LE+ +KL D
Sbjct: 564 CLKANIERLEEEKQKLLD 581
>gi|309708 (M77720) major merozoite surface antigen [Plasmodium falciparum]
>gi|309733 (M77733) major merozoite surface antigen
[Plasmodium falciparum]
Length = 213
Score = 35.2 bits (79), Expect = 0.64
Identities = 34/119 (28%), Positives = 60/119 (49%), Gaps = 7/119 (5%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKK---NITELKNLK 188
L+I+A E+D +L + + L+N+K+ + +E+ + KK NI EL
Sbjct: 54 LKIRANELD-------VLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKKTIENINELIEES 106
Query: 187 QKLEKYNKKLADAEKVRDHYTA---LEIKHEILPHIHKKISELES-IKAVVTSKDIAEII 20
+K NK E+ + Y A L I ++ L H IS LE I + +++I E++
Sbjct: 107 KKTIDKNKNATKEEEKKKLYQAQYDLFIYNKQLEEAHNLISVLEKRIDTLKKNENIKELL 166
Query: 19 SRLTRI 2
++ I
Sbjct: 167 DKINEI 172
>gi|224859|prf||1202270A antigen,major surface [Plasmodium falciparum]
Length = 1631
Score = 35.2 bits (79), Expect = 0.64
Identities = 34/119 (28%), Positives = 60/119 (49%), Gaps = 7/119 (5%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKK---NITELKNLK 188
L+I+A E+D +L + + L+N+K+ + +E+ + KK NI EL
Sbjct: 198 LKIRANELD-------VLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKKTIENINELIEES 250
Query: 187 QKLEKYNKKLADAEKVRDHYTA---LEIKHEILPHIHKKISELES-IKAVVTSKDIAEII 20
+K NK E+ + Y A L I ++ L H IS LE I + +++I E++
Sbjct: 251 KKTIDKNKNATKEEEKKKLYQAQYDLFIYNKQLEEAHNLISVLEKRIDTLKKNENIKELL 310
Query: 19 SRLTRI 2
++ I
Sbjct: 311 DKINEI 316
>gi|72393|pir||SAZQK1 major merozoite surface antigen precursor - Plasmodium falciparum
(strain K1/Thai)
Length = 1631
Score = 35.2 bits (79), Expect = 0.64
Identities = 34/119 (28%), Positives = 60/119 (49%), Gaps = 7/119 (5%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKK---NITELKNLK 188
L+I+A E+D +L + + L+N+K+ + +E+ + KK NI EL
Sbjct: 198 LKIRANELD-------VLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKKTIENINELIEES 250
Query: 187 QKLEKYNKKLADAEKVRDHYTA---LEIKHEILPHIHKKISELES-IKAVVTSKDIAEII 20
+K NK E+ + Y A L I ++ L H IS LE I + +++I E++
Sbjct: 251 KKTIDKNKNATKEEEKKKLYQAQYDLFIYNKQLEEAHNLISVLEKRIDTLKKNENIKELL 310
Query: 19 SRLTRI 2
++ I
Sbjct: 311 DKINEI 316
>gi|2136146|pir||S69211 serine/threonine-specific protein kinase (EC 2.7.1.-), Rho-associated
- human >gi|1276901 (U43195) Rho-associated, coiled-coil
containing protein kinase p160ROCK [Homo sapiens]
Length = 1354
Score = 35.2 bits (79), Expect = 0.64
Identities = 43/141 (30%), Positives = 72/141 (50%), Gaps = 24/141 (17%)
Query: 448 VDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLK---I 278
++ CS V+L+ Q + L +E E+K + + E+E L + N+LK
Sbjct: 737 IEKQCSMLDVDLKQSQQKLEHLTGNKERMEDEVKNLTLQLEQESNKRLLLQ-NELKTQAF 795
Query: 277 HLENLKNELIPLEESYNEEKKNITELK-----NLKQKLEKYN------KKLADAEKVRDH 131
+NLK LE+ +E + E K L Q ++Y ++L D + +
Sbjct: 796 EADNLKG----LEKQMKQEINTLLEAKRLLEFELAQLTKQYRGNEGQMRELQDQLEAEQY 851
Query: 130 YTAL------EIKHEILPHIH---KKISELESIK-AVVTSKDIAE 26
++ L E+K EI KKI EL++ K + T D+AE
Sbjct: 852 FSTLYKTQVKELKEEIEEKNRENLKKIQELQNEKETLATQLDLAE 896
>gi|1850913 (L03534) myosin heavy chain [Entamoeba histolytica]
Length = 2139
Score = 35.2 bits (79), Expect = 0.64
Identities = 29/82 (35%), Positives = 51/82 (61%), Gaps = 10/82 (12%)
Query: 418 NLENESQPVTMLKEQMWSVELEIKAI---------EID-YEREKTDILAARINDLKIHLE 269
N EN+++ + LKE+ ++E EI+ I EID +R+ +L ++ +D+ + E
Sbjct: 1733 NSENDAE-IDSLKEEKKALEDEIEKITDDNNKLSEEIDSLDRKYNALLDSKDSDVSMK-E 1790
Query: 268 NLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
++EL +++ EKKN E LK +LEK
Sbjct: 1791 KFQDELKVTKDALETEKKNHAETMRLKGRLEK 1822
Score = 32.1 bits (71), Expect = 5.6
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 11/113 (9%)
Query: 349 KAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYN--EEKKNITEL--KNLKQK 182
K +EI +EK D D + + ++ E+ L+E E KN TE K L+
Sbjct: 1209 KELEIQSLQEKLDETEVEKEDAEKKKKEIEKEMKALQEEKENVESSKNSTEKDKKKLEDN 1268
Query: 181 LEKYNKKL----ADAEKVRDHYTALEIKHEILPHIHKKI---SELESIKAVVTSKDIAEI 23
L+ KKL AD EK++ LE + + H+K +EL + K + K++ +
Sbjct: 1269 LKDTQKKLDDMTADNEKLKAKAKDLEAQLNEVQDNHEKAVADAELLNKKKAQSDKELNSL 1328
Query: 22 ISRL 11
+ L
Sbjct: 1329 KAEL 1332
>gi|3875751|emb|CAB04089| (Z81499) similar to myosin heavy chain; cDNA EST EMBL:T02297 comes
from this gene; cDNA EST EMBL:T00788 comes from this
gene; cDNA EST yk202c10.3 comes from this gene; cDNA EST
yk202c10.5 comes from this gene; cDNA EST yk205b2....
>gi|3876585|emb|CAB05505| (Z83107) similar to myosin
heavy chain; cDNA EST EMBL:T02297 comes from this gene;
cDNA EST EMBL:T00788 comes from this gene; cDNA EST
yk202c10.3 comes from this gene; cDNA EST yk202c10.5
comes from this gene; cDNA EST yk205b2....
Length = 1963
Score = 35.2 bits (79), Expect = 0.64
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 14/111 (12%)
Query: 337 IDYEREKTDILAARIN----DLK------IHLENLKNELIPLEESYNEEKKNIT-ELKNL 191
ID R+KTD LAA ++ DL+ +N + EL + E E K+++ E+K+L
Sbjct: 1462 IDEWRKKTDDLAAELDGAQRDLRNTSTDLFKAKNAQEELAEVVEGLRRENKSLSQEIKDL 1521
Query: 190 KQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKIS---ELESIKAVVTSKDIAEII 20
+L + + + + +K+ LEI+ E L H + E E K + ++++I
Sbjct: 1522 TDQLGEGGRSVHEMQKI---IRRLEIEKEELQHALDEAEAALEAEESKVLRAQVEVSQIR 1578
Query: 19 SRLTR 5
S + +
Sbjct: 1579 SEIEK 1583
>gi|107134|pir||S12459 myosin beta heavy chain, skeletal muscle, embryonic (clone gtMHC-F)
- human (fragment) >gi|29466|emb|CAA35941| (X51592)
fetal-myosin heavy chain (1437 AA) [Homo sapiens]
Length = 1437
Score = 35.2 bits (79), Expect = 0.64
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E KA++ +++
Sbjct: 453 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MAGLDETIAKLSKEKKALQETHQQTL 509
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEK 143
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE + KLA E
Sbjct: 510 DDLQAEEDKVNILTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEG-DLKLAQ-ES 567
Query: 142 VRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDIAEI 23
D+ K ++ + KK E+ ++ + + + EI
Sbjct: 568 TMDNEND---KQQLDEKLEKKEFEISNLISKIEDEQAVEI 604
>gi|4155457 (AE001518) putative [Helicobacter pylori J99]
Length = 267
Score = 35.2 bits (79), Expect = 0.64
Identities = 31/88 (35%), Positives = 44/88 (49%), Gaps = 15/88 (17%)
Query: 439 ACSSAIVNLENESQPV---------TMLKEQMWSVELEIKAIEIDYERE------KTDIL 305
A + AI+NLE E + T+ ++ K EI ERE + DI
Sbjct: 41 AKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIA 100
Query: 304 AARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
R N +ENL+NE+ E KK + EL+ L +LE
Sbjct: 101 KERSNQANREIENLQNEIKHKSEKQEVLKKEMLELEKLALELE 143
>gi|127743|sp|P02566|MYSB_CAEEL MYOSIN HEAVY CHAIN B (MHC B) >gi|71606|pir||MWKW myosin heavy chain B
- Caenorhabditis elegans >gi|156400 (J01050) myosin heavy
chain (isozyme unc-54) [Caenorhabditis elegans]
Length = 1966
Score = 35.2 bits (79), Expect = 0.64
Identities = 33/111 (29%), Positives = 61/111 (54%), Gaps = 14/111 (12%)
Query: 337 IDYEREKTDILAARIN----DLK------IHLENLKNELIPLEESYNEEKKNIT-ELKNL 191
ID R+KTD LAA ++ DL+ +N + EL + E E K+++ E+K+L
Sbjct: 1465 IDEWRKKTDDLAAELDGAQRDLRNTSTDLFKAKNAQEELAEVVEGLRRENKSLSQEIKDL 1524
Query: 190 KQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKIS---ELESIKAVVTSKDIAEII 20
+L + + + + +K+ LEI+ E L H + E E K + ++++I
Sbjct: 1525 TDQLGEGGRSVHEMQKI---IRRLEIEKEELQHALDEAEAALEAEESKVLRAQVEVSQIR 1581
Query: 19 SRLTR 5
S + +
Sbjct: 1582 SEIEK 1586
>gi|4504867|oth|NP_003949|PKIAA0646 UNKNOWN >gi|3327106|dbj|BAA31621| (AB014546) KIAA0646 protein [Homo
sapiens] >gi|3721580|dbj|BAA33557| (AB012770) new zinc
finger protein [Homo sapiens]
Length = 485
Score = 35.2 bits (79), Expect = 0.64
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 22/165 (13%)
Query: 625 KINVPEPTISDGITILRGLRERFEAHHGVKISDDAL------VFAVKSS---KKYISNRR 473
K+ EP+ + G I G + E HH K S+ + +F V S + I +
Sbjct: 206 KLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNSSASQRSLQMFKVTMSRILRLKIQMQE 265
Query: 472 LPDIAIDL---VDSACSSAIVNLENESQPV-TMLKEQMWSVELEIKAIEIDYEREKTDIL 305
+ +++ S +V +E E Q + + L + + ++ +E ++ E+ +
Sbjct: 266 KHEAVMNVKKQTQKGNSKKVVQMEQELQDLQSQLCAEQAQQQARVEQLEKTFQEEEQHLQ 325
Query: 304 AARI----NDLKIHLENLKNELIPLEESYNEEKKNITEL-----KNLKQKLEKYNKKLAD 152
I DLK L E L E N KK+ + K L+Q E+ K A
Sbjct: 326 GLEIAQGEKDLKQQLAQALQEHWALMEELNRSKKDFEAIIQAKNKELEQTKEEKEKMQAQ 385
Query: 151 AEKVRDH 131
E+V H
Sbjct: 386 KEEVLSH 392
>gi|3821963 (AF061135) merozoite surface protein 1 [Plasmodium falciparum]
Length = 362
Score = 35.2 bits (79), Expect = 0.64
Identities = 34/119 (28%), Positives = 60/119 (49%), Gaps = 7/119 (5%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKK---NITELKNLK 188
L+I+A E+D +L + + L+N+K+ + +E+ + KK NI EL
Sbjct: 198 LKIRANELD-------VLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKKTIENINELIEES 250
Query: 187 QKLEKYNKKLADAEKVRDHYTA---LEIKHEILPHIHKKISELES-IKAVVTSKDIAEII 20
+K NK E+ + Y A L I ++ L H IS LE I + +++I E++
Sbjct: 251 KKTIDKNKNATKEEEKKKLYQAQYDLFIYNKQLEEAHNLISVLEKRIDTLKKNENIKELL 310
Query: 19 SRLTRI 2
++ I
Sbjct: 311 DKINEI 316
>gi|417392|sp|P32380|NUF1_YEAST NUF1 PROTEIN (SPINDLE POLY BODY SPACER PROTEIN SPC110)
>gi|283221|pir||S26710 spindle pole body protein NUF1 -
yeast (Saccharomyces cerevisiae) >gi|4070|emb|CAA77668|
(Z11582) nuf1 [Saccharomyces cerevisiae]
>gi|312175|emb|CAA51733| (X73297) SPC110/NUF1
[Saccharomyces cerevisiae] >gi|849173 (U28372) Nuf1p:
Probable essential component of the nucleoskeleton
(Swiss Prot. accession number P32380) [Saccharomyces
cerevisiae]
Length = 944
Score = 35.2 bits (79), Expect = 0.64
Identities = 40/174 (22%), Positives = 92/174 (51%), Gaps = 27/174 (15%)
Query: 523 ALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENE----SQPVTMLKEQMWSVE- 359
AL + + K +++R++ D S C +E + + + +K+Q+ +E
Sbjct: 202 ALEKELDAKNKIVNSRKVDD------HSGCIEEREQMERKLAELERKLKTVKDQVLELEN 255
Query: 358 -LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK 182
+++++++ + ++ L +N+LK + E + LE NE +K EL LK K
Sbjct: 256 NSDVQSLKLRSKEDELKNLMNELNELKSNAEEKDTQ---LEFKKNELRKRTNELNELKIK 312
Query: 181 LEKYN----KKLADAEKVRDHYTALE-----------IKHEILPHIHKKISELE------ 65
++ + +K ++++++D LE K L + KI+ELE
Sbjct: 313 SDEMDLQLKQKQNESKRLKDELNELETKFSENGSQSSAKENELKMLKNKIAELEEEISTK 372
Query: 64 SIKAVVTSKDIAEIISRLTRI 2
+ + + +A ++++LT++
Sbjct: 373 NSQLIAKEGKLASLMAQLTQL 393
Score = 35.2 bits (79), Expect = 0.64
Identities = 26/87 (29%), Positives = 46/87 (51%), Gaps = 3/87 (3%)
Query: 295 INDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK---YNKKLADAEKVRDHYT 125
I LK ++ L+ E +Y+ ++ +LKN Q LEK K+ ++ KV DH
Sbjct: 165 IKSLKHEIKELRKEKNDTLNNYDTLEEETDDLKNRLQALEKELDAKNKIVNSRKVDDHSG 224
Query: 124 ALEIKHEILPHIHKKISELESIKAVVTSKD 35
+E + + + +K++ELE + + T KD
Sbjct: 225 CIEEREQ----MERKLAELE--RKLKTVKD 248
Score = 33.6 bits (75), Expect = 1.9
Identities = 36/169 (21%), Positives = 78/169 (45%), Gaps = 6/169 (3%)
Query: 517 VFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIE 338
+F +K K + ++ + D ++ D +L+ + + +++++ E K E
Sbjct: 450 LFVIK--KTHSESKTITDNELESKDKLIKILENDLKVAQEKYSKMEKELKEREFNYKISE 507
Query: 337 IDYEREKTDI------LAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
E EKT + LAA + LK +E+ ++E+Y + +L++L++ +E
Sbjct: 508 SKLEDEKTTLNEKISNLAAENSQLKNKIEDNSTATHHMKENYEK------QLESLRKDIE 561
Query: 175 KYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDIAEIISRL 11
+Y + D+E D L+I+ + K+SE S + I+++ L
Sbjct: 562 EYKESAKDSE---DKIEELKIR---IAENSAKVSEKRSKDIKQKDEQISDLTQNL 610
>gi|3881016|emb|CAA21050| (AL031637) similar to Spectrin repeat (16 domains); cDNA EST
yk235h7.5 comes from this gene [Caenorhabditis elegans]
>gi|3881535|emb|CAB07726| (Z93398) similar to Spectrin
repeat (16 domains); cDNA EST yk235h7.5 comes from this
gene [Caenorhabditis elegans]
Length = 3461
Score = 35.2 bits (79), Expect = 0.64
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 580 LRGLRER-FEAHHG---VKISDDALVFAVKSSKKYISNRRLPDIAID---LVDSA----- 437
L+GLR+ F+A +G V + L AV S+ I + RLP+ + L D A
Sbjct: 316 LKGLRDNIFDAINGLQTVNSEGETLSRAVDSAGAKIRSARLPEAQSEVEALQDQADNLER 375
Query: 436 CSSAIVNLEN--ESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENL 263
++ + N+ N ++PV + + ++ A E+D K A + L +
Sbjct: 376 ITNNLCNIPNVTRTEPVIQKSKDLRK-RVDSCAQELDARMGKL----AELESLDAEFDGA 430
Query: 262 KNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHK 83
KN+L ++++E K + ++ K+KL + ++ D V H I ++ I +
Sbjct: 431 KNKLSSFIGAFDDELKGLEKVSIDKEKLAEQRRQTQDL--VDKHSEGNAILDDV-EAIAQ 487
Query: 82 KISELESIKAVVTSKDIAEIISRLTR 5
K++ + K K + E+ +RL R
Sbjct: 488 KVTAEDPSKTGSAQKSVGELGARLQR 513
>gi|323141|pir||A45604 major blood-stage surface antigen Pv200 - Plasmodium vivax >gi|457336
(M75674) Pv200 [Plasmodium vivax]
Length = 1751
Score = 35.2 bits (79), Expect = 0.64
Identities = 25/98 (25%), Positives = 42/98 (42%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEE 236
LE++ +T + E W EI+ ++K + K+ LE L + +
Sbjct: 1038 LESQKDEITKMDETKWKA----LGAEIEELKKKLQVSLDHYGKYKLKLERLLKK----KN 1089
Query: 235 SYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTA 122
+ K I +L +LK KLE+ L + V +YTA
Sbjct: 1090 KISNSKDQIKKLTSLKNKLERRQNLLNNPTSVLKNYTA 1127
>gi|127747|sp|P04461|MYSB_RABIT MYOSIN HEAVY CHAIN, CARDIAC MUSCLE BETA ISOFORM (BETA ISOMYOSIN)
>gi|165537 (K02444) beta-myosin heavy chain [Oryctolagus
cuniculus]
Length = 736
Score = 35.2 bits (79), Expect = 0.64
Identities = 35/122 (28%), Positives = 61/122 (49%), Gaps = 7/122 (5%)
Query: 412 ENESQPVTM------LKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNEL 251
E E + TM +KE + E K +E EKT L NDL++ ++ ++ L
Sbjct: 408 ETEKEMATMKEEFARVKEALEKSEARRKELE-----EKTVSLLQEKNDLQLQVQAEQDNL 462
Query: 250 IPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIK-HEILPHIHKKIS 74
EE ++ KN + L+ K+++ N++L D E++ TA + K + + + I
Sbjct: 463 ADAEERCDQLIKNKIQ---LEAKVKEMNERLEDEEEMNAELTAKKRKLEDECSELKRDID 519
Query: 73 ELESIKAVV 47
+LE A V
Sbjct: 520 DLELTLAKV 528
>gi|1503990|dbj|BAA13194| (D86958) similar to mouse CC1. [Homo sapiens]
Length = 1591
Score = 35.2 bits (79), Expect = 0.64
Identities = 38/192 (19%), Positives = 88/192 (45%), Gaps = 5/192 (2%)
Query: 589 ITILRGLRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLE 410
+ +LR + E H ++ D V ++ +K +++ R ++++ + + I+N
Sbjct: 973 LQLLRAELQSLEQSHLKELEDTLQVRHIQEFEKVMTDHR---VSLEELKKE-NQQIINQI 1028
Query: 409 NESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESY 230
ES + +++ EL++K ++ R K ++ +L + I LEES
Sbjct: 1029 QESHAEIIQEKEKQLQELKLKVSDLSDTRCKLEV------ELALKEAETDEIKILLEESR 1082
Query: 229 NEEKKNITEL-----KNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELE 65
++K+ + L +NL+ ++ K N+K+ D + + ++EL
Sbjct: 1083 AQQKETLKSLLEQETENLRTEISKLNQKIQDNNE----------------NYQVGLAELR 1126
Query: 64 SIKAVVTSKDIAEIISR 14
++ + + I+E+ISR
Sbjct: 1127 TLMTIEKDQCISELISR 1143
>gi|3821961 (AF061134) merozoite surface protein 1 [Plasmodium falciparum]
Length = 347
Score = 35.2 bits (79), Expect = 0.64
Identities = 34/119 (28%), Positives = 60/119 (49%), Gaps = 7/119 (5%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKK---NITELKNLK 188
L+I+A E+D +L + + L+N+K+ + +E+ + KK NI EL
Sbjct: 198 LKIRANELD-------VLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKKTIENINELIEES 250
Query: 187 QKLEKYNKKLADAEKVRDHYTA---LEIKHEILPHIHKKISELES-IKAVVTSKDIAEII 20
+K NK E+ + Y A L I ++ L H IS LE I + +++I E++
Sbjct: 251 KKTIDKNKNATKEEEKKKLYQAQYDLFIYNKQLEEAHNLISVLEKRIDTLKKNENIKELL 310
Query: 19 SRLTRI 2
++ I
Sbjct: 311 DKINEI 316
>gi|3986194|dbj|BAA34954| (AB015484) myosin heavy chain [Dugesia japonica]
Length = 1958
Score = 34.8 bits (78), Expect = 0.84
Identities = 49/191 (25%), Positives = 92/191 (47%), Gaps = 15/191 (7%)
Query: 610 EPTISDGITILRGLRERFE------AHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDL 449
+ T+ D + R L E+ + ++ KI D++ + A K R+ ++ DL
Sbjct: 1056 QETVDDLERVKRELEEQLKRKEMELSNASSKIEDESGLVAQLQKKIKELQARIQELEEDL 1115
Query: 448 VDSACSSAIVN-----LENESQPVT-MLKEQ--MWSVELEI-KAIEIDYEREKTDILAAR 296
+ A LE E + ++ L+EQ S +LE+ K E + + K D+ A
Sbjct: 1116 EAERQARAKAEKSRHQLEGELEELSDRLEEQGGATSAQLELNKKREAELLKLKRDLEEAN 1175
Query: 295 INDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALE 116
+ ++ ++ K + ++ NE + +L+ K K+EK ++ E + D + LE
Sbjct: 1176 MQHDQMIAQSRKKQ----QDVANEFSDQLDQLQKAKAKIEKEKNEMK--EDLNDLQSQLE 1229
Query: 115 IKHEILPHIHKKISELESIKAVVTSK 38
++ + KKI ELES A + K
Sbjct: 1230 ALNKAKANSDKKIKELESQNAELQGK 1255
Score = 31.3 bits (69), Expect = 9.5
Identities = 39/135 (28%), Positives = 67/135 (48%), Gaps = 6/135 (4%)
Query: 406 ESQPVTMLKEQMWSVELEIKAIE-IDYEREKTDILAARINDLKIHLENLKNELIPLEESY 230
E + M KE+ + EL+ K E + E EK +N K LE +E+ EE+
Sbjct: 979 EEEMNKMKKEKKAADELQKKTEESLQAEEEKVK----NLNKAKAKLEQTIDEM---EENL 1031
Query: 229 NEEKKNITELKNLKQKLEKYNKK----LADAEKV-RDHYTALEIKHEILPHIHKKISELE 65
+ E+K +++ +K+K+E K+ + D E+V R+ L+ K L + KI + E
Sbjct: 1032 SREQKVRADVEKVKRKIETELKQTQETVDDLERVKRELEEQLKRKEMELSNASSKIED-E 1090
Query: 64 SIKAVVTSKDIAEIISRLTRI 2
S K I E+ +R+ +
Sbjct: 1091 SGLVAQLQKKIKELQARIQEL 1111
>gi|266596|sp|P29616|MYSC_CHICK MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ISOFORM
Length = 1102
Score = 34.8 bits (78), Expect = 0.84
Identities = 39/145 (26%), Positives = 73/145 (49%), Gaps = 21/145 (14%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + + ++ A + + NL E + L E + + E K+++ +++
Sbjct: 117 KKDIDDLEITLAKVEKEKHATENKVKNLTEE---MATLDENISKLTKEKKSLQEAHQQVL 173
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE----------- 176
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 174 DDLQAEEDKVNTLSKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESVM 233
Query: 175 -KYNKKLADAEKVRDH-------YTALEIKHEILPHIHKKISELES 62
N KL EK++ + +E + I+ + KKI EL++
Sbjct: 234 DLENDKLQMEEKLKKKEFEMSQLNSKIEDEQAIVMQLQKKIKELQA 279
Score = 32.8 bits (73), Expect = 3.2
Identities = 36/152 (23%), Positives = 79/152 (51%), Gaps = 18/152 (11%)
Query: 556 EAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKE 377
EA ++ ++ A +++ +K + N + D+ IDL +SA +L+ + + +
Sbjct: 565 EAEEAIEAAN-AKCSSLEKAKHRLQNEQ-EDMMIDL--EKANSAAASLDKKQRGFDKIIN 620
Query: 376 QMWSVELEIKAIEIDYEREKTDILAARINDLKI-------HLENLKNELIPLEE------ 236
W + E E++ +++ L+ + LK HLE LK E L+E
Sbjct: 621 D-WKQKYEESQAELEASQKEARSLSTELFKLKNAYEETLDHLETLKRENKNLQEEISDLT 679
Query: 235 -SYNEEKKNITELKNLKQKLEKYNKK----LADAEKVRDHYTALEIKHEI 101
+E KN+ E++ +K+++E+ + L +AE +H + ++ ++
Sbjct: 680 NQISEGNKNLHEIEKVKKQVEQEKSEVQLALEEAEGALEHEESKTLRFQL 729
>gi|868224 (U29381) F35D11.11 gene product [Caenorhabditis elegans]
Length = 1827
Score = 34.8 bits (78), Expect = 0.84
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 460 AIDLVDSACSSAIVNLENESQPVTMLKEQ---MWSVELEIK------AIEIDYEREKTDI 308
+I+ ++S I LE + LK++ M E+K + + + ER+K
Sbjct: 993 SINALESNTMELISKLETTEAELEKLKDELAVMLKQNSELKNGKEGLSEKWNEERKKIQD 1052
Query: 307 LAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
LA ++ + + N++ + + LEE NE +N+T+L N ++LE
Sbjct: 1053 LADQLREANKVVHNMRMKNVNLEEKKNELDQNVTDLTNKVRQLE 1096
>gi|1289512 (U53861) slow myosin heavy chain 3 [Coturnix coturnix] >gi|1289514
(U53862) slow myosin heavy chain 3 [Coturnix coturnix]
Length = 1931
Score = 34.8 bits (78), Expect = 0.84
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 2/148 (1%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E K ++ +++
Sbjct: 946 KKDIDDLELSLAKVEKEKHATENKVKNLTEE---MAGLDENITKLTKEKKTLQESHQQAL 1002
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEK 143
D+ A ++N L L+ + LE S +EKK +L+ K+KLE + KLA E
Sbjct: 1003 DDLQAEEDKVNTLAKAKVKLEQQADDLESSLQQEKKIRMDLERAKRKLEG-DLKLAQ-ES 1060
Query: 142 VRDHYTALEIKHEILPHIHKKISELESIKA 53
V D K ++ + KK EL ++ A
Sbjct: 1061 VMD---LENDKQQLEERLKKKDFELNTLNA 1087
Score = 32.1 bits (71), Expect = 5.6
Identities = 41/165 (24%), Positives = 77/165 (45%), Gaps = 7/165 (4%)
Query: 571 LRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPV 392
L+E EA V +A +++ +K + N + D+ D+ S ++A ++ + +
Sbjct: 1392 LQEAEEAVEAV----NAKCSSLEKTKHRLQNE-IEDLMADVERSNAAAAALDKKQRNFDK 1446
Query: 391 TMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKI-------HLENLKNELIPLEES 233
+ + W + E E++ +++ L+ + LK HLE K E L+E
Sbjct: 1447 ILSE---WKQKFEESQTELEASQKEARSLSTELFKLKNAYEESLEHLETFKRENKNLQEE 1503
Query: 232 YNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKI 77
++ + + + +LEK K+L DAEK+ + ALE L H KI
Sbjct: 1504 ISDLTEQLGASQKSIHELEKVRKQL-DAEKL-ELQAALEEAEASLEHEEGKI 1553
>gi|2351221|dbj|BAA22068| (D89991) myosin heavy chain [Cyprinus carpio]
Length = 1931
Score = 34.8 bits (78), Expect = 0.84
Identities = 32/111 (28%), Positives = 55/111 (48%), Gaps = 11/111 (9%)
Query: 370 WSVELEIKAIEIDYEREKTDILAARINDLKI-------HLENLKNELIPLEESYNEEKKN 212
W + E E++ +++ L+ + +K HLE LK E L++ ++ +
Sbjct: 1454 WKQKYEESQAELEAAQKEARSLSTELFKMKNSYEEALDHLETLKRENKNLQQEISDLSEQ 1513
Query: 211 ITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVT 44
+ E +LEK KK+ ++EK + TALE L H KI EL +K+ +
Sbjct: 1514 LGETGKSIHELEK-AKKIVESEKA-EIQTALEEAESTLEHEESKILRVQLELNQVKSEID 1571
Query: 43 SK 38
K
Sbjct: 1572 RK 1573
Score = 34.4 bits (77), Expect = 1.1
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 21/145 (14%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + E + + E KA++ +++
Sbjct: 949 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MACQDESIAKLTKEKKALQEAHQQTL 1005
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE----------- 176
D+ A ++N L L+ ++ LE S +EKK +L+ +K+KLE
Sbjct: 1006 DDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERVKRKLEGDLKLAQESIM 1065
Query: 175 -KYNKKLADAEKVR-------DHYTALEIKHEILPHIHKKISELES 62
N+K EK++ + +E + + + KKI EL++
Sbjct: 1066 DLENEKQQSDEKIKKKDFEISQFLSKIEDEQSLGAQLQKKIKELQA 1111
>gi|2129235|pir||D64410 replication factor C large chain homolog - Methanococcus jannaschii
>gi|1591562 (U67532) activator 1 (replication factor C),
53 KD subunit [Methanococcus jannaschii]
Length = 516
Score = 34.8 bits (78), Expect = 0.84
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 337 IDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKL 158
+DY K D L + D L +E++ + E+KK + K K+KLEK KK
Sbjct: 386 VDYFEIKEDELKVLVGD------KLASEILKI---LKEKKKLERKKKKEKEKLEKEKKK- 435
Query: 157 ADAEKVRDHYTAL-----EIKHEILPHIHKKISELESIKAVVTSKDIAEIISRLTR 5
EK ++ + L EIK E+ + KK E +K + K AE + ++
Sbjct: 436 --EEKAKEKQSNLIIQPKEIKEEVKAEVEKK----EEVKEKIVEKPKAEEVKEKSK 485
>gi|1171612|emb|CAA64596| (X95276) Clp (C?) [Plasmodium falciparum]
Length = 766
Score = 34.8 bits (78), Expect = 0.84
Identities = 24/103 (23%), Positives = 47/103 (45%)
Query: 736 MLKPSLASGKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERF 557
+L L I I T EY Y + + F KI + + +I I++ ++
Sbjct: 286 LLLNKLYGYNIHIIIVTNKKEYNTYFKYNIIKDSYFYKIRIKDLSILQTFLIIKNNIYKY 345
Query: 556 EAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSS 428
++ + I++ + + SKKYI LP + L++++CS+
Sbjct: 346 INYYKININNYIIYELINLSKKYIKPLILPTTPLILLENSCSN 388
>gi|283896|pir||S18199 myosin heavy chain - chicken (fragment) >gi|62996|emb|CAA42130|
(X59552) myosin heavy chain [Gallus gallus]
Length = 1039
Score = 34.8 bits (78), Expect = 0.84
Identities = 39/145 (26%), Positives = 73/145 (49%), Gaps = 21/145 (14%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + + ++ A + + NL E + L E + + E K+++ +++
Sbjct: 54 KKDIDDLEITLAKVEKEKQATENKVKNLTEE---MATLDENISKLTKEKKSLQEAHQQVL 110
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE----------- 176
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 111 DDLQAEEDKVNRLSKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESVM 170
Query: 175 -KYNKKLADAEKVRDH-------YTALEIKHEILPHIHKKISELES 62
N KL EK++ + +E + I+ + KKI EL++
Sbjct: 171 DLENDKLQMEEKLKKKEFEMSQLNSKIEDEQAIVMQLQKKIKELQA 216
Score = 32.8 bits (73), Expect = 3.2
Identities = 36/152 (23%), Positives = 79/152 (51%), Gaps = 18/152 (11%)
Query: 556 EAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKE 377
EA ++ ++ A +++ +K + N + D+ IDL +SA +L+ + + +
Sbjct: 502 EAEEAIEAAN-AKCSSLEKAKHRLQNEQ-EDMMIDL--EKANSAAASLDKKQRGFDKIIN 557
Query: 376 QMWSVELEIKAIEIDYEREKTDILAARINDLKI-------HLENLKNELIPLEE------ 236
W + E E++ +++ L+ + LK HLE LK E L+E
Sbjct: 558 D-WKQKYEESQAELEASQKEARSLSTELFKLKNAYEETLDHLETLKRENKNLQEEISDLT 616
Query: 235 -SYNEEKKNITELKNLKQKLEKYNKK----LADAEKVRDHYTALEIKHEI 101
+E KN+ E++ +K+++E+ + L +AE +H + ++ ++
Sbjct: 617 NQISEGNKNLHEIEKVKKQVEQEKSEVQLALEEAEGALEHEESKTLRFQL 666
>gi|31144|emb|CAA31492| (X13100) myosin heavy chain (1167 AA) [Homo sapiens]
>gi|226485|prf||1515249A myosin H [Homo sapiens]
Length = 1167
Score = 34.8 bits (78), Expect = 0.84
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E ++ L E + + E KA++ +++
Sbjct: 179 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---LSGLDETIAKLTREKKALQEAHQQAL 235
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 236 DDLQAEEDKVNSLNKTKSKLEQQVEDLESSLEQEKKLRVDLERNKRKLE 284
>gi|171959 (L01992) myosin-like protein [Saccharomyces cerevisiae]
Length = 1875
Score = 34.8 bits (78), Expect = 0.84
Identities = 21/64 (32%), Positives = 34/64 (52%)
Query: 364 VELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ 185
VELE K I+ +E+TD+L +N+ + LE+ NE + N + + + E +N Q
Sbjct: 412 VELEHKVPIINSFKERTDMLENELNNAALLLEHTSNEKNAKVKELNAKNQKLVECENDLQ 471
Query: 184 KLEK 173
L K
Sbjct: 472 TLTK 475
Score = 32.8 bits (73), Expect = 3.2
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 355 EIKAIEIDYEREKT--DILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK 182
E+ + D++ E+T D+L + N+L L+ E+ L +S N EK+ + +LKQ
Sbjct: 242 ELNRLRNDFQMERTNNDVLKQKNNELSKSLQEKLLEIKGLSDSLNSEKQEFSAEMSLKQA 301
Query: 181 L 179
L
Sbjct: 302 L 302
>gi|547908|sp|Q02455|MLP1_YEAST MYOSIN-LIKE PROTEIN MLP1 >gi|539299|pir||S38173 myosin-like protein
MLP1 - yeast (Saccharomyces cerevisiae)
>gi|450554|emb|CAA51948| (X73541) MPL1 [Saccharomyces
cerevisiae] >gi|486587|emb|CAA82174| (Z28320) ORF
YKR095w [Saccharomyces cerevisiae]
Length = 1875
Score = 34.8 bits (78), Expect = 0.84
Identities = 21/64 (32%), Positives = 34/64 (52%)
Query: 364 VELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ 185
VELE K I+ +E+TD+L +N+ + LE+ NE + N + + + E +N Q
Sbjct: 412 VELEHKVPIINSFKERTDMLENELNNAALLLEHTSNEKNAKVKELNAKNQKLVECENDLQ 471
Query: 184 KLEK 173
L K
Sbjct: 472 TLTK 475
Score = 34.0 bits (76), Expect = 1.4
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 355 EIKAIEIDYEREKT--DILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK 182
E+ + D++ E+T D+L + N+L L+ E+ L +S N EK+ + +LKQ+
Sbjct: 242 ELNRLRNDFQMERTNNDVLKQKNNELSKSLQEKLLEIKGLSDSLNSEKQEFSAEMSLKQR 301
Query: 181 L 179
L
Sbjct: 302 L 302
>gi|285152|pir||S28061 SCP1 protein - rat >gi|57213|emb|CAA48006| (X67805) SCP1 [Rattus
norvegicus]
Length = 946
Score = 34.8 bits (78), Expect = 0.84
Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 26/268 (9%)
Query: 835 QIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASGKIKCIGATTFYEYRKYIE 656
Q E++ S+ +E N + N+LK + A K T+ YEY + E
Sbjct: 102 QFENEKVSLKLEEEIQENKDLIKENNATRHWCNLLKETCARSAEK----TSKYEYERE-E 156
Query: 655 NDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKISDDALVFAVKSSKKYISNR 476
Q + N+ + ++ ++ R E H +K + + + +K ++N+
Sbjct: 157 TRQVYVD--LNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYQKEVNNK 214
Query: 475 RLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSV--ELEIKAIEIDYE----REKT 314
+++ L+ S EN+ + +T L E+ +LE K D EK
Sbjct: 215 E-NQVSLLLIQST------EKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELNEKK 267
Query: 313 DILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ-KLEKYNKKLAD----- 152
D L + + D+K+ ++ + LEE K I +L K+ ++E+ NK
Sbjct: 268 DHLTSELEDIKMSMQRSMSTQKTLEEDLQIATKTIYQLTEEKEAQMEELNKAKTTHSLVV 327
Query: 151 ----------AEKVRDHYTALEIKHE----ILPHIHKKISELESIKAVVTSKDI 32
E +R LE + I + KK SELE + +K++
Sbjct: 328 TELKATTCTLEELLRTEQQRLENNEDQLKLITMELQKKSSELEEMTKFKNNKEV 381
Score = 31.7 bits (70), Expect = 7.3
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 355 EIKAIEIDYEREKTD----ILAARINDLKIHLENL---------KNELIPLEESYNEEKK 215
E A I+YE K + IL + N+LK +EN +N+ + + S ++
Sbjct: 548 EENARSIEYEVLKKEKQMKILENKCNNLKKQIENKSKNIEELHQENKALKKKSSAENKQL 607
Query: 214 NITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVV 47
N E+K K +LE + K E + ++ +EIK K + E+E KA V
Sbjct: 608 NAYEIKVNKLELELASTKQKFEEMINNYQKEIEIKK---ISEEKLLGEVEKAKATV 660
>gi|3258278|dbj|BAA30961| (AP000007) 798aa long hypothetical transitional endoplasmic
reticulum ATPase [Pyrococcus horikoshii]
Length = 798
Score = 34.8 bits (78), Expect = 0.84
Identities = 44/184 (23%), Positives = 81/184 (43%), Gaps = 12/184 (6%)
Query: 883 TQYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLD------CTNMLKPS 722
++Y G+ EER + + K+ E + SI+F+DE + + G ++ ++
Sbjct: 257 SKYYGESEERLREVFKEAEENAPSIIFIDEIDAIAPKRSEVTGEVEKRVVAQLLALMDGL 316
Query: 721 LASGKIKCIGATTFYEYRKYIENDQALAR-----RFVKINVPEPTISDGITILRGLRERF 557
GK+ IGAT + D AL R R +++ VP+ +G +E
Sbjct: 317 KGRGKVIVIGAT-----NRPDALDPALRRPGRFDREIEVGVPDK---------QGRKEIL 362
Query: 556 EAH-HGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLK 380
+ H G+ I D F + K + + D++D A + E++ V LK
Sbjct: 363 QIHTRGMPIEPD---FRKEDVLKILEGLKKEGKFRDVIDKAIDRVMKVSEDDIPKV--LK 417
Query: 379 EQMWSVELEIKAIEID 332
E + E++ +D
Sbjct: 418 ELNGELYEEVRTRLVD 433
>gi|479891|pir||S35575 myosin heavy chain, cardiac muscle - chicken >gi|455647|bbs|140004
myosin heavy chain subfragment-2, MHC S-2 [chickens,
cardiac ventricular muscle myosin, Peptide, 520 aa]
>gi|449407|prf||1919241A myosin subfragment 2 [Gallus
gallus]
Length = 520
Score = 34.8 bits (78), Expect = 0.84
Identities = 39/145 (26%), Positives = 73/145 (49%), Gaps = 21/145 (14%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + + ++ A + + NL E + L E + + E K+++ +++
Sbjct: 117 KKDIDDLEITLAKVEKEKHATENKVKNLTEE---MATLDENISKLTKEKKSLQEAHQQVL 173
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE----------- 176
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 174 DDLQAEEDKVNTLSKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESVM 233
Query: 175 -KYNKKLADAEKVRDH-------YTALEIKHEILPHIHKKISELES 62
N KL EK++ + +E + I+ + KKI EL++
Sbjct: 234 DLENDKLQMEEKLKKKEFEMSQLNSKIEDEQAIVMQLQKKIKELQA 279
>gi|86364|pir||S05515 myosin heavy chain, skeletal muscle - chicken (fragment)
Length = 429
Score = 34.8 bits (78), Expect = 0.84
Identities = 37/150 (24%), Positives = 69/150 (45%), Gaps = 3/150 (2%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + +L E + + E KA++ +++
Sbjct: 112 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MAVLDETIAKLTKEKKALQEAHQQTL 168
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEK 143
D+ ++N L L+ ++ LE S +EKK +L+ K+KLE D +
Sbjct: 169 DDLQVEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLE------GDLKL 222
Query: 142 VRDHYTALE-IKHEILPHIHKKISELESIKAVV 47
D LE K ++ + KK E+ I++ +
Sbjct: 223 AHDSIMDLENDKQQLDEKLKKKDFEISQIQSKI 255
>gi|4115774|dbj|BAA36517| (AB016070) paramyosin [Mytilus galloprovincialis]
Length = 864
Score = 34.8 bits (78), Expect = 0.84
Identities = 31/130 (23%), Positives = 64/130 (48%), Gaps = 3/130 (2%)
Query: 436 CSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKN 257
C NL++ES+ L+ Q+ +++ + + YE E + + L+ L +L
Sbjct: 237 CDDLKRNLDDESRQRQNLQVQLAAIQSDYDNLNARYEEE-----SENASSLRAQLSSLSA 291
Query: 256 ELIPLEESYNEE-KKNITELKNLKQKLEKYNKKLAD-AEKVRDHYTALE-IKHEILPHIH 86
L+ Y++E EL+ ++++L ++L D E++R LE K+++ I
Sbjct: 292 TYAALKTKYDKELMAKQEELEEIRRRLSIKIQELEDTCEQLRTRCNTLEKTKNKLTVEIR 351
Query: 85 KKISELESIKAVV 47
+ ELE+ + +V
Sbjct: 352 EITIELENTQIIV 364
>gi|107143|pir||A30220 myosin heavy chain, perinatal skeletal muscle - human (fragment)
>gi|34864|emb|CAA68757| (Y00821) myosin heavy chain
(1078 AA) [Homo sapiens]
Length = 1078
Score = 34.8 bits (78), Expect = 0.84
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E KA++ +++
Sbjct: 95 KKDIDDLELTLAKVEKQKHATENKVKNLTEE---MAGLDETIAKLSKEKKALQETHQQTL 151
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA---- 155
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE + KLA
Sbjct: 152 DDLQAEEDKVNILTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEG-DLKLAQEST 210
Query: 154 -DAEKVRDHY-TALEIKHEILPHIHKKISELESIKAVVTSKDIAEIISRLTRI 2
D E + LE K + ++ KI + ++++ + K I E+ +R+ +
Sbjct: 211 MDMENDKQQLDEKLEKKEFEISNLISKIEDEQAVE-IQLQKKIKELQARIEEL 262
>gi|2462783 (U73162) M-protein [Streptococcus equi]
Length = 534
Score = 34.8 bits (78), Expect = 0.84
Identities = 39/119 (32%), Positives = 59/119 (48%), Gaps = 14/119 (11%)
Query: 364 VELEIKAIEIDYE--REKTDILAARINDLKIHLENLKNELIPLEESYN--------EEKK 215
+E ++ AI+ E RE+ L + + L K+E L ES+N E K
Sbjct: 148 LEAKLAAIKSQQEMLRERDSQLRNLEKEKEQELTKAKDERQALTESFNKTLSRSTKEYNK 207
Query: 214 NITELKNLKQKLEKYNKKLAD----AEKVRDHYTALEIKHEILPHIHKKISELESIKAVV 47
TEL K+K K K+LAD AE RD A + ++ + +E KA
Sbjct: 208 LKTELAKEKEKAAKMTKELADKLSNAEASRD--KAFAVSKDLADKLSS--AEASRDKAFA 263
Query: 46 TSKDIAEIISRLT 8
SKD+A+ ++ T
Sbjct: 264 VSKDLADKLAAKT 276
>gi|3041729|sp|Q03410|SCP1_RAT SYNAPTONEMAL COMPLEX PROTEIN 1 (SCP-1 PROTEIN)
Length = 997
Score = 34.8 bits (78), Expect = 0.84
Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 26/268 (9%)
Query: 835 QIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASGKIKCIGATTFYEYRKYIE 656
Q E++ S+ +E N + N+LK + A K T+ YEY + E
Sbjct: 153 QFENEKVSLKLEEEIQENKDLIKENNATRHWCNLLKETCARSAEK----TSKYEYERE-E 207
Query: 655 NDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKISDDALVFAVKSSKKYISNR 476
Q + N+ + ++ ++ R E H +K + + + +K ++N+
Sbjct: 208 TRQVYVD--LNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYQKEVNNK 265
Query: 475 RLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSV--ELEIKAIEIDYE----REKT 314
+++ L+ S EN+ + +T L E+ +LE K D EK
Sbjct: 266 E-NQVSLLLIQST------EKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELNEKK 318
Query: 313 DILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ-KLEKYNKKLAD----- 152
D L + + D+K+ ++ + LEE K I +L K+ ++E+ NK
Sbjct: 319 DHLTSELEDIKMSMQRSMSTQKTLEEDLQIATKTIYQLTEEKEAQMEELNKAKTTHSLVV 378
Query: 151 ----------AEKVRDHYTALEIKHE----ILPHIHKKISELESIKAVVTSKDI 32
E +R LE + I + KK SELE + +K++
Sbjct: 379 TELKATTCTLEELLRTEQQRLENNEDQLKLITMELQKKSSELEEMTKFKNNKEV 432
Score = 31.7 bits (70), Expect = 7.3
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 13/103 (12%)
Query: 355 EIKAIEIDYEREKTD----ILAARINDLKIHLENL---------KNELIPLEESYNEEKK 215
E A I+YE K + IL + N+LK +EN +N+ + + S ++
Sbjct: 599 EENARSIEYEVLKKEKQMKILENKCNNLKKQIENKSKNIEELHQENKALKKKSSAENKQL 658
Query: 214 NITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVV 47
N E+K K +LE + K E + ++ +EIK K + E+E KA V
Sbjct: 659 NAYEIKVNKLELELASTKQKFEEMINNYQKEIEIKK---ISEEKLLGEVEKAKATV 711
>gi|127766|sp|P13538|MYSS_CHICK MYOSIN HEAVY CHAIN, SKELETAL MUSCLE, ADULT >gi|86355|pir||JX0178
myosin heavy chain, fast skeletal muscle, adult - chicken
>gi|238274|bbs|62843 myosin heavy chain [chickens,
skeletal muscle, Peptide, 1938 aa]
Length = 1938
Score = 34.8 bits (78), Expect = 0.84
Identities = 37/150 (24%), Positives = 69/150 (45%), Gaps = 3/150 (2%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + +L E + + E KA++ +++
Sbjct: 953 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MAVLDETIAKLTKEKKALQEAHQQTL 1009
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEK 143
D+ ++N L L+ ++ LE S +EKK +L+ K+KLE D +
Sbjct: 1010 DDLQVEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLE------GDLKL 1063
Query: 142 VRDHYTALE-IKHEILPHIHKKISELESIKAVV 47
D LE K ++ + KK E+ I++ +
Sbjct: 1064 AHDSIMDLENDKQQLDEKLKKKDFEISQIQSKI 1096
Score = 33.2 bits (74), Expect = 2.5
Identities = 43/162 (26%), Positives = 78/162 (47%), Gaps = 8/162 (4%)
Query: 511 AVKSSKKYISNRRLPDIAIDLVDS--ACSSAIVNLENESQPVTMLKEQMWSVELEIKAIE 338
+++ +K+ + N + D+ +D+ S AC++ +N + + K++ + E++A +
Sbjct: 1415 SLEKTKQRLQNE-VEDLMVDVERSNAACAALDKKQKNFDKILAEWKQKYEETQTELEASQ 1473
Query: 337 IDYEREKTDILAAR--INDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNK 164
+ T++ + + HLE LK E L++ + + I E +LEK K
Sbjct: 1474 KESRSLSTELFKMKNAYEESLDHLETLKRENKNLQQEIADLTEQIAEGGKAVHELEKV-K 1532
Query: 163 KLADAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSKDIAE 26
K + EK + ALE L H KI EL IK+ + K IAE
Sbjct: 1533 KHVEQEK-SELQAALEEAEASLEHEEGKILRLQLELNQIKSEIDRK-IAE 1580
>gi|4505301|oth|NP_002463|PMYH8 myosin, heavy polypeptide 8, skeletal muscle, perinatal >gi|189034
(M36769) perinatal myosin heavy chain [Homo sapiens]
Length = 1937
Score = 34.8 bits (78), Expect = 0.84
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E KA++ +++
Sbjct: 954 KKDIDDLELTLAKVEKQKHATENKVKNLTEE---MAGLDETIAKLSKEKKALQETHQQTL 1010
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA---- 155
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE + KLA
Sbjct: 1011 DDLQAEEDKVNILTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEG-DLKLAQEST 1069
Query: 154 -DAEKVRDHY-TALEIKHEILPHIHKKISELESIKAVVTSKDIAEIISRLTRI 2
D E + LE K + ++ KI + ++++ + K I E+ +R+ +
Sbjct: 1070 MDMENDKQQLDEKLEKKEFEISNLISKIEDEQAVE-IQLQKKIKELQARIEEL 1121
>gi|2119300|pir||I38055 myosin - human >gi|558669|emb|CAA86293| (Z38133) Myosin [Homo
sapiens]
Length = 1937
Score = 34.8 bits (78), Expect = 0.84
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E KA++ +++
Sbjct: 954 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MAGLDETIAKLSKEKKALQETHQQTL 1010
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA---- 155
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE + KLA
Sbjct: 1011 DDLQAEEDKVNILTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEG-DLKLAQEST 1069
Query: 154 -DAEKVRDHY-TALEIKHEILPHIHKKISELESIKAVVTSKDIAEIISRLTRI 2
D E + LE K + ++ KI + ++++ + K I E+ +R+ +
Sbjct: 1070 MDMENDKQQLDEKLEKKEFEISNLISKIEDEQAVE-IQLQKKIKELQARIEEL 1121
>gi|3041707|sp|P13535|MYSP_HUMAN MYOSIN HEAVY CHAIN, PERINATAL SKELETAL MUSCLE
Length = 1937
Score = 34.8 bits (78), Expect = 0.84
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E KA++ +++
Sbjct: 954 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MAGLDETIAKLSKEKKALQETHQQTL 1010
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA---- 155
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE + KLA
Sbjct: 1011 DDLQAEEDKVNILTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEG-DLKLAQEST 1069
Query: 154 -DAEKVRDHY-TALEIKHEILPHIHKKISELESIKAVVTSKDIAEIISRLTRI 2
D E + LE K + ++ KI + ++++ + K I E+ +R+ +
Sbjct: 1070 MDMENDKQQLDEKLEKKEFEISNLISKIEDEQAVE-IQLQKKIKELQARIEEL 1121
>gi|107133|pir||S12460 myosin beta heavy chain, skeletal muscle, embryonic (clone gtMHC-E)
- human (fragment) >gi|29464|emb|CAA35942| (X51593)
embryonic myosin heavy chain (1085 AA) [Homo sapiens]
Length = 1085
Score = 34.8 bits (78), Expect = 0.84
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E ++ L E + + E KA++ +++
Sbjct: 97 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---LSGLDETIAKLTREKKALQEAHQQAL 153
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 154 DDLQAEEDKVNSLNKTKSKLEQQVEDLESSLEQEKKLRVDLERNKRKLE 202
>gi|88201|pir||S04090 myosin heavy chain, skeletal muscle, embryonic - human
>gi|34844|emb|CAA32167| (X13988) embryonic myosin heavy
chain (AA 1 - 1940) [Homo sapiens]
Length = 1940
Score = 34.8 bits (78), Expect = 0.84
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E ++ L E + + E KA++ +++
Sbjct: 952 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---LSGLDETIAKLTREKKALQEAHQQAL 1008
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 1009 DDLQAEEDKVNSLNKTKSKLEQQVEDLESSLEQEKKLRVDLERNKRKLE 1057
>gi|1335313|emb|CAA33731| (X15696) translated region (partial) [Homo sapiens]
Length = 1085
Score = 34.8 bits (78), Expect = 0.84
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E ++ L E + + E KA++ +++
Sbjct: 97 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---LSGLDETIAKLTREKKALQEAHQQAL 153
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 154 DDLQAEEDKVNSLNKTKSKLEQQVEDLESSLEQEKKLRVDLERNKRKLE 202
>gi|2909471|emb|CAA17357| (AL021930) hypothetical protein Rv0282 [Mycobacterium tuberculosis]
Length = 631
Score = 34.8 bits (78), Expect = 0.84
Identities = 25/107 (23%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 880 QYRGQFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASGKIK 701
Q+ G+ E + ++ I+S +LF+DE + +V+ GA N+ L + L + + + +
Sbjct: 424 QHIGETEAKTNAI---IDSALDGVLFLDEAYALVATGAKNDFGLVAIDTLLARMENDRDR 480
Query: 700 CIGATTFY--EYRKYIENDQALARRFVK-INVPEPTISDGITILRGLRER 560
+ Y + K+++ ++ L RF + I+ P T + + I + E+
Sbjct: 481 LVVIIAGYRADLDKFLDTNEGLRSRFTRNIDFPSYTSHELVEIAHKMAEQ 530
>gi|3043372|sp|P11055|MYSE_HUMAN MYOSIN HEAVY CHAIN, FAST SKELETAL MUSCLE, EMBRYONIC (MUSCLE EMBRYONIC
MYOSIN HEAVY CHAIN) (SMHCE)
Length = 1940
Score = 34.8 bits (78), Expect = 0.84
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E ++ L E + + E KA++ +++
Sbjct: 952 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---LSGLDETIAKLTREKKALQEAHQQAL 1008
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 1009 DDLQAEEDKVNSLNKTKSKLEQQVEDLESSLEQEKKLRVDLERNKRKLE 1057
>gi|2429350|gb|AAB70921| (AF019972) NE-rich protein [Plasmodium chabaudi chabaudi]
Length = 556
Score = 34.4 bits (77), Expect = 1.1
Identities = 29/82 (35%), Positives = 55/82 (66%), Gaps = 25/82 (30%)
Query: 295 INDLKIHLEN--LKNELIPLE-----------ESYN-------EEKKNITE-----LKNL 191
+N++ IHL++ LK E+I L + YN +EKK+I + L N
Sbjct: 412 LNNISIHLDDAILKYEVIQLNYGKTKKAIDALKKYNSKLMKKIDEKKSILDKQSSVLDNK 471
Query: 190 KQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAV 50
+K+E+ N+KL + + + D+ + + + E++ K+ EL+ I+ V
Sbjct: 472 NKKMEELNQKLNNLKLLYDNGSTRKHEIELIKIYKSKLEELKKIEIV 518
>gi|104776|pir||S24348 myosin heavy chain, embryonic and adult skeletal muscle (clone
Cemb2) - chicken (fragment)
Length = 955
Score = 34.4 bits (77), Expect = 1.1
Identities = 39/162 (24%), Positives = 79/162 (48%), Gaps = 8/162 (4%)
Query: 511 AVKSSKKYISNRRLPDIAIDL--VDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIE 338
+++ +K+ + N + D+ ID+ ++AC+ +N + + K++ + E++A +
Sbjct: 432 SLEKTKQRLQNE-VEDLMIDVERANAACARLDKKQKNFDKILAEWKQKYEETQAELEASQ 490
Query: 337 IDYEREKTDILAAR--INDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNK 164
+ T++ + + HLE LK E L++ ++ + I E +LEK K
Sbjct: 491 KESRSLSTELFKMKNAYEESLDHLETLKRENKNLQQEISDLTEQIAEGGKAIHELEKVKK 550
Query: 163 KLADAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSKDIAE 26
++ ++ + ALE L H KI EL +K+ + K IAE
Sbjct: 551 QI--EQEKSEIQAALEEAEASLEHEEGKILRLQLELNQVKSEIDRK-IAE 597
Score = 31.3 bits (69), Expect = 9.5
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 385 LKEQMWSVELEIKAIEIDYEREKTDILAA--RINDLKIHLENLKNELIPLEESYNEEKKN 212
L E + + E KA++ +++ D+ A ++N L L+ ++ LE S +EKK
Sbjct: 4 LDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKL 63
Query: 211 ITELKNLKQKLEKYNKKLADAEKVRDHYTALE-IKHEILPHIHKKISELESIKAVV 47
+L+ K+KLE D + +D LE K ++ + KK E+ I++ +
Sbjct: 64 RMDLERAKRKLE------GDLKMSQDTIMDLENDKQQLDEKLKKKDFEISQIQSKI 113
>gi|4503179|oth|NP_003602|PCXORF5 gene encoding a protein with coiled-coil alpha-helical domains
>gi|3451166|emb|CAA75436| (Y15164) Cxorf5 (71-7A)
protein [Homo sapiens]
Length = 1012
Score = 34.4 bits (77), Expect = 1.1
Identities = 40/152 (26%), Positives = 74/152 (48%), Gaps = 21/152 (13%)
Query: 559 FEAHHGVKISDDALVFAVKSSKKYI--SNRRLPDIAIDLVDSACSSAIVNLENESQPVTM 386
FE + K+ ++ L + ++ YI +NR + D + V+L+ E +
Sbjct: 338 FEETYDRKLKNELLKYQLELKDDYIIRTNRLIED------ERKNKEKAVHLQEELIAINS 391
Query: 385 LKEQMWSVELEIKAIEIDYEREKTDILAA---------RINDLKIH--LENLKNELIP-- 245
KE++ +K +E++ E K LA ++ ++ + L+ K EL+
Sbjct: 392 KKEELNQSVNRVKELELELESVKAQSLAITKQNHMLNEKVKEMSDYSLLKEEKLELLAQN 451
Query: 244 ------LEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHE 104
LEES NE + + L +L + K+L AEK A+ ++HE
Sbjct: 452 KLLKQQLEESRNENLRLLNRLAQPAPELAVFQKELRKAEK------AIVVEHE 498
>gi|348307|pir||A45623 AnTat 11.17 variant surface glycoprotein - Trypanosoma brucei
gambiense >gi|162469 (M62629) variant surface
glycoprotein [Trypanosoma gambiense]
Length = 490
Score = 34.4 bits (77), Expect = 1.1
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 26/161 (16%)
Query: 655 NDQALARRFVKINVPEPTISDGITILRGLRER------FEAHHGVKISDDALVFAVKSSK 494
N LA +K+ PT +D ++ L +++ + A+ + D L + S+
Sbjct: 226 NGLLLAGGLLKLGATTPTFAD-LSQLNSKKDKPDIQTMYRAYTSTTETADDLATGLPSTP 284
Query: 493 KYISNRRLPDIAID--------LVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIE 338
+ ++ + L A+ L + ++AI NL + P L+ Q+WS + IKA
Sbjct: 285 EQLAKKPLFAAALSKITASKKPLTGNELTTAITNLYGK--PTEDLQTQLWSKMINIKA-P 341
Query: 337 IDYEREKTDILAARINDLKIHLENLKNELIPLEESY------------NEEKKNITELKN 194
D+ E IND+ + LE L N + S E+ N+ E+K
Sbjct: 342 ADHSSEDKGKPLTDINDIDLLLEMLVNATVDAASSQAASDRSQCSAPTTEQSINVDEIKE 401
Query: 193 LKQKLEK 173
+ +K
Sbjct: 402 KECNTKK 408
>gi|1041785 (U36927) rhoptry protein [Plasmodium yoelii]
Length = 2401
Score = 34.4 bits (77), Expect = 1.1
Identities = 29/121 (23%), Positives = 66/121 (53%), Gaps = 9/121 (7%)
Query: 364 VELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ 185
+E +I + ID + K +N L+ LE+LKN+ +E+ E + +++KN++
Sbjct: 1261 IETKISNLSIDTQETKLIENKNILNTLEKLLESLKNQKKNIEDQKKELDEVNSKIKNIES 1320
Query: 184 KLEKYNK--KLADAEKVRDHYTALEIKHE-----ILPHIHKKISELES--IKAVVTSKDI 32
+ ++ K ++ EK+ + A + + E I+P I IS ++ ++ + T+K++
Sbjct: 1321 NVNQHKKNYEIGIVEKINEIAKANKDQIESTQKLIIPTIKNLISPFKANDLEGIDTNKNL 1380
Query: 31 AEIISRLTRI 2
+ + + I
Sbjct: 1381 GKYNTEMNNI 1390
Score = 31.7 bits (70), Expect = 7.3
Identities = 29/121 (23%), Positives = 56/121 (45%), Gaps = 1/121 (0%)
Query: 364 VELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ 185
++ E++ ++ + TDI N +EN+ N L N+ KK I ++K
Sbjct: 955 IKKELEKNVLESQNNNTDI-----NQYLSKIENIYNIL-----KLNKIKKIIDKVKEYTD 1004
Query: 184 KLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES-IKAVVTSKDIAEIISRLT 8
++EK NKK+ +AE ++K + + E +S IK+ + ++E I +T
Sbjct: 1005 EIEKNNKKI-NAELSNSEKIITQLKE------NSSLKECQSKIKSTIDDNYVSECIKNIT 1057
Query: 7 RI 2
+
Sbjct: 1058 NL 1059
>gi|467604|emb|CAA37135| (X52962) merozoite surface protein 1 [Plasmodium falciparum]
Length = 336
Score = 34.4 bits (77), Expect = 1.1
Identities = 33/119 (27%), Positives = 60/119 (49%), Gaps = 7/119 (5%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKK---NITELKNLK 188
L+I+A E+D +L + + L+N+K+ + +E+ + KK NI EL
Sbjct: 175 LKIRANELD-------VLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKKTIENINELIEGS 227
Query: 187 QKLEKYNKKLADAEKVRDHYTA---LEIKHEILPHIHKKISELES-IKAVVTSKDIAEII 20
+K NK E+ + Y A L I ++ L H IS LE I + +++I +++
Sbjct: 228 KKTIDKNKNATKEEEKKKLYQAQYDLSIYNKQLEEAHNLISVLEKRIDTLKKNENIKKLL 287
Query: 19 SRLTRI 2
++ I
Sbjct: 288 DKINEI 293
>gi|125415|sp|P21613|KINH_LOLPE KINESIN HEAVY CHAIN >gi|102714|pir||A35075 kinesin heavy chain -
longfin squid >gi|161290 (J05258) kinesin heavy chain
[Loligo pealii]
Length = 967
Score = 34.4 bits (77), Expect = 1.1
Identities = 27/116 (23%), Positives = 57/116 (48%), Gaps = 3/116 (2%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDI--LAARINDLKIHLENLKNELIPL 242
+ N+SQ + LKEQM E I DYE + D+ + A K ++ + L L
Sbjct: 433 INNQSQLIEKLKEQMMEQEDLIAQSRRDYENLQQDMSRIQADNESAKDEVKEVLQALEEL 492
Query: 241 EESYNEEKKNITELKNLKQKL-EKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISEL 68
+Y+++ + + + + L E+ N+KL+ +++ L+ + H K+++++
Sbjct: 493 AMNYDQKSQEVEDKNKENENLSEELNQKLSTLNSLQNELDQLK---DSSMHHRKRVTDM 548
>gi|127771|sp||MYSS_RABIT_1 [Segment 1 of 2] MYOSIN HEAVY CHAIN, SKELETAL MUSCLE
>gi|90097|pir||A02985 myosin heavy chain, skeletal
muscle - rabbit (fragment)
Length = 258
Score = 34.4 bits (77), Expect = 1.1
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E KA++ +++
Sbjct: 109 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MAGLDETIAKLTKEKKALQEAHQQTL 165
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA---- 155
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE + KLA
Sbjct: 166 DDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKIRMDLERAKRKLEG-DLKLAQETS 224
Query: 154 -DAEKVRDHYTALEIKHEILPHIHKKISELESI 59
D E + K E + ++ KI + +++
Sbjct: 225 MDIENDKQQLDEKLKKLEFMTNLQSKIEDEQAL 257
>gi|2351219|dbj|BAA22067| (D89990) myosin heavy chain [Cyprinus carpio]
Length = 1933
Score = 34.4 bits (77), Expect = 1.1
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 21/145 (14%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + E + + E KA++ +++
Sbjct: 950 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MASQDESIAKLTKEKKALQEAHQQTL 1006
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE----------- 176
D+ A ++N L L+ ++ LE S +EKK +L+ +K+KLE
Sbjct: 1007 DDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERVKRKLEGDLKLAQESIM 1066
Query: 175 -KYNKKLADAEKVR-------DHYTALEIKHEILPHIHKKISELES 62
N+K EK++ + +E + + + KKI EL++
Sbjct: 1067 DLENEKQQSDEKIKKKDFEISQFLSKIEDEQSLGAQLQKKIKELQA 1112
Score = 32.8 bits (73), Expect = 3.2
Identities = 30/117 (25%), Positives = 59/117 (49%), Gaps = 6/117 (5%)
Query: 412 ENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEES 233
E ES + K+Q+ +E + +E + E E+ R D + + + L
Sbjct: 1798 EAESLAMKGGKKQLQKLESRVHELEAEVEAEQR-----RGADAVKGVRKYERRVKELTYQ 1852
Query: 232 YNEEKKNITELK----NLKQKLEKYNKKLADAEKVRDHYTA--LEIKHEILPHIHKKISE 71
E+KKN+T L+ NL+ K++ Y ++ +AE+ + + + +++HE L H++
Sbjct: 1853 TEEDKKNVTRLQDLVDNLQLKVKAYKRQAEEAEEQANTHLSRYRKVQHE-LEESHERADI 1911
Query: 70 LES 62
ES
Sbjct: 1912 AES 1914
Score = 32.1 bits (71), Expect = 5.6
Identities = 31/111 (27%), Positives = 54/111 (47%), Gaps = 11/111 (9%)
Query: 370 WSVELEIKAIEIDYEREKTDILAARINDLKI-------HLENLKNELIPLEESYNEEKKN 212
W + E E++ +++ L+ + +K HLE LK E L++ ++ +
Sbjct: 1455 WKQKYEESQAELEAAQKEARSLSTELFKMKNSYEEALDHLETLKRENKNLQQEISDLSEQ 1514
Query: 211 ITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVT 44
+ E ++EK KK ++EK + TALE L H KI EL +K+ +
Sbjct: 1515 LGETGKSIHEIEK-AKKTVESEKA-EIQTALEEAEGTLEHEESKILRVQLELNQVKSEID 1572
Query: 43 SK 38
K
Sbjct: 1573 RK 1574
>gi|1168461|sp|P21249|ANT1_ONCVO MAJOR ANTIGEN >gi|530825 (U12681) OVT1 [Onchocerca volvulus]
Length = 2022
Score = 34.4 bits (77), Expect = 1.1
Identities = 44/196 (22%), Positives = 81/196 (40%), Gaps = 4/196 (2%)
Query: 739 NMLKPSLASGKIKCIGATT----FYEYRKYIENDQALARRFVKINVPEPTISDGITILRG 572
N+L+ L + +++ TT E R+ +E A A R TI
Sbjct: 426 NVLQRKLKNAEVQISELTTKNDSLEEIRRRLEKRIAEANR---------------TITHR 470
Query: 571 LRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPV 392
RE +A H VK +D L + S R + I + +S ++++E +
Sbjct: 471 QRELDDAKHTVKDLEDRLKSLEQEKASIDSARHHLEDEIRKMREQFNSTLLDVERRAAED 530
Query: 391 TMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKN 212
E++ ++ E K I I + ++L LK + +KN + +E+ YN +
Sbjct: 531 A--DERIRKIDEETK-IRISELTNRIEMLLEENKRLKDENDGMKNRIQDIEKEYNTIIRK 587
Query: 211 ITELKNLKQKLEKYNKKLAD 152
+ E N + LE ++L +
Sbjct: 588 LEEKDNALKNLENTRQRLVN 607
>gi|806513|dbj|BAA09068| (D50475) myosin heavy chain [Cyprinus carpio]
Length = 1092
Score = 34.4 bits (77), Expect = 1.1
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 21/145 (14%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + E + + E KA++ +++
Sbjct: 110 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MACQDESIAKLTKEKKALQEAHQQTL 166
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE----------- 176
D+ A ++N L L+ ++ LE S +EKK +L+ +K+KLE
Sbjct: 167 DDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERVKRKLEGDLKLAQESIM 226
Query: 175 -KYNKKLADAEKVR-------DHYTALEIKHEILPHIHKKISELES 62
N+K EK++ + +E + + + KKI EL++
Sbjct: 227 DLENEKQQSDEKIKKKDFEISQFLSKIEDEQSLGAQLQKKIKELQA 272
Score = 33.6 bits (75), Expect = 1.9
Identities = 27/80 (33%), Positives = 41/80 (50%), Gaps = 4/80 (5%)
Query: 277 HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEIL 98
HLE LK E L++ ++ + + E +LEK KK+ ++EK + TALE L
Sbjct: 653 HLETLKRENKNLQQEISDLSEQLGETGKSIHELEK-AKKIVESEKA-EIQTALEEAESTL 710
Query: 97 PHIHKKI----SELESIKAVVTSK 38
H KI EL +K+ + K
Sbjct: 711 EHEESKILRVQLELNQVKSEIDRK 734
>gi|4502781|oth|NP_001804|PCENPE centromere protein E (312kD) >gi|399227|sp|Q02224|CENE_HUMAN
CENTROMERIC PROTEIN E (CENP-E PROTEIN)
>gi|284038|pir||S28261 centromere protein E - human
>gi|29865|emb|CAA78727| (Z15005) CENP-E [Homo sapiens]
Length = 2663
Score = 34.4 bits (77), Expect = 1.1
Identities = 32/109 (29%), Positives = 54/109 (49%)
Query: 424 IVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIP 245
IVNL E+Q + EL K E+ +EKT + R+N+++ E L+N P
Sbjct: 847 IVNLSKEAQKFDSSLGAL-KTELSYKTQEL---QEKTREVQERLNEMEQLKEQLENRDSP 902
Query: 244 LEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEIL 98
L ++ EK ITE L+Q LE+ + + ++ +L+I+ + L
Sbjct: 903 L-QTVEREKTLITE--KLQQTLEEVKTLTQEKDDLKQLQESLQIERDQL 948
Score = 33.2 bits (74), Expect = 2.5
Identities = 25/118 (21%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 385 LKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNIT 206
L++ + SV E + ++ D +E ++ +L++ + LK + + + N K
Sbjct: 1055 LQQMLESVIAEKEQLKTDL-KENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEG 1113
Query: 205 ELKNLKQKLEKYNKKLAD-AEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDI 32
EL +L + +KL + ++++++ L E + + KKI+E+E++K + +K++
Sbjct: 1114 ELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKEL 1172
Score = 32.5 bits (72), Expect = 4.2
Identities = 30/121 (24%), Positives = 62/121 (50%), Gaps = 1/121 (0%)
Query: 418 NLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLE 239
NL + + + ++Q+ E KA +++ ++E + AR+ K H E + L
Sbjct: 1893 NLRRVEETLKLERDQLKESLQETKARDLEIQQE---LKTARMLS-KEHKETVDK----LR 1944
Query: 238 ESYNEEKKNITEL-KNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES 62
E +E+ I+++ K+L + ++ KK+ + +K L +K ++ HKKI+E+E
Sbjct: 1945 EKISEKTIQISDIQKDLDKSKDELQKKIQELQK--KELQLLRVKEDVNMS-HKKINEMEQ 2001
Query: 61 IK 56
+K
Sbjct: 2002 LK 2003
Score = 32.1 bits (71), Expect = 5.6
Identities = 35/123 (28%), Positives = 68/123 (54%), Gaps = 19/123 (15%)
Query: 385 LKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEE----- 221
LKE+ S +L+ K ++ +E+ + +IN+++ LKN+ + LE E
Sbjct: 1129 LKEK--SQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQ 1186
Query: 220 --KKNITELKNLKQKLEKYNKKLADAEKVRDHY---------TALEIKHEI-LPHIHKKI 77
+N E+K++ ++ + + E RDH T L+ K E+ + HIH K
Sbjct: 1187 KLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKE 1246
Query: 76 SE--LESIKAVVTSKDIAEIIS 17
+ ++ ++ V+ K A+II+
Sbjct: 1247 HQETIDELRRSVSEK-TAQIIN 1267
>gi|127755|sp|P12847|MYSE_RAT MYOSIN HEAVY CHAIN, FAST SKELETAL MUSCLE, EMBRYONIC
>gi|92509|pir||A24922 myosin heavy chain, skeletal
muscle, embryonic - rat >gi|1619328|emb|CAA27817|
(X04267) myosin heavy chain [Rattus norvegicus]
Length = 1940
Score = 34.4 bits (77), Expect = 1.1
Identities = 41/145 (28%), Positives = 74/145 (50%), Gaps = 21/145 (14%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E KA++ +++
Sbjct: 952 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---LAGLDETIAKLTREKKALQEAHQQTL 1008
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK------------- 182
D+ A ++N L L+ ++ LE S +EKK +L+ K+K
Sbjct: 1009 DDLQAEEDKVNSLSKLKSKLEQQVDDLESSLEQEKKLRVDLERNKRKLEGDLKLAQESIL 1068
Query: 181 -LEKYNKKLADAEKVRD-HYTALEIKHE----ILPHIHKKISELES 62
LE ++L + K +D Y+ L+ K E + + KKI EL++
Sbjct: 1069 DLENDKQQLDERLKKKDFEYSQLQSKVEDEQTLSLQLQKKIKELQA 1114
>gi|940233 (U32574) myosin heavy chain [Oryctolagus cuniculus]
Length = 1938
Score = 34.4 bits (77), Expect = 1.1
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E KA++ +++
Sbjct: 954 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MAGLDETIAKLTKEKKALQEAHQQTL 1010
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA---- 155
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE + KLA
Sbjct: 1011 DDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKIRMDLERAKRKLEG-DLKLAQEST 1069
Query: 154 -DAEKVRDHY-TALEIKHEILPHIHKKISELESIKAVVTSKDIAEIISRLTRI 2
D E + L+ K + ++ KI + E A+ K I E+ +R+ +
Sbjct: 1070 MDIENDKQQLDEKLKKKEFEMSNLQSKIED-EQALAMQLQKKIKELQARIEEL 1121
>gi|2827450 (AF043493) KS5 protein [Gallus gallus]
Length = 719
Score = 34.4 bits (77), Expect = 1.1
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 439 ACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK----------TDILAARIN 290
A + A VN E V ++ W + ++ +EK L +N
Sbjct: 180 AVTVAEVNQLKEKLEVVEAEKNEWKLNRAQLQQNLEESKEKIKKLETYWLEAQSLCETVN 239
Query: 289 DLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKV---RDHYTAL 119
+ HL+ + + LE+ YN+ KK LK+ +QK ++ KK D +V RD A
Sbjct: 240 E---HLKETQEQCDALEKKYNKAKK---LLKDYQQKEIEFMKKEEDHSRVLEERDQKYAE 293
Query: 118 EIKHEILPHIHKKISELESIKAVVTSK 38
++K +KISELES K +V K
Sbjct: 294 QLK-----MYQEKISELES-KLIVYEK 314
>gi|729915|sp|Q03427|LAMC_DROME LAMIN C (PG-IF) >gi|157808 (L07933) lamin C like protein
[Drosophila melanogaster]
Length = 621
Score = 34.4 bits (77), Expect = 1.1
Identities = 34/107 (31%), Positives = 54/107 (49%), Gaps = 15/107 (14%)
Query: 418 NLENESQPVTM-LKEQMWSVELEIKAIEIDYEREKT------DILAARINDLKIHLENLK 260
NLENE+ +T L +V E ++ YE+E D A L+I ++ L
Sbjct: 66 NLENENSRLTQELNLAQDTVNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDIKRLW 125
Query: 259 NELIPLEESYNEEKKNITELKNLKQKLE--------KYNKKLADAEKVRDHYTALEIKHE 104
E L+ +++ K T +N + E KYN+ LAD +K D L +++E
Sbjct: 126 EENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQSLADRKKFEDQAKELALENE 185
Query: 103 IL 98
L
Sbjct: 186 RL 187
>gi|806511|dbj|BAA09067| (D50474) myosin heavy chain [Cyprinus carpio]
Length = 1196
Score = 34.4 bits (77), Expect = 1.1
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 21/145 (14%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + E + + E KA++ +++
Sbjct: 213 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MASQDESIAKLTKEKKALQEAHQQTL 269
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE----------- 176
D+ A ++N L L+ ++ LE S +EKK +L+ +K+KLE
Sbjct: 270 DDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERVKRKLEGDLKLAQESIM 329
Query: 175 -KYNKKLADAEKVR-------DHYTALEIKHEILPHIHKKISELES 62
N+K EK++ + +E + + + KKI EL++
Sbjct: 330 DLENEKQQSDEKIKKKDFEISQFLSKIEDEQSLGAQLQKKIKELQA 375
Score = 32.8 bits (73), Expect = 3.2
Identities = 30/117 (25%), Positives = 59/117 (49%), Gaps = 6/117 (5%)
Query: 412 ENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEES 233
E ES + K+Q+ +E + +E + E E+ R D + + + L
Sbjct: 1061 EAESLAMKGGKKQLQKLESRVHELEAEVEAEQR-----RGADAVKGVRKYERRVKELTYQ 1115
Query: 232 YNEEKKNITELK----NLKQKLEKYNKKLADAEKVRDHYTA--LEIKHEILPHIHKKISE 71
E+KKN+T L+ NL+ K++ Y ++ +AE+ + + + +++HE L H++
Sbjct: 1116 TEEDKKNVTRLQDLVDNLQLKVKAYKRQAEEAEEQANTHLSRYRKVQHE-LEESHERADI 1174
Query: 70 LES 62
ES
Sbjct: 1175 AES 1177
Score = 32.1 bits (71), Expect = 5.6
Identities = 31/111 (27%), Positives = 54/111 (47%), Gaps = 11/111 (9%)
Query: 370 WSVELEIKAIEIDYEREKTDILAARINDLKI-------HLENLKNELIPLEESYNEEKKN 212
W + E E++ +++ L+ + +K HLE LK E L++ ++ +
Sbjct: 718 WKQKYEESQAELEAAQKEARSLSTELFKMKNSYEEALDHLETLKRENKNLQQEISDLSEQ 777
Query: 211 ITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVT 44
+ E ++EK KK ++EK + TALE L H KI EL +K+ +
Sbjct: 778 LGETGKSIHEIEK-AKKTVESEKA-EIQTALEEAEGTLEHEESKILRVQLELNQVKSEID 835
Query: 43 SK 38
K
Sbjct: 836 RK 837
>gi|3834611 (AF093260) homer-2b [Mus musculus]
Length = 354
Score = 34.0 bits (76), Expect = 1.4
Identities = 33/108 (30%), Positives = 54/108 (49%), Gaps = 3/108 (2%)
Query: 361 ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK 182
ELE + EI+ E+EK L RI +L+ + + + EL L + + ++E + + +K
Sbjct: 231 ELEEQCSEINREKEKNTQLKRRIEELESEVRDKEMELKDLRKQSEIIPQLMSECEYVSEK 290
Query: 181 L---EKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSK 38
L E+ N+ L D KVR T +E H+ EL+S V+ K
Sbjct: 291 LEAAERDNQNLED--KVRSLKTDIEESKYRQRHLK---GELKSFLEVLDGK 336
>gi|72984|pir||QQSA4E hypothetical protein C-403 - Staphylococcus aureus plasmid pE194
Length = 403
Score = 34.0 bits (76), Expect = 1.4
Identities = 22/72 (30%), Positives = 37/72 (50%)
Query: 334 DYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA 155
DYE K+ +LK E+LK + +E Y+E+ K E+ LK++ + N++L
Sbjct: 276 DYENIKSTDYYTENQELKKRRESLKEVVNTWKEGYHEKSK---EVNKLKRENDSLNEQLN 332
Query: 154 DAEKVRDHYTAL 119
+EK +D L
Sbjct: 333 VSEKFQDSTVTL 344
>gi|1216294 (L35238) non-muscle tropomyosin [Xenopus laevis]
Length = 248
Score = 34.0 bits (76), Expect = 1.4
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 340 EIDYEREKTDILAARINDLKIHLENLKNELIPLE---ESYNE-EKKNITELKNLKQKLEK 173
E++ E+ ++ + +DL+ L+N+ N L LE E Y+E E K E+K L KL++
Sbjct: 139 ELERAEERAEVSELKCSDLEEELKNVTNNLKSLEAQSEKYSEKEDKYEEEIKILTDKLKE 198
Query: 172 YNKKLADAEK-VRDHYTALE 116
+ AE+ V H A++
Sbjct: 199 AETRAEFAERTVTKHEKAID 218
>gi|2983285 (AE000702) hypothetical protein [Aquifex aeolicus]
Length = 336
Score = 34.0 bits (76), Expect = 1.4
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 286 LKIHLENLKNELIPLEESYNEEKKNITELKNLK----QKLEKYNKKLADAEKVRDHYTAL 119
+ I+ + K I L S NE ++ +TE+++ + +EKY+KK+ EK + Y+
Sbjct: 71 IDIYYKIFKEAKIDLRLS-NEIERILTEVRHTVYEYLETVEKYDKKIEKHEKTLEDYSRQ 129
Query: 118 EIKHEILPHIHKKISELESIKAVVTSK 38
E + IL I K++SEL + + +K
Sbjct: 130 E-EISILKDILKEVSELRKVNQELIAK 155
>gi|3257272|dbj|BAA29955| (AP000003) 157aa long hypothetical protein [Pyrococcus horikoshii]
Length = 157
Score = 34.0 bits (76), Expect = 1.4
Identities = 34/118 (28%), Positives = 61/118 (50%), Gaps = 4/118 (3%)
Query: 400 QPVTMLKEQMWSVELEIKAIEIDYEREK----TDILAARINDLKIHLENLKNELIPLEES 233
+ V +LKE++ SVE I+A E D + +K D + I D+ L+ L LE+
Sbjct: 28 EEVEVLKEKVKSVEKLIEAYEGDKDLDKIAMMMDKIGPMIEDILEPLQKL------LEDL 81
Query: 232 YNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKA 53
Y+ EK ++ L + + ++ K L +A D TA E+ E + I+ + LE+ +
Sbjct: 82 YSPEK-----MQALGKSVAQFYKDLVEAG--MDKETATELTKEYMKSINVMRNLLETFTS 134
Query: 52 VV 47
++
Sbjct: 135 MI 136
>gi|2688339 (AE001148) stage 0 sporulation protein J (spo0J) [Borrelia
burgdorferi]
Length = 260
Score = 34.0 bits (76), Expect = 1.4
Identities = 36/154 (23%), Positives = 74/154 (47%), Gaps = 9/154 (5%)
Query: 496 KKYISNRRLPDIAIDLVDSAC-SSAIVNLENESQPVTMLKEQMWSVEL----EIKAIEID 332
+K +S L +++I + ++ IV N+ + + + + + +L I IE+D
Sbjct: 21 RKSVSLVELEELSISIKENGILQPLIVCKANDRYKIIVGERRFRAAKLIQLTNIPVIEVD 80
Query: 331 YEREKTDILAARINDLKIHLENLKNE-LIPLEESY---NEEKKNITELKNLKQKLEKYNK 164
+ D + +EN++ E P+EE+Y N K K+L +K+ K
Sbjct: 81 IKESCKDFMPL--------VENIQRENFTPVEEAYAYKNIMNKYSLTQKDLSEKIGKSRT 132
Query: 163 KLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKD 35
+++ ++ L+++ EIL IH+K K +++ KD
Sbjct: 133 YISNLVRI------LDLEQEILNAIHRKEISFGHAKVILSLKD 169
>gi|3834609 (AF093259) homer-2a [Mus musculus] >gi|4150950|dbj|BAA37088|
(AB017136) cupidin [Mus musculus]
Length = 343
Score = 34.0 bits (76), Expect = 1.4
Identities = 33/108 (30%), Positives = 54/108 (49%), Gaps = 3/108 (2%)
Query: 361 ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK 182
ELE + EI+ E+EK L RI +L+ + + + EL L + + ++E + + +K
Sbjct: 220 ELEEQCSEINREKEKNTQLKRRIEELESEVRDKEMELKDLRKQSEIIPQLMSECEYVSEK 279
Query: 181 L---EKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSK 38
L E+ N+ L D KVR T +E H+ EL+S V+ K
Sbjct: 280 LEAAERDNQNLED--KVRSLKTDIEESKYRQRHLK---GELKSFLEVLDGK 325
>gi|1465866 (U64862) strong similarity to Onchocerca volvulus major antigen
(SP:P212249) [Caenorhabditis elegans]
Length = 2288
Score = 34.0 bits (76), Expect = 1.4
Identities = 24/101 (23%), Positives = 49/101 (47%), Gaps = 2/101 (1%)
Query: 421 VNLENESQPVTMLKEQMWSVELEIKAI--EIDYEREKTDILAARINDLKIHLENLKNELI 248
++LE+ + L++Q +++ + E+D + DIL + +++ L LKN L
Sbjct: 1272 MDLESTQNRLRSLEDQHSTLQSDANKWRGELDAALRENDILKSNNTNMETDLTRLKNRLK 1331
Query: 247 PLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTAL 119
E++ E K +++ K K++L+ + K DH L
Sbjct: 1332 SAEDALKELKNSLSHAKTEKERLQ---NAFREKTKQADHLNQL 1371
Score = 31.3 bits (69), Expect = 9.5
Identities = 23/93 (24%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 424 IVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIP 245
++N +NE K+Q+ + L +++ DY++ D+ R+++L+ L++ E
Sbjct: 1865 LLNTQNELNGANNRKQQLENELLNVRSEVRDYKQRVHDV-NNRVSELQRQLQDANTEKNR 1923
Query: 244 LEESYNEEKKNITELK----NLKQKLE--KYNKKLADAE 146
+E+ + +K + ++ +L+Q+LE K K++A E
Sbjct: 1924 VEDRFLSVEKVVNTMRTTETDLRQQLETAKNEKRVATKE 1962
>gi|127748|sp|P02564|MYSB_RAT MYOSIN HEAVY CHAIN, CARDIAC MUSCLE BETA ISOFORM >gi|92499|pir||S06006
myosin beta heavy chain, cardiac muscle - rat
>gi|56657|emb|CAA34065| (X15939) beta cardiac myosin
heavy chain (AA 1-1935) [Rattus norvegicus]
Length = 1935
Score = 34.0 bits (76), Expect = 1.4
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 493 KYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKT 314
K+ + D+ +D+ S ++A ++ + + +++ W + E E++ +++
Sbjct: 1418 KHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILVE---WKQKYEESQSELESSQKEA 1474
Query: 313 DILAARINDLKI-------HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA 155
L+ + LK HLE K E L+E ++ + + +LEK K+L
Sbjct: 1475 RSLSTELFKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGSTGKSIHELEKIRKQL- 1533
Query: 154 DAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSK 38
+AEK+ + +ALE L H KI E IKA + K
Sbjct: 1534 EAEKL-ELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1575
Score = 31.7 bits (70), Expect = 7.3
Identities = 30/121 (24%), Positives = 62/121 (50%), Gaps = 3/121 (2%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAA--RINDLKIHLENLKNELIPL 242
++N ++ + L E + + E KA++ +++ D+ A ++N L L+ ++ L
Sbjct: 975 VKNLTEEMAGLDEIIVKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQVDDL 1034
Query: 241 EESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALE-IKHEILPHIHKKISELE 65
E S +++KK +L+ K+KLE D + ++ LE K ++ + KK EL
Sbjct: 1035 EGSLDQDKKVRMDLERAKRKLE------GDLKLTQESIMDLENDKQQLDERLKKKDFELN 1088
Query: 64 SIKA 53
++ A
Sbjct: 1089 ALNA 1092
>gi|487105|pir||S39082 myosin heavy chain, embryonic - chicken (fragment)
Length = 741
Score = 34.0 bits (76), Expect = 1.4
Identities = 38/162 (23%), Positives = 80/162 (48%), Gaps = 8/162 (4%)
Query: 511 AVKSSKKYISNRRLPDIAIDL--VDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIE 338
+++ +K+ + N + D+ ID+ ++AC++ +N + + K++ + E++A +
Sbjct: 218 SLEKTKQRLQNE-VEDLMIDVERANAACAALDKKQKNFDKILAEWKQKYEETQAELEASQ 276
Query: 337 IDYEREKTDILAAR--INDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNK 164
+ T++ + + HL+ LK E L++ ++ + I E +LEK K
Sbjct: 277 KESRSLSTELFKMKNAYEESLDHLQTLKRENKNLQQEISDLTEQIAEGGKAIHELEKVKK 336
Query: 163 KLADAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSKDIAE 26
++ ++ + ALE L H KI EL +K+ + K IAE
Sbjct: 337 QI--EQEKSEIQAALEEAEASLEHEEGKILRLQLELNQVKSEIDRK-IAE 383
>gi|321453|pir||S27938 hypothetical protein 3 - sugarcane bacilliform virus >gi|294839
(M89923) ORF3 [Sugarcane bacilliform virus]
Length = 1871
Score = 34.0 bits (76), Expect = 1.4
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 6/137 (4%)
Query: 436 CSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTD--ILAARIN-DLKIHLEN 266
CS N++ E E+ + EL K + I+ + K + IL +N ++K H E
Sbjct: 907 CSEFCYNIKIEGAEAVKPPEKKSNYELLAKQLLIENSKLKMEKEILIEELNKEIKAHQET 966
Query: 265 LKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIH 86
K + + +EE+ E + I K+ + E + K + + H+
Sbjct: 967 KKGKELYIEEASTEVENEIETWKSRAELFEALYNEEVKKNKASTSSVTEGMYQVQIDHLR 1026
Query: 85 KKISELES---IKAVVTSKDIAE 26
K++ E+E+ + V S++ AE
Sbjct: 1027 KELREVEATLEVNKVEESEEEAE 1049
>gi|1351513|sp|P47460|HMW2_MYCGE CYTADHERENCE HIGH MOLECULAR WEIGHT PROTEIN 2 (CYTADHERENCE
ACCESSORY PROTEIN 2) >gi|1361637|pir||A64224
hypothetical protein MG218 - Mycoplasma genitalium
(SGC3) >gi|3844818 (U39701) cytadherence accessory
protein (hmw2) [Mycoplasma genitalium]
Length = 1805
Score = 34.0 bits (76), Expect = 1.4
Identities = 21/70 (30%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 346 AIEIDYEREKTDILAARINDLKIHLENL---KNELIPLEESYNEEKKNITE-LKNLKQKL 179
++E +++RE + +L + N++K H +NL K EL +++KK +E + LK+K+
Sbjct: 428 SLEYEHQRESSQLLKDKQNEVKQHFQNLEYAKKELDKERNLLDQQKKVDSEAIFQLKEKV 487
Query: 178 EKYNKKLADAEKVR 137
+ K+L + V+
Sbjct: 488 AQERKELEELYLVK 501
Score = 32.8 bits (73), Expect = 3.2
Identities = 20/78 (25%), Positives = 43/78 (54%), Gaps = 4/78 (5%)
Query: 292 NDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKL----ADAEKVRDHYT 125
N K ++ ++N+L+ +S +E KN+ LKN + + +KK+ D ++ + Y
Sbjct: 30 NRSKTDVDKIENQLLKEIKSLEDELKNLKGLKNQAEDNPELDKKINHLEVDLNRLVNEYK 89
Query: 124 ALEIKHEILPHIHKKISELESI 59
+ + H+ K+SEL+++
Sbjct: 90 NFQFQKN---HMVDKVSELDNL 108
>gi|1079110|pir||S49020 nuclear lamin C protein - fruit fly (Drosophila melanogaster)
>gi|531500|emb|CAA53480| (X75886) nuclear lamin C
protein [Drosophila melanogaster]
Length = 621
Score = 34.0 bits (76), Expect = 1.4
Identities = 34/107 (31%), Positives = 54/107 (49%), Gaps = 15/107 (14%)
Query: 418 NLENESQPVTM-LKEQMWSVELEIKAIEIDYEREKT------DILAARINDLKIHLENLK 260
NLENE+ +T L +V E ++ YE+E D A L+I ++ L
Sbjct: 66 NLENENSRLTQELNLAQDTVNRETSNLKAVYEKELAAARKLLDETAKEKAKLEIDIKRLW 125
Query: 259 NELIPLEESYNEEKKNITELKNLKQKLE--------KYNKKLADAEKVRDHYTALEIKHE 104
E L+ +++ K T +N + E KYN+ LAD +K D L +++E
Sbjct: 126 EENDDLKPRLDKKTKEATVAENNARLYENRYNEVNGKYNQALADRKKFEDQAKELALENE 185
Query: 103 IL 98
L
Sbjct: 186 RL 187
>gi|107132|pir||S12458 myosin beta heavy chain, cardiac and skeletal muscle - human
(fragment) >gi|29468|emb|CAA35940| (X51591) beta-myosin
heavy chain (1151 AA) [Homo sapiens]
Length = 1151
Score = 33.6 bits (75), Expect = 1.9
Identities = 45/178 (25%), Positives = 84/178 (46%), Gaps = 11/178 (6%)
Query: 571 LRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPV 392
L+E EA V +A +++ +K + N + D+ +D+ S ++A ++ + +
Sbjct: 613 LQEAEEAVEAV----NAKCSSLEKTKHRLQNE-IEDLMVDVERSNAAAAALDKKQRNFDK 667
Query: 391 TMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKI-------HLENLKNELIPLEES 233
+ + W + E E++ +++ L+ + LK HLE K E L+E
Sbjct: 668 ILAE---WKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLETFKRENKNLQEE 724
Query: 232 YNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKI----SELE 65
++ + + +LEK K+L +AEK+ + +ALE L H KI E
Sbjct: 725 ISDLTEQLGSSGKTIHELEKVRKQL-EAEKM-ELQSALEEAEASLEHEEGKILRAQLEFN 782
Query: 64 SIKAVVTSK 38
IKA + K
Sbjct: 783 QIKAEIERK 791
Score = 32.8 bits (73), Expect = 3.2
Identities = 31/121 (25%), Positives = 61/121 (49%), Gaps = 3/121 (2%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAA--RINDLKIHLENLKNELIPL 242
++N ++ + L E + + E KA++ +++ D+ A ++N L L+ ++ L
Sbjct: 191 VKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQVDDL 250
Query: 241 EESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALE-IKHEILPHIHKKISELE 65
E S +EKK +L+ K+KLE D + ++ LE K ++ + KK EL
Sbjct: 251 EGSLEQEKKVRMDLERAKRKLE------GDLKLTQESIMDLENDKQQLEERLKKKDFELN 304
Query: 64 SIKA 53
++ A
Sbjct: 305 ALNA 308
>gi|1173836|gb|AAA86615| (U38841) membrane nuclease A [Mycoplasma pulmonis]
Length = 470
Score = 33.6 bits (75), Expect = 1.9
Identities = 34/170 (20%), Positives = 86/170 (50%), Gaps = 15/170 (8%)
Query: 511 AVKSSKKYISNRRLPDIAIDLVDSACSSAIVNL--ENESQPVTM-----LKEQMWSVELE 353
A+ +K I++ +L ++ ++ I++L + E++ + + K++ + +
Sbjct: 48 AILLKQKQINSNKLEELIDSILPEGTELEILDLWVDRENKEINVKFRLRYKDRRYPYSSD 107
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+K I++ YE LENLK + P E+ + K+ + +N ++ +
Sbjct: 108 VKIIKLKYESI---------------LENLKPQEKPKEKPGRKSKEKNPKTQNDEKSKDG 152
Query: 172 YNKKLADAEKVR-DHYTALEI------KHEILPHIHKKIS-ELESIKAVVTSKDIAEIIS 17
NKK +K++ H+ L++ K + + KKI ++ + V + + + E+++
Sbjct: 153 LNKKSNGKQKMKWGHWNVLKLSDKNDKKIAAIAALIKKIDYDVVGLTEVFSEEAVKEVVA 212
Query: 16 RLTRI 2
+L ++
Sbjct: 213 QLNKL 217
>gi|416720|sp|P32985|BPS2_DESAM BPS2 PROTEIN >gi|99246|pir||S22195 bps2 protein - Desulfurolobus
ambivalens >gi|40782|emb|CAA45528| (X64202) bps2
[Acidianus ambivalens]
Length = 582
Score = 33.6 bits (75), Expect = 1.9
Identities = 30/118 (25%), Positives = 58/118 (48%), Gaps = 7/118 (5%)
Query: 361 ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNI---TELKNL 191
E+E K E+D + L ++L+ +E++K+ + LE E ++ E+ +
Sbjct: 338 EIEKKLKELDQISSEISKLKMSRSELENRIESVKSTIDDLERQRREMEERFNRNAEIYRV 397
Query: 190 KQKLEKYNKKLADAEKVRDHY----TALEIKHEILPHIHKKISELESIKAVVTSKDIAEI 23
+ NK++ + +K +D Y I IL I +K EL+ ++ +V + E
Sbjct: 398 YDINDSINKRIEELKKKKDEYEYELAINGIPSTILNKISEKQKELQEVQKMVDDLE-KEY 456
Query: 22 ISRLT 8
+ RLT
Sbjct: 457 MRRLT 461
>gi|833603|emb|CAA38180| (X54278) cytoskeletal tropomyosin [Coturnix coturnix]
Length = 248
Score = 33.6 bits (75), Expect = 1.9
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 340 EIDYEREKTDILAARINDLKIHLENLKNELIPLE---ESYNE-EKKNITELKNLKQKLEK 173
E++ E+ ++ + +DL+ L+N+ N L LE E Y+E E K E+K L KL++
Sbjct: 139 ELERAEERAEVSEVKCSDLEEELKNVTNNLKSLEAQSEKYSEKEDKYEEEIKILSDKLKE 198
Query: 172 YNKKLADAEK 143
+ AE+
Sbjct: 199 AETRAEFAER 208
>gi|386970 (M25142) myosin heavy chain beta-subunit [Homo sapiens]
Length = 611
Score = 33.6 bits (75), Expect = 1.9
Identities = 45/178 (25%), Positives = 84/178 (46%), Gaps = 11/178 (6%)
Query: 571 LRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPV 392
L+E EA V +A +++ +K + N + D+ +D+ S ++A ++ + +
Sbjct: 73 LQEAEEAVEAV----NAKCSSLEKTKHRLQNE-IEDLMVDVERSNAAAAALDKKQRNFDK 127
Query: 391 TMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKI-------HLENLKNELIPLEES 233
+ + W + E E++ +++ L+ + LK HLE K E L+E
Sbjct: 128 ILAE---WKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLETFKRENKNLQEE 184
Query: 232 YNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKI----SELE 65
++ + + +LEK K+L +AEK+ + +ALE L H KI E
Sbjct: 185 ISDLTEQLGSSGKTIHELEKVRKQL-EAEKM-ELQSALEEAEASLEHEEGKILRAQLEFN 242
Query: 64 SIKAVVTSK 38
IKA + K
Sbjct: 243 QIKAEIERK 251
>gi|29727|emb|CAA37068| (X52889) cardiac beta myosin heavy chain [Homo sapiens]
Length = 1934
Score = 33.6 bits (75), Expect = 1.9
Identities = 45/178 (25%), Positives = 84/178 (46%), Gaps = 11/178 (6%)
Query: 571 LRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPV 392
L+E EA V +A +++ +K + N + D+ +D+ S ++A ++ + +
Sbjct: 1397 LQEAEEAVEAV----NAKCSSLEKTKHRLQNE-IEDLMVDVERSNAAAAALDKKQRNFDK 1451
Query: 391 TMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKI-------HLENLKNELIPLEES 233
+ + W + E E++ +++ L+ + LK HLE K E L+E
Sbjct: 1452 ILAE---WKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLETFKRENKNLQEE 1508
Query: 232 YNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKI----SELE 65
++ + + +LEK K+L +AEK+ + +ALE L H KI E
Sbjct: 1509 ISDLTEQLGSSGKTIHELEKVRKQL-EAEKM-ELQSALEEAEASLEHEEGKILRAQLEFN 1566
Query: 64 SIKAVVTSK 38
IKA + K
Sbjct: 1567 QIKAEIERK 1575
Score = 32.5 bits (72), Expect = 4.2
Identities = 31/121 (25%), Positives = 61/121 (49%), Gaps = 3/121 (2%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAA--RINDLKIHLENLKNELIPL 242
++N ++ + L E + + E KA++ +++ D+ A ++N L L+ ++ L
Sbjct: 975 VKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQVDDL 1034
Query: 241 EESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALE-IKHEILPHIHKKISELE 65
E S +EKK +L+ K+KLE D + ++ LE K ++ + KK EL
Sbjct: 1035 EGSLEQEKKVRMDLERAKRKLE------GDLKLTQESIMDLENDKQQLDERLKKKDFELN 1088
Query: 64 SIKA 53
++ A
Sbjct: 1089 ALNA 1092
>gi|88195|pir||S02229 myosin beta heavy chain, cardiac muscle - human (fragment)
>gi|188986 (M17712) myosin heavy chain [Homo sapiens]
>gi|825694|emb|CAA30039| (X06976) beta myosin heavy
chain ( 544 AA) [Homo sapiens]
Length = 543
Score = 33.6 bits (75), Expect = 1.9
Identities = 45/178 (25%), Positives = 84/178 (46%), Gaps = 11/178 (6%)
Query: 571 LRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPV 392
L+E EA V +A +++ +K + N + D+ +D+ S ++A ++ + +
Sbjct: 5 LQEAEEAVEAV----NAKCSSLEKTKHRLQNE-IEDLMVDVERSNAAAAALDKKQRNFDK 59
Query: 391 TMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKI-------HLENLKNELIPLEES 233
+ + W + E E++ +++ L+ + LK HLE K E L+E
Sbjct: 60 ILAE---WKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLETFKRENKNLQEE 116
Query: 232 YNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKI----SELE 65
++ + + +LEK K+L +AEK+ + +ALE L H KI E
Sbjct: 117 ISDLTEQLGSSGKTIHELEKVRKQL-EAEKM-ELQSALEEAEASLEHEEGKILRAQLEFN 174
Query: 64 SIKAVVTSK 38
IKA + K
Sbjct: 175 QIKAEIERK 183
>gi|130221|sp|P10894|PIP1_BOVIN 1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE PHOSPHODIESTERASE BETA 1
(PLC-BETA-1) (PHOSPHOLIPASE C-BETA-1) (PLC-I) (PLC-154)
>gi|89334|pir||A28822
1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase
(EC 3.1.4.11) I - bovine >gi|163522 (J03137)
phospholipase C [Bos taurus]
Length = 1216
Score = 33.6 bits (75), Expect = 1.9
Identities = 33/135 (24%), Positives = 68/135 (49%), Gaps = 2/135 (1%)
Query: 502 SSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQP--VTMLKEQMWSVELEIKAIEIDY 329
SS ++S+ D+A +D+ + +V+L+++ Q + + +EQ +S + +
Sbjct: 981 SSPDHVSSTIEQDLAA--LDAEMTQKLVDLKDKQQQQLLNLRQEQYYSEKYQ-------- 1030
Query: 328 EREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADA 149
+RE +L ++ D+ +N N+L L+E +EK K LK+K++K ++
Sbjct: 1031 KREHIKLLIQKLTDVAEECQN--NQLKKLKEICEKEK------KELKKKMDKKRQEKITE 1082
Query: 148 EKVRDHYTALEIKHEIL 98
K +D E K E++
Sbjct: 1083 AKSKDKSQMEEEKTEMI 1099
>gi|226908|prf||1611219A phospholipase C 154 [Bos taurus]
Length = 1216
Score = 33.6 bits (75), Expect = 1.9
Identities = 33/135 (24%), Positives = 68/135 (49%), Gaps = 2/135 (1%)
Query: 502 SSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQP--VTMLKEQMWSVELEIKAIEIDY 329
SS ++S+ D+A +D+ + +V+L+++ Q + + +EQ +S + +
Sbjct: 981 SSPDHVSSTIEQDLAA--LDAEMTQKLVDLKDKQQQQLLNLRQEQYYSEKYQ-------- 1030
Query: 328 EREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADA 149
+RE +L ++ D+ +N N+L L+E +EK K LK+K++K ++
Sbjct: 1031 KREHIKLLIQKLTDVAEECQN--NQLKKLKEICEKEK------KELKKKMDKKRQEKITE 1082
Query: 148 EKVRDHYTALEIKHEIL 98
K +D E K E++
Sbjct: 1083 AKSKDKSQMEEEKTEMI 1099
>gi|2134996|pir||A38194 desmoplakin I - human
Length = 2677
Score = 33.6 bits (75), Expect = 1.9
Identities = 30/125 (24%), Positives = 60/125 (48%)
Query: 412 ENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEES 233
EN ++ ML+E++ ++ LE + +D A I +L+ L+ N + L+
Sbjct: 1517 ENLTKEHLMLEEELRNLRLEYDDLRRGRSEADSD-KNATILELRSQLQISNNRTLELQGL 1575
Query: 232 YNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKA 53
N+ ++ E +NL+Q++EK+ K+ +A E K++ + ++ S L IK
Sbjct: 1576 INDLQR---ERENLRQEIEKFQKQALEASN-----RIQESKNQCTQVVQERESLLVKIKV 1627
Query: 52 VVTSK 38
+ K
Sbjct: 1628 LEQDK 1632
>gi|4379031|emb|CAA27381| (X03741) myosin heavy chain (635 AA) [Homo sapiens]
Length = 635
Score = 33.6 bits (75), Expect = 1.9
Identities = 45/178 (25%), Positives = 84/178 (46%), Gaps = 11/178 (6%)
Query: 571 LRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPV 392
L+E EA V +A +++ +K + N + D+ +D+ S ++A ++ + +
Sbjct: 97 LQEAEEAVEAV----NAKCSSLEKTKHRLQNE-IEDLMVDVERSNAAAAALDKKQRNFDK 151
Query: 391 TMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKI-------HLENLKNELIPLEES 233
+ + W + E E++ +++ L+ + LK HLE K E L+E
Sbjct: 152 ILAE---WKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLETFKRENKNLQEE 208
Query: 232 YNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKI----SELE 65
++ + + +LEK K+L +AEK+ + +ALE L H KI E
Sbjct: 209 ISDLTEQLGSSGKTIHELEKVRKQL-EAEKM-ELQSALEEAEASLEHEEGKILRAQLEFN 266
Query: 64 SIKAVVTSK 38
IKA + K
Sbjct: 267 QIKAEIERK 275
>gi|4557773|oth|NP_000248|PMYH7 myosin heavy chain 7 >gi|547966|sp|P12883|MYSB_HUMAN MYOSIN HEAVY
CHAIN, CARDIAC MUSCLE BETA ISOFORM >gi|107137|pir||A37102
myosin beta heavy chain, cardiac and skeletal muscle -
human >gi|179508 (M57965) beta-myosin heavy chain [Homo
sapiens] >gi|179510 (M58018) beta-myosin heavy chain
[Homo sapiens]
Length = 1935
Score = 33.6 bits (75), Expect = 1.9
Identities = 45/178 (25%), Positives = 84/178 (46%), Gaps = 11/178 (6%)
Query: 571 LRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPV 392
L+E EA V +A +++ +K + N + D+ +D+ S ++A ++ + +
Sbjct: 1397 LQEAEEAVEAV----NAKCSSLEKTKHRLQNE-IEDLMVDVERSNAAAAALDKKQRNFDK 1451
Query: 391 TMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKI-------HLENLKNELIPLEES 233
+ + W + E E++ +++ L+ + LK HLE K E L+E
Sbjct: 1452 ILAE---WKQKYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLETFKRENKNLQEE 1508
Query: 232 YNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKI----SELE 65
++ + + +LEK K+L +AEK+ + +ALE L H KI E
Sbjct: 1509 ISDLTEQLGSSGKTIHELEKVRKQL-EAEKM-ELQSALEEAEASLEHEEGKILRAQLEFN 1566
Query: 64 SIKAVVTSK 38
IKA + K
Sbjct: 1567 QIKAEIERK 1575
Score = 32.5 bits (72), Expect = 4.2
Identities = 31/121 (25%), Positives = 61/121 (49%), Gaps = 3/121 (2%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAA--RINDLKIHLENLKNELIPL 242
++N ++ + L E + + E KA++ +++ D+ A ++N L L+ ++ L
Sbjct: 975 VKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQVDDL 1034
Query: 241 EESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALE-IKHEILPHIHKKISELE 65
E S +EKK +L+ K+KLE D + ++ LE K ++ + KK EL
Sbjct: 1035 EGSLEQEKKVRMDLERAKRKLE------GDLKLTQESIMDLENDKQQLDERLKKKDFELN 1088
Query: 64 SIKA 53
++ A
Sbjct: 1089 ALNA 1092
>gi|1129173|emb|CAA63826| (X94082) KLP2 protein [Xenopus laevis] >gi|1587181|prf||2206309A
kinesin-like protein [Xenopus laevis]
Length = 1388
Score = 33.6 bits (75), Expect = 1.9
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 436 CSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKT--DILAARINDLKIHLENL 263
CS+ I L N S+ KEQ + +IK++E + K+ D+L + ++DL++ L++
Sbjct: 759 CSTQIQELFN-SERSNWNKEQQ-DLIAQIKSLEKQKQENKSQEDVLKSEVHDLRVVLQSA 816
Query: 262 KNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVR-DHYTALEIKHEI 101
EL ++ Y+ ++ + K L Q ++ + VR +H T LE K +
Sbjct: 817 DRELGAVKGEYSLYREK--QEKELSQLSARHMDVQLQLDNVRLEHETLLEEKRSL 869
>gi|2352260 (AF000949) keratin [Canis familiaris]
Length = 786
Score = 33.6 bits (75), Expect = 1.9
Identities = 24/92 (26%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 340 EIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKK 161
+I+ R+ D L + +DL++H E+L+ ELI L++++ +E +T + +E
Sbjct: 240 DINGLRKVLDDLTMQKSDLEMHYESLQEELIALKKNHEDEMSQLTGQNSGDVNVEMNAAP 299
Query: 160 LADAEKV----RDHYTALEIKH--EILPHIHKKISELE 65
D K+ R+ Y + K+ +I ++S++E
Sbjct: 300 GRDLTKILNDMREEYERISAKNRKDIEEQYETQMSQME 337
>gi|3219986|sp|Q09560|YQY1_CAEEL HYPOTHETICAL 108.9 KD PROTEIN F36G3.1 IN CHROMOSOME X
>gi|3876758|emb|CAA87338| (Z47069) posesses coiled-coil
domain; cDNA EST EMBL:Z14428 comes from this gene; cDNA
EST EMBL:Z14485 comes from this gene; cDNA EST
EMBL:D34253 comes from this gene; cDNA EST EMBL:D37285
comes from this gene; cDNA EST EMBL:C10...
Length = 964
Score = 33.6 bits (75), Expect = 1.9
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 18/84 (21%)
Query: 385 LKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYN------- 227
LKE++ + I IEI+ E++ T+ L + I++L ++ EL L+E
Sbjct: 689 LKEELEESQQTIDGIEIEAEQQYTE-LTSEIDELCEIVQRKDQELAILKEKVTNVINIEN 747
Query: 226 ------EEKKNITE-----LKNLKQKLEKYNKKLADAEKVRD 134
+ +K I + ++NL+++L+ KKL + K+RD
Sbjct: 748 SLKDDVDSQKVIVQRQKEIIENLREELDAITKKLGEVTKLRD 789
>gi|2194112 (U81495) unknown [Oxytricha fallax]
Length = 1088
Score = 33.6 bits (75), Expect = 1.9
Identities = 30/121 (24%), Positives = 56/121 (45%), Gaps = 2/121 (1%)
Query: 514 FAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEI 335
F KS K +I R + LV + L+ + + L++ +E E++ ++
Sbjct: 843 FTQKSFKNFIRVVRSNNYQEQLVQT--------LDQKEDYIQQLQKDKQYLEQELQNVQQ 894
Query: 334 DYEREKTDILAARINDLKIHLENLKNELIPLEESYNEE--KKNITELKNLKQKLEKYNKK 161
++ + + R D + L+N K E + E+ +E +K ELKNLK L ++ K+
Sbjct: 895 TLDQTEDKLQRLR-KDRENELQNQKREYFRVLETAKKEVQRKYSDELKNLKNYLREFKKR 953
Query: 160 LAD 152
D
Sbjct: 954 FLD 956
>gi|2586071 (AF027728) kinesin-related protein [Xenopus laevis]
Length = 2954
Score = 33.6 bits (75), Expect = 1.9
Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Query: 445 DSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDY-EREKTDILAARINDLKIHLE 269
D A + I E S + E + +++ E Y +R ++++ +L+ E
Sbjct: 1980 DEAANKVIALTEKMSSLEEQINENVTTLKEGEGEKETFYLQRPSKQQSSSQMEELR---E 2036
Query: 268 NLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHI 89
+LK + + LEE+ E + E+KNL K+ +++ + + + + E L H
Sbjct: 2037 SLKTKDLQLEEAEKEISEATNEIKNLTAKISSLEEEILQNASILNEAVS---ERENLRHS 2093
Query: 88 HKK-ISELESIKAVVTSKDIA 29
++ +SELE + + S+D A
Sbjct: 2094 KQQLVSELEQLSLTLKSRDHA 2114
Score = 32.8 bits (73), Expect = 3.2
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 14/129 (10%)
Query: 442 SACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDY---EREKTDI---LAARINDLK 281
S + A+ EN L ++ + L +K+ + + +REK + +A+ ++K
Sbjct: 2078 SILNEAVSERENLRHSKQQLVSELEQLSLTLKSRDHAFAQSKREKDEAVNKIASLAEEIK 2137
Query: 280 IHLENLKNELIPLEESYNEEKKNI--------TELKNLKQKLEKYNKKLADAEKVRDHYT 125
I + + +E +ES E+ ++ TEL+ LKQ+ E N KLA+ K D
Sbjct: 2138 ILTKEM-DEFRDSKESLQEQSSHLSEELCTYKTELQMLKQQKEDINNKLAEKVKEVD--- 2193
Query: 124 ALEIKHEILPHIHKKISELESIK 56
E+L H+ +L+ I+
Sbjct: 2194 ------ELLQHLSSLKEQLDQIQ 2210
>gi|833602|emb|CAA38179| (X54277) cardiac tropomyosin [Coturnix coturnix]
Length = 284
Score = 33.6 bits (75), Expect = 1.9
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 340 EIDYEREKTDILAARINDLKIHLENLKNELIPLE---ESYNE-EKKNITELKNLKQKLEK 173
E++ E+ ++ + +DL+ L+N+ N L LE E Y+E E K E+K L KL++
Sbjct: 175 ELERAEERAEVSEVKCSDLEEELKNVTNNLKSLEAQSEKYSEKEDKYEEEIKILSDKLKE 234
Query: 172 YNKKLADAEK 143
+ AE+
Sbjct: 235 AETRAEFAER 244
>gi|1147813 (M77830) desmoplakin I [Homo sapiens]
Length = 2871
Score = 33.6 bits (75), Expect = 1.9
Identities = 30/125 (24%), Positives = 60/125 (48%)
Query: 412 ENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEES 233
EN ++ ML+E++ ++ LE + +D A I +L+ L+ N + L+
Sbjct: 1711 ENLTKEHLMLEEELRNLRLEYDDLRRGRSEADSD-KNATILELRSQLQISNNRTLELQGL 1769
Query: 232 YNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKA 53
N+ ++ E +NL+Q++EK+ K+ +A E K++ + ++ S L IK
Sbjct: 1770 INDLQR---ERENLRQEIEKFQKQALEASN-----RIQESKNQCTQVVQERESLLVKIKV 1821
Query: 52 VVTSK 38
+ K
Sbjct: 1822 LEQDK 1826
>gi|4062999|dbj|BAA36219| (AB021681) tropomyosin [Chlamys nipponensis]
Length = 284
Score = 33.6 bits (75), Expect = 1.9
Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 18/118 (15%)
Query: 454 DLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYER---------EKTDILA 302
D+ + A LEN + +T L+ + +++ ++ +E D+ER EK + +
Sbjct: 58 DVANEQLQEANTKLENSDKQITQLESDVGALQRRLQLLEEDFERSEEKLATTTEKLEEAS 117
Query: 301 ARINDLKIHLENLKNELIPLEESYNEEKKNITELKNL----KQKLEKYNKKLA----DAE 146
++ + + + L+ EE + +K + KN+ QK ++ +KLA D E
Sbjct: 118 KAADESERNRKVLEGRSNTAEERIDVLEKQLETAKNVATDADQKFDEAARKLAITEVDLE 177
Query: 145 KVRDHYTALEIK-HEI 101
+ A + K HE+
Sbjct: 178 RAETRLEAADAKVHEL 193
>gi|3702136|emb|CAA19927| (AL031058) dJ512B11.1 (Desmoplakin I (DPI)) [Homo sapiens]
Length = 2871
Score = 33.6 bits (75), Expect = 1.9
Identities = 30/125 (24%), Positives = 60/125 (48%)
Query: 412 ENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEES 233
EN ++ ML+E++ ++ LE + +D A I +L+ L+ N + L+
Sbjct: 1711 ENLTKEHLMLEEELRNLRLEYDDLRRGRSEADSD-KNATILELRSQLQISNNRTLELQGL 1769
Query: 232 YNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKA 53
N+ ++ E +NL+Q++EK+ K+ +A E K++ + ++ S L IK
Sbjct: 1770 INDLQR---ERENLRQEIEKFQKQALEASN-----RIQESKNQCTQVVQERESLLVKIKV 1821
Query: 52 VVTSK 38
+ K
Sbjct: 1822 LEQDK 1826
>gi|3764015|emb|CAA15608| (AL008970) predicted using hexExon; MAL3P4.18 (PFC0475c),
Hypothetical protein, len: 482 aa [Plasmodium
falciparum]
Length = 481
Score = 33.6 bits (75), Expect = 1.9
Identities = 15/42 (35%), Positives = 25/42 (58%)
Query: 292 NDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYN 167
ND+ + NLK+ + +++E +N TE KN+ KL+K N
Sbjct: 181 NDMSLKQNNLKHTHLNSRSDFSKECENTTESKNITMKLKKEN 222
>gi|3882269|dbj|BAA34494| (AB018317) KIAA0774 protein [Homo sapiens]
Length = 1163
Score = 33.6 bits (75), Expect = 1.9
Identities = 34/114 (29%), Positives = 63/114 (54%), Gaps = 19/114 (16%)
Query: 385 LKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYN---EEKK 215
++E M + ELE K +E ++E+ + L +++ L ++L++ EE+ EE+
Sbjct: 961 VQELMSTHELEKKELEENFEKLRLS-LQDQVDTLTFQSQSLRDRARRFEEALRKNTEEQL 1019
Query: 214 NIT---------ELKNLKQKLEKYN-------KKLADAEKVRDHYTALEIKHEILPHIHK 83
I ++K+LKQ LE N KK+ + EK+ + LE K ++L ++
Sbjct: 1020 EIALAPYQHLEEDMKSLKQVLEMKNQQIHEQEKKILELEKLAEKNIILEEKIQVLQQQNE 1079
Query: 82 KISELESIKAVVT 44
+ VVT
Sbjct: 1080 DLKARIDQNTVVT 1092
>gi|915306 (U20609) paramyosin-related protein [Onchocerca gibsoni]
Length = 672
Score = 33.6 bits (75), Expect = 1.9
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 7/136 (5%)
Query: 586 TILRGLRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLEN 407
TI RE +A H VK +D L + S R + I + +S ++++E
Sbjct: 404 TITHRQRELDDAKHTVKDLEDRLKSLEQEKASIDSVRHHLEDEIAKMREQFNSTLLDVER 463
Query: 406 ESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYN 227
+ + + E +I+ E+ + ++L LK + +KN + +E+ YN
Sbjct: 464 RAAEDADERIRKMDEETKIRISELT---NRIEMLLEENKRLKDENDEMKNRIQDIEKEYN 520
Query: 226 ------EEKKN-ITELKNLKQKL 179
EEK N + L+N++Q+L
Sbjct: 521 TIIRKLEEKDNALKNLENIRQRL 543
>gi|1842051 (U87231) myosin heavy chain [Gallus gallus]
Length = 1939
Score = 33.6 bits (75), Expect = 1.9
Identities = 30/123 (24%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAA--RINDLKIHLENLKNELIPL 242
++N ++ + +L E + + E KA++ +++ D+ ++N L L+ ++ L
Sbjct: 978 VKNFTEEMAVLDETIAKLTKEKKALQEAHQQTLDDLQVEEDKVNTLTKAKTKLEQQVDDL 1037
Query: 241 EESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALE-IKHEILPHIHKKISELE 65
E S +EKK +L+ K+KLE D + D LE K ++ + KK E+
Sbjct: 1038 EGSLEQEKKLRMDLERAKRKLE------GDLKLAHDSIMDLENDKQQLDEKLKKKDFEIS 1091
Query: 64 SIKAVV 47
I++ +
Sbjct: 1092 QIQSKI 1097
Score = 32.1 bits (71), Expect = 5.6
Identities = 38/152 (25%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 511 AVKSSKKYISNRRLPDIAIDLVDS--ACSSAIVNLENESQPVTMLKEQMWSVELEIKAIE 338
+++ +K+ + N + D+ +D+ S AC++ +N + + K++ + E++A +
Sbjct: 1416 SLEKTKQRLQNE-VEDLMVDVERSNAACAALDKKQKNFDKILAEWKQKYEETQTELEASQ 1474
Query: 337 IDYEREKTDILAAR--INDLKIHLENLK-------NELIPLEESYNEEKKNITELKNLKQ 185
+ T++ + + HLE LK E+ L E E K + EL+ +K+
Sbjct: 1475 KESRSLSTELFKMKNAYEESLDHLETLKRENKNLQQEIADLTEQIAEGGKAVHELEKVKK 1534
Query: 184 KLEKYNKK----LADAEKVRDHYTAL---------EIKHEILPHIHKKISELESIK 56
+E+ + L +AE +H +IK EI I +K E++ +K
Sbjct: 1535 HVEQEKSELQASLEEAEASLEHEEGKILRLQLELNQIKSEIDRKIAEKDEEIDQLK 1590
>gi|2827709|emb|CAA16682| (AL021684) predicted protein [Arabidopsis thaliana]
Length = 1421
Score = 33.6 bits (75), Expect = 1.9
Identities = 40/164 (24%), Positives = 74/164 (44%), Gaps = 5/164 (3%)
Query: 568 RERFEAHHGVKISDDALVFAVKSSKKYISNR-RLPDIAID----LVDSACSSAIVNLENE 404
RER + G+++ L + +++ ++ + N R + A + L + S E E
Sbjct: 639 RERADFLLGIEMQKRELEYCIENKREELENSSRDREKAFEQEKKLEEERIQSLKEMAEKE 698
Query: 403 SQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNE 224
+ V + +++ + LEIK ERE + L + +LK+ E L+ + L +E
Sbjct: 699 LEHVQVELKRLDAERLEIKLDRERREREWAE-LKDSVEELKVQREKLETQRHMLRAERDE 757
Query: 223 EKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKI 77
+ I ELK KLE L D + + LE E + + +K+
Sbjct: 758 IRHEIEELK----KLENLKVALDDMSMAKMQLSNLERSWEKVSALKQKV 802
>gi|118458|sp|P15924|DESP_HUMAN DESMOPLAKIN I AND II (DPI AND DPII) >gi|181608 (J05211) desmoplakin
[Homo sapiens]
Length = 1752
Score = 33.6 bits (75), Expect = 1.9
Identities = 30/125 (24%), Positives = 60/125 (48%)
Query: 412 ENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEES 233
EN ++ ML+E++ ++ LE + +D A I +L+ L+ N + L+
Sbjct: 592 ENLTKEHLMLEEELRNLRLEYDDLRRGRSEADSD-KNATILELRSQLQISNNRTLELQGL 650
Query: 232 YNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKA 53
N+ ++ E +NL+Q++EK+ K+ +A E K++ + ++ S L IK
Sbjct: 651 INDLQR---ERENLRQEIEKFQKQALEASN-----RIQESKNQCTQVVQERESLLVKIKV 702
Query: 52 VVTSK 38
+ K
Sbjct: 703 LEQDK 707
>gi|1351174|sp|P47251|SYS_MYCGE SERYL-TRNA SYNTHETASE (SERINE--TRNA LIGASE) (SERRS)
>gi|1361847|pir||E64200 serine--tRNA ligase (EC
6.1.1.11) - Mycoplasma genitalium (SGC3) >gi|1045673
(U39679) seryl-tRNA synthetase (serS) [Mycoplasma
genitalium]
Length = 417
Score = 33.2 bits (74), Expect = 2.5
Identities = 24/81 (29%), Positives = 40/81 (48%), Gaps = 3/81 (3%)
Query: 298 RINDLKIHLENLKNELIPLEESYNEE-KKNITELKNLKQKLEKYNKKLADAEKVRDH--Y 128
R N ++ L N K L+ + + ++ KK + E K LKQK+E N D++ +
Sbjct: 39 RKNLQQLELANQKQSLLAKQVAKQKDNKKLLAESKELKQKIENLNNAYKDSQNISQDLLL 98
Query: 127 TALEIKHEILPHIHKKISELESIK 56
I HE +P + + LE +K
Sbjct: 99 NFPNIAHESVPVGKNESANLELLK 122
>gi|2983555 (AE000721) putative protein [Aquifex aeolicus]
Length = 374
Score = 33.2 bits (74), Expect = 2.5
Identities = 28/94 (29%), Positives = 56/94 (58%), Gaps = 33/94 (35%)
Query: 433 SSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKT-------------------- 314
S+ + +E+ + L+E++ VE +IK +++D+ER K+
Sbjct: 117 SAKKLKVESLKKKREALREKLLQVEEKIKLVKLDWERYKSLFQKGLIPRRKFEEVDTNLK 176
Query: 313 ------DILAARINDL-------KIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK 173
+ L I ++ K +EN +NE +EE E E+K+LK++++
Sbjct: 177 VLLHEREYLEKSIQEINTEIKRAKKGIENARNEFKTIEELKKELSSLEEEIKSLKERIKT 236
Query: 172 YNKKLAD 152
+K+ D
Sbjct: 237 AEQKIKD 243
>gi|477300|pir||A48575 paramyosin - nematode (Onchocerca volvulus)
Length = 879
Score = 33.2 bits (74), Expect = 2.5
Identities = 26/112 (23%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 400 QPVTMLKEQMWSVELEIKAIEIDYEREKTDI---------LAARINDLKIHLENLKNELI 248
Q ++ L++ ++ E++ + +D E+ + I L + +LK+ ++ L EL
Sbjct: 341 QKISQLEKAKSRLQSEVEVLIVDLEKAQNTIAILERAKEQLEKTVMELKVRIDELTVELE 400
Query: 247 PLEESYNEEKKNITELKNLKQKLEKYNKKLA-DAEKVRDHYTALEIKHEILPHIHKKISE 71
+ + ++KNL +K + + LA + +K++D L E L ++K+ E
Sbjct: 401 AAQREARAALAELQKMKNLYEKAVEQKEALARENKKLQDD---LHEAKEALADANRKLHE 457
Query: 70 LE 65
L+
Sbjct: 458 LD 459
>gi|665935 (U20341) ORF IV [Cassava vein mosaic virus]
Length = 201
Score = 33.2 bits (74), Expect = 2.5
Identities = 24/114 (21%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 400 QPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEE 221
+ + +++ + + I+ IE + E ++ L + + K+H EN++ +E+ +
Sbjct: 10 EKLNTIEKNISETNIRIEKIEKEQELKRKVELYGKEPEKKLHKENIEKLSSSIEDKIIQN 69
Query: 220 -KKNITELKNLKQKLE-----KYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESI 59
K + +++N++++ + K NK L+ EK +++ + + L H K+ EL S+
Sbjct: 70 IDKKLKKIENVEEQYQWKNIVKINKPLSVGEKYMENFKKILV---YLGEKHPKLEELYSL 126
>gi|806515|dbj|BAA09069| (D50476) myosin heavy chain [Cyprinus carpio]
Length = 955
Score = 33.2 bits (74), Expect = 2.5
Identities = 38/143 (26%), Positives = 68/143 (46%), Gaps = 11/143 (7%)
Query: 466 DIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARIND 287
D+ ID+ +S NL+ + + + + W + E E++ +++ L+ +
Sbjct: 448 DLMIDV--ERANSLAANLDKKQRNFDKVLAE-WKQKYEESQAELEGAQKEARSLSTELFK 504
Query: 286 LKI-------HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHY 128
+K HLE LK E L++ ++ + + E +LEK KK ++EK +
Sbjct: 505 MKNSYEEALDHLETLKRENKNLQQEISDLTEQLGETGKSIHELEK-AKKTVESEK-SEIQ 562
Query: 127 TALEIKHEILPHIHKKI----SELESIKAVVTSK 38
TALE L H KI EL +K+ + K
Sbjct: 563 TALEEAEGTLEHEESKILRVQLELNQVKSEIDRK 596
>gi|2224613|dbj|BAA20794| (AB002334) KIAA0336 [Homo sapiens]
Length = 1583
Score = 33.2 bits (74), Expect = 2.5
Identities = 25/82 (30%), Positives = 43/82 (51%)
Query: 301 ARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTA 122
+ IN +K +ENLKNEL+ + Y+E+K N+ KQ E N +L +E+
Sbjct: 22 SHINYVK-EIENLKNELMAVRSKYSEDKANLQ-----KQLEEAMNTQLELSEQ------- 68
Query: 121 LEIKHEILPHIHKKISELESIK 56
L+ ++ ++ K E+E I+
Sbjct: 69 LKFQNNSEDNVKKLQEEIEKIR 90
Score = 33.2 bits (74), Expect = 2.5
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 2/138 (1%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAI--EIDYEREKTDILAARINDLKIHLENLKNELIPL 242
++ ++Q T++ ++ E +K + ++ + K + L I K E L+ E+ L
Sbjct: 1047 VKKDAQQTTLMNMEIADYERLMKELNQKLTNKNNKIEDLEQEIKIQKQKQETLQEEITSL 1106
Query: 241 EESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES 62
+ S + ++ T++K L L K K+LAD+++ E H IL K E
Sbjct: 1107 QSSVQQYEEKNTKIKQL---LVKTKKELADSKQA-------ETDHLILQASLKGELEASQ 1156
Query: 61 IKAVVTSKDIAEIISRLTRI 2
+ V +AEI S +I
Sbjct: 1157 QQVEVYKIQLAEITSEKHKI 1176
>gi|2702432 (AF038613) contains similarity to nonmuscle myosins [Caenorhabditis
elegans]
Length = 654
Score = 33.2 bits (74), Expect = 2.5
Identities = 32/104 (30%), Positives = 49/104 (46%), Gaps = 6/104 (5%)
Query: 325 REKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKK----L 158
RE I A R ++HL K+ L + NE +K ITEL+ KQ + +
Sbjct: 534 RESVSITAER----EVHLSQQKHHLQQVSSQLNEARKEITELRRTKQNPSETGDRDQIIR 589
Query: 157 ADAEKVRDHYTAL-EIKHE-ILPHIHKKISELESIKAVVTSKDIAEIISR 14
A + R H L ++K E +L I +K + L ++ +D E I R
Sbjct: 590 AIETERRQHLEQLFQLKQEALLAAISEKDTHLALLEKSRGPRDEIETIRR 639
>gi|3257342|dbj|BAA30025| (AP000004) 879aa long hypothetical purine NTPase [Pyrococcus
horikoshii]
Length = 879
Score = 33.2 bits (74), Expect = 2.5
Identities = 28/117 (23%), Positives = 61/117 (51%), Gaps = 10/117 (8%)
Query: 355 EIKAIEIDYER--EKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK 182
E++ E +Y R E D + N+L+ L L N L ++ + + + ++ ++++
Sbjct: 290 ELEKKETEYRRLIEFKDEYLVKKNELEKRLGILSNRLQEVKRKIKDAESKVARIRWIEER 349
Query: 181 LEKYNKKLADAE-KVRDHYTALEIKHEILPHIHKKISELESIK-------AVVTSKDIAE 26
L++ +K+ E +VR+ A+ +K + + + K+ LE K K++ E
Sbjct: 350 LKEIQEKIMKLEPRVREFEDAMRLKAQ-MESLKSKLGGLEPEKINEKLLYLENRKKELEE 408
Query: 25 IISRLTR 5
I ++TR
Sbjct: 409 EIDKITR 415
>gi|386973 (M21665) beta-myosin heavy chain [Homo sapiens]
Length = 524
Score = 33.2 bits (74), Expect = 2.5
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 11/156 (7%)
Query: 493 KYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKT 314
K+ + D+ +D+ S ++A ++ + + + + W + E E++ +++
Sbjct: 7 KHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAE---WKQKYEESQSELESSQKEA 63
Query: 313 DILAARINDLKI-------HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA 155
L+ + LK HLE K E L+E ++ + + +LEK K+L
Sbjct: 64 RSLSTELFKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGSSGKTIHELEKVRKQL- 122
Query: 154 DAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSKDIAE 26
+AEK+ + +ALE L H KI E IKA + +++AE
Sbjct: 123 EAEKM-ELQSALEEAEASLEHEEGKILRAQLEFNQIKAEI-ERNVAE 167
>gi|1297319 (U53445) DOC1 [Homo sapiens]
Length = 752
Score = 33.2 bits (74), Expect = 2.5
Identities = 32/145 (22%), Positives = 62/145 (42%)
Query: 490 YISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTD 311
++ R+ + + +A L+ E VT + E++ +E +A+ + KTD
Sbjct: 246 FVDERKTMSEKLKKTEDKLQAASSQLQVEQNKVTTVTEKL--IEETKRAL-----KSKTD 298
Query: 310 ILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDH 131
+ ++ + ++LKN+L EE N+ + LKN Q LE K + +D
Sbjct: 299 V-EEKMYSVTKERDDLKNKLKAEEEKGNDLLSRVNMLKNRLQSLEAIEKDFLKNKLNQDS 357
Query: 130 YTALEIKHEILPHIHKKISELESIK 56
+ H+ I + E+E +K
Sbjct: 358 GKSTTALHQENNKIKELSQEVERLK 382
>gi|2808622|emb|CAA74664| (Y14289) type I keratin S5 [Oncorhynchus mykiss]
Length = 438
Score = 33.2 bits (74), Expect = 2.5
Identities = 50/220 (22%), Positives = 98/220 (43%), Gaps = 18/220 (8%)
Query: 835 QIESDDKSILFVDEFHTMVSAGASNEGS---LDCTNMLKPSLASGKIKCIGATTFYEYRK 665
++ +DD + F E S A G +D TNM + +L S +I+ + + +
Sbjct: 167 RLAADDFRVKFESELSIRQSVEADIVGLRKVIDDTNMGRMNLES-EIEALKEELIFLKKN 225
Query: 664 Y----IENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKISDDALVFAVKSS 497
+ +E +++ V+++V P D I+ +R ++E A+K+
Sbjct: 226 HDNEVMEMRNMISQSGVQVDVDAPKGQDLAAIMAEVRAKYEKE------------ALKNQ 273
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
++ + + I V S S L+ + L+ Q+ ++E IE+D ++
Sbjct: 274 EEL---KAWHETRITEVQSVVSQNTEALQGAHTEINDLRRQLQTLE-----IELDSQKSL 325
Query: 316 TDILAARINDLKIH----LENLKNELIPLEESYNEEKKNITE-------LKNLKQKLE 176
L + D ++ +E+L L+ LE + NI + L N+K KLE
Sbjct: 326 KGSLEGTLRDTEMRYNMEMESLNKILVGLESELTNLRSNIQQQTQEYEHLLNIKMKLE 383
>gi|4580769|gb|AAD24499|AF083812_1 (AF083812) mitotic checkpoint protein isoform MAD1a [Mus musculus]
Length = 717
Score = 33.2 bits (74), Expect = 2.5
Identities = 46/218 (21%), Positives = 99/218 (45%), Gaps = 24/218 (11%)
Query: 676 EYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKISDDALVFAVKSS 497
E RK E +ALARR K N DG+ + G S D+ + + S
Sbjct: 382 EERKKRETHEALARRLQKRNALLTKERDGMRAILG-------------SYDSELTQTEYS 428
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIE------- 338
+ + + V + S L + + + K++ ++E+E+K ++
Sbjct: 429 TQLTQRLWEAEDMVQKVHAHSSEMEAQLSQALEELGVQKQRADTLEMELKMLKAQTSSAE 488
Query: 337 --IDYEREKTDILAARINDLKIHLENLKN---------ELIPLEESYNEEKKNITELK-- 197
+ +E+ D L ++ +L+ L+ E + L+ YN+ + + +
Sbjct: 489 SSFSFCKEEVDALRLKVEELEGERSRLEQEKQVLEMQMEKLTLQGDYNQSRTKVLHMSLN 548
Query: 196 ----NLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDIA 29
+++ E +++ + E++R ALE I ++LE+ ++ +SK++A
Sbjct: 549 PISMARQRQHEDHDRLQEECERLRGLVHALERGGPI-------PADLEAASSLPSSKEVA 601
Query: 28 EI 23
E+
Sbjct: 602 EL 603
>gi|625090 (U19464) outer arm dynein beta heavy chain [Paramecium tetraurelia]
>gi|1588498|prf||2208428A dynein:SUBUNIT=heavy chain
[Paramecium tetraurelia]
Length = 4588
Score = 33.2 bits (74), Expect = 2.5
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 391 TMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKN 212
T K Q+ EL+IK +E+D ++ +TDIL ++ E + EE N K
Sbjct: 3136 TQGKVQLLQAELKIKMVEVDKKKNETDILIEKVGKESAVAEVEQKIANEEEEKTNAASKA 3195
Query: 211 ITEL-KNLKQKLEKYNKKLADAEKVRD 134
EL + + +LEK L A+ D
Sbjct: 3196 AEELAETARIELEKALPALEKAKAAVD 3222
>gi|1723285|sp|Q10218|YAYB_SCHPO HYPOTHETICAL 89.2 KD PROTEIN C4H3.11C IN CHROMOSOME I
>gi|1184024|emb|CAA93350| (Z69380) unknown
[Schizosaccharomyces pombe]
Length = 783
Score = 33.2 bits (74), Expect = 2.5
Identities = 23/107 (21%), Positives = 54/107 (49%), Gaps = 16/107 (14%)
Query: 397 PVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEK 218
PV EQ+++ ++ +K +IL N+ ++ L+++L L ++YN EK
Sbjct: 281 PVASTDEQLFNAHQLLE--------KKFEILKRERNECNAKIDELQDKLELLTDAYNREK 332
Query: 217 KNITELKNLKQK----------------LEKYNKKLADAEKVRDHYTALEIKHEILPHIH 86
+ L+ K +Y+ + E++ +H +L+ ++E + ++
Sbjct: 333 RRARSLEERMSKEMLTKLGESNVDDGMAASRYDTVKREKERLSEHLKSLQEQYEHIQSVY 392
Query: 85 KKI 77
K +
Sbjct: 393 KNV 395
>gi|2688426 (AE001153) B. burgdorferi predicted coding region BB0512 [Borrelia
burgdorferi]
Length = 2166
Score = 33.2 bits (74), Expect = 2.5
Identities = 47/219 (21%), Positives = 97/219 (43%), Gaps = 8/219 (3%)
Query: 721 LASGKIKCIGATTFYEYR--KYIENDQALARRFVKINVPEPTISD-GITILRGLRERFEA 551
L +G I+ + + E + Y ++D+A+ IN I D + +L L ++F+
Sbjct: 732 LKTGDIESLVIEKYKELKDMSYSQSDEAILGIKEFINRQTEIIKDKSVFMLEDLNKKFDD 791
Query: 550 HHGVKISD----DALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTML 383
+ IS D + K + I N D+ + + + +N+ Q L
Sbjct: 792 KNNFVISKIEECDYKLKDFKIESEDILNNFKSDLNEFIESKLQIVSNIKSDNQKQIDDFL 851
Query: 382 KEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNE-LIPLEESYNEEKKNIT 206
+ +I + + + +D +++N++ + +ENL + + L+ +E I
Sbjct: 852 DRISKDILNRKDSINNEVDSKLSD-WQSKLNEITVKIENLLSSGKVDLDLIDSEVTTKIK 910
Query: 205 ELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELE 65
ELK + LE Y + D + + + E+ +I+ H +K+ ELE
Sbjct: 911 ELKFSIESLESYYLEKIDEFRNQGAIYSDELLQDIMNHFNKETRELE 957
Score = 33.2 bits (74), Expect = 2.5
Identities = 31/95 (32%), Positives = 46/95 (47%), Gaps = 4/95 (4%)
Query: 418 NLENESQPVTMLKEQMW-SVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPL 242
+L N + V LKE+ + +V +K +E D+ DLKI E LK L
Sbjct: 1406 DLNNVEKDVIRLKEESYHNVSSHLKLLEEDF-----------FKDLKIRGEELKYSLENF 1454
Query: 241 EESYNEEKKNITE--LKNLKQKLEKYNKKLADAE-KVRD 134
SYN++ +N+ KNL+ K E D E K++D
Sbjct: 1455 IASYNDKIQNLEYDLSKNLENKTELIQSFRLDIEQKMKD 1493
Score = 31.7 bits (70), Expect = 7.3
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 31/148 (20%)
Query: 454 DLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYE-------REKTDILAAR 296
D +DS NL+ + + K Q+ EL++K + D E +E +R
Sbjct: 1053 DRIDSLSKGMDENLQKLKESFDVSKYQVEKFELKVKDLTDDGEAKINKLVKEIEQYYKSR 1112
Query: 295 INDLKIHLENLKNELIPLEESY----NEEKKNITELKNLKQKL-------------EKYN 167
+ + + + N+++ +E + NE K NI L E+Y+
Sbjct: 1113 LEEAIDYRRTIDNDIMQAKERFGEITNELKNNIESKSEFLNDLYKERFKLIESNFEERYS 1172
Query: 166 KKLADAE----KVRDH-YTALEIKHEILPHIHKKISELESIKAVV--TSKDIAEIISRL 11
L ++E K+RD Y L E ++ KISE++ ++ SKDI E L
Sbjct: 1173 TFLIESEGAISKIRDEIYKTLTSNDE---NLQIKISEMDQNFEIIEQRSKDILEFEKEL 1228
Score = 31.3 bits (69), Expect = 9.5
Identities = 48/172 (27%), Positives = 86/172 (49%), Gaps = 35/172 (20%)
Query: 625 KINVPEPTISDGITILRGLRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLV 446
KI E +S + L + F K+ DD F + +K++ S ++ I L+
Sbjct: 1461 KIQNLEYDLSKNLENKTELIQSFRLDIEQKMKDDKENFYLDFTKEFSSKKKDMQSEIALM 1520
Query: 445 DSACSSAI---VNLENESQPVT-----MLKEQM--W------SVELEIKAIEIDYEREKT 314
++ + + V+ N Q + +K+ + W ++E I E+ + +
Sbjct: 1521 ETNITGKVDEFVDFVNNKQSIIDSWFLNIKDDVKDWQEKSYSTIEKRINLAELGIKSFEN 1580
Query: 313 DILAARIN--------DLKIH--LENLKNELIPLEESYNEEKKNITELKNLKQ------- 185
DI +I ++K NL+NE +E+S + + KNI E NLK
Sbjct: 1581 DIFNVKIGLESFKDGFEIKAEEIFSNLQNEAKKIEQSVHLDFKNIGESLNLKVLDLEKFV 1640
Query: 184 --KLEKYNKKLADAEKVRDHYTALEIK 110
KLEK ++K+ +K D E+K
Sbjct: 1641 DFKLEKIDEKV--NKKTEDILIQAEVK 1665
>gi|1363732|pir||S59413 probable membrane protein YLR454w - yeast (Saccharomyces
cerevisiae) >gi|717075 (U22383) Ylr454wp [Saccharomyces
cerevisiae]
Length = 2628
Score = 33.2 bits (74), Expect = 2.5
Identities = 31/138 (22%), Positives = 61/138 (43%), Gaps = 2/138 (1%)
Query: 559 FEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLK 380
+E+H V++ D L +K K + R+ IAI+ + V +L
Sbjct: 522 YESHWNVELLDMKLQHIIKHQKYEHTILRVDSIAIE-----------------EKVQLLP 564
Query: 379 EQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEE--KKNIT 206
+ + S +I + +D T ++ + + + NL ++L +EE+Y +E +K +
Sbjct: 565 DILCSANADIDTLMLDLSELPTMVMLSEL------VHNLDSQLANVEENYFKEFYEKFAS 618
Query: 205 ELKNLKQKLEKYNKKLADAE 146
L+N+K + K L E
Sbjct: 619 NLQNMKAECSNMAKCLRQKE 638
>gi|1079256|pir||S52696 myosin heavy chain - rainbow trout (fragment)
>gi|755771|emb|CAA88724| (Z48794) myosin heavy chain
[Oncorhynchus mykiss]
Length = 698
Score = 33.2 bits (74), Expect = 2.5
Identities = 34/84 (40%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 277 HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEIL 98
HLE LK E L++ +E + I E +LEK KK + EK + TALE L
Sbjct: 257 HLETLKRENKNLQQEISELTEQIGETGKSIHELEK-AKKTVETEK-SEIQTALEEAEGTL 314
Query: 97 PHIHKKI----SELESIKAVVTSKDIAE 26
H KI EL IK V K IAE
Sbjct: 315 EHEESKILRVQLELNQIKGEVDRK-IAE 341
>gi|11067|emb|CAA46548| (X65591) myosin II heavy chain [Schistosoma mansoni]
Length = 528
Score = 33.2 bits (74), Expect = 2.5
Identities = 33/119 (27%), Positives = 66/119 (54%), Gaps = 23/119 (19%)
Query: 418 NLENESQPVTMLKEQMWSVELEIKAIE---IDYEREKTDI------LAARINDLKIHLEN 266
+L + + +T L Q +E IK +E D E + ++ ++A I +LK +E+
Sbjct: 180 SLADAEEKITKLVLQRGDMEQRIKELEERLADEEDQAANLTEVKKKMSAEIEELKKDVED 239
Query: 265 LK--------------NELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHY 128
L+ NE+ L+ ++ + I +L K+ LE+ NK+ +
Sbjct: 240 LESSLQKAEQEKQTKDNEIRTLQSEMAQQDEMIGKLNKDKKNLEEENKRTQE-------- 291
Query: 127 TALEIKHEILPHIHKKISELES 62
AL+ + + + H++K ++LES
Sbjct: 292 -ALQAEEDKVNHLNKLKAKLES 312
>gi|386972 (M21664) alpha-myosin heavy chain [Homo sapiens]
Length = 532
Score = 33.2 bits (74), Expect = 2.5
Identities = 37/146 (25%), Positives = 72/146 (48%), Gaps = 27/146 (18%)
Query: 493 KYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKT 314
K+ + D+ +D+ S ++A ++ + + + + W + E E++ +++
Sbjct: 14 KHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAE---WKQKYEESQSELESSQKEA 70
Query: 313 DILAARINDLKI-------HLENLK-------NELIPLEESYNEEKKNITELKNLKQKLE 176
L+ + LK HLE K E+ L E E KN+ EL+ ++ +LE
Sbjct: 71 RSLSTELFKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGEGGKNVHELEKVRNQLE 130
Query: 175 ----KYNKKLADAEKVRDHYTAL---------EIKHEILPHIHKKISELESIK 56
+ L +AE +H +IK EI ++ +K E+E K
Sbjct: 131 VEKMELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERNVAEKDEEMEQAK 183
>gi|2351223|dbj|BAA22069| (D89992) myosin heavy chain [Cyprinus carpio]
Length = 1935
Score = 33.2 bits (74), Expect = 2.5
Identities = 38/143 (26%), Positives = 68/143 (46%), Gaps = 11/143 (7%)
Query: 466 DIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARIND 287
D+ ID+ +S NL+ + + + + W + E E++ +++ L+ +
Sbjct: 1428 DLMIDV--ERANSLAANLDKKQRNFDKVLAE-WKQKYEESQAELEGAQKEARSLSTELFK 1484
Query: 286 LKI-------HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHY 128
+K HLE LK E L++ ++ + + E +LEK KK ++EK +
Sbjct: 1485 MKNSYEEALDHLETLKRENKNLQQEISDLTEQLGETGKSIHELEK-AKKTVESEK-SEIQ 1542
Query: 127 TALEIKHEILPHIHKKI----SELESIKAVVTSK 38
TALE L H KI EL +K+ + K
Sbjct: 1543 TALEEAEGTLEHEESKILRVQLELNQVKSEIDRK 1576
Score = 33.2 bits (74), Expect = 2.5
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 21/145 (14%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + E + + E KA++ +++
Sbjct: 952 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MASQDESIAKLTKEKKALQEAHQQTL 1008
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE----------- 176
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 1009 DDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIM 1068
Query: 175 -KYNKKLADAEKVRDH-------YTALEIKHEILPHIHKKISELES 62
N+K EK++ + +E + + + KKI EL++
Sbjct: 1069 DLENEKQQSDEKIKKKDFEISQLLSKIEDEQSLGAQLQKKIKELQA 1114
>gi|3875085|emb|CAB05167| (Z82264) C49C3.15 [Caenorhabditis elegans]
Length = 275
Score = 33.2 bits (74), Expect = 2.5
Identities = 26/111 (23%), Positives = 59/111 (52%), Gaps = 7/111 (6%)
Query: 460 AIDLVDSACSSAIVNLENESQPVTMLKEQM-------WSVELEIKAIEIDYEREKTDILA 302
A+D+ ++ SS+ ++Q +T+L+E++ +S+E +K E + R+ ++
Sbjct: 111 AVDVASTSASSS------DAQELTILREKLKLSEERNFSLETRLKMQEAAFHRKLQEVKN 164
Query: 301 ARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHY 128
+ D+K L+N + +++ + + ELK K ++EK ++ AD + Y
Sbjct: 165 EQDADMKQKYTILENYSVMCKKN---NLQLVAELKEAKCEIEKKTRECADLKMAAAFY 219
>gi|2144825|pir||MWRBCB myosin beta heavy chain, cardiac muscle - rabbit (fragment)
>gi|510178|emb|CAA84369| (Z34886) beta cardiac myosin
heavy chain [Oryctolagus cuniculus]
Length = 1038
Score = 33.2 bits (74), Expect = 2.5
Identities = 31/121 (25%), Positives = 61/121 (49%), Gaps = 3/121 (2%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAA--RINDLKIHLENLKNELIPL 242
++N ++ + L E + + E KA++ +++ D+ A ++N L L+ ++ L
Sbjct: 612 VKNLTEEMAGLDEIIAKITKEKKALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQVDDL 671
Query: 241 EESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALE-IKHEILPHIHKKISELE 65
E S +EKK +L+ K+KLE D + ++ LE K ++ + KK EL
Sbjct: 672 EGSLEQEKKVRMDLERAKRKLE------GDLKLTQESIMDLENDKQQLDERLKKKDFELN 725
Query: 64 SIKA 53
++ A
Sbjct: 726 ALNA 729
>gi|1082050|dbj|BAA09505| (D55635) p93dis1 [Schizosaccharomyces pombe]
>gi|3169084|emb|CAA19278| (AL023705) hypothetical
protein [Schizosaccharomyces pombe]
Length = 882
Score = 33.2 bits (74), Expect = 2.5
Identities = 30/104 (28%), Positives = 51/104 (48%), Gaps = 1/104 (0%)
Query: 355 EIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
+++ E ERE+ L INDL+I +K ++ E + ++++ IT L+N K +L
Sbjct: 705 QVQEAEDALERER---LFREINDLQIQNAEMKEQVYEKESTISQKEVEITSLRNEKDRLS 761
Query: 175 -KYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVT 44
+ + L + EK H T +E I K+ E +I V T
Sbjct: 762 TRLQQVLLELEK--QHET-----NEEAMDIDLKVPESGAIGRVTT 799
>gi|3874634|emb|CAA92288| (Z68159) Similarity to Yeast DNA repair protein RAD50
(SW:RA50_YEAST); cDNA EST EMBL:D37313 comes from this
gene; cDNA EST EMBL:D34285 comes from this gene
[Caenorhabditis elegans]
Length = 523
Score = 33.2 bits (74), Expect = 2.5
Identities = 31/125 (24%), Positives = 60/125 (47%), Gaps = 1/125 (0%)
Query: 379 EQMWSVELEIKAIEIDYEREKTDILAARIN-DLKIHLENLKNELIPLEESYNEEKKNITE 203
E+M+ ++ + +E +Y E IN +LK+ +ENL N + E Y + +
Sbjct: 272 EEMYKIKRKYSTLE-EYSEE--------INWELKLKVENLGNLEMNFETVYQDLQTANDN 322
Query: 202 LKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDIAEI 23
++ K + +KL + +K + EIK + L KKI EL+ + V ++I ++
Sbjct: 323 MEKYKSSESERIQKLLEEQKA-EILKEEEIKRKELSEQIKKIQELKDRQNVEKDREIEDL 381
Query: 22 ISRLTR 5
++ R
Sbjct: 382 KEKIGR 387
>gi|497649 (U09251) seryl-tRNA synthetase [Mycoplasma genitalium]
Length = 125
Score = 33.2 bits (74), Expect = 2.5
Identities = 24/81 (29%), Positives = 40/81 (48%), Gaps = 3/81 (3%)
Query: 298 RINDLKIHLENLKNELIPLEESYNEE-KKNITELKNLKQKLEKYNKKLADAEKVRDH--Y 128
R N ++ L N K L+ + + ++ KK + E K LKQK+E N D++ +
Sbjct: 39 RKNLQQLELANQKQSLLAKQVAKQKDNKKLLAESKELKQKIENLNNAYKDSQNISQDLLL 98
Query: 127 TALEIKHEILPHIHKKISELESIK 56
I HE +P + + LE +K
Sbjct: 99 NFPNIAHESVPVGKNESANLELLK 122
>gi|3776579 (AC005388) Strong similarity to F22O13.22 gi|3063460 myosin homolog
from A. thaliana BAC gb|AC003981. [Arabidopsis thaliana]
Length = 1556
Score = 33.2 bits (74), Expect = 2.5
Identities = 27/103 (26%), Positives = 57/103 (55%), Gaps = 9/103 (8%)
Query: 361 ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEE-KKNITELKNLKQ 185
+L++ + E +E D+L ++ +L + K + LEE N+E KK + L+ +++
Sbjct: 922 QLKMASRETGALKEAKDMLEKKVEELTYRAQLEKRSRVDLEEEKNQEIKKLQSSLEEMRK 981
Query: 184 KLEKYN----KKLADAEKVRDHYTALEIKHEILPHIHKKI----SELESIKA 53
K+++ N K+ A+K + + + ++L +KI E+E +KA
Sbjct: 982 KVDETNGLLVKEREAAKKAIEEAPPVVTETQVLVEDTQKIEALTEEVEGLKA 1033
>gi|382658|prf||1819485A CENP-E protein [Homo sapiens]
Length = 2663
Score = 33.2 bits (74), Expect = 2.5
Identities = 25/118 (21%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Query: 385 LKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNIT 206
L++ + SV E + ++ D +E ++ +L++ + LK + + + N K
Sbjct: 1055 LQQMLESVIAEKEQLKTDL-KENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEG 1113
Query: 205 ELKNLKQKLEKYNKKLAD-AEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDI 32
EL +L + +KL + ++++++ L E + + KKI+E+E++K + +K++
Sbjct: 1114 ELSRTCDRLAEVEEKLKEKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKEL 1172
Score = 32.5 bits (72), Expect = 4.2
Identities = 31/109 (28%), Positives = 53/109 (48%)
Query: 424 IVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIP 245
IVNL E+ + EL K E+ +EKT + R+N+++ E L+N P
Sbjct: 847 IVNLSKEADKFDSSLGAL-KTELSYKTQEL---QEKTREVQERLNEMEQLKEQLENRDSP 902
Query: 244 LEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEIL 98
L ++ EK ITE L+Q LE+ + + ++ +L+I+ + L
Sbjct: 903 L-QTVEREKTLITE--KLQQTLEEVKTLTQEKDDLKQLQESLQIERDQL 948
Score = 32.5 bits (72), Expect = 4.2
Identities = 30/121 (24%), Positives = 62/121 (50%), Gaps = 1/121 (0%)
Query: 418 NLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLE 239
NL + + + ++Q+ E KA +++ ++E + AR+ K H E + L
Sbjct: 1893 NLRRVEETLKLERDQLKESLQETKARDLEIQQE---LKTARMLS-KEHKETVDK----LR 1944
Query: 238 ESYNEEKKNITEL-KNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES 62
E +E+ I+++ K+L + ++ KK+ + +K L +K ++ HKKI+E+E
Sbjct: 1945 EKISEKTIQISDIQKDLDKSKDELQKKIQELQK--KELQLLRVKEDVNMS-HKKINEMEQ 2001
Query: 61 IK 56
+K
Sbjct: 2002 LK 2003
Score = 32.1 bits (71), Expect = 5.6
Identities = 35/123 (28%), Positives = 68/123 (54%), Gaps = 19/123 (15%)
Query: 385 LKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEE----- 221
LKE+ S +L+ K ++ +E+ + +IN+++ LKN+ + LE E
Sbjct: 1129 LKEK--SQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQ 1186
Query: 220 --KKNITELKNLKQKLEKYNKKLADAEKVRDHY---------TALEIKHEI-LPHIHKKI 77
+N E+K++ ++ + + E RDH T L+ K E+ + HIH K
Sbjct: 1187 KLNENYEEVKSITKERKVLKELQKSFETERDHLRGYIREIEATGLQTKEELKIAHIHLKE 1246
Query: 76 SE--LESIKAVVTSKDIAEIIS 17
+ ++ ++ V+ K A+II+
Sbjct: 1247 HQETIDELRRSVSEK-TAQIIN 1267
>gi|1399885 (U59751) ORF 4 [Cassava vein mosaic virus]
Length = 392
Score = 33.2 bits (74), Expect = 2.5
Identities = 24/114 (21%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 400 QPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEE 221
+ + +++ + + I+ IE + E ++ L + + K+H EN++ +E+ +
Sbjct: 10 EKLNTIEKNISETNIRIEKIEKEQELKRKVELYGKEPEKKLHKENIEKLSSSIEDKIIQN 69
Query: 220 -KKNITELKNLKQKLE-----KYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESI 59
K + +++N++++ + K NK L+ EK +++ + + L H K+ EL S+
Sbjct: 70 IDKKLKKIENVEEQYQWKNIVKINKPLSVGEKYMENFKKILV---YLGEKHPKLEELYSL 126
>gi|3845309 (AE001424) RESA-H3 antigen [Plasmodium falciparum]
Length = 1558
Score = 33.2 bits (74), Expect = 2.5
Identities = 57/270 (21%), Positives = 129/270 (47%), Gaps = 17/270 (6%)
Query: 868 QFEERFKSLVKQIESDDKSILFVDEFHTMVSAGASNEGSLDCTNMLKPSLASGKIKCIGA 689
+ E+ S+++++E + +L ++ + E S++ ++ K S K K
Sbjct: 909 EVEKETVSIIEEMEENIVDVLEEEKEDLTDKMIDAVEESIEISSDSKEETESIKDKEKDV 968
Query: 688 TTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKISDDALVFA 509
+ E + + D+++ + N+ E + D + I + E + + L+
Sbjct: 969 SLVVEEVQDNDMDESVEKVLELKNMEEELMKDAVEINDITSKLIEETQELNEVEADLIKD 1028
Query: 508 VKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDY 329
++ K+ + L + + +++D+ + +E E T L E VEL+ D
Sbjct: 1029 MEKLKEL--EKALSEDSKEIIDAKDDTLEKVIEEEHDITTTLDEV---VELK------DV 1077
Query: 328 EREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNL-------KQKLEK- 173
E +K + +++DLK E++ E+ ++E +E ++ ELK + K+++EK
Sbjct: 1078 EEDKIE----KVSDLKDLEEDILKEVKEIKELESEILEDYKELKTIETDILEEKKEIEKD 1133
Query: 172 -YNKKLADAEKVRD-------HYTALEIKHE-ILPHIHKKISELESI 59
+ K +AE+++D ++LE++ E L +H+ E+E I
Sbjct: 1134 HFEKFEEEAEEIKDLEADILKEVSSLEVEEEKKLEEVHELKEEVEHI 1180
>gi|1045294|emb|CAA91434| (Z66527) cardiac tropomyosin [Salmo trutta]
Length = 284
Score = 33.2 bits (74), Expect = 2.5
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 340 EIDYEREKTDILAARINDLKIHLENLKNELIPLE---ESYNE-EKKNITELKNLKQKLEK 173
E++ E+ ++ + +DL+ L+N+ N L LE E Y+E E K E+K L KL++
Sbjct: 175 ELERAEERAEVSELKCSDLEEELKNVTNNLKSLEASSEKYSEKEDKYEEEIKVLSDKLKE 234
Query: 172 YNKKLADAEK 143
+ AE+
Sbjct: 235 AETRAEFAER 244
>gi|1055047 (U39849) weakly similar to myosin heavy chain [Caenorhabditis
elegans]
Length = 479
Score = 33.2 bits (74), Expect = 2.5
Identities = 43/191 (22%), Positives = 93/191 (48%), Gaps = 13/191 (6%)
Query: 580 LRGLRERFEAHHGVKISDDALVFAVKS--------SKKYISNRRLPDIAIDLVDSACSSA 425
LR L + + + DAL+ +++S +K++ + +P+ D +S S
Sbjct: 59 LRDLHVEMDGKNATILDRDALIDSLRSEIDKLEKINKEFANGSVIPEH--DDSNSFGESE 116
Query: 424 IVNLENESQP----VTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKN 257
++ + + Q T L E+ + ELE +A+ + +++ + + I DLK H+E
Sbjct: 117 MLRISEDCQKYKETATALYER--NAELEKEAVNL---KDEIESMMDHIRDLKNHMETRDE 171
Query: 256 ELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKI 77
E+ LE +E +N E K + +++ + KV + L ++ L + K++
Sbjct: 172 EIARLEGELFDE-RNSHEGKLAARGNSMFSEVIDAERKVEEDLKVLHGENRALKGMVKRL 230
Query: 76 -SELESIKAVVTSKDIAEIISRLT 8
E+E ++ + S ++R+T
Sbjct: 231 RMEVEEVEERLRSSTKRFNVTRMT 254
>gi|2194144 (AC002062) F20P5.8 [Arabidopsis thaliana]
Length = 510
Score = 33.2 bits (74), Expect = 2.5
Identities = 32/130 (24%), Positives = 65/130 (49%), Gaps = 6/130 (4%)
Query: 499 SKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYERE 320
S++ + R + D + + S+ S+ + + +S T LK + V+ EI+ ++E
Sbjct: 324 SEEEVDEREVEDDERNHISSSIESSPIEMTRDSN--TKLKFEKQVVKREIR----EHEEL 377
Query: 319 KTDILAARIND-----LKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA 155
+T +++ ++N + HL++ ++E E N+E E + + LE N L+
Sbjct: 378 ETPLVSFQVNKSEEAAAETHLDDEQSEEAVAETLLNDELDGDDEEEVAEDNLEPLNSSLS 437
Query: 154 DAEKVR-DHYTALEIK 110
+E+ R D LE K
Sbjct: 438 SSEENRVDRIRRLEQK 453
>gi|422336|pir||S33068 myosin heavy chain - fluke (Schistosoma mansoni) (fragment)
Length = 527
Score = 33.2 bits (74), Expect = 2.5
Identities = 33/119 (27%), Positives = 66/119 (54%), Gaps = 23/119 (19%)
Query: 418 NLENESQPVTMLKEQMWSVELEIKAIE---IDYEREKTDI------LAARINDLKIHLEN 266
+L + + +T L Q +E IK +E D E + ++ ++A I +LK +E+
Sbjct: 180 SLADAEEKITKLVLQRGDMEQRIKELEERLADEEDQAANLTEVKKKMSAEIEELKKDVED 239
Query: 265 LK--------------NELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHY 128
L+ NE+ L+ ++ + I +L K+ LE+ NK+ +
Sbjct: 240 LESSLQKAEQEKQTKDNEIRTLQSEMAQQDEMIGKLNKDKKNLEEENKRTQE-------- 291
Query: 127 TALEIKHEILPHIHKKISELES 62
AL+ + + + H++K ++LES
Sbjct: 292 -ALQAEEDKVNHLNKLKAKLES 312
>gi|3452562|dbj|BAA32478| (AB007689) Vesl-2 [Rattus norvegicus]
Length = 354
Score = 32.8 bits (73), Expect = 3.2
Identities = 33/108 (30%), Positives = 53/108 (48%), Gaps = 3/108 (2%)
Query: 361 ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK 182
ELE + EI+ E+EK L RI +L+ + + EL L + + ++E + + +K
Sbjct: 231 ELEEQCGEINREKEKNTQLKRRIEELESEVREKEMELKDLRKQSEIIPQLMSECEYVSEK 290
Query: 181 L---EKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSK 38
L E+ N+ L D KVR T +E H+ EL+S V+ K
Sbjct: 291 LEAAERDNQNLED--KVRSLKTDIEESKYRQRHLK---GELKSFLEVLDGK 336
Score = 31.7 bits (70), Expect = 7.3
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 412 ENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLK-----IHLENLKNELI 248
E+ ++ T L+E SVE + I R++ D L ++I +L+ I+ E KN +
Sbjct: 192 ESNARLTTALQESAASVEQWKRQFSIC--RDENDRLRSKIEELEEQCGEINREKEKNTQL 249
Query: 247 P--LEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALE 116
+EE +E ++ ELK+L+++ E + +++ E V + A E
Sbjct: 250 KRRIEELESEVREKEMELKDLRKQSEIIPQLMSECEYVSEKLEAAE 295
>gi|805099 (U22018) P120 [Mycoplasma hominis]
Length = 232
Score = 32.8 bits (73), Expect = 3.2
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 367 SVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLK 188
+ E+E K +ID + K + N L+ L+ K+E+I ++ I EL+ K
Sbjct: 92 NAEIEAKYKDIDAQNLKIKTAEEKNNKLQKELKTKKDEIIKKTSEKSKLDLKIAELETNK 151
Query: 187 QK-----------LEKYNKKLADAEKVRDHYTAL 119
K LE NK+ AD+ K D + L
Sbjct: 152 NKVSEQIDANKKELEALNKEYADSVKKSDELSKL 185
Score = 32.5 bits (72), Expect = 4.2
Identities = 35/98 (35%), Positives = 51/98 (51%), Gaps = 26/98 (26%)
Query: 307 LAARINDLKIHLENLKNELIP------------------LEESYNEEKKNITELKNLKQK 182
L + +DLK LENL EL+P ++ E KN T+L LK +
Sbjct: 12 LEQKNDDLKDQLENLSKELVPSRMQSRSLEGKIKTSSEKAKQLEQELTKNETDLGGLKSQ 71
Query: 181 LEKYNKKLADAEKVR---DHYTALEIKHEILPHIHKKISELES-----IKAVVTSKDIAE 26
L+K N+ L K +E K++ + + KI E K + T KD E
Sbjct: 72 LDKLNEDLKALNKANTDGSKNAEIEAKYKDIDAQNLKIKTAEEKNNKLQKELKTKKD--E 129
Query: 25 IISR 14
II +
Sbjct: 130 IIKK 133
>gi|3256949|dbj|BAA29632| (AP000002) 318aa long hypothetical protein [Pyrococcus horikoshii]
Length = 318
Score = 32.8 bits (73), Expect = 3.2
Identities = 28/96 (29%), Positives = 55/96 (57%), Gaps = 27/96 (28%)
Query: 424 IVNLENESQPVTMLKEQMWSVELE---------IKAIEIDYER----------------- 323
+ N+E V+ L+E+M S +E IK++E E
Sbjct: 116 VANVEKVLPRVSELEERMLSFPIEVAESLEKRLIKSLEKKVEELVEEKVGKANNINLKEF 175
Query: 322 -EKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAE 146
+K D L +LK LEN + + L + + ++++ E++ +++K+ +Y K D +
Sbjct: 176 LDKYDSLVRENVELKRKLENRERIIRELRDKLAKMQESVKEVEEIEKKVSEYGKLAEDMK 235
Query: 145 KVR 137
+VR
Sbjct: 236 EVR 238
>gi|3327124|dbj|BAA31630| (AB014555) KIAA0655 protein [Homo sapiens]
Length = 1083
Score = 32.8 bits (73), Expect = 3.2
Identities = 31/137 (22%), Positives = 70/137 (50%), Gaps = 13/137 (9%)
Query: 421 VNLENESQPVTMLKEQMWSVELE-----------IKAIEIDYEREKTDILAARINDLKIH 275
+ +E+ + V ML+ ++ ++LE + A+E + E ++ A +++
Sbjct: 369 LQIESLKREVEMLRSELEKIKLEAQRYIAQLKSQVNALEGELEEQRKQKQKALVDN---- 424
Query: 274 LENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILP 95
E L++EL L + E +++ Q L + ++ A A + R Y L+ KH L
Sbjct: 425 -EQLRHELAQLRAAQLEGERS--------QGLREEAERKASATEAR--YNKLKEKHSELV 473
Query: 94 HIHKKI--SELESIKAVVTSKDIAEIISRL 11
H+H ++ ++ K + ++ E ++R+
Sbjct: 474 HVHAELLRKNADTAKQLTVTQQSQEEVARV 503
>gi|136099|sp|P02561|TPMP_HORSE TROPOMYOSIN BETA CHAIN, PLATELET >gi|71604|pir||TMHOBP tropomyosin
beta chain, platelet - horse
Length = 247
Score = 32.8 bits (73), Expect = 3.2
Identities = 22/66 (33%), Positives = 37/66 (55%), Gaps = 4/66 (6%)
Query: 340 EIDYEREKTDILAARINDLKIHLENLKNELIPLE---ESYNE-EKKNITELKNLKQKLEK 173
E++ E+ ++ + DL+ L+N+ N L LE E Y+E E K E+K L KL++
Sbjct: 138 ELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLLSDKLKE 197
Query: 172 YNKKLADAEK 143
+ AE+
Sbjct: 198 AETRAEFAER 207
>gi|2496434|sp|P75159|Y438_MYCPN HYPOTHETICAL PROTEIN MG438 HOMOLOG >gi|2146462|pir||S73530 MG438
homolog E30_orf375 - Mycoplasma pneumoniae (SGC3) (ATCC
29342) >gi|1673868 (AE000020) Mycoplasma pneumoniae,
MG438 homolog, from M. genitalium [Mycoplasma
pneumoniae]
Length = 375
Score = 32.8 bits (73), Expect = 3.2
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 364 VELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ 185
++L+ + + EK LA+ I L +LK+ IPL +S +++ L
Sbjct: 99 IDLKFAYYALKSQEEKITSLASGTTIKNIRLSDLKDLPIPLVKSIQDQRTIAHALSVFDL 158
Query: 184 KLEKYNKKLADAEKVRDHYT----ALE---IKHEILPHIHKKISEL 68
++E N+ + K+RD Y L+ + H L +H+++ E+
Sbjct: 159 RIEHLNELIEVNRKLRDEYAHKLFTLDPDFLTHWNLHELHEQMGEI 204
>gi|3452564|dbj|BAA32479| (AB007690) Vesl-2(delta 11) [Rattus norvegicus]
Length = 343
Score = 32.8 bits (73), Expect = 3.2
Identities = 33/108 (30%), Positives = 53/108 (48%), Gaps = 3/108 (2%)
Query: 361 ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK 182
ELE + EI+ E+EK L RI +L+ + + EL L + + ++E + + +K
Sbjct: 220 ELEEQCGEINREKEKNTQLKRRIEELESEVREKEMELKDLRKQSEIIPQLMSECEYVSEK 279
Query: 181 L---EKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSK 38
L E+ N+ L D KVR T +E H+ EL+S V+ K
Sbjct: 280 LEAAERDNQNLED--KVRSLKTDIEESKYRQRHLK---GELKSFLEVLDGK 325
Score = 31.7 bits (70), Expect = 7.3
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 412 ENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLK-----IHLENLKNELI 248
E+ ++ T L+E SVE + I R++ D L ++I +L+ I+ E KN +
Sbjct: 181 ESNARLTTALQESAASVEQWKRQFSIC--RDENDRLRSKIEELEEQCGEINREKEKNTQL 238
Query: 247 P--LEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALE 116
+EE +E ++ ELK+L+++ E + +++ E V + A E
Sbjct: 239 KRRIEELESEVREKEMELKDLRKQSEIIPQLMSECEYVSEKLEAAE 284
>gi|3721836|dbj|BAA33713| (AB013384) HIP3 [Homo sapiens]
Length = 890
Score = 32.8 bits (73), Expect = 3.2
Identities = 31/137 (22%), Positives = 70/137 (50%), Gaps = 13/137 (9%)
Query: 421 VNLENESQPVTMLKEQMWSVELE-----------IKAIEIDYEREKTDILAARINDLKIH 275
+ +E+ + V ML+ ++ ++LE + A+E + E ++ A +++
Sbjct: 176 LQIESLKREVEMLRSELEKIKLEAQRYIAQLKSQVNALEGELEEQRKQKQKALVDN---- 231
Query: 274 LENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILP 95
E L++EL L + E +++ Q L + ++ A A + R Y L+ KH L
Sbjct: 232 -EQLRHELAQLRAAQLEGERS--------QGLREEAERKASATEAR--YNKLKEKHSELV 280
Query: 94 HIHKKI--SELESIKAVVTSKDIAEIISRL 11
H+H ++ ++ K + ++ E ++R+
Sbjct: 281 HVHAELLRKNADTAKQLTVTQQSQEEVARV 310
>gi|3845121 (AE001380) hypothetical protein [Plasmodium falciparum]
Length = 696
Score = 32.8 bits (73), Expect = 3.2
Identities = 38/147 (25%), Positives = 71/147 (47%), Gaps = 11/147 (7%)
Query: 505 KSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYE 326
K +K+ I N+R + + + ++N+ + + M E +IK I +YE
Sbjct: 315 KKNKRNIKNKRN-------IKNYLKNELINIHKKGSKKNYIN--MKEFEDKIKEIHNEYE 365
Query: 325 REKTDILAAR----------INDLKIHLENLKNELIPLEESYNEEKKNITELKN-LKQKL 179
+ DI+ I+++ + N+KNELI + +E NI E N LK++L
Sbjct: 366 LKYDDIIKQYDEDDIRKKKLIDNIYMKYMNMKNELIKTQ----KEIINIKEENNKLKEEL 421
Query: 178 EKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELE 65
+ +++ ++ V + LE + H KI +LE
Sbjct: 422 KITPERIIESNIVDSYKNKLEEYIFLTRHKDLKIKKLE 459
>gi|4507651|oth|NP_003281|PTPM4 tropomyosin 4 >gi|136095|sp|P07226|TPM4_HUMAN TROPOMYOSIN,
FIBROBLAST NON-MUSCLE TYPE (TM30-PL)
>gi|107978|pir||S07282 tropomyosin TM30-pl, fibroblast -
human >gi|37202|emb|CAA28888| (X05276) tropomyosin (AA
1-248) [Homo sapiens] >gi|3661527 (AF087679) tropomyosin
4 [Sus scrofa]
Length = 248
Score = 32.8 bits (73), Expect = 3.2
Identities = 22/66 (33%), Positives = 37/66 (55%), Gaps = 4/66 (6%)
Query: 340 EIDYEREKTDILAARINDLKIHLENLKNELIPLE---ESYNE-EKKNITELKNLKQKLEK 173
E++ E+ ++ + DL+ L+N+ N L LE E Y+E E K E+K L KL++
Sbjct: 139 ELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLLSDKLKE 198
Query: 172 YNKKLADAEK 143
+ AE+
Sbjct: 199 AETRAEFAER 208
>gi|136081|sp|P09495|TPM4_RAT TROPOMYOSIN 4, EMBRYONIC FIBROBLAST ISOFORM (TM-4)
>gi|112445|pir||S10623 tropomyosin 4, fibroblast - rat
>gi|207504 (J02780) tropomyosin TM4 [Rattus norvegicus]
>gi|763182|emb|CAA68360| (Y00169) fibroblast tropomyosin
4 [Rattus norvegicus]
Length = 248
Score = 32.8 bits (73), Expect = 3.2
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 340 EIDYEREKTDILAARINDLKIHLENLKNELIPLE---ESYNE-EKKNITELKNLKQKLEK 173
E++ E+ ++ + +DL+ L+N+ N L LE E Y+E E K E+K L KL++
Sbjct: 139 ELERAEERAEVSELKSSDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLLSDKLKE 198
Query: 172 YNKKLADAEK 143
+ AE+
Sbjct: 199 AETRAEFAER 208
>gi|127772|sp||MYSS_RABIT_2 [Segment 2 of 2] MYOSIN HEAVY CHAIN, SKELETAL MUSCLE
Length = 826
Score = 32.8 bits (73), Expect = 3.2
Identities = 42/162 (25%), Positives = 75/162 (45%), Gaps = 8/162 (4%)
Query: 511 AVKSSKKYISNRRLPDIAIDLVDS--ACSSAIVNLENESQPVTMLKEQMWSVELEIKAIE 338
+++ +K+ + N D+ ID+ S C+ N + + K + + E++A +
Sbjct: 304 SLEKTKQRLQNEA-EDLMIDVERSNATCARMDKKQRNFDKVLAEWKHKYEETQAELEASQ 362
Query: 337 IDYEREKTDILAAR--INDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNK 164
+ T++ + + HLE LK E L++ ++ + I E +LEK K
Sbjct: 363 KESRSLSTEVFKVKNAYEESLDHLETLKRENKNLQQEISDLTEQIAESAKHIHELEKVKK 422
Query: 163 KLADAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSKDIAE 26
++ D EK + ALE L H KI EL +K+ + K IAE
Sbjct: 423 QI-DQEK-SELQAALEEAEGSLEHEEGKILRIQLELNQVKSEIDRK-IAE 469
>gi|3767594|dbj|BAA33857| (AB015195) Eprh [Staphylococcus aureus]
Length = 414
Score = 32.8 bits (73), Expect = 3.2
Identities = 20/67 (29%), Positives = 38/67 (55%), Gaps = 7/67 (10%)
Query: 340 EIDYEREKTDILAARIND----LKIHLENLKNELIPLEESYNE---EKKNITELKNLKQK 182
EI ++ I +N+ LKI L ++NE++ + + NE KKN ++L L +
Sbjct: 229 EIYKDKAMLKIACINLNEYQDKLKIQLLKIENEMMTVNRALNENPNSKKNKSKLNQLNMQ 288
Query: 181 LEKYNKKLADAEKV 140
L N +++ E++
Sbjct: 289 LSSINNRISKTEEL 302
>gi|3845250 (AE001411) ATP-dept. acyl-CoA synthetase (TP) [Plasmodium
falciparum]
Length = 885
Score = 32.8 bits (73), Expect = 3.2
Identities = 20/53 (37%), Positives = 32/53 (59%), Gaps = 1/53 (1%)
Query: 328 EREKTDILAARINDLKIHL-ENLKNELIPLEESYNEEKKNITELKNLKQKLEKY 170
ER+K+++ +K H+ L E I LE+ +EKK I +LK LK++ +KY
Sbjct: 362 ERKKSNMKRKESKWIKKHMYPKLIYENIDLEDICEDEKKKIEKLKYLKEEAKKY 415
>gi|730978|sp|P40414|TPM2_YEAST TROPOMYOSIN 2 >gi|626957|pir||S48396 tropomyosin TPM2 - yeast
(Saccharomyces cerevisiae) >gi|557785|emb|CAA86140|
(Z38059) tropomyosin [Saccharomyces cerevisiae]
Length = 161
Score = 32.8 bits (73), Expect = 3.2
Identities = 26/81 (32%), Positives = 43/81 (52%), Gaps = 9/81 (11%)
Query: 385 LKEQMWSVELEIKAIEIDYE--REKTDILAA-------RINDLKIHLENLKNELIPLEES 233
+KE++ S++LE ++ + YE RE+ L I L E L +E+ LE
Sbjct: 4 IKEKLNSLKLESESWQEKYEELREQLKELEQSNTEKENEIKSLSAKNEQLDSEVEKLESQ 63
Query: 232 YNEEKKNITELKNLKQKLEKYNKKLADAEK 143
++ K+ + NL+ E Y KK D E+
Sbjct: 64 LSDTKQLAEDSNNLRSNNENYTKKNQDLEQ 93
>gi|4490753|emb|CAB38915| (AL035708) putative protein [Arabidopsis thaliana]
Length = 615
Score = 32.8 bits (73), Expect = 3.2
Identities = 45/151 (29%), Positives = 76/151 (49%), Gaps = 19/151 (12%)
Query: 502 SSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYER 323
+S +Y SN+ + DI +L S LEN V LK+++ ++ IK +E
Sbjct: 13 ASPRYSSNK-VADIGTELYKMKAS-----LENRENEVVSLKQELLKKDIFIKNLE----- 61
Query: 322 EKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE-KYNKKLADAE 146
AA K L++ K++ LEE+ +++ E+ +LK+K++ YN + + E
Sbjct: 62 ------AAE----KKLLDSFKDQSRELEETKALVEESKVEIASLKEKIDTSYNSQDSSEE 111
Query: 145 KVRDH----------YTALEIKHEILPHIHK-------KISE-LESIKAV 50
D T +E E L H+ K+SE LE +K+V
Sbjct: 112 DEDDSSVQDFDIESLKTEMESTKESLAQAHEAAQASSLKVSELLEEMKSV 161
>gi|90095|pir||S00084 myosin heavy chain, fast skeletal muscle - rabbit (fragment)
>gi|1364242|emb|CAA29391| (X05958) MHC (676 AA)
[Oryctolagus cuniculus]
Length = 676
Score = 32.8 bits (73), Expect = 3.2
Identities = 42/162 (25%), Positives = 75/162 (45%), Gaps = 8/162 (4%)
Query: 511 AVKSSKKYISNRRLPDIAIDLVDS--ACSSAIVNLENESQPVTMLKEQMWSVELEIKAIE 338
+++ +K+ + N D+ ID+ S C+ N + + K + + E++A +
Sbjct: 154 SLEKTKQRLQNEA-EDLMIDVERSNATCARMDKKQRNFDKVLAEWKHKYEETQAELEASQ 212
Query: 337 IDYEREKTDILAAR--INDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNK 164
+ T++ + + HLE LK E L++ ++ + I E +LEK K
Sbjct: 213 KESRSLSTEVFKVKNAYEESLDHLETLKRENKNLQQEISDLTEQIAESAKHIHELEKVKK 272
Query: 163 KLADAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSKDIAE 26
++ D EK + ALE L H KI EL +K+ + K IAE
Sbjct: 273 QI-DQEK-SELQAALEEAEGSLEHEEGKILRIQLELNQVKSEIDRK-IAE 319
>gi|1216293 (L35239) cardiac tropomyosin [Xenopus laevis]
Length = 284
Score = 32.8 bits (73), Expect = 3.2
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 340 EIDYEREKTDILAARINDLKIHLENLKNELIPLE---ESYNE-EKKNITELKNLKQKLEK 173
E++ E+ ++ + +DL+ L+N+ N L LE E Y+E E K E+K L KL++
Sbjct: 175 ELERAEERAEVSELKCSDLEEELKNVTNNLKSLEAQSEKYSEKEDKYEEEIKILTDKLKE 234
Query: 172 YNKKLADAEK 143
+ AE+
Sbjct: 235 AETRAEFAER 244
>gi|1707140 (U80836) weak similarity to S. cerevisiae NUF1 (GI:849173)
[Caenorhabditis elegans]
Length = 380
Score = 32.8 bits (73), Expect = 3.2
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 388 MLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNEL-IPLEESYNEEKKN 212
+LKE + ++LE+K + D ER I AA K LE ++ E + L ES +++
Sbjct: 279 VLKEHIRQIDLELKNKQSDMERALLQISAAEQKAAKKELELIEAEKHLKLYESRLSDRER 338
Query: 211 ITELKN-----LKQKLEKYNKKLADAEKVRDHYTAL 119
KN LK L+ + L E++R+ +L
Sbjct: 339 DLNAKNLEIDRLKLDLDAARRNLQKLEQMREAMLSL 374
>gi|3845128 (AE001381) hypothetical protein [Plasmodium falciparum]
Length = 508
Score = 32.8 bits (73), Expect = 3.2
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Query: 505 KSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSV--ELEIKAIEID 332
K KK I N + I + S ++ E + L++ + + ++K E
Sbjct: 287 KEKKKSIENMNISHIIYEKEQSHDICNVLEENKEEEKYNNLQKDVITNCNNDKVKLEEYH 346
Query: 331 YEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLAD 152
+E+E ++ IND+ I K E ++ + KKN E KN K++ EK KK +
Sbjct: 347 HEKELNNVQI--INDMDIKKNEAKKEKNNKKKEKQKNKKNEKE-KNKKKEKEKNKKKEKE 403
Query: 151 AEKVRD 134
K ++
Sbjct: 404 KNKKKE 409
>gi|587474|emb|CAA55207| (X78450) membrane protein [Mycoplasma hominis]
Length = 1079
Score = 32.8 bits (73), Expect = 3.2
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 367 SVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLK 188
+ E+E K +ID + K + N L+ L+ K+E+I ++ I EL+ K
Sbjct: 203 NAEIEAKYKDIDAQNLKIKTAEEKNNKLQKELKTKKDEIIKKTSEKSKLDLKIAELETNK 262
Query: 187 QK-----------LEKYNKKLADAEKVRDHYTAL 119
K LE NK+ AD+ K D + L
Sbjct: 263 NKVSEQIDANKKELEALNKEYADSVKKSDELSKL 296
Score = 32.5 bits (72), Expect = 4.2
Identities = 35/98 (35%), Positives = 51/98 (51%), Gaps = 26/98 (26%)
Query: 307 LAARINDLKIHLENLKNELIP------------------LEESYNEEKKNITELKNLKQK 182
L + +DLK LENL EL+P ++ E KN T+L LK +
Sbjct: 123 LEQKNDDLKDQLENLSKELVPSRMQSRSLEGKIKTSSEKAKQLEQELTKNETDLGGLKSQ 182
Query: 181 LEKYNKKLADAEKVR---DHYTALEIKHEILPHIHKKISELES-----IKAVVTSKDIAE 26
L+K N+ L K +E K++ + + KI E K + T KD E
Sbjct: 183 LDKLNEDLKALNKANTDGSKNAEIEAKYKDIDAQNLKIKTAEEKNNKLQKELKTKKD--E 240
Query: 25 IISR 14
II +
Sbjct: 241 IIKK 244
Score = 32.5 bits (72), Expect = 4.2
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 385 LKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNIT 206
L +++ S+E ++ + + ++++ A+INDL L+ KN +EE KK
Sbjct: 35 LNKKIESLEKQLNEAKANSQKDQ-----AQINDLMKQLQETKNNSKTIEEKEKLVKKLQE 89
Query: 205 ELKNLKQ-KLEKYNKKLADAEK----VRDHYTALEIKHEIL 98
+L ++Q + KY +L A K + + Y LE K++ L
Sbjct: 90 DLNKIQQERTAKYQTELNAANKAIVEIPNKYKELEQKNDDL 130
>gi|1723492|sp|Q10411|YD86_SCHPO HYPOTHETICAL 222.8 KD PROTEIN C1F3.06C IN CHROMOSOME I
>gi|1256517|emb|CAA94624| (Z70690) unknown
[Schizosaccharomyces pombe]
Length = 1957
Score = 32.8 bits (73), Expect = 3.2
Identities = 33/161 (20%), Positives = 67/161 (41%)
Query: 580 LRGLRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENES 401
L+ LR + +D L + SK Y S ++ + +S + +LE E
Sbjct: 866 LKNLRSSLNV--AISDNDQILTQLAELSKNYDS--------LEQESAQLNSGLKSLEAEK 915
Query: 400 QPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEE 221
Q + E++ + L+ ++ E K+ L ++ + + NLK E + ++
Sbjct: 916 QLLHTENEEL-HIRLDKLTGKLKIEESKSSDLGKKLTARQEEISNLKEENMSQSQAITSV 974
Query: 220 KKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEIL 98
K + E + KLE AD E +++ + +E++ L
Sbjct: 975 KSKLDETLSKSSKLE------ADIEHLKNKVSEVEVERNAL 1009
>gi|1408192 (U59294) myosin heavy chain [Placopecten magellanicus]
Length = 1941
Score = 32.5 bits (72), Expect = 4.2
Identities = 31/119 (26%), Positives = 60/119 (50%)
Query: 421 VNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPL 242
+ E E Q VT+L EQ + L+++ IE D ++ D R+ L + + ++++ L
Sbjct: 869 IKKELEEQNVTLL-EQKNDLFLQLQTIE-DSMGDQED----RVEKLIMQKADFESQIKEL 922
Query: 241 EESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELE 65
EE +E+ ++L+ +K+K+E N L +H +L+ + H +IS L+
Sbjct: 923 EERLLDEEDAASDLEGIKKKMEGDNANLKKDIGELEH--SLQKSEQEKAHKDNQISTLQ 979
>gi|1770742|emb|CAA69036| (Y07759) mysoin heavy chain 12 [Homo sapiens]
Length = 1828
Score = 32.5 bits (72), Expect = 4.2
Identities = 34/126 (26%), Positives = 70/126 (54%), Gaps = 26/126 (20%)
Query: 424 IVNLENESQPVTMLKEQMWSVELEI--KAIEIDYEREK-----TDILAARINDLKIHLEN 266
+ NL+ E+ T+LK++ ++ I +A E+ EK T L +ND ++ +N
Sbjct: 1024 VSNLKEEN---TLLKQEKEALNHRIVQQAKEMTETMEKKLVEETKQLELDLNDERLRYQN 1080
Query: 265 LKNELIPLEESYNEEKKNITELKNLKQKLEK--------------YNKKLADAEKV---- 140
L NE LEE Y++ K+ +T + ++ + K ++ ++A+ E +
Sbjct: 1081 LLNEFSRLEERYDDLKEEMTLMVHVPKPGHKRTDSTHSSNESEYIFSSEIAEMEDIPSRT 1140
Query: 139 -RDHYTALEIKHEILPHIHKKISELESIKAVV 47
+ + + + K+++ELE K V+
Sbjct: 1141 EEPSEKKVPLDMSLFLKLQKRVTELEQEKQVM 1172
>gi|3219972|sp|P81328|YE1A_METJA HYPOTHETICAL PROTEIN MJ1417.1 >gi|2826408 (U67582) M. jannaschii
predicted coding region MJ1417.1 [Methanococcus
jannaschii]
Length = 145
Score = 32.5 bits (72), Expect = 4.2
Identities = 21/94 (22%), Positives = 48/94 (50%), Gaps = 2/94 (2%)
Query: 328 EREKTDILAARINDLKIHLENLKNELIPLEESYNEE--KKNITELKNLKQKLEKYNKKLA 155
+++ T+ + I L L+ +K++ I E ++N+ LK L QK++KY +
Sbjct: 11 QKDLTNKILDEIKKLYEQLDEIKDKNINSSNVQLNEFMRQNVNMLKELNQKIDKYLENNN 70
Query: 154 DAEKVRDHYTALEIKHEILPHIHKKISELESIKAVV 47
+ K + Y +I+H+ + +K+ ++ + +V
Sbjct: 71 EILKEMEKYVKEDIEHK--NRMERKLKQISMLLLIV 104
>gi|3044185 (AF056936) mature parasite-infected erythrocyte surface antigen
[Plasmodium falciparum]
Length = 1661
Score = 32.5 bits (72), Expect = 4.2
Identities = 29/114 (25%), Positives = 55/114 (47%), Gaps = 4/114 (3%)
Query: 445 DSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLEN 266
D+A ++ E E + V KE++ E E+K E E+E+ D +I E
Sbjct: 1040 DTANKDKVIEQEKEKEEVKE-KEEVKEKE-EVKEKEEVKEKEEVKEKDTESKDKEIEQEK 1097
Query: 265 LKNELIPLEESYNEEKKNITE----LKNLKQKLEKYNKKLADAEKVRDHYTALEIKHE 104
K E+ ++E E K + ++ +K++++K KK + + +D+ EI +E
Sbjct: 1098 EKEEVKEVKEKDTENKDKVIGQEIIIEEIKKEVKKRVKKRNNKNENKDNVIVQEIMNE 1155
>gi|1354363 (U52008) Enn50 [Streptococcus pyogenes]
Length = 375
Score = 32.5 bits (72), Expect = 4.2
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 1/94 (1%)
Query: 340 EIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKK 161
+I+ E EK L A +L + L++ + LE+ + K + + + E K
Sbjct: 83 KINAEEEKNKKLEATNKELNENYYKLQDGIDALEKEKEDSKTTLAKTTKENEISEASRKG 142
Query: 160 LA-DAEKVRDHYTALEIKHEILPHIHKKISELESI 59
L+ D E R LE KH+ L +KK++E I
Sbjct: 143 LSRDLEASRAAKKELEAKHQKLEAENKKLTEANQI 177
>gi|1572482 (U35816) nonmuscle myosin-II heavy chain [Drosophila melanogaster]
Length = 2012
Score = 32.5 bits (72), Expect = 4.2
Identities = 37/124 (29%), Positives = 62/124 (49%), Gaps = 14/124 (11%)
Query: 505 KSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYE 326
KS KK S L D I+L A + ++ LE + + + + ++ +I E
Sbjct: 1459 KSKKKIQSE--LEDATIEL--EAQRTKVLELEKKQKNFDKILAEEKAISEQIAQERDTAE 1514
Query: 325 RE----KTDILAA---------RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ 185
RE +T +L+ +I DL+ + L+NEL L + KN+ EL+ K+
Sbjct: 1515 REAREKETKVLSVSRELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKR 1574
Query: 184 KLEKYNKKL-ADAEKVRD 134
LE +L A E++ D
Sbjct: 1575 ALESQLAELKAQNEELED 1592
>gi|1770741|emb|CAA69035| (Y07759) mysoin heavy chain 12 [Homo sapiens]
Length = 1855
Score = 32.5 bits (72), Expect = 4.2
Identities = 34/126 (26%), Positives = 70/126 (54%), Gaps = 26/126 (20%)
Query: 424 IVNLENESQPVTMLKEQMWSVELEI--KAIEIDYEREK-----TDILAARINDLKIHLEN 266
+ NL+ E+ T+LK++ ++ I +A E+ EK T L +ND ++ +N
Sbjct: 1024 VSNLKEEN---TLLKQEKEALNHRIVQQAKEMTETMEKKLVEETKQLELDLNDERLRYQN 1080
Query: 265 LKNELIPLEESYNEEKKNITELKNLKQKLEK--------------YNKKLADAEKV---- 140
L NE LEE Y++ K+ +T + ++ + K ++ ++A+ E +
Sbjct: 1081 LLNEFSRLEERYDDLKEEMTLMVHVPKPGHKRTDSTHSSNESEYIFSSEIAEMEDIPSRT 1140
Query: 139 -RDHYTALEIKHEILPHIHKKISELESIKAVV 47
+ + + + K+++ELE K V+
Sbjct: 1141 EEPSEKKVPLDMSLFLKLQKRVTELEQEKQVM 1172
>gi|4099880 (U90942) myosin heavy chain 12 [Homo sapiens]
Length = 1855
Score = 32.5 bits (72), Expect = 4.2
Identities = 34/126 (26%), Positives = 70/126 (54%), Gaps = 26/126 (20%)
Query: 424 IVNLENESQPVTMLKEQMWSVELEI--KAIEIDYEREK-----TDILAARINDLKIHLEN 266
+ NL+ E+ T+LK++ ++ I +A E+ EK T L +ND ++ +N
Sbjct: 1024 VSNLKEEN---TLLKQEKEALNHRIVQQAKEMTETMEKKLVEETKQLELDLNDERLRYQN 1080
Query: 265 LKNELIPLEESYNEEKKNITELKNLKQKLEK--------------YNKKLADAEKV---- 140
L NE LEE Y++ K+ +T + ++ + K ++ ++A+ E +
Sbjct: 1081 LLNEFSRLEERYDDLKEEMTLMVHVPKPGHKRTDSTHSSNESEYIFSSEIAEMEDIPSRT 1140
Query: 139 -RDHYTALEIKHEILPHIHKKISELESIKAVV 47
+ + + + K+++ELE K V+
Sbjct: 1141 EEPSEKKVPLDMSLFLKLQKRVTELEQEKQVM 1172
>gi|4154618 (AE001450) putative [Helicobacter pylori J99]
Length = 412
Score = 32.5 bits (72), Expect = 4.2
Identities = 29/106 (27%), Positives = 51/106 (47%), Gaps = 4/106 (3%)
Query: 421 VNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPL 242
+ LE E Q K +EL I+ + ER+KT+ + N +I LE K + I
Sbjct: 162 IELEQERQ-----KTNKSGIELANSQIKAEQERQKTEQEKQKANKSEIELEQQKQKTINT 216
Query: 241 EESYNEEKKNITELKNLKQKL-EKYNKKLADAEKVRDHYT---ALEIKHE 104
+ +E+K+ +K +Q EK+ + +++ T A+EI+ E
Sbjct: 217 QRDLIKEQKDF--IKETEQNCQEKHGQLFIKKARIKTGITTGIAIEIEAE 264
>gi|454796 (U05574) antigen II/3 [Echinococcus granulosus]
Length = 559
Score = 32.5 bits (72), Expect = 4.2
Identities = 28/139 (20%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 442 SACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENL 263
S + I+ L + + M + + S+E++ I+ ERE + R+ + ++
Sbjct: 276 SKINKRILALCTGNHELYMRRRKSDSIEVQQMKIQAKEERELKEAERQRLKEERLQRMEN 335
Query: 262 KNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKV----RDHYTALEIKHEILP 95
+ +L L E++ ++ ++KN K Y K+A+ E + R +L+ + L
Sbjct: 336 EQKLRELRAQMVEKESDLADMKN---KASAYESKIAELEMLLQQERHARESLQKSQDKLA 392
Query: 94 HIHKKISELESIKAVVTSKDIAE 26
+++K+ E + A ++ +A+
Sbjct: 393 EMNRKLKEETAASAEERNRLMAQ 415
>gi|1078821|pir||S49143 EG10 protein - tapeworm (Echinococcus granulosus)
>gi|509760|emb|CAA82625| (Z29489) EG10 [Echinococcus
granulosus]
Length = 559
Score = 32.5 bits (72), Expect = 4.2
Identities = 28/139 (20%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 442 SACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENL 263
S + I+ L + + M + + S+E++ I+ ERE + R+ + ++
Sbjct: 276 SKINKRILALCTGNHELYMRRRKSDSIEVQQMKIQAKEERELKEAERQRLKEERLQRMEN 335
Query: 262 KNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKV----RDHYTALEIKHEILP 95
+ +L L E++ ++ ++KN K Y K+A+ E + R +L+ + L
Sbjct: 336 EQKLRELRAQMVEKESDLADMKN---KASAYESKIAELEMLLQQERHARESLQKSQDKLA 392
Query: 94 HIHKKISELESIKAVVTSKDIAE 26
+++K+ E + A ++ +A+
Sbjct: 393 EMNRKLKEETAASAEERNRLMAQ 415
>gi|3041708|sp|P13540|MYSB_MESAU MYOSIN HEAVY CHAIN, CARDIAC MUSCLE BETA ISOFORM
>gi|2119308|pir||I48153 beta-myosin heavy chain - golden
hamster >gi|402372 (L12104) beta-myosin heavy chain
[Mesocricetus auratus] >gi|1581130|prf||2116354A beta
myosin:SUBUNIT=heavy chain [Mesocricetus auratus]
Length = 1934
Score = 32.5 bits (72), Expect = 4.2
Identities = 31/121 (25%), Positives = 61/121 (49%), Gaps = 3/121 (2%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAA--RINDLKIHLENLKNELIPL 242
++N ++ + L E + + E KA++ +++ D+ A ++N L L+ ++ L
Sbjct: 974 VKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDDL 1033
Query: 241 EESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALE-IKHEILPHIHKKISELE 65
E S +EKK +L+ K+KLE D + ++ LE K ++ + KK EL
Sbjct: 1034 EGSLEQEKKVRMDLERAKRKLE------GDLKLTQESIMDLENDKQQLDEKLKKKDFELN 1087
Query: 64 SIKA 53
++ A
Sbjct: 1088 ALNA 1091
Score = 31.3 bits (69), Expect = 9.5
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 493 KYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKT 314
K+ + D+ +D+ S ++A ++ + + + + W + E E++ +++
Sbjct: 1417 KHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAE---WKQKYEESQSELESSQKEA 1473
Query: 313 DILAARINDLKI-------HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA 155
L+ + LK HLE K E L+E ++ + + +LEK K+L
Sbjct: 1474 RSLSTELFKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGSTGKSIHELEKIRKQL- 1532
Query: 154 DAEKVRDHYTALEIKHEILPH----IHKKISELESIKAVVTSK 38
+AEK+ + +ALE L H I + E IKA + K
Sbjct: 1533 EAEKM-ELQSALEEAEASLEHEEGNILRAQLEFNQIKAEIERK 1574
>gi|2924770 (AC002334) putative myosin heavy chain [Arabidopsis thaliana]
Length = 1611
Score = 32.5 bits (72), Expect = 4.2
Identities = 34/114 (29%), Positives = 60/114 (51%), Gaps = 13/114 (11%)
Query: 406 ESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYN 227
+S+ + L+ + ++LE + E+ E E T+ LAA LK + +L+ ++ + Y
Sbjct: 973 KSEEILKLQSALQDMQLEFE--ELAKELEMTNDLAAENEQLKDLVSSLQRKIDESDSKYE 1030
Query: 226 EEKKNITELKNLKQ-----------KLEKYNKKL-ADAEKVRDHYTALEIKH-EILPHIH 86
E K E +KQ KLE N+KL A + +L+ KH +++ +
Sbjct: 1031 ETSKLSEE--RVKQEVPVIDQGVIIKLEAENQKLKALVSTLEKKIDSLDRKHDDLVDLLE 1088
Query: 85 KKISELE 65
+KI E E
Sbjct: 1089 RKIDETE 1095
>gi|102489|pir||S15795 vacuolar proton pump homolog - Caenorhabditis elegans
>gi|3881668|emb|CAA77453| (Z11115) similar to
CLATHRIN-COATED VESICLE/SYNAPTIC VESICLE PROTON PUMP 116
KD SUBUNIT (EC 3.6.1.34); cDNA EST yk307a1.5 comes from
this gene; cDNA EST yk469d12.5 comes from this gene;
cDNA EST yk499g12.5 comes from this gene ...
Length = 935
Score = 32.5 bits (72), Expect = 4.2
Identities = 25/79 (31%), Positives = 39/79 (48%), Gaps = 3/79 (3%)
Query: 409 NESQPVTMLKEQMWSVELEIKAIEI---DYEREKTDILAARINDLKIHLENLKNELIPLE 239
NE + ++ ++ +E EIK +I D L + DL+ E L+NEL +
Sbjct: 65 NEVRRCDEMERKLRYLEREIKKDQIPMLDTGENPDAPLPREMIDLEATFEKLENELREVN 124
Query: 238 ESYNEEKKNITELKNLKQKLEK 173
++ KKN +EL LK L K
Sbjct: 125 KNEETLKKNFSELTELKHILRK 146
>gi|267105|sp|Q01056|TEGU_HSVSA PROBABLE LARGE TEGUMENT PROTEIN >gi|76687|pir||H36812 hypothetical
protein ORF64 - saimiriine herpesvirus 1 (strain 11)
>gi|60385|emb|CAA45687| (X64346) ORF 64; EERF2; sim. to
other HV [Saimiriine herpesvirus 2] >gi|330993 (M86409)
tegument protein [Herpesvirus saimiri]
Length = 2469
Score = 32.5 bits (72), Expect = 4.2
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEE 236
LENES+ + K + +E +KA E+ Y+ + DI++ ++ N L+PL
Sbjct: 1287 LENESRLLASQKNEFQMLENTVKAAELQYKATQEDIIS--------NMSEAINSLLPLAP 1338
Query: 235 SY 230
+Y
Sbjct: 1339 AY 1340
>gi|547969|sp|Q99323|MYSN_DROME MYOSIN HEAVY CHAIN, NON-MUSCLE (ZIPPER PROTEIN) (MYOSIN II)
>gi|103264|pir||A36014 myosin heavy chain, nonmuscle -
fruit fly (Drosophila melanogaster)
Length = 2017
Score = 32.5 bits (72), Expect = 4.2
Identities = 37/124 (29%), Positives = 62/124 (49%), Gaps = 14/124 (11%)
Query: 505 KSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYE 326
KS KK S L D I+L A + ++ LE + + + + ++ +I E
Sbjct: 1464 KSKKKIQSE--LEDATIEL--EAQRTKVLELEKKQKNFDKILAEEKAISEQIAQERDTAE 1519
Query: 325 RE----KTDILAA---------RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ 185
RE +T +L+ +I DL+ + L+NEL L + KN+ EL+ K+
Sbjct: 1520 REAREKETKVLSVSRELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKR 1579
Query: 184 KLEKYNKKL-ADAEKVRD 134
LE +L A E++ D
Sbjct: 1580 ALESQLAELKAQNEELED 1597
>gi|1352646|sp|P47326|OPPF_MYCGE OLIGOPEPTIDE TRANSPORT ATP-BINDING PROTEIN OPPF
>gi|1361735|pir||H64208 oligopeptide transport
ATP-binding protein amiF - Mycoplasma genitalium (SGC3)
>gi|1045757 (U39688) oligopeptide ABC transporter,
ATP-binding protein (oppF) [Mycoplasma genitalium]
Length = 848
Score = 32.5 bits (72), Expect = 4.2
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 4/96 (4%)
Query: 322 EKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK----LEKYNKKLA 155
+K++ A IN+LK++L+ LK +L +E +K++ ELK L ++ L+ +++
Sbjct: 509 KKSEANKASINELKVNLKTLKKQL--KQEKNTTKKQSKKELKPLLKEHHTALKLHDEFNH 566
Query: 154 DAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKD 35
D K + K+ L + KK ++ +KA+ +D
Sbjct: 567 DLRKWFKKLNFMVKKYNRLENSQKKFCLVKKLKALFKKQD 606
>gi|1572480 (U35816) nonmuscle myosin-II heavy chain [Drosophila melanogaster]
Length = 2017
Score = 32.5 bits (72), Expect = 4.2
Identities = 37/124 (29%), Positives = 62/124 (49%), Gaps = 14/124 (11%)
Query: 505 KSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYE 326
KS KK S L D I+L A + ++ LE + + + + ++ +I E
Sbjct: 1464 KSKKKIQSE--LEDATIEL--EAQRTKVLELEKKQKNFDKILAEEKAISEQIAQERDTAE 1519
Query: 325 RE----KTDILAA---------RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ 185
RE +T +L+ +I DL+ + L+NEL L + KN+ EL+ K+
Sbjct: 1520 REAREKETKVLSVSRELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKR 1579
Query: 184 KLEKYNKKL-ADAEKVRD 134
LE +L A E++ D
Sbjct: 1580 ALESQLAELKAQNEELED 1597
>gi|3041711|sp|Q05870|MYSP_SCHJA PARAMYOSIN (ANTIGEN SJ97) >gi|498376|dbj|BAA05972| (D28811)
paramyosin [Schistosoma japonicum]
Length = 866
Score = 32.5 bits (72), Expect = 4.2
Identities = 31/122 (25%), Positives = 66/122 (53%), Gaps = 16/122 (13%)
Query: 424 IVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLE-------N 266
+ L N +T ++ + + +A ++Y + K+ L ++++DLK L+ N
Sbjct: 186 LTELNNAKSRLTSENFELLHINQDYEAQILNYSKAKSS-LESQVDDLKRSLDDESRNRFN 244
Query: 265 LKNELIPLE-------ESYNEEKKNITELKNLKQKLEKYNKKLA--DAEKVRDHYTALEI 113
L+ +L L+ Y+EE + E NL+ ++ K+N +A ++ R+ + E
Sbjct: 245 LQAQLTSLQMDYDNLQAKYDEESE---EASNLRNQVSKFNADIAALKSKFERELMSKTEE 301
Query: 112 KHEILPHIHKKISELESI 59
E+ + +I+ELE +
Sbjct: 302 FEEMKRKLTMRITELEDV 319
>gi|555805 (U11825) paramyosin [Schistosoma japonicum]
Length = 866
Score = 32.5 bits (72), Expect = 4.2
Identities = 31/122 (25%), Positives = 66/122 (53%), Gaps = 16/122 (13%)
Query: 424 IVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLE-------N 266
+ L N +T ++ + + +A ++Y + K+ L ++++DLK L+ N
Sbjct: 186 LTELNNAKSRLTSENFELLHINQDYEAQILNYSKAKSS-LESQVDDLKRSLDDESRNRFN 244
Query: 265 LKNELIPLE-------ESYNEEKKNITELKNLKQKLEKYNKKLA--DAEKVRDHYTALEI 113
L+ +L L+ Y+EE + E NL+ ++ K+N +A ++ R+ + E
Sbjct: 245 LQAQLTSLQMDYDNLQAKYDEESE---EASNLRNQVSKFNADIAALKSKFERELMSKTEE 301
Query: 112 KHEILPHIHKKISELESI 59
E+ + +I+ELE +
Sbjct: 302 FEEMKRKLTMRITELEDV 319
>gi|1408194 (U59295) myosin heavy chain [Placopecten magellanicus]
Length = 1950
Score = 32.5 bits (72), Expect = 4.2
Identities = 31/119 (26%), Positives = 60/119 (50%)
Query: 421 VNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPL 242
+ E E Q VT+L EQ + L+++ IE D ++ D R+ L + + ++++ L
Sbjct: 868 IKKELEEQNVTLL-EQKNDLFLQLQTIE-DSMGDQED----RVEKLIMQKADFESQIKEL 921
Query: 241 EESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELE 65
EE +E+ ++L+ +K+K+E N L +H +L+ + H +IS L+
Sbjct: 922 EERLLDEEDAASDLEGIKKKMEGDNANLKKDIGELEH--SLQKSEQEKAHKDNQISTLQ 978
>gi|1617111|emb|CAA28300| (X04627) beta-myosin heavy chain [Homo sapiens]
Length = 258
Score = 32.5 bits (72), Expect = 4.2
Identities = 31/121 (25%), Positives = 61/121 (49%), Gaps = 3/121 (2%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAA--RINDLKIHLENLKNELIPL 242
++N ++ + L E + + E KA++ +++ D+ A ++N L L+ ++ L
Sbjct: 39 VKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDKVNTLTKAKVKLEQQVDDL 98
Query: 241 EESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALE-IKHEILPHIHKKISELE 65
E S +EKK +L+ K+KLE D + ++ LE K ++ + KK EL
Sbjct: 99 EGSLEQEKKVRMDLERAKRKLE------GDLKLTQESIMDLENDKQQLDERLKKKDFELN 152
Query: 64 SIKA 53
++ A
Sbjct: 153 ALNA 156
>gi|4426593|gb|AAD20441| (AF063023) AF-6 [Caenorhabditis elegans]
Length = 1666
Score = 32.5 bits (72), Expect = 4.2
Identities = 25/79 (31%), Positives = 46/79 (57%), Gaps = 10/79 (12%)
Query: 427 AIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARIND----------LKI 278
A++ E + T LKE M+ L++ EI R IL A IN+ K
Sbjct: 198 AVMRKRREKKLETKLKEMMFGGSLKVYGGEIVPTRPYVSIL-AEINENADRILGAALEKY 256
Query: 277 HLENLKNELIPLEESYNEEKKNITELKNL 191
LE+ K++ I +E S ++++K++++L+ +
Sbjct: 257 GLEHSKDDFILVEVSNDDDRKSMSDLREI 285
>gi|4522026|gb|AAD21789| (AC004886) C-terminus matches KIAA0559, N-terminus similar to Bassoon
protein; match to PID:g3043642; similar to PID:g3413810
[Homo sapiens]
Length = 3394
Score = 32.5 bits (72), Expect = 4.2
Identities = 24/98 (24%), Positives = 55/98 (55%), Gaps = 9/98 (9%)
Query: 421 VNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAAR----INDLKIHL-----E 269
++LE E + +K+Q ++ ELE + EI RE+ I+ + + +K HL E
Sbjct: 2099 LDLERELLELEKIKQQRFAEELEWERQEIQRFREQEKIMVQKKLEELQSMKQHLLFQQEE 2158
Query: 268 NLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHY 128
+ + + +E+ +++ + +++ L+Q+L + + +K+R Y
Sbjct: 2159 ERQAQFMMRQETLAQQQLQLEQIQQLQQQLHQQ----LEEQKIRQIY 2201
>gi|2131997|pir||S66717 hypothetical protein YOL034w - yeast (Saccharomyces cerevisiae)
>gi|1419827|emb|CAA99034| (Z74776) ORF YOL034w
[Saccharomyces cerevisiae]
Length = 1093
Score = 32.5 bits (72), Expect = 4.2
Identities = 24/97 (24%), Positives = 49/97 (49%), Gaps = 11/97 (11%)
Query: 292 NDLKIHLENLKNELIPLEESYNEEKKNIT-----------ELKNLKQKLEKYNKKLADAE 146
N+ KI +EN E+I L+ YN+ K + EL L K + N++
Sbjct: 653 NEQKIRIEN---EIINLKNEYNDRKSTLDALSNQKSGYRHELSELASKNDDINREAHQLN 709
Query: 145 KVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDIAEIISRLTRI 2
++R YT ++ + + +K+ +L+ S+ I +I ++ ++
Sbjct: 710 EIRKKYT---MRKSTIETLREKLDQLKREARKDVSQKIKDIDDQIQQL 754
>gi|1572481 (U35816) nonmuscle myosin-II heavy chain [Drosophila melanogaster]
Length = 2057
Score = 32.5 bits (72), Expect = 4.2
Identities = 37/124 (29%), Positives = 62/124 (49%), Gaps = 14/124 (11%)
Query: 505 KSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYE 326
KS KK S L D I+L A + ++ LE + + + + ++ +I E
Sbjct: 1504 KSKKKIQSE--LEDATIEL--EAQRTKVLELEKKQKNFDKILAEEKAISEQIAQERDTAE 1559
Query: 325 RE----KTDILAA---------RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ 185
RE +T +L+ +I DL+ + L+NEL L + KN+ EL+ K+
Sbjct: 1560 REAREKETKVLSVSRELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKR 1619
Query: 184 KLEKYNKKL-ADAEKVRD 134
LE +L A E++ D
Sbjct: 1620 ALESQLAELKAQNEELED 1637
>gi|2119295|pir||S61477 myosin II heavy chain, non-muscle - fruit fly (Drosophila
melanogaster)
Length = 2057
Score = 32.5 bits (72), Expect = 4.2
Identities = 37/124 (29%), Positives = 62/124 (49%), Gaps = 14/124 (11%)
Query: 505 KSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYE 326
KS KK S L D I+L A + ++ LE + + + + ++ +I E
Sbjct: 1504 KSKKKIQSE--LEDATIEL--EAQRTKVLELEKKQKNFDKILAEEKAISEQIAQERDTAE 1559
Query: 325 RE----KTDILAA---------RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ 185
RE +T +L+ +I DL+ + L+NEL L + KN+ EL+ K+
Sbjct: 1560 REAREKETKVLSVSRELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKR 1619
Query: 184 KLEKYNKKL-ADAEKVRD 134
LE +L A E++ D
Sbjct: 1620 ALESQLAELKAQNEELED 1637
>gi|4502409|oth|NP_001705|PBICD1 Bicaudal D (Drosophila) homolog 1 >gi|2745976 (U90028) bicaudal-D
[Homo sapiens]
Length = 975
Score = 32.5 bits (72), Expect = 4.2
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 379 EQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITEL 200
E+ E++I +EI K + + DLK ++ LK E YN+ +N T+
Sbjct: 401 EEAHDYEVDINGLEI--LECKYRVAVTEVIDLKAEIKALK-------EKYNKSVENYTDE 451
Query: 199 K-NLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESI 59
K + K++ Y++++ EK E + H+ K++ ++ SI
Sbjct: 452 KAKYESKIQMYDEQVTSLEKTTKE------SGEKMAHMEKELQKMTSI 493
>gi|157953 (M35012) non-muscle myosin heavy chain [Drosophila melanogaster]
Length = 1972
Score = 32.5 bits (72), Expect = 4.2
Identities = 37/124 (29%), Positives = 62/124 (49%), Gaps = 14/124 (11%)
Query: 505 KSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYE 326
KS KK S L D I+L A + ++ LE + + + + ++ +I E
Sbjct: 1419 KSKKKIQSE--LEDATIEL--EAQRTKVLELEKKQKNFDKILAEEKAISEQIAQERDTAE 1474
Query: 325 RE----KTDILAA---------RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ 185
RE +T +L+ +I DL+ + L+NEL L + KN+ EL+ K+
Sbjct: 1475 REAREKETKVLSVSRELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKR 1534
Query: 184 KLEKYNKKL-ADAEKVRD 134
LE +L A E++ D
Sbjct: 1535 ALESQLAELKAQNEELED 1552
>gi|476355|pir||A46762 myosin alpha heavy chain, cardiac muscle - human
>gi|219524|dbj|BAA00791| (D00943) cardiac alpha-myosin
heavy chain [Homo sapiens]
Length = 1939
Score = 32.5 bits (72), Expect = 4.2
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 493 KYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKT 314
K+ + D+ +D+ S ++A ++ + + + + W + E E++ +++
Sbjct: 1420 KHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAE---WKQKYEESQSELESSQKEA 1476
Query: 313 DILAARINDLKI-------HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA 155
L+ + LK HLE K E L+E ++ + + E +LEK K+L
Sbjct: 1477 RSLSTELFKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGEGGKNVHELEKVRKQL- 1535
Query: 154 DAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSK 38
+ EK+ + +ALE L H KI E IKA + K
Sbjct: 1536 EVEKL-ELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1577
Score = 32.5 bits (72), Expect = 4.2
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E KA++ +++
Sbjct: 953 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MAGLDEIIAKLTKEKKALQEAHQQAL 1009
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 1010 DDLQAEEDKVNTLSKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLE 1058
>gi|297024|emb|CAA79675| (Z20656) cardiac alpha-myosin heavy chain [Homo sapiens]
Length = 1939
Score = 32.5 bits (72), Expect = 4.2
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 493 KYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKT 314
K+ + D+ +D+ S ++A ++ + + + + W + E E++ +++
Sbjct: 1420 KHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAE---WKQKYEESQSELESSQKEA 1476
Query: 313 DILAARINDLKI-------HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA 155
L+ + LK HLE K E L+E ++ + + E +LEK K+L
Sbjct: 1477 RSLSTELFKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGEGGKNVHELEKVRKQL- 1535
Query: 154 DAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSK 38
+ EK+ + +ALE L H KI E IKA + K
Sbjct: 1536 EVEKL-ELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1577
Score = 31.3 bits (69), Expect = 9.5
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E KA++ +++
Sbjct: 953 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MAGLDEIIAKLTKEKKALQEAHQQAL 1009
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
D+ ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 1010 DDLQVEEDKVNSLSKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLE 1058
>gi|191618 (M76598) alpha cardiac myosin heavy chain [Mus musculus]
Length = 1938
Score = 32.5 bits (72), Expect = 4.2
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 493 KYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKT 314
K+ + D+ +D+ S ++A ++ + + + + W + E E++ +++
Sbjct: 1420 KHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAE---WKQKYEESQSELESSQKEA 1476
Query: 313 DILAARINDLKI-------HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA 155
L+ + LK HLE K E L+E ++ + + E +LEK K+L
Sbjct: 1477 RSLSTELFKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGEGGKNVHELEKIRKQL- 1535
Query: 154 DAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSK 38
+ EK+ + +ALE L H KI E IKA + K
Sbjct: 1536 EVEKL-ELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1577
Score = 32.1 bits (71), Expect = 5.6
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E KA++ +++
Sbjct: 953 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MAGLDEIIAKLTKEKKALQEAHQQAL 1009
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 1010 DDLQAEEDKVNTLTKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLE 1058
>gi|3024204|sp|Q02566|MYSA_MOUSE MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHA ISOFORM
>gi|2119306|pir||I49464 alpha cardiac myosin heavy chain
- mouse >gi|191620 (M76599) alpha cardiac myosin heavy
chain [Mus musculus] >gi|191624 (M76601) alpha cardiac
myosin heavy chain [Mus musculus]
Length = 1938
Score = 32.5 bits (72), Expect = 4.2
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 493 KYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKT 314
K+ + D+ +D+ S ++A ++ + + + + W + E E++ +++
Sbjct: 1420 KHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAE---WKQKYEESQSELESSQKEA 1476
Query: 313 DILAARINDLKI-------HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA 155
L+ + LK HLE K E L+E ++ + + E +LEK K+L
Sbjct: 1477 RSLSTELFKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGEGGKNVHELEKIRKQL- 1535
Query: 154 DAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSK 38
+ EK+ + +ALE L H KI E IKA + K
Sbjct: 1536 EVEKL-ELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1577
Score = 32.1 bits (71), Expect = 5.6
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E KA++ +++
Sbjct: 953 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MAGLDEIIAKLTKEKKALQEAHQQAL 1009
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 1010 DDLQAEEDKVNTLTKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLE 1058
>gi|191622 (M76600) alpha cardiac myosin heavy chain [Mus musculus]
Length = 1938
Score = 32.5 bits (72), Expect = 4.2
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 493 KYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKT 314
K+ + D+ +D+ S ++A ++ + + + + W + E E++ +++
Sbjct: 1420 KHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAE---WKQKYEESQSELESSQKEA 1476
Query: 313 DILAARINDLKI-------HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA 155
L+ + LK HLE K E L+E ++ + + E +LEK K+L
Sbjct: 1477 RSLSTELFKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGEGGKNVHELEKIRKQL- 1535
Query: 154 DAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSK 38
+ EK+ + +ALE L H KI E IKA + K
Sbjct: 1536 EVEKL-ELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1577
>gi|127741|sp|P02563|MYSA_RAT MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHA ISOFORM
>gi|92498|pir||S06005 myosin alpha heavy chain, cardiac
muscle - rat >gi|56655|emb|CAA34064| (X15938) alpha
cardiac myosin heavy chain (AA 1-1938) [Rattus
norvegicus]
Length = 1938
Score = 32.5 bits (72), Expect = 4.2
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 493 KYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKT 314
K+ + D+ +D+ S ++A ++ + + + + W + E E++ +++
Sbjct: 1419 KHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAE---WKQKYEESQSELESSQKEA 1475
Query: 313 DILAARINDLKI-------HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA 155
L+ + LK HLE K E L+E ++ + + E +LEK K+L
Sbjct: 1476 RSLSTELFKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGEGGKNVHELEKIRKQL- 1534
Query: 154 DAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSK 38
+ EK+ + +ALE L H KI E IKA + K
Sbjct: 1535 EVEKL-ELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1576
Score = 32.1 bits (71), Expect = 5.6
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E KA++ +++
Sbjct: 952 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MAGLDEIIAKLTKEKKALQEAHQQAL 1008
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 1009 DDLQAEEDKVNTLTKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLE 1057
>gi|3915779|sp|P13539|MYSA_MESAU MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHA ISOFORM
>gi|2119307|pir||I48175 alpha-cardiac myosin heavy chain
gene - golden hamster >gi|402374 (L15351) alpha-cardiac
myosin heavy chain gene [Mesocricetus auratus]
Length = 1939
Score = 32.5 bits (72), Expect = 4.2
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 493 KYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKT 314
K+ + D+ +D+ S ++A ++ + + + + W + E E++ +++
Sbjct: 1420 KHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAE---WKQKYEESQSELESSQKEA 1476
Query: 313 DILAARINDLKI-------HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA 155
L+ + LK HLE K E L+E ++ + + E +LEK K+L
Sbjct: 1477 RSLSTELFKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGEGGKNVHELEKVRKQL- 1535
Query: 154 DAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSK 38
+ EK+ + +ALE L H KI E IKA + K
Sbjct: 1536 EVEKM-ELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1577
Score = 32.1 bits (71), Expect = 5.6
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E KA++ +++
Sbjct: 953 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MAGLDEIIAKLTKEKKALQEAHQQAL 1009
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 1010 DDLQAEEDKVNTLTKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLE 1058
>gi|1141790 (U35816) nonmuscle myosin-II heavy chain [Drosophila melanogaster]
Length = 1972
Score = 32.5 bits (72), Expect = 4.2
Identities = 37/124 (29%), Positives = 62/124 (49%), Gaps = 14/124 (11%)
Query: 505 KSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYE 326
KS KK S L D I+L A + ++ LE + + + + ++ +I E
Sbjct: 1419 KSKKKIQSE--LEDATIEL--EAQRTKVLELEKKQKNFDKILAEEKAISEQIAQERDTAE 1474
Query: 325 RE----KTDILAA---------RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ 185
RE +T +L+ +I DL+ + L+NEL L + KN+ EL+ K+
Sbjct: 1475 REAREKETKVLSVSRELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKR 1534
Query: 184 KLEKYNKKL-ADAEKVRD 134
LE +L A E++ D
Sbjct: 1535 ALESQLAELKAQNEELED 1552
>gi|2196554|dbj|BAA20455| (AB004636) tropomyosin [Patinopecten yessoensis]
Length = 284
Score = 32.5 bits (72), Expect = 4.2
Identities = 22/105 (20%), Positives = 45/105 (41%)
Query: 454 DLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIH 275
D+ + A V LEN + +T L+ + +++ ++ +E D+ER + +L
Sbjct: 58 DVANEQLQEANVKLENSEKQITQLESDVGALQRRLQLLEEDFERSEEKLLTT-------- 109
Query: 274 LENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKV 140
E L+ +ES K ++++ K+L A+ V
Sbjct: 110 TEKLEEASKAADESERNRKVLEGRSNTSDERIDVLEKQLDSAKTV 154
>gi|2661598|emb|CAA15711| (AL009196) 1-evidence=predicted by content; 1-method=genefinder;084;
1-method_score=150.41; 1-evidence_end;
2-evidence=predicted by match;
2-match_accession=SWISS-PROT:Q92598;
2-match_description=HEAT-SHOCK PROTEIN 110 KD (KIAA...
Length = 923
Score = 32.5 bits (72), Expect = 4.2
Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 27/230 (11%)
Query: 715 SGKIKCIGATTFYEYRKYIEN----------DQALARRFVKINVPEPTISDGITILRGLR 566
SG +C G YE +K ++ L++ F K + S+
Sbjct: 532 SGIFRCTGVEYVYEKQKPEDDADEDSTLSKFGSTLSKLFTKEGEEKKDNSEQEEAANAGE 591
Query: 565 ERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTM 386
E ++ K ++ A K K S ++ + + + + V E+++Q V
Sbjct: 592 EPSKSEDNEKAKEED---ASKEQKSEESTKQDTEAKNETIKLVTVKSPVTYESQTQFVVP 648
Query: 385 LKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESY------NE 224
L + + K I+ E+ L + N L+ H+ ++ +L EESY E
Sbjct: 649 LVGSAYDQSVA-KLAAINKAEEQRVRLESAFNALEAHIIEVQQKLD--EESYAKCATAEE 705
Query: 223 EKKNITELKNLKQ---------KLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISE 71
++K + E L + K E Y +KLA +K+ + + A +HE P K +
Sbjct: 706 KEKLLAECSTLGEWLYEDLEDPKAEIYEEKLAQLKKLSNVFLARHWEHEERPEAIKALKG 765
Query: 70 L--ESIKAVVTSKDIAE 26
+ + K +VT +++ +
Sbjct: 766 MIDGAEKFLVTGRNLTK 782
>gi|3041706|sp|P13533|MYSA_HUMAN MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHA ISOFORM
Length = 1939
Score = 32.5 bits (72), Expect = 4.2
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 493 KYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKT 314
K+ + D+ +D+ S ++A ++ + + + + W + E E++ +++
Sbjct: 1420 KHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAE---WKQKYEESQSELESSQKEA 1476
Query: 313 DILAARINDLKI-------HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA 155
L+ + LK HLE K E L+E ++ + + E +LEK K+L
Sbjct: 1477 RSLSTELFKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGEGGKNVHELEKVRKQL- 1535
Query: 154 DAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSK 38
+ EK+ + +ALE L H KI E IKA + K
Sbjct: 1536 EVEKL-ELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 1577
Score = 31.3 bits (69), Expect = 9.5
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + L ++ A + + NL E + L E + + E KA++ +++
Sbjct: 953 KKDIDDLELTLAKVEKEKHATENKVKNLTEE---MAGLDEIIAKLTKEKKALQEAHQQAL 1009
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
D+ ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 1010 DDLQVEEDKVNSLSKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLE 1058
>gi|731152|sp|P30628|VPP1_CAEEL PUTATIVE CLATHRIN-COATED VESICLE/SYNAPTIC VESICLE PROTON PUMP
SUBUNIT >gi|3881663|emb|CAA77448| (Z11115) predicted
using Genefinder; TJ6/proton pump homologue, exon 4 is
alternatively spliced; cDNA EST EMBL:M89454 comes from
this gene; cDNA EST EMBL:D27314 comes from this gene;
cDNA EST EMBL:D37623 comes from this gene; c...
Length = 1030
Score = 32.5 bits (72), Expect = 4.2
Identities = 25/79 (31%), Positives = 39/79 (48%), Gaps = 3/79 (3%)
Query: 409 NESQPVTMLKEQMWSVELEIKAIEI---DYEREKTDILAARINDLKIHLENLKNELIPLE 239
NE + ++ ++ +E EIK +I D L + DL+ E L+NEL +
Sbjct: 65 NEVRRCDEMERKLRYLEREIKKDQIPMLDTGENPDAPLPREMIDLEATFEKLENELREVN 124
Query: 238 ESYNEEKKNITELKNLKQKLEK 173
++ KKN +EL LK L K
Sbjct: 125 KNEETLKKNFSELTELKHILRK 146
>gi|2498458|sp|P75471|HMW2_MYCPN CYTADHERENCE HIGH MOLECULAR WEIGHT PROTEIN 2 (CYTADHERENCE
ACCESSORY PROTEIN 2) >gi|2146221|pir||S73852
hypothetical protein F10_orf1818 - Mycoplasma pneumoniae
(SGC3) (ATCC 29342) >gi|1674221 (AE000051) Mycoplasma
pneumoniae, F10_orf1818 Protein [Mycoplasma pneumoniae]
>gi|1945046 (U59896) cytadherence accessory [Mycoplasma
pneumoniae]
Length = 1818
Score = 32.5 bits (72), Expect = 4.2
Identities = 26/84 (30%), Positives = 40/84 (46%), Gaps = 3/84 (3%)
Query: 409 NESQPV---TMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLE 239
N++Q V T L ++ ++E EIKA++ R+ ARI L+ L L NE E
Sbjct: 37 NDAQTVELQTQLLAEIKNLENEIKALKAQESRQPDPHNNARIQSLEASLNRLVNEYNNFE 96
Query: 238 ESYNEEKKNITELKNLKQKLEKYNKKL 158
N + EL N + + K+L
Sbjct: 97 FQKNYMVDRVAELNNKARFFKDELKRL 123
>gi|2911873 (AF047662) contains similarity to C3HC4-type zinc finger
[Caenorhabditis elegans]
Length = 955
Score = 32.1 bits (71), Expect = 5.6
Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 14/107 (13%)
Query: 418 NLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENL-------- 263
N+ + Q + +LKE + S++ E + D + + + L H + L
Sbjct: 657 NIAEKDQEMLLLKEHVESIQREFLKYKSDMNNVNNETIRLQTTQLLEHQQALAQKSLEVI 716
Query: 262 --KNELIPLEESYNEEKKNITE----LKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEI 101
K+E++ L+ ++ I + +K+LK+K ++ +K + + EI H+I
Sbjct: 717 EQKDEILHLKAQNQSQQTVIAQQEKSIKSLKEKSQQLEEKRSITNNTQRLLEETEIIHKI 776
Query: 100 L 98
L
Sbjct: 777 L 777
>gi|2632886|emb|CAB12392| (Z99107) similar to hypothetical proteins from B. subtilis
[Bacillus subtilis]
Length = 236
Score = 32.1 bits (71), Expect = 5.6
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 544 GVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWS 365
G SDD +K K+ ++ D+ + + + +++L + + E
Sbjct: 67 GQTFSDDKGKAVLKDIKQVNKTYKIGDVELTVKEMK----LIHLRPDYSMIDYFHELTHD 122
Query: 364 VELEIKAIEIDYEREKTD-ILAARINDLK------------IHLENLKNELIPLEESYNE 224
E + + +D + T + A I +K I+LE L EL E E
Sbjct: 123 EEFDFVKVFVDIKNTSTKKVNVAPIALMKTNTGETFDWNKDIYLEELNGEL----EGGAE 178
Query: 223 EKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIK-HEILPHIHKKISELESIK 56
+ N+ + N + K ADAEK +EI ++ H HKKIS+ + IK
Sbjct: 179 KSGNLGFIVNASSG--HAHDKAADAEKKTKEIKWIEITTSDVFDHNHKKISDAQKIK 233
>gi|4493978|emb|CAB39037| (AL034559) predicted using hexExon; MAL3P7.21 (PFC0960c),
Hypothetical protein, len: 1929 aa [Plasmodium
falciparum]
Length = 1928
Score = 32.1 bits (71), Expect = 5.6
Identities = 31/137 (22%), Positives = 72/137 (51%), Gaps = 17/137 (12%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREK--TDILAARINDLKIHLENLKNELIPL 242
L +++ + LKE+ V+ ++ + YE++K D + N++ + +KN+ L
Sbjct: 1477 LLTKNEEINNLKEEYKMVQQHLEDTNVLYEKQKLAIDTITKEKNNIINECDKIKNKNKKL 1536
Query: 241 EESYNEEKKNITE-LKNLK----QKLEKYNKKLADAEKVRDH-----YTALEIKHEILPH 92
E + N L N+K Q +E+ K + +H Y L+ ++E +
Sbjct: 1537 NNKLKENQNNYEHTLNNIKKENQQIIEREKKNFTQKVESLEHAFKQSYNQLKDQNE---N 1593
Query: 91 IHKKISELESIKAVVTS-----KDIAEIISRLTR 5
+ ++I +L+++ + + K++ EI+ + T+
Sbjct: 1594 LQQQIKQLKNVNQDIKTNSKNLKNVNEILIKETK 1627
>gi|158836 (M59323) antigen [Echinococcus multilocularis]
Length = 354
Score = 32.1 bits (71), Expect = 5.6
Identities = 26/124 (20%), Positives = 59/124 (46%), Gaps = 4/124 (3%)
Query: 442 SACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENL 263
S + I+ L + + M + + S+E++ I+ ERE + R+ + ++
Sbjct: 22 SKINKRILALCTGNHELYMRRRKSDSIEVQQMKIQAKEERELKEAERQRLKEERLQRMEN 81
Query: 262 KNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKV----RDHYTALEIKHEILP 95
+ +L L E++ ++ ++KN K Y K+A+ E + R +L+ + L
Sbjct: 82 EQKLRELRAQMVEKESDLADMKN---KASAYESKIAELEMLLQQERHARESLQKSQDKLA 138
Query: 94 HIHKKISE 71
+++K+ E
Sbjct: 139 EMNRKLKE 146
>gi|113451|sp|P09547|ADR6_YEAST TRANSCRIPTION REGULATORY PROTEIN ADR6 (SWI/SNF COMPLEX COMPONENT
ADR6) (REGULATORY PROTEIN SWI1) (REGULATORY PROTEIN
GAM3) >gi|73244|pir||TNBYR6 transcriptional regulatory
protein ADR6 - yeast (Saccharomyces cerevisiae)
>gi|3347|emb|CAA31013| (X12493) put. transcription
factor (AA 1 - 1314) [Saccharomyces cerevisiae]
>gi|965077 (U33335) Adr6p [Saccharomyces cerevisiae]
Length = 1314
Score = 32.1 bits (71), Expect = 5.6
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 738 FVQSNEPSFDAPAETIV*NSSTNNIDLSSDSICFTNDLNLSSNCPL 875
F+Q+ P F++P ++ NS+TN LS +I N + SSN PL
Sbjct: 135 FIQNQSPQFNSPYDSN--NSNTNLNSLSPQAILAKNSIIDSSNLPL 178
>gi|3821987 (AF061147) merozoite surface protein 1 [Plasmodium falciparum]
Length = 344
Score = 32.1 bits (71), Expect = 5.6
Identities = 32/119 (26%), Positives = 60/119 (49%), Gaps = 7/119 (5%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKL 179
L+I+A E+D +L + + L+N+K+ + +E+ + K I + L +
Sbjct: 195 LKIRANELD-------VLKKIVFGYRKPLDNIKDNVGKMEDYIKKNKTTIANINELIEGS 247
Query: 178 EK---YNKKLADAEKVRDHYTA---LEIKHEILPHIHKKISELES-IKAVVTSKDIAEII 20
EK NK + E + Y A L I ++ L H IS LE I A+ +++I +++
Sbjct: 248 EKTIDQNKNADNEEGKKKLYQAQYNLFIYNKQLQEAHNLISVLEKRIDALKKNENIKKLL 307
Query: 19 SRLTRI 2
++ I
Sbjct: 308 GKINEI 313
>gi|487104|pir||S39081 myosin heavy chain, adult - chicken (fragment)
Length = 858
Score = 32.1 bits (71), Expect = 5.6
Identities = 38/152 (25%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 511 AVKSSKKYISNRRLPDIAIDLVDS--ACSSAIVNLENESQPVTMLKEQMWSVELEIKAIE 338
+++ +K+ + N + D+ +D+ S AC++ +N + + K++ + E++A +
Sbjct: 335 SLEKTKQRLQNE-VEDLMVDVERSNAACAALDKKQKNFDKILAEWKQKYEETQTELEASQ 393
Query: 337 IDYEREKTDILAAR--INDLKIHLENLK-------NELIPLEESYNEEKKNITELKNLKQ 185
+ T++ + + HLE LK E+ L E E K + EL+ +K+
Sbjct: 394 KESRSLSTELFKMKNAYEESLDHLETLKRENKNLQQEIADLTEQIAEGGKAVHELEKVKK 453
Query: 184 KLEKYNKK----LADAEKVRDHYTAL---------EIKHEILPHIHKKISELESIK 56
+E+ + L +AE +H +IK EI I +K E++ +K
Sbjct: 454 HVEQEKSELQASLEEAEASLEHEEGKILRLQLELNQIKSEIDRKIAEKDEEIDQLK 509
>gi|401010|sp|P32001|RPSD_BUCAP RNA POLYMERASE SIGMA FACTOR RPOD (SIGMA-70) >gi|418628|pir||RNJV7A
transcription initiation factor sigma 70 - Buchnera
aphidicola >gi|144139 (M90644) sigma factor [Buchnera
aphidicola]
Length = 617
Score = 32.1 bits (71), Expect = 5.6
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 1/132 (0%)
Query: 460 AIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLK 281
A++ SS L + PV M +M +VEL + EID + + IN ++
Sbjct: 78 AVEAATQVLSSVESELGRTTDPVRMYMREMGTVELLTREGEIDIAKR----IEEGINQVQ 133
Query: 280 IHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYT-ALEIKHE 104
+ + L E Y+ K L ++ N AE++ H T A+ I E
Sbjct: 134 SSVSEYPEAITYLLEQYDRIKTGQIRLSDIITGFVDPN-----AEEIFSHSTSAIHIGSE 188
Query: 103 ILPHIHKKISELE 65
IL +I +E E
Sbjct: 189 ILDNITNDSNENE 201
>gi|348450|pir||A45620 cytovillin homolog - tapeworm (Echinococcus multilocularis)
>gi|158859 (M61186) tegument protein [Echinococcus
multilocularis] >gi|454794 (U05573) antigen II/3
[Echinococcus multilocularis] >gi|4127822|emb|CAA10109|
(AJ012663) ezrin-like protein [Echinococcus
multilocularis]
Length = 559
Score = 32.1 bits (71), Expect = 5.6
Identities = 26/124 (20%), Positives = 59/124 (46%), Gaps = 4/124 (3%)
Query: 442 SACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENL 263
S + I+ L + + M + + S+E++ I+ ERE + R+ + ++
Sbjct: 276 SKINKRILALCTGNHELYMRRRKSDSIEVQQMKIQAKEERELKEAERQRLKEERLQRMEN 335
Query: 262 KNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKV----RDHYTALEIKHEILP 95
+ +L L E++ ++ ++KN K Y K+A+ E + R +L+ + L
Sbjct: 336 EQKLRELRAQMVEKESDLADMKN---KASAYESKIAELEMLLQQERHARESLQKSQDKLA 392
Query: 94 HIHKKISE 71
+++K+ E
Sbjct: 393 EMNRKLKE 400
>gi|1495818|emb|CAA65728| (X97000) myosin-like protein [Taenia saginata]
Length = 559
Score = 32.1 bits (71), Expect = 5.6
Identities = 28/172 (16%), Positives = 73/172 (42%)
Query: 538 KISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVE 359
KI+ L + + Y+ R+ I + + E E Q + + Q E
Sbjct: 277 KINKRILALCTGNHELYMRRRKSDSIEVQQMKIQAKEERELKEAEKQRLKEERLQRMENE 336
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKL 179
+++ + ++++D+ D+K+ + ++ LE N+E+ L+ + KL
Sbjct: 337 QKLQELRAQMLQKESDLA-----DMKLRASAYEGKIAELESLLNQERHARESLQKSQDKL 391
Query: 178 EKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDIAEI 23
+ N+KL + + ++E ++ ++ + E+E+ K + + + ++
Sbjct: 392 AEMNRKLREETE-----ASVEERNRLVAERDRVQREVETQKVAMAAMEAEKV 438
>gi|2649013 (AE000995) A. fulgidus predicted coding region AF1557
[Archaeoglobus fulgidus]
Length = 167
Score = 32.1 bits (71), Expect = 5.6
Identities = 25/81 (30%), Positives = 46/81 (55%), Gaps = 9/81 (11%)
Query: 244 LEESYNEEKKNITELKNL-KQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHK----- 83
LE E+++ + EL+ + +++LEK +++A +E K E+L +HK
Sbjct: 11 LERKLAEKERELVELRRMNREELEKIKREIA-----------MEAKEEVLREVHKLLQNS 59
Query: 82 ---KISELESIKAVVTSKDIAEIISRLTRI 2
++SE++S K V K + II+ L I
Sbjct: 60 QIQRLSEVDS-KIVELRKAMESIITELAYI 88
>gi|3098266 (AF026198) mitosis-specific chromosome segregation protein SMC1
homolog [Fugu rubripes]
Length = 1233
Score = 32.1 bits (71), Expect = 5.6
Identities = 23/93 (24%), Positives = 46/93 (48%)
Query: 382 KEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITE 203
K MW ++ EI+ +++ I++ L++LKN+ + + N++ E
Sbjct: 834 KVMMWEQTVKKDDAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNH---E 890
Query: 202 LKNLKQKLEKYNKKLADAEKVRDHYTALEIKHE 104
++ +++KL NK+L +K TA+E K E
Sbjct: 891 MEEIRKKLGGANKELTQLQK---EVTAIETKLE 920
>gi|4220474 (AC006069) putative myosin heavy chain [Arabidopsis thaliana]
Length = 629
Score = 32.1 bits (71), Expect = 5.6
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 25/198 (12%)
Query: 598 SDGITILRGLRERFEAH-------HG---VKISDDALVFAVKSSKKYISNRRLPDIAIDL 449
S G+T R ++ F+A HG VK+ + L V+ + +S + A+ L
Sbjct: 46 SKGLTRRRSMKPSFDADNEFITLLHGSDPVKVELNRLENDVRDKDRELSESQAEIKALRL 105
Query: 448 VDSACSSAIVNLENE----SQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLK 281
+ A+ L E S+ + + + + S LEIK I + AA +
Sbjct: 106 SERQREKAVEELTEELGKMSEKLKLTENLLDSKNLEIKKINEEKRASMAAQFAAEATLRR 165
Query: 280 IHLENLKNE-------LIPLEESYNEEKKNITELKNLKQKLEKYNKK----LADAEKVRD 134
+H ++ L PLE + I +L++ + L++ K L DAE+
Sbjct: 166 VHAAQKDDDMPPIEAILAPLEAELKLARHEIVKLQDDNRALDRLTKSKEAALLDAERTVQ 225
Query: 133 HYTALEIKHEILPHIHKKISELESIKAVVTSKDIAEIISRLTR 5
A K ++ + K EL +K + ++ I+ +L R
Sbjct: 226 SALA---KASMVDDLQNKNQEL--MKQIEICQEENRILDKLHR 263
>gi|422888|pir||S32763 hypothetical protein, 160K - human >gi|296164|emb|CAA80271| (Z22551)
156 kDa Protein [Homo sapiens]
Length = 1356
Score = 32.1 bits (71), Expect = 5.6
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 11/177 (6%)
Query: 661 IENDQALARRFVKINVPEPTISDGITILRGLRERFEAHHGVKISDDALVFAVKSSKKYIS 482
+E + L + F K++VP +S G + ++ E G S++ V K K+
Sbjct: 1069 LEAKEVLKKLFPKVSVPS-NLSYGEWLHGFEKKAKECMAGTSGSEEVKVLEHKL-KEADE 1126
Query: 481 NRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELE-----IKAIEIDYEREK 317
L + + S + L+ + V +E W V+++ IK ++ + +
Sbjct: 1127 MHTLLQLECEKYKSVLAETEGILQKLQRSVEQ-EENKWKVKVDESHKTIKQMQSSFTSSE 1185
Query: 316 TDILAARINDLKIHLENLKNEL----IPLEESYNEEKKNITELKNLKQKLEKYNKKLAD- 152
++ R+ +ENL+ E + LE++ E +TE++ LK L + KKL D
Sbjct: 1186 QEL--ERLRSENKDIENLRREREHLEMELEKAEMERSTYVTEVRELKDLLTELQKKLDDS 1243
Query: 151 -AEKVRDH 131
+E VR +
Sbjct: 1244 YSEAVRQN 1251
>gi|1000405|bbs|168508 (S78540) myosin heavy chain, AMHC1 [chickens, embryos, heart atria,
Peptide Partial, 764 aa] [Gallus gallus]
Length = 764
Score = 32.1 bits (71), Expect = 5.6
Identities = 45/165 (27%), Positives = 81/165 (48%), Gaps = 8/165 (4%)
Query: 571 LRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLE--NESQ 398
L+E EA V +A +++ +K + N + D+ D+ S ++A ++ + N +
Sbjct: 226 LQEAEEAVEAV----NAKCSSLEKTKHRLQNE-VEDLMADVERSNAAAAALDKKQRNFDK 280
Query: 397 PVTMLKEQMWSVELEIKAIEIDYEREKTDI--LAARINDLKIHLENLKNELIPLEESYNE 224
++ K++ + E++A + + T++ L +L HLE K E ++ E
Sbjct: 281 ILSEWKQKFEESQTELEASQKEARSLSTELFKLKKSYEELMEHLETFKRE----NKNLQE 336
Query: 223 EKKNITELKNLKQK----LEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKI 77
E +TE ++QK LEK K+L D EK+ + ALE L H KI
Sbjct: 337 EISGLTEQLGVQQKSIHELEKVRKQL-DREKL-ELEAALEEAEASLEHEEGKI 387
>gi|1197337|emb|CAA64859| (X95601) Lmp4 protein [Mycoplasma hominis]
Length = 624
Score = 32.1 bits (71), Expect = 5.6
Identities = 47/197 (23%), Positives = 80/197 (39%), Gaps = 3/197 (1%)
Query: 748 DCTNMLKPSLASGKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGL 569
D L+ L + KI G T FY +K +E D K+ E TIL
Sbjct: 399 DANKSLQDELNNAKITKKGITDFYNSKKQLE-DLIKTDDAKKVGTTEAD-----TIL--- 449
Query: 568 RERFEAHHGVKISDDALVFAVKSSKKYISN-RRLPDIAIDLVDSACSSAIVNLENESQPV 392
H ISD + +K + + I++ +++ + I S ++NE Q
Sbjct: 450 ------DHYKNISDASKNEEIKQATQKINDIKKIIETKIQEKKRNEFSQFEQIKNELQSF 503
Query: 391 TM--LKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEK 218
LK+Q ++ +I E + + + N +EN K +L P + + +
Sbjct: 504 INKDLKDQKYN------SIRTKIENKINGVSSINKNSKIQDIENAKKQLEPAKNEFEKII 557
Query: 217 KNITELKNLKQKLEKYNKKL 158
NI + + KQK+E+ K L
Sbjct: 558 NNIKKFNSQKQKVEEKLKFL 577
>gi|1698895 (U75316) beta-myosin heavy chain [Sus scrofa]
Length = 1935
Score = 32.1 bits (71), Expect = 5.6
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 493 KYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKT 314
K+ + D+ +D+ S ++A ++ + + + + W + E E++ +++
Sbjct: 1418 KHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAE---WKQKYEESQSELESSQKEA 1474
Query: 313 DILAARINDLKI-------HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA 155
L+ + LK HLE K E L+E ++ + + +LEK K+L
Sbjct: 1475 RSLSTELFKLKNAYEESLEHLETSKRENKNLQEEISDLTEQLGSSGKTIHELEKVRKQL- 1533
Query: 154 DAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSK 38
+AEK+ + +ALE L H KI E IKA + K
Sbjct: 1534 EAEKL-ELQSALEESEASLEHEEGKILRAQLEFNQIKAEMERK 1575
>gi|1945089|dbj|BAA19697| (D88802) membrane protein [Bacillus subtilis]
Length = 254
Score = 32.1 bits (71), Expect = 5.6
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 544 GVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWS 365
G SDD +K K+ ++ D+ + + + +++L + + E
Sbjct: 85 GQTFSDDKGKAVLKDIKQVNKTYKIGDVELTVKEMK----LIHLRPDYSMIDYFHELTHD 140
Query: 364 VELEIKAIEIDYEREKTD-ILAARINDLK------------IHLENLKNELIPLEESYNE 224
E + + +D + T + A I +K I+LE L EL E E
Sbjct: 141 EEFDFVKVFVDIKNTSTKKVNVAPIALMKTNTGETFDWNKDIYLEELNGEL----EGGAE 196
Query: 223 EKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIK-HEILPHIHKKISELESIK 56
+ N+ + N + K ADAEK +EI ++ H HKKIS+ + IK
Sbjct: 197 KSGNLGFIVNASSG--HAHDKAADAEKKTKEIKWIEITTSDVFDHNHKKISDAQKIK 251
>gi|2127599|pir||PC6003 surface membrane protein lmp4 - Mycoplasma hominis (SGC3)
(fragment)
Length = 624
Score = 32.1 bits (71), Expect = 5.6
Identities = 47/197 (23%), Positives = 80/197 (39%), Gaps = 3/197 (1%)
Query: 748 DCTNMLKPSLASGKIKCIGATTFYEYRKYIENDQALARRFVKINVPEPTISDGITILRGL 569
D L+ L + KI G T FY +K +E D K+ E TIL
Sbjct: 399 DANKSLQDELNNAKITKKGITDFYNSKKQLE-DLIKTDDAKKVGTTEAD-----TIL--- 449
Query: 568 RERFEAHHGVKISDDALVFAVKSSKKYISN-RRLPDIAIDLVDSACSSAIVNLENESQPV 392
H ISD + +K + + I++ +++ + I S ++NE Q
Sbjct: 450 ------DHYKNISDASKNEEIKQATQKINDIKKIIETKIQEKKRNEFSQFEQIKNELQSF 503
Query: 391 TM--LKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEK 218
LK+Q ++ +I E + + + N +EN K +L P + + +
Sbjct: 504 INKDLKDQKYN------SIRTKIENKINGVSSINKNSKIQDIENAKKQLEPAKNEFEKII 557
Query: 217 KNITELKNLKQKLEKYNKKL 158
NI + + KQK+E+ K L
Sbjct: 558 NNIKKFNSQKQKVEEKLKFL 577
>gi|2147744|pir||I51302 myosin heavy chain - chicken (fragment)
Length = 764
Score = 32.1 bits (71), Expect = 5.6
Identities = 45/165 (27%), Positives = 81/165 (48%), Gaps = 8/165 (4%)
Query: 571 LRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLE--NESQ 398
L+E EA V +A +++ +K + N + D+ D+ S ++A ++ + N +
Sbjct: 226 LQEAEEAVEAV----NAKCSSLEKTKHRLQNE-VEDLMADVERSNAAAAALDKKQRNFDK 280
Query: 397 PVTMLKEQMWSVELEIKAIEIDYEREKTDI--LAARINDLKIHLENLKNELIPLEESYNE 224
++ K++ + E++A + + T++ L +L HLE K E ++ E
Sbjct: 281 ILSEWKQKFEESQTELEASQKEARSLSTELFKLKKSYEELMEHLETFKRE----NKNLQE 336
Query: 223 EKKNITELKNLKQK----LEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKI 77
E +TE ++QK LEK K+L D EK+ + ALE L H KI
Sbjct: 337 EISGLTEQLGVQQKSIHELEKVRKQL-DREKL-ELEAALEEAEASLEHEEGKI 387
>gi|466061|sp|P34606|YO66_CAEEL HYPOTHETICAL 32.5 KD PROTEIN ZK1098.6 IN CHROMOSOME III
>gi|482166|pir||S40929 hypothetical protein ZK1098.6 -
Caenorhabditis elegans >gi|3881485|emb|CAA80134|
(Z22176) similar to Coiled coil protein [Caenorhabditis
elegans]
Length = 278
Score = 32.1 bits (71), Expect = 5.6
Identities = 34/139 (24%), Positives = 73/139 (52%), Gaps = 22/139 (15%)
Query: 418 NLENESQPVTMLKEQMWSVEL---EIKAIEIDYEREKT--------------DILAARIN 290
N E++S +++ + WS + A ++D +++T + L A +
Sbjct: 4 NSEDQSAQLSLHLDNEWSFNFGSETLNASQLDKSQDQTIFENNSILVDKNVYEQLVATCD 63
Query: 289 DLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIK 110
+K L L E++ E++++++ +N E+K + ++ ++ KK+ K H+T K
Sbjct: 64 AMKAQLHQLM-EMVD-EKTFDDQNQNSEEMKLILKERDELKKKVDQKSKETVHWTKKYYK 121
Query: 109 -----HEILPHIHKKISELESIKAVVTSKDIAEIISRLTRI 2
EIL +I L+S + V K + EI+ + +
Sbjct: 122 LKAYGQEILKKRENEIKLLKS-EVVDGKKKLNEIVETINHL 161
>gi|114205|sp|P13050|ARP4_STRPY IGA RECEPTOR PRECURSOR >gi|80035|pir||S05568 IgA receptor precursor
- Streptococcus pyogenes >gi|736315|emb|CAA33269|
(X15198) Arp4 protein [Streptococcus pyogenes]
Length = 386
Score = 32.1 bits (71), Expect = 5.6
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 403 SQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNE 224
S+ + +E VE ++ A+ ++++ K D +I+D + L +L E+ +
Sbjct: 210 SRDLEASREAKKKVEADLAALTAEHQKLKED---KQISDAS--RQGLSRDLEASREAKKK 264
Query: 223 EKKNITELKNLKQKLEKYNKKLADAEKVRDHYTA-----LEIKHEIL-PHIHKKISELES 62
+ ++ E + Q LEK NK+L + +K+ + A LE + + L + K+ EL
Sbjct: 265 VEADLAEANSKLQALEKLNKELEEGKKLSEKEKAELQARLEAEAKALKEQLAKQAEELAK 324
Query: 61 IK 56
+K
Sbjct: 325 LK 326
>gi|86369|pir||S03166 myosin heavy chain, gizzard smooth muscle - chicken
>gi|63634|emb|CAA29793| (X06546) MHC (AA 1-1979) [Gallus
gallus]
Length = 1979
Score = 32.1 bits (71), Expect = 5.6
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 478 RRLPDIAIDLVDSACS----SAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTD 311
R + + I L DS +A V E + + + + + E KA D + +
Sbjct: 1370 RHISTLTIQLSDSKKKLQEFTATVETMEEGKKKLQREIESLTQQFEEKAASYDKLEKTKN 1429
Query: 310 ILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKL------------EKYN 167
L ++DL + L+N + + LE+ + + + E KN+ K EK
Sbjct: 1430 RLQQELDDLVVDLDNQRQLVSNLEKKQKKFDQMLAEEKNISSKYADERDRAEAEAREKET 1489
Query: 166 KKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKD 35
K L+ A + + ALE K E+ +E+E + V+SKD
Sbjct: 1490 KALSLARALEE---ALEAKEELERTNKMLKAEMEDL---VSSKD 1527
Score = 31.3 bits (69), Expect = 9.5
Identities = 28/109 (25%), Positives = 54/109 (48%), Gaps = 3/109 (2%)
Query: 391 TMLKEQMWSVELEIKAIE--IDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEK 218
T L+++ +E I +E +D E + ++ R+ E L NEL E+
Sbjct: 1731 TSLQDEKRRLEARIAQLEEELDEEHSNIETMSDRMRKAVQQAEQLNNELA-------TER 1783
Query: 217 KNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHE-ILPHIHKKISELE 65
+ +N +Q+LE+ NK+L K+++ A++ K + + + KI+ LE
Sbjct: 1784 ATAQKNENARQQLERQNKEL--RSKLQEMEGAVKSKFKSTIAALEAKIASLE 1833
>gi|2119311|pir||I52966 myosin heavy chain 12 - human (fragment) >gi|797366|bbs|159307
(S74799) myosin heavy chain 12, MYH12 [human, brain,
Peptide Partial, 411 aa] [Homo sapiens]
Length = 411
Score = 32.1 bits (71), Expect = 5.6
Identities = 24/92 (26%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
Query: 322 EKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEK---------- 173
E+T L +ND ++ +NL NE LEE Y++ K+ +T + ++ + K
Sbjct: 2 EETKQLELDLNDERLRYQNLLNEFSRLEERYDDLKEEMTLMVHVPKPGHKRTDSTHSSNE 61
Query: 172 ----YNKKLADAEKV-----RDHYTALEIKHEILPHIHKKISELESIKAVV 47
++ ++A+ E + + + + + K+++ELE K V+
Sbjct: 62 SEYIFSSEIAEMEDIPSRTEEPSEKKVPLDMSLFLKLQKRVTELEQEKQVM 112
>gi|2435621 (AF026215) No definition line found [Caenorhabditis elegans]
Length = 843
Score = 32.1 bits (71), Expect = 5.6
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 190 KQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVV-TSKDIAEIISR 14
K +LE N+KL + Y +KH L H H+++ + S K V+ +S+D+ SR
Sbjct: 280 KSQLEWMNEKLFKYDSSSARYNPFTLKHVTLCHSHQELMRVRSPKVVLCSSQDMESGFSR 339
>gi|3915778|sp|P10587|MYSG_CHICK MYOSIN HEAVY CHAIN, GIZZARD SMOOTH MUSCLE
Length = 1979
Score = 32.1 bits (71), Expect = 5.6
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 16/148 (10%)
Query: 478 RRLPDIAIDLVDSACS----SAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTD 311
R + + I L DS +A V E + + + + + E KA D + +
Sbjct: 1370 RHISTLTIQLSDSKKKLQEFTATVETMEEGKKKLQREIESLTQQFEEKAASYDKLEKTKN 1429
Query: 310 ILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKL------------EKYN 167
L ++DL + L+N + + LE+ + + + E KN+ K EK
Sbjct: 1430 RLQQELDDLVVDLDNQRQLVSNLEKKQKKFDQMLAEEKNISSKYADERDRAEAEAREKET 1489
Query: 166 KKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKD 35
K L+ A + + ALE K E+ +E+E + V+SKD
Sbjct: 1490 KALSLARALEE---ALEAKEELERTNKMLKAEMEDL---VSSKD 1527
Score = 31.3 bits (69), Expect = 9.5
Identities = 28/109 (25%), Positives = 54/109 (48%), Gaps = 3/109 (2%)
Query: 391 TMLKEQMWSVELEIKAIE--IDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEK 218
T L+++ +E I +E +D E + ++ R+ E L NEL E+
Sbjct: 1731 TSLQDEKRRLEARIAQLEEELDEEHSNIETMSDRMRKAVQQAEQLNNELA-------TER 1783
Query: 217 KNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHE-ILPHIHKKISELE 65
+ +N +Q+LE+ NK+L K+++ A++ K + + + KI+ LE
Sbjct: 1784 ATAQKNENARQQLERQNKEL--RSKLQEMEGAVKSKFKSTIAALEAKIASLE 1833
>gi|4506751|oth|NP_002947|PRSN restin (Reed-Steinberg cell-expressed intermediate
filament-associated protein)
>gi|266902|sp|P30622|REST_HUMAN RESTIN (CYTOPLASMIC
LINKER PROTEIN-170 ALPHA-2) (CLIP-170) (REED-STERNBERG
INTERMEDIATE FILAMENT ASSOCIATED PROTEIN)
>gi|88551|pir||S22695 restin - human
>gi|35999|emb|CAA46050| (X64838) restin [Homo sapiens]
Length = 1427
Score = 32.1 bits (71), Expect = 5.6
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 325 REKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAE 146
+EKT+ LA+ + D K L+NEL L+E+ KN+ EL K+ L N+K+ +
Sbjct: 1089 KEKTETLAS-LEDTKQTNAKLQNELDTLKEN---NLKNVEELNKSKELLTVENQKMEEFR 1144
Query: 145 K 143
K
Sbjct: 1145 K 1145
>gi|4185884|emb|CAA70581| (Y09430) Groovin [Drosophila melanogaster]
Length = 4151
Score = 32.1 bits (71), Expect = 5.6
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 310 ILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDH 131
++ R+ND + L+NL EL +K LK L Q LE+ ++L E V +
Sbjct: 1021 LIGVRLNDRQHELDNLNEEL----------RKQYENLKGLAQFLERVQRQL-PKESVSNK 1069
Query: 130 YTA---LEIKHEILPHIHKKISELESIKAVVTSKDI 32
A ++ +IL +++K S L++ KA V KDI
Sbjct: 1070 DEAERCIKQARKILEDMYEKQSLLDTTKAQV--KDI 1103
>gi|915377 (U28154) orf12 [Haemophilus somnus]
Length = 342
Score = 32.1 bits (71), Expect = 5.6
Identities = 31/125 (24%), Positives = 63/125 (49%), Gaps = 14/125 (11%)
Query: 415 LENESQPVTMLKEQMWSVE------LEIKAIEIDY--EREKTDILAARINDLKIHLENLK 260
++ S + +KEQ+ ++ E+KA + D REK ILA + +K E +K
Sbjct: 36 IQGSSVEIKKMKEQLKKIDGFNKLNSELKASQNDLVKAREKVSILAEEMKKIKTPTEEMK 95
Query: 259 NELIPLEESYN------EEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEIL 98
+ +ES E+K+ + L+ K N E++R + A++ ++ +
Sbjct: 96 RKFSKAKESAARLRDTLEKKRKVLHLERNALKSAGINTSKLKTEEIRLN-DAIKKTNQSI 154
Query: 97 PHIHKKISELESIKAVVTS 41
K+ L++I+ V++
Sbjct: 155 ETQKNKLKSLQNIQNKVSN 173
>gi|2496852|sp|Q11102|YL17_CAEEL HYPOTHETICAL 131.5 KD PROTEIN C02F12.7 IN CHROMOSOME X >gi|1109896
(U41545) coded for by C. elegans cDNA yk4b2.5; coded for
by C. elegans cDNA CEESN67F; coded for by C. elegans cDNA
yk94h12.5; coded for by C. elegans cDNA CEESD93F; coded
for by C. elegans cDNA CEESG57F; coded for by C. elegans
cDNA yk4b2.3;...
Length = 1130
Score = 32.1 bits (71), Expect = 5.6
Identities = 33/117 (28%), Positives = 63/117 (53%), Gaps = 34/117 (29%)
Query: 418 NLENESQPVTMLKEQMWSVELE--------IKAIEIDYEREKTDI--LAARINDLKIHLE 269
N+E+ Q + L E++ + E E I +EID + I L R+ND+ +
Sbjct: 706 NIEHLKQEIAQLNEKISTKETEKDSELEKTIAQLEIDNSSKSDQIEKLHLRVNDMLDQMG 765
Query: 268 NLKNELIP---------------LEESYNEEKKNITELKNLKQK---------LEKYNKK 161
+K+EL+ LE + E + + + ++K EK N+
Sbjct: 766 TIKDELVKKNEEIKTISAKTAQLLESNTVESETKLASVTEEREKEIQSFQTQISEKDNEV 825
Query: 160 LADAEKVRDHYTALEIKHEILPHIHKKISEL 68
L AE++ + T L+ + L + K+ ++
Sbjct: 826 LTKAERINELETCLKEREVELTGMRTKLDDM 856
Score = 31.7 bits (70), Expect = 7.3
Identities = 30/105 (28%), Positives = 53/105 (49%), Gaps = 5/105 (4%)
Query: 325 REKTDILAARINDLKIHLENLKNELIPL-EESY---NEEKKNITELKNLKQKLEKYNKKL 158
+EK D A IN++ L++ +NE+ L EE Y + +K E L Q+L + K+
Sbjct: 874 QEKIDEKEATINEMNERLKSRENEIAKLHEEMYMQKTQNEKRNEEQSKLFQEL-MFEKEQ 932
Query: 157 ADAEKVRDHYTALEIKHEILPHIHKKISE-LESIKAVVTSKDIAEIISRL 11
+AEK + E++ K E +E ++ + K+ E+I +L
Sbjct: 933 LEAEKAEQSHIEAEVEQVFQADKESKWKEQIEDLENALQRKN--ELIQQL 980
>gi|1621107 (U62026) cardiac muscle factor 1 CMF1 [Gallus gallus]
Length = 1538
Score = 32.1 bits (71), Expect = 5.6
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 28/132 (21%)
Query: 433 SSAIVNLENESQPVTMLKEQMWS--VELEIKAIEIDYEREKTDIL---AARINDLKIHLE 269
SS + +E+E + K+++ + VEL +KA + DIL NDL+ LE
Sbjct: 1082 SSQLTRMEHEHECWHQEKQKLQNLIVELNLKAQPFSDDGTFPDILNILKVAYNDLEKELE 1141
Query: 268 NLKNELIPLEESYNEEKKNITELK-----------NLKQKLEKYNKKLAD-AEKVRDH-- 131
+ E L + NE+ +N +L+ L+++ KKLA+ + +++H
Sbjct: 1142 STLCEKTALCKKVNEQTENCIKLEVKLSDAEQAISKLQEEFTMERKKLAEQIQLLQEHSE 1201
Query: 130 ------YTALEIKHEI---LPHIHKKISELESIKAVVTSK 38
+ + KHE+ L + K++ E E+I SK
Sbjct: 1202 QNKIDLHLVVSEKHELTKSLGAVQKELQEKENIMKREISK 1241
>gi|3123890 (AF031552) sensor kinase [Vibrio cholerae]
Length = 1146
Score = 32.1 bits (71), Expect = 5.6
Identities = 17/60 (28%), Positives = 34/60 (56%)
Query: 214 NITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKD 35
+ITELK +Q L + N++ A + R+H+ A+ + HE+ I + +E + + + S +
Sbjct: 597 DITELKETEQALRQSNEQALQAVEARNHFLAV-VSHELRTPIAAMLGLMEILASRLKSSE 655
>gi|3845242 (AE001409) hypothetical protein [Plasmodium falciparum]
Length = 558
Score = 32.1 bits (71), Expect = 5.6
Identities = 29/97 (29%), Positives = 50/97 (50%), Gaps = 2/97 (2%)
Query: 451 LVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHL 272
L +S + + S+ TM M + E K+ E ER+K DI I+D IH+
Sbjct: 64 LSESEKKILVKEIMGRSKKCTMKNNDM--LNEENKSCEKTKERKKQDIF---IHDNIIHM 118
Query: 271 -ENLKNELIPLEESYNEEKKN-ITELKNLKQKLEKYNKK 161
+N+K E+ +++ + K+N + KN K+K+ +KK
Sbjct: 119 NDNIKKEIKEEDQNGSNSKENDKKKKKNKKKKINNNDKK 157
>gi|90239|pir||A28298 myosin heavy chain beta, cardiac muscle - golden hamster (fragment)
>gi|49641|emb|CAA30256| (X07273) beta-myosin heavy chain
(974 AA); S2 fragment and LMM region [Mesocricetus
auratus]
Length = 974
Score = 32.1 bits (71), Expect = 5.6
Identities = 36/134 (26%), Positives = 64/134 (46%), Gaps = 3/134 (2%)
Query: 439 ACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAAR---INDLKIHLE 269
A + + NL E + L + + + E KA++ + ++ D L AR +N L
Sbjct: 8 ATENKVKNLTEEE--MAGLDQIIAKLTKEKKALQ-EAHQQALDALEARKTKVNTLTKSKV 64
Query: 268 NLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHI 89
L+ ++ LE S +EKK +L+ K+KLE Y K E + D K ++ +
Sbjct: 65 KLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGYLK--VTQESIMD---LENDKQQLDEKL 119
Query: 88 HKKISELESIKAVVTSK 38
KK EL ++ A + ++
Sbjct: 120 KKKDFELNALNARIENE 136
Score = 32.1 bits (71), Expect = 5.6
Identities = 37/152 (24%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 493 KYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKT 314
K+ + D+ +D+ S ++A ++ + + + + W + E E++ +++
Sbjct: 457 KHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKILAE---WKQKYEESQSELESSQKEA 513
Query: 313 DILAARINDLKI-------HLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLA 155
L+ + LK HLE K E ++E ++ + + +LEK K+L
Sbjct: 514 RSLSTELFKLKNAYEESLEHLETFKRENKNVQEEISDLTEQLGSTGKSIHELEKIRKQL- 572
Query: 154 DAEKVRDHYTALEIKHEILPHIHKKI----SELESIKAVVTSK 38
+AEK+ + +ALE L H KI E IKA + K
Sbjct: 573 EAEKL-ELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIERK 614
>gi|4468777|emb|CAB38186| (AJ004935) cytoplasmic intermediate filament protein [Urechis
caupo]
Length = 608
Score = 32.1 bits (71), Expect = 5.6
Identities = 29/112 (25%), Positives = 55/112 (48%), Gaps = 8/112 (7%)
Query: 361 ELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKN--------IT 206
ELE + + + E E +L +R+ND LE N L ++ EEKK ++
Sbjct: 180 ELEDRLHDTEGELENQRMLVSRLNDQMSQLEGEINGLRRRNDTLEEEKKRDKAEIARLLS 239
Query: 205 ELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDIAE 26
+ K ++ L+ + L DA + L + E + +H++ EL+ + A++ +E
Sbjct: 240 DNKRIRMDLDAESLALIDA---NNRCQTLGEEIEFMKAVHEQ--ELKELSALICRDTTSE 294
>gi|420071|pir||A43336 microtubule-vesicle linker CLIP-170 - human >gi|180622 (M97501)
cytoplasmic linker protein-170 alpha-2 [Homo sapiens]
Length = 1392
Score = 32.1 bits (71), Expect = 5.6
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 325 REKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAE 146
+EKT+ LA+ + D K L+NEL L+E+ KN+ EL K+ L N+K+ +
Sbjct: 1054 KEKTETLAS-LEDTKQTNAKLQNELDTLKEN---NLKNVEELNKSKELLTVENQKMEEFR 1109
Query: 145 K 143
K
Sbjct: 1110 K 1110
>gi|309727 (M77730) major merozoite surface antigen [Plasmodium falciparum]
Length = 214
Score = 31.7 bits (70), Expect = 7.3
Identities = 33/119 (27%), Positives = 60/119 (49%), Gaps = 7/119 (5%)
Query: 358 LEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKK---NITELKNLK 188
L+I+A E+D +L + + L+N+K+ + +E+ + KK NI EL
Sbjct: 54 LKIRANELD-------VLKKLVFGYRKPLDNIKDNVGKMEDYIKKNKKTIENINELIEES 106
Query: 187 QKLEKYNKKLADAEKVRDHYTA---LEIKHEILPHIHKKISELES-IKAVVTSKDIAEII 20
+K NK + E + Y A L I ++ L H IS LE I + +++I +++
Sbjct: 107 KKTIDQNKNADNEEGKKKLYQAQYNLFIYNKQLQEAHNLISVLEKRIDTLKKNENIKKLL 166
Query: 19 SRLTRI 2
+ +I
Sbjct: 167 EDIDKI 172
>gi|88933|pir||A24199 tropomyosin NM, skeletal muscle - human >gi|37430|emb|CAA27798|
(X04201) skeletal muscle tropomyosin (AA 1-285) [Homo
sapiens] >gi|225158|prf||1209280A tropomyosin [Homo
sapiens]
Length = 285
Score = 31.7 bits (70), Expect = 7.3
Identities = 25/74 (33%), Positives = 44/74 (58%), Gaps = 6/74 (8%)
Query: 364 VELEIKAIEIDYER--EKTDILAARINDLKIHLENLKNELIPLE---ESYNE-EKKNITE 203
V ++ IE D ER E+ ++ ++ ++L+ L+N+ N L LE E Y++ E K E
Sbjct: 166 VARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEE 225
Query: 202 LKNLKQKLEKYNKKLADAEK 143
+K L KL++ + AE+
Sbjct: 226 IKILTDKLKEAETRAEFAER 245
>gi|439846 (U04541) alpha-tropomyosin slow [Mus musculus]
Length = 285
Score = 31.7 bits (70), Expect = 7.3
Identities = 25/74 (33%), Positives = 44/74 (58%), Gaps = 6/74 (8%)
Query: 364 VELEIKAIEIDYER--EKTDILAARINDLKIHLENLKNELIPLE---ESYNE-EKKNITE 203
V ++ IE D ER E+ ++ ++ ++L+ L+N+ N L LE E Y++ E K E
Sbjct: 166 VARKLVIIEGDLERTGERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEE 225
Query: 202 LKNLKQKLEKYNKKLADAEK 143
+K L KL++ + AE+
Sbjct: 226 IKILTDKLKEAETRAEFAER 245
>gi|1334403|emb|CAA40768| (X57546) intron orf [Kluyveromyces lactis] >gi|228352|prf||1803222D
COXI1 intron 3 ORF [Kluyveromyces lactis]
Length = 319
Score = 31.7 bits (70), Expect = 7.3
Identities = 34/140 (24%), Positives = 73/140 (51%), Gaps = 14/140 (10%)
Query: 580 LRGLRERFEAHHGVKISDDALVFAVKSSKKYISNRR--LPDIAIDLVDSACSSAIVNLE- 410
+RG R + + ++GV+++ AL K ++ + R +P+ DL++ + I+ +
Sbjct: 174 VRGERLKGKIYYGVEMTTMALPCFTKLRHQFYNGRVKIMPNDLYDLLNYESLAHIIMGDG 233
Query: 409 --NESQPVTM------LKEQMWSVELEIKAIEID---YEREKTDILAARINDLKIHLENL 263
N+ +T+ +KE ++ + + +D ++ + ++ ++ +K+ N+
Sbjct: 234 SFNKGGGITLNLQSYTIKELIYFINILKIKFNLDCTLHKHKSYYVIYIKVKSIKLLYPNI 293
Query: 262 KNELIPLEESYNEEKKNITELKNLKQKLEKYNKK 161
KN +IP Y E K L QK +KYN K
Sbjct: 294 KNYIIP-SMKYKFEYK-------LLQKYDKYNNK 319
>gi|2496389|sp|Q49419|Y328_MYCGE HYPOTHETICAL PROTEIN MG328 >gi|1361774|pir||C64236 protein V (fcrV)
homolog - Mycoplasma genitalium (SGC3) >gi|3844908
(U39714) conserved hypothetical protein [Mycoplasma
genitalium]
Length = 756
Score = 31.7 bits (70), Expect = 7.3
Identities = 39/144 (27%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 493 KYISNRRLPDIAIDLVDSACSSAIVNLENES--QPVTMLKE----QMWSVELEIKAIEID 332
K I + P +D +D + ++ LEN + + LKE Q++ +E EI ++
Sbjct: 221 KRILKEQHPTKKVDELDDYNNKELL-LENADLKKQIDDLKENNNDQIFDLEQEIDDLKRR 279
Query: 331 YEREKT---------DILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKL 179
EK+ D L DL L+N + PL + NE EL+NLKQ+
Sbjct: 280 LSEEKSKHLHTKKLQDDLLQENRDLYEQLQNKPVAINPLSDEVNE------ELENLKQEK 333
Query: 178 EKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELES 62
+ +L + +++ + ++ + +LP ++ +I+EL++
Sbjct: 334 ALLSDQL---DALKNKSSNVQQQLALLPVLNNQINELQN 369
>gi|438880 (L24776) tropomyosin [Rattus norvegicus]
Length = 248
Score = 31.7 bits (70), Expect = 7.3
Identities = 25/74 (33%), Positives = 44/74 (58%), Gaps = 6/74 (8%)
Query: 364 VELEIKAIEIDYER--EKTDILAARINDLKIHLENLKNELIPLE---ESYNE-EKKNITE 203
V ++ IE D ER E+ ++ ++ ++L+ L+N+ N L LE E Y++ E K E
Sbjct: 129 VARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEE 188
Query: 202 LKNLKQKLEKYNKKLADAEK 143
+K L KL++ + AE+
Sbjct: 189 IKILTDKLKEAETRAEFAER 208
>gi|438882 (L24777) tropomyosin [Rattus norvegicus]
Length = 247
Score = 31.7 bits (70), Expect = 7.3
Identities = 25/74 (33%), Positives = 44/74 (58%), Gaps = 6/74 (8%)
Query: 364 VELEIKAIEIDYER--EKTDILAARINDLKIHLENLKNELIPLE---ESYNE-EKKNITE 203
V ++ IE D ER E+ ++ ++ ++L+ L+N+ N L LE E Y++ E K E
Sbjct: 129 VARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEE 188
Query: 202 LKNLKQKLEKYNKKLADAEK 143
+K L KL++ + AE+
Sbjct: 189 IKILTDKLKEAETRAEFAER 208
>gi|2688482 (AE001157) B. burgdorferi predicted coding region BB0553 [Borrelia
burgdorferi]
Length = 497
Score = 31.7 bits (70), Expect = 7.3
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 334 DYEREKTDILAARINDLKIHLENL-KNELIPLEESYNEEKKNITELKNLKQK--LEKYNK 164
D ++ K L I D K+ + + +N+L + E+Y + KNI +L K + E NK
Sbjct: 69 DPKKGKDLKLPENIRDKKLPQKRMDENDLKSVIENYENKIKNIEKLLKTKNQKTSENENK 128
Query: 163 KLADAEKVRDHYTAL--EIKHEIL---PHIHKKISELE 65
K+ EK Y L ++K+EI+ ++KKI E
Sbjct: 129 KIESIEKKAKKYEILTNKLKNEIVEIKKLLNKKIKPKE 166
>gi|114986|sp|P11709|BIK1_YEAST NUCLEAR FUSION PROTEIN BIK1 >gi|83350|pir||B27061 nuclear fusion
protein BIK1 - yeast (Saccharomyces cerevisiae)
>gi|5335|emb|CAA42356| (X59720) YCL029c, len:440
[Saccharomyces cerevisiae] >gi|171535 (M16717) BIK1
protein [Saccharomyces cerevisiae]
Length = 440
Score = 31.7 bits (70), Expect = 7.3
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 403 SQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESY-- 230
++ V +LK+Q+ +++ IE +E KT R LK+H ++L E L +
Sbjct: 303 NEDVELLKKQLE----QLRNIEDQFELHKTKWAKER-EQLKMHNDSLSKEYQNLSKELFL 357
Query: 229 -NEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALE 116
+ + E+ +L +KLE+ N+K+ E+ + TA+E
Sbjct: 358 TKPQDSSSEEVASLTKKLEEANEKIKQLEQAQAQ-TAVE 395
>gi|4210360|emb|CAA21070| (AL031683) dJ881E24.1.1 (1-Phosphatidylinisitol-4,5-bisphosphate
Phosphodiesterase Beta 1 (EC 3.1.4.11, PLC-Beta-1,
Phospholipase C-Beta-1, PLCB1, KIAA0581)) (isoform 1)
[Homo sapiens]
Length = 586
Score = 31.7 bits (70), Expect = 7.3
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 523 ALVFAVKSSKKYISNRRLPD-----IAIDL--VDSACSSAIVNLENESQP--VTMLKEQM 371
AL + K K S PD I DL +D+ + +++L+++ Q + + +EQ
Sbjct: 335 ALEKSAKKDSKKKSEPSSPDHGSSTIEQDLAALDAEMTQKLIDLKDKQQQQLLNLRQEQY 394
Query: 370 WSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNL 191
+S + + +RE +L ++ D+ +N N+L L+E +EK K L
Sbjct: 395 YSEKYQ--------KREHIKLLIQKLTDVAEECQN--NQLKKLKEICEKEK------KEL 438
Query: 190 KQKLEKYNKKLADAEKVRDHYTALEIKHEIL 98
K+K++K ++ K +D E K E++
Sbjct: 439 KKKMDKKRQEKITEAKSKDKSQMEEEKTEMI 469
>gi|4574238|gb|AAD23963|AF106851_2 (AF106851) FmhC [Staphylococcus aureus]
Length = 414
Score = 31.7 bits (70), Expect = 7.3
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 340 EIDYEREKTDILAARIND----LKIHLENLKNELIPLEESYNE---EKKNITELKNLKQK 182
EI ++ I +N+ LKI L ++NE++ + + NE K+N ++L L +
Sbjct: 229 EIYKDKAMLKIACINLNEYQDKLKIQLLKIENEMMTVNRALNENPNSKRNKSKLNQLNMQ 288
Query: 181 LEKYNKKLADAEKV 140
L N +++ E++
Sbjct: 289 LSSINNRISKTEEL 302
>gi|127759|sp|P14105|MYSN_CHICK MYOSIN HEAVY CHAIN, NONMUSCLE (NMMHC) >gi|104780|pir||A33977 myosin
heavy chain, nonmuscle - chicken >gi|212383 (M26510)
myosin heavy chain [Gallus gallus]
Length = 1959
Score = 31.7 bits (70), Expect = 7.3
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 14/138 (10%)
Query: 415 LENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNE----LI 248
L+ + V +L++Q + E K +E D E T L K L LKN+ +
Sbjct: 973 LKKLEEDVIVLEDQNLKLAKEKKLLE-DRMSEFTTNLTEEEEKSK-SLAKLKNKHEAMIT 1030
Query: 247 PLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIK-HEILPHIHKKISE 71
LEE E+K EL+ ++KLE D+ + D L+ + E+ + KK E
Sbjct: 1031 DLEERLRREEKQRQELEKTRRKLE------GDSSDLHDQIAELQAQIAELKIQLSKKEEE 1084
Query: 70 LESIKAVVTS---------KDIAEIISRLTRI 2
L++ A V K I E+ S++T +
Sbjct: 1085 LQAALARVEEEAAQKNMALKKIRELESQITEL 1116
>gi|3043686|dbj|BAA25507| (AB011153) KIAA0581 protein [Homo sapiens]
Length = 698
Score = 31.7 bits (70), Expect = 7.3
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 523 ALVFAVKSSKKYISNRRLPD-----IAIDL--VDSACSSAIVNLENESQP--VTMLKEQM 371
AL + K K S PD I DL +D+ + +++L+++ Q + + +EQ
Sbjct: 447 ALEKSAKKDSKKKSEPSSPDHGSSTIEQDLAALDAEMTQKLIDLKDKQQQQLLNLRQEQY 506
Query: 370 WSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNL 191
+S + + +RE +L ++ D+ +N N+L L+E +EK K L
Sbjct: 507 YSEKYQ--------KREHIKLLIQKLTDVAEECQN--NQLKKLKEICEKEK------KEL 550
Query: 190 KQKLEKYNKKLADAEKVRDHYTALEIKHEIL 98
K+K++K ++ K +D E K E++
Sbjct: 551 KKKMDKKRQEKITEAKSKDKSQMEEEKTEMI 581
>gi|3845248 (AE001410) hypothetical protein [Plasmodium falciparum]
Length = 665
Score = 31.7 bits (70), Expect = 7.3
Identities = 23/69 (33%), Positives = 38/69 (54%), Gaps = 3/69 (4%)
Query: 340 EIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQK---LEKY 170
+ID ++++TD K HLE +NE+I E+ ++++KKN K+K EK
Sbjct: 290 DIDDDKKETD---------KTHLEEEENEII--EKEFSDKKKNGKNKDTKKEKSKDTEKE 338
Query: 169 NKKLADAEKVRD 134
K + EK +D
Sbjct: 339 KSKDIEKEKSKD 350
>gi|259166|bbs|117575 myosin short subfragment-2, CM-S-2 [chickens, ventricular muscle,
Peptide, 259 aa]
Length = 259
Score = 31.7 bits (70), Expect = 7.3
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 496 KKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK 317
KK I + + ++ A + + NL E + L E + + E K+++ +++
Sbjct: 117 KKDIDDLEITLAKVEKEKHATENKVKNLTEE---MATLDENISKLTKEKKSLQEAHQQVL 173
Query: 316 TDILAA--RINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLE 176
D+ A ++N L L+ ++ LE S +EKK +L+ K+KLE
Sbjct: 174 DDLQAEEDKVNTLSKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLE 222
>gi|439288|emb|CAA79923| (Z21877) heavy chain of cytoplasmic dynein [Saccharomyces cerevisiae]
Length = 4092
Score = 31.7 bits (70), Expect = 7.3
Identities = 26/90 (28%), Positives = 49/90 (53%), Gaps = 8/90 (8%)
Query: 334 DYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITE-------LKNLKQKLE 176
+ +R++ D++ + K+ L+NL+ L+ E N + N+ E L NLK++
Sbjct: 3540 EMQRKREDLIKLN-TEYKLKLKNLEKRLL---EELNNSQGNMLENDELMVTLNNLKKEAM 3595
Query: 175 KYNKKLADAEKVRDHYTALEIKHEIL-PHIHKKISELE 65
KKL+++E+ + L ++ I+ H K S LE
Sbjct: 3596 NIEKKLSESEEFFPQFDNLVEEYSIIGKHSVKIFSMLE 3633
>gi|544197|sp|P36022|DYHC_YEAST DYNEIN HEAVY CHAIN, CYTOSOLIC (DYHC) >gi|539107|pir||S38128 dynein
heavy chain - yeast (Saccharomyces cerevisiae)
>gi|486511|emb|CAA82132| (Z28279) ORF YKR054c
[Saccharomyces cerevisiae]
Length = 4092
Score = 31.7 bits (70), Expect = 7.3
Identities = 26/90 (28%), Positives = 49/90 (53%), Gaps = 8/90 (8%)
Query: 334 DYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITE-------LKNLKQKLE 176
+ +R++ D++ + K+ L+NL+ L+ E N + N+ E L NLK++
Sbjct: 3540 EMQRKREDLIKLN-TEYKLKLKNLEKRLL---EELNNSQGNMLENDELMVTLNNLKKEAM 3595
Query: 175 KYNKKLADAEKVRDHYTALEIKHEIL-PHIHKKISELE 65
KKL+++E+ + L ++ I+ H K S LE
Sbjct: 3596 NIEKKLSESEEFFPQFDNLVEEYSIIGKHSVKIFSMLE 3633
>gi|3256520|dbj|BAA29203| (AP000001) 300aa long hypothetical protein [Pyrococcus horikoshii]
Length = 300
Score = 31.7 bits (70), Expect = 7.3
Identities = 24/134 (17%), Positives = 63/134 (46%), Gaps = 8/134 (5%)
Query: 415 LENESQPVTMLKEQM------WSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNE 254
L+ E + + + E++ W + + K +E+ REK A+ +++ ++ LK
Sbjct: 20 LQEEKRKIEIKLEELQKELNTWIQKRDEKNLEVKRLREKAREFKAKRDEINQRIKELKKN 79
Query: 253 LIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHI--HKK 80
+ + + + E + + + ++ + EK+ + LE + + P+I ++
Sbjct: 80 RDEINAKLDLLYQEVLEYRTKRDEFKQLRRLKMPKEKIEERIEKLEWELQTTPNISPERE 139
Query: 79 ISELESIKAVVTSKDIAEIISR 14
++ I+ + T +I + I R
Sbjct: 140 KQIVDQIQVLATELEIIQQIER 161
>gi|586540|sp|P38272|YBY0_YEAST HYPOTHETICAL 47.4 KD PROTEIN IN OPY1-AGP2 INTERGENIC REGION
>gi|626519|pir||S45999 hypothetical protein YBR130c -
yeast (Saccharomyces cerevisiae)
>gi|496861|emb|CAA53489| (X75891) YBR1005 [Saccharomyces
cerevisiae] >gi|536419|emb|CAA85087| (Z35999) ORF
YBR130c [Saccharomyces cerevisiae]
>gi|1582517|prf||2118402E YBR1005 gene [Saccharomyces
cerevisiae]
Length = 425
Score = 31.7 bits (70), Expect = 7.3
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 19/146 (13%)
Query: 502 SSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPVTMLKEQMWSVELEIKAIE----I 335
+S + S+ R+ + D +D + NL+ +Q +L + + E K +E +
Sbjct: 35 TSSQNASSSRVIESLHDQIDMLTKT---NLQLTTQSQNLLSKLELAQSKESKLLENLNLL 91
Query: 334 DYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNL-----------K 188
E E + + R N L+ L+ + L YNE+K+ + +L L
Sbjct: 92 KNENENLNSIFERKNK---KLKELEKDYSELSNRYNEQKEKMDQLSKLAKNSSAIEQSCS 148
Query: 187 QKLE----KYNKKLADAEKVRDHYTALEIKHEILPHIHKKISELE 65
+KL+ YN L RDHY+ + + +++KI LE
Sbjct: 149 EKLQNMEVNYNSLLESQNLYRDHYS------DEISKLNEKIGLLE 187
>gi|130223|sp|P10687|PIP1_RAT 1-PHOSPHATIDYLINOSITOL-4,5-BISPHOSPHATE PHOSPHODIESTERASE BETA 1
(PLC-BETA-1) (PHOSPHOLIPASE C-BETA-1) (PLC-I) (PLC-154)
>gi|91896|pir||A28821
1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase
(EC 3.1.4.11) I - rat >gi|206218 (M20636) phospholipase
C-1 [Rattus sp.]
Length = 1216
Score = 31.7 bits (70), Expect = 7.3
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 9/142 (6%)
Query: 523 ALVFAVKSSKKYISNRRLPD-----IAIDL--VDSACSSAIVNLENESQP--VTMLKEQM 371
AL + K K S PD I DL +D+ + +++L+++ Q + + +EQ
Sbjct: 965 ALEKSAKKDSKKKSEPSSPDHGSSAIEQDLAALDAEMTQKLIDLKDKQQQQLLNLRQEQY 1024
Query: 370 WSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNL 191
+S + + +RE +L ++ D+ +N N+L L+E +EK K L
Sbjct: 1025 YSEKYQ--------KREHIKLLIQKLTDVAEECQN--NQLKKLKEICEKEK------KEL 1068
Query: 190 KQKLEKYNKKLADAEKVRDHYTALEIKHEIL 98
K+K++K ++ K +D E K E++
Sbjct: 1069 KKKMDKKRQEKITEAKSKDKSQMEEEKTEMI 1099
>gi|4210989 (AF121781) unknown [Homo sapiens]
Length = 670
Score = 31.7 bits (70), Expect = 7.3
Identities = 24/97 (24%), Positives = 51/97 (51%), Gaps = 1/97 (1%)
Query: 394 VTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIH-LENLKNELIPLEESYNEEK 218
+++ K+ W+ L I + +R D +A RI ++H ++ LKNEL + +++ +
Sbjct: 112 ISVEKKHTWNASLFNSQIHMIAQRR--DAMAHRILSARLHKIKGLKNELADM---HHKLE 166
Query: 217 KNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHE 104
+TE + LKQ ++ K + E +++ + KH+
Sbjct: 167 AILTENQFLKQLQLRHLKAIGKYENSQNNLPQIMAKHQ 204
>gi|1351266|sp|P16154|TOXA_CLODI TOXIN A >gi|40441|emb|CAA36094| (X51797) Toxin A (AA 1-2710)
[Clostridium difficile] >gi|1770135|emb|CAA63564|
(X92982) tcdA [Clostridium difficile]
Length = 2710
Score = 31.7 bits (70), Expect = 7.3
Identities = 40/169 (23%), Positives = 82/169 (47%), Gaps = 18/169 (10%)
Query: 568 RERFEAHHGVKISDDALVFAVKSSKKYI-----------SNRRLPDIAIDLVDSACSSAI 422
R+ AH G I+ + + + SSK+YI ++ +P +A + + +
Sbjct: 753 RKELLAHSGKWINKEEAIMSDLSSKEYIFFDSIDNKLKAKSKNIPGLA--SISEDIKTLL 810
Query: 421 VNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK--TDILAARINDLKIH---LENLKN 257
++ +L ++E I I YE+ + +I+ I+DL LEN+ +
Sbjct: 811 LDASVSPDTKFILNNLKLNIESSI-GDYIYYEKLEPVKNIIHNSIDDLIDEFNLLENVSD 869
Query: 256 ELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHY--TALEIKHEILPHIHK 83
EL L++ N ++K + +++ + Y+ + + Y T EI + HI K
Sbjct: 870 ELYELKKLNNLDEKYLISFEDISKNNSTYSVRFINKSNGESVYVETEKEIFSKYSEHITK 929
Query: 82 KISELES 62
+IS +++
Sbjct: 930 EISTIKN 936
>gi|3915315|sp|Q29466|VPP1_BOVIN CLATHRIN-COATED VESICLE/SYNAPTIC VESICLE PROTON PUMP 116 KD SUBUNIT
(VACUOLAR PROTON PUMP SUBUNIT 1) >gi|1083097|pir||A54163
vacuolar ATPase (EC 3.6.1.-) 116k chain long form -
bovine >gi|469232 (L31770) vacuolar H+-ATPase subunit
[Bos taurus]
Length = 838
Score = 31.7 bits (70), Expect = 7.3
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 289 DLKIHLENLKNELIPLEESYNEEKKNITELKNLK---QKLEKYNKKLADAEKVRDHYTAL 119
DL+ + E ++NEL + + K+N EL LK +K +++ ++AD + + + + L
Sbjct: 96 DLEANFEKIENELKEINTNQEALKRNFLELTELKFILRKTQQFFDEMADPDLLEESSSLL 155
Query: 118 E 116
E
Sbjct: 156 E 156
>gi|101144|pir||S17997 gene COX1 intron 3 protein - yeast (Kluyveromyces marxianus var.
lactis) mitochondrion (SGC2)
Length = 643
Score = 31.7 bits (70), Expect = 7.3
Identities = 34/140 (24%), Positives = 73/140 (51%), Gaps = 14/140 (10%)
Query: 580 LRGLRERFEAHHGVKISDDALVFAVKSSKKYISNRR--LPDIAIDLVDSACSSAIVNLE- 410
+RG R + + ++GV+++ AL K ++ + R +P+ DL++ + I+ +
Sbjct: 498 VRGERLKGKIYYGVEMTTMALPCFTKLRHQFYNGRVKIMPNDLYDLLNYESLAHIIMGDG 557
Query: 409 --NESQPVTM------LKEQMWSVELEIKAIEID---YEREKTDILAARINDLKIHLENL 263
N+ +T+ +KE ++ + + +D ++ + ++ ++ +K+ N+
Sbjct: 558 SFNKGGGITLNLQSYTIKELIYFINILKIKFNLDCTLHKHKSYYVIYIKVKSIKLLYPNI 617
Query: 262 KNELIPLEESYNEEKKNITELKNLKQKLEKYNKK 161
KN +IP Y E K L QK +KYN K
Sbjct: 618 KNYIIP-SMKYKFEYK-------LLQKYDKYNNK 643
>gi|464482|sp|P33332|SEC3_YEAST EXOCYST COMPLEX COMPONENT SEC3 (PSL1 PROTEIN) >gi|539345|pir||S41794
PSL1 protein - yeast (Saccharomyces cerevisiae)
>gi|347716 (L22204) Psl1p [Saccharomyces cerevisiae]
>gi|603600 (U18778) Sec3p [Saccharomyces cerevisiae]
Length = 1336
Score = 31.7 bits (70), Expect = 7.3
Identities = 31/106 (29%), Positives = 61/106 (57%), Gaps = 10/106 (9%)
Query: 481 NRRLPDIAIDLVD-SACSSAIVNLENES---QPVTMLKEQMWSVELEI-KAIEIDYEREK 317
+R +P +++ L++ S S+ I N+E++ Q + K+ +W+ E+ K + +D E
Sbjct: 686 HRIIPTLSLFLMEMSNFSNDIENVESQDNGLQVESANKKLLWNTLDELLKTVSLD-EISL 744
Query: 316 TDILAARINDLKIH-LENLKNELIPLEESY----NEEKKNITELKNLKQKLEKYNK 164
+L I + + +EN N L+ ++ NE + N+ E+ LKQ+L+ Y K
Sbjct: 745 NQLLECPIREKNLPWMENQLNLLLKAFQAIGSDGNEVEYNLREISGLKQRLQFYEK 800
>gi|139352|sp|P25286|VPP1_RAT CLATHRIN-COATED VESICLE/SYNAPTIC VESICLE PROTON PUMP 116 KD SUBUNIT
(VACUOLAR PROTON PUMP SUBUNIT 1) >gi|112472|pir||B38656
vacuolar proton pump 116K chain - rat >gi|206430
(M58758) proton pump polypeptide [Rattus norvegicus]
Length = 838
Score = 31.7 bits (70), Expect = 7.3
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 289 DLKIHLENLKNELIPLEESYNEEKKNITELKNLK---QKLEKYNKKLADAEKVRDHYTAL 119
DL+ + E ++NEL + + K+N EL LK +K +++ ++AD + + + + L
Sbjct: 96 DLEANFEKIENELKEINTNQEALKRNFLELTELKFILRKTQQFFDEMADPDLLEESSSLL 155
Query: 118 E 116
E
Sbjct: 156 E 156
>gi|1084193|pir||S52537 emm L 15 protein - Streptococcus pyogenes >gi|914110|bbs|160663
(S75411) EmmL15=protein H homolog [Streptococcus
pyogenes, type M15, opacity factor-positive serotype,
Peptide, 377 aa] [Streptococcus pyogenes]
Length = 377
Score = 31.7 bits (70), Expect = 7.3
Identities = 30/119 (25%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 412 ENESQPVTMLKEQMWSVELEIKAIEIDYER--EKTDILAARINDLKIHLENLKNELIPLE 239
E S+ + +E VE ++ A+ ++++ E+ I A L + L+ L
Sbjct: 199 EESSRDLEASRESKKKVEADLAALTAEHQKLKEEKQISDASRQGLSVTLKRL-------- 250
Query: 238 ESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTA-LEIKHE-----ILPHIHKKI 77
E+ + + ++ E + Q LEK NK+L + +K+ + A L+ K E + + K+
Sbjct: 251 EAKKKVEADLAEANSKLQALEKLNKELEEGKKLSEKEKAELQAKLEAEAKALKEQLAKQA 310
Query: 76 SELESIK 56
EL +K
Sbjct: 311 EELAKLK 317
>gi|1398903|dbj|BAA13044| (D86214) Ca2+ dependent activator protein for secretion [Mus
musculus]
Length = 1382
Score = 31.7 bits (70), Expect = 7.3
Identities = 28/122 (22%), Positives = 60/122 (48%), Gaps = 3/122 (2%)
Query: 589 ITILRGLRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLE 410
+TIL G+ + + + L F VK++ KY+ +P +D+ D A V
Sbjct: 1215 VTILEGVLAKLSRYDEGTLFSSFLSFTVKAASKYVD---VPKPGMDVAD-----AYVTFV 1266
Query: 409 NESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARIN---DLKIHLENLKNELIPLE 239
SQ V L++++ + E+ I+ + + +I+ + DL++H+ LK + ++
Sbjct: 1267 RHSQDV--LRDKV-NEEMYIERLFDQWYNSSMNIICTWLTDRMDLQLHIYQLKTLIRMVK 1323
Query: 238 ESYNE 224
++Y +
Sbjct: 1324 KTYRD 1328
>gi|2370337|emb|CAA04656| (AJ001296) cytokeratin 8 [Notophthalmus viridescens]
Length = 496
Score = 31.7 bits (70), Expect = 7.3
Identities = 39/153 (25%), Positives = 62/153 (40%)
Query: 601 ISDGITILRGLRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAI 422
++D I LR L +ISD ++V ++ S++K + + D+ D A S
Sbjct: 213 LTDEINFLRQLYAEELNELQCQISDTSVVLSMDSNRKLDLDSIIADVKAQYEDIANKS-- 270
Query: 421 VNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPL 242
LE E+ +I Y+ +T A R D L N KNE+ +
Sbjct: 271 -RLEAENM------------------YQIKYQELQTS--AGRYGD---DLRNTKNEIAEM 306
Query: 241 EESYNEEKKNITELKNLKQKLEKYNKKLADAEK 143
N + I LKN + LE +A+AE+
Sbjct: 307 NRIINRLQSEIDALKNQRANLE---AAIAEAEE 336
>gi|98593|pir||A37052 toxin A - Clostridium difficile >gi|144926 (M30307) toxin A
[Clostridium difficile]
Length = 2710
Score = 31.7 bits (70), Expect = 7.3
Identities = 40/169 (23%), Positives = 82/169 (47%), Gaps = 18/169 (10%)
Query: 568 RERFEAHHGVKISDDALVFAVKSSKKYI-----------SNRRLPDIAIDLVDSACSSAI 422
R+ AH G I+ + + + SSK+YI ++ +P +A + + +
Sbjct: 753 RKELLAHSGKWINKEEAIMSDLSSKEYIFFDSIDNKLKAKSKNIPGLA--SISEDIKTLL 810
Query: 421 VNLENESQPVTMLKEQMWSVELEIKAIEIDYEREK--TDILAARINDLKIH---LENLKN 257
++ +L ++E I I YE+ + +I+ I+DL LEN+ +
Sbjct: 811 LDASVSPDTKFILNNLKLNIESSI-GDYIYYEKLEPVKNIIHNSIDDLIDEFNLLENVSD 869
Query: 256 ELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHY--TALEIKHEILPHIHK 83
EL L++ N ++K + +++ + Y+ + + Y T EI + HI K
Sbjct: 870 ELYELKKLNNLDEKYLISFEDISKNNSTYSVRFINKSNGESVYVETEKEIFSKYSEHITK 929
Query: 82 KISELES 62
+IS +++
Sbjct: 930 EISTIKN 936
>gi|2621615 (AE000837) intracellular protein transport protein
[Methanobacterium thermoautotrophicum]
Length = 837
Score = 31.7 bits (70), Expect = 7.3
Identities = 32/134 (23%), Positives = 59/134 (43%), Gaps = 7/134 (5%)
Query: 469 PDIAIDLVDSA------CSSAIVNLENESQPVTMLKEQMWSVELEIKAIEIDYEREKTDI 308
PD D + SA S I +L NE L +++ E + E+ RE +
Sbjct: 435 PDYINDKLSSARERKGSVESRIADLRNEIMNKNELMKRI--AEYKRSREELRLLREDLEK 492
Query: 307 LAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHY 128
+ + L+N++ + +EE E +K I ELK+ + K +L ++ Y
Sbjct: 493 RIKECHRRRESLDNIRERIRQIEEGKAESEKLIEELKDAESDFNKVEHELKSLREMESGY 552
Query: 127 TA-LEIKHEILPHIHKKISEL 68
++ L + + +I+EL
Sbjct: 553 SSKLAAASGRMDQLRTRITEL 573
>gi|3915316|sp|Q93050|VPP1_HUMAN CLATHRIN-COATED VESICLE/SYNAPTIC VESICLE PROTON PUMP 116 KD SUBUNIT
(VACUOLAR PROTON PUMP SUBUNIT 1)
>gi|1638835|emb|CAA96077| (Z71460) vacuolar-type
H(+)-ATPase 115 kDa subunit [Homo sapiens] >gi|1654385
(U73006) vacuolar-type H(+) ATPase 115 kDa subunit [Homo
sapiens]
Length = 831
Score = 31.7 bits (70), Expect = 7.3
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 289 DLKIHLENLKNELIPLEESYNEEKKNITELKNLK---QKLEKYNKKLADAEKVRDHYTAL 119
DL+ + E ++NEL + + K+N EL LK +K +++ ++AD + + + + L
Sbjct: 96 DLEANFEKIENELKEINTNQEALKRNFLELTELKFILRKTQQFFDEMADPDLLEESSSLL 155
Query: 118 E 116
E
Sbjct: 156 E 156
>gi|2648520 (AE000963) A. fulgidus predicted coding region AF2031
[Archaeoglobus fulgidus]
Length = 286
Score = 31.7 bits (70), Expect = 7.3
Identities = 40/187 (21%), Positives = 87/187 (46%), Gaps = 19/187 (10%)
Query: 571 LRERFEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLVDSACSSAIVNLENESQPV 392
+RE A VK D L VK + + R +D + +++ +P+
Sbjct: 45 VREMLAATKEVKAKRDELNAKVKEIR---AKRNEIFKEVDALYKEVDKLRRSIDKGGRPL 101
Query: 391 TMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNEL----------IPL 242
+++++ +E + + + E+E+ L RI L+ LE K +L +
Sbjct: 102 GEIEKEIRRLEFKQQTAVLTIEKERA--LVERIAKLRKELEERKAQLERHEEFKRLISRI 159
Query: 241 EESYNEEKKNITELKNLKQKLEKYNKKLADAEKVRDHYTALEIKHEILPHIHKKISEL-- 68
E ++ ++ + ELK ++ +KY+++L ++ ++ ++ +H+K E
Sbjct: 160 RELKDQARELLNELKAYAEEADKYHEQLTQM------FSEIDEMRKLADEMHEKFIESKK 213
Query: 67 -------ESIKAVVTSKDIAEIISRL 11
E+IK KD+ ++I L
Sbjct: 214 EADRCHNEAIKRRKDIKDLEKVIKAL 239
>gi|3256672|dbj|BAA29355| (AP000001) 279aa long hypothetical protein [Pyrococcus horikoshii]
Length = 279
Score = 31.7 bits (70), Expect = 7.3
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 325 REKTDILAARINDLKIHLENLKNELIPLE-ESYNEEKKNITELKNLKQKLEKYNKKL-AD 152
+E+ + L LK E +K +L E E+ + KK I ELK + LEK K+L +
Sbjct: 132 KEEYEKLLKEYEKLKKEFEEVKAKLEATELENLEKAKKEIEELKERIETLEKEKKELEKE 191
Query: 151 AEKVRDHYTALEIKHEILPHIHKKISELESIKAVVTS--KDIAEIISRL 11
++ + E K + + + +K+ E E + KD E I L
Sbjct: 192 LKESKVKLMEYEAKAKKVEELEEKLKEYEEKSREIEGRIKDYEEKIREL 240
Score = 31.7 bits (70), Expect = 7.3
Identities = 30/87 (34%), Positives = 50/87 (56%), Gaps = 30/87 (34%)
Query: 433 SSAIVNLENESQPVTMLKEQMWSVELEIKAIE----------IDYE-------------- 326
++ + NLE + + LKE++ ++E E K +E ++YE
Sbjct: 158 ATELENLEKAKKEIEELKERIETLEKEKKELEKELKESKVKLMEYEAKAKKVEELEEKLK 217
Query: 325 --REKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKN----LKQKLEK 173
EK+ + RI D + + L+ E LEE N + I LKN K+ LE+
Sbjct: 218 EYEEKSREIEGRIKDYEEKIRELEEEKKGLEEKINVLENRIENLKNGIRSAKEALER 274
>gi|1362865|pir||A36881 MPM2-reactive phosphoprotein 1 - human (fragment) >gi|292329
(L16782) putative M phase phosphoprotein (MPP1 [Homo
sapiens]
Length = 566
Score = 31.7 bits (70), Expect = 7.3
Identities = 24/106 (22%), Positives = 52/106 (48%), Gaps = 2/106 (1%)
Query: 322 EKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQKLEKYNKKLADAEK 143
++T+ L ++ +NLK +L EE Y + K+ +T+ K ++ +K + D +K
Sbjct: 1 QETEKLKEELSASSARTQNLKADLQRKEEDYADLKEKLTDAKKQIKQEQKEVSVMRDEDK 60
Query: 142 -VRDHYTALE-IKHEILPHIHKKISELESIKAVVTSKDIAEIISRLTR 5
+R LE K++ + K ++ +K + ++ + E I + R
Sbjct: 61 LLRIKINELEKKKNQCSQELDMKQRTIQQLKEQLNNQKVEEAIQQYER 108
>gi|1263021 (U39838) M protein [Streptococcus pyogenes]
Length = 558
Score = 31.7 bits (70), Expect = 7.3
Identities = 40/178 (22%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Query: 538 KISDDALVFAVKSSKKYISNRRLPDI--AIDLVDSACSSAIVNLENESQPVTMLKEQMWS 365
KI DD K + N +L A++ A S LE++ Q + K+ + S
Sbjct: 57 KIIDDLDDLDAKEHELQQQNEKLSTQKQALESQKQALESQKQALESQKQALESQKQALES 116
Query: 364 VELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEEKKNITELKNLKQ 185
+ ++ D E + D L ++ + H++ L+++ LE + L++ KQ
Sbjct: 117 QKQALEGRTQDLEGQTQD-LESQKQAPESHIQALESQTQDLESQTQALESQKQALESRKQ 175
Query: 184 KLEKYNKKLADAEKVRDHYTALEIKH------EILPHIHKKISELESIKAVVTSKDIAEI 23
LE+ NK+L+ ++ + E +H E L KK+ + ++ T K + E+
Sbjct: 176 ALEEQNKQLSTQKETLERQVQ-EAQHNNNELTEKLDETQKKLVNKQQ-ESEETKKTLNEL 233
Query: 22 ISRLTR 5
+ + +
Sbjct: 234 LDKTVK 239
>gi|4154552 (AE001444) putative [Helicobacter pylori J99]
Length = 327
Score = 31.7 bits (70), Expect = 7.3
Identities = 40/167 (23%), Positives = 72/167 (42%), Gaps = 4/167 (2%)
Query: 571 LRER-FEAHHGVKISDDALVFAVKSSKKYISNRRLPDIAIDLV--DSACSSAIVNLENES 401
LRER + A ++ D K+ K +I+ +L +L + + S I LE+ +
Sbjct: 33 LREREYLAAETSELKDANDQLRQKNDKLFITKDKLTKENTELFAENESLSVKISGLEHSN 92
Query: 400 QPVTMLKEQMWSVELEIKAIEIDYEREKTDILAARINDLKIHLENLKNELIPLEESYNEE 221
+ ++ + E+K + +E T +LAAR + L E L
Sbjct: 93 DQLWQNNNKLTKEKAELKTEKDILAKENTRLLAAR--------DRLTEEKRELTTEKERL 144
Query: 220 KKNITELKNLKQKLEKYNKKL-ADAEKVRDHYTALEIKHEILPHIHKKISE 71
K+ TEL + +L K NK L + +K+ TAL + + L ++ +
Sbjct: 145 KRENTELTHKITELTKENKALTTENDKLNHQVTALTNERDSLEQERARLQD 195
>gi|4493907|emb|CAB39016| (AL034558) predicted using hexExon; MAL3P2.29 (PFC0300c), 60S
Ribosomal protein L7, len: 242 aa; Similarity to 60S
ribosomal protein L7. S.cerevisiae 40 ribosomal protein
L7-A (SW:RL7A_YEAST) BLAST Score: 547, sum P(1) =
4.7e...
Length = 241
Score = 31.7 bits (70), Expect = 7.3
Identities = 22/70 (31%), Positives = 38/70 (53%), Gaps = 4/70 (5%)
Query: 352 IKAIEIDYEREKTDILAARINDLKIHLENLKNEL----IPLEESYNEEKKNITELKNLKQ 185
++A +++ +E A +I LK+ + +N+L + EE Y E+K I E LK+
Sbjct: 4 LRAKKVNKNKELKQAAAKKIKTLKLINKKKRNDLRQRTLRYEEEYESERKKIIE---LKR 60
Query: 184 KLEKYNKKLADAEK 143
+ K N +AEK
Sbjct: 61 EARKNNCFYREAEK 74
>gi|136085|sp|P06753|TPM3_HUMAN TROPOMYOSIN ALPHA CHAIN, SKELETAL MUSCLE TYPE
Length = 284
Score = 31.7 bits (70), Expect = 7.3
Identities = 25/74 (33%), Positives = 44/74 (58%), Gaps = 6/74 (8%)
Query: 364 VELEIKAIEIDYER--EKTDILAARINDLKIHLENLKNELIPLE---ESYNE-EKKNITE 203
V ++ IE D ER E+ ++ ++ ++L+ L+N+ N L LE E Y++ E K E
Sbjct: 165 VARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEE 224
Query: 202 LKNLKQKLEKYNKKLADAEK 143
+K L KL++ + AE+
Sbjct: 225 IKILTDKLKEAETRAEFAER 244
>gi|2832859|emb|CAA16814| (AL021728) 1-evidence=predicted by content;
1-method=genefinder;084; 1-method_score=120.25;
1-evidence_end; 2-evidence=predicted by motif;
2-match_accession=PROSITE:PS00028;
2-match_description=Zinc finger, C2H2 type, domain.; ...
Length = 591
Score = 31.7 bits (70), Expect = 7.3
Identities = 20/98 (20%), Positives = 51/98 (51%), Gaps = 5/98 (5%)
Query: 310 ILAARINDLKIHLENLKNELIPLEE-----SYNEEKKNITELKNLKQKLEKYNKKLADAE 146
++ +N+ + ++ NL EL + + +EE++ +TE + +L + +LA +
Sbjct: 129 VMIEMLNEEQENVANLDEELAEEDRRIFAMTVDEEEEFLTEEVDQDDELSEEEHQLAQSG 188
Query: 145 KVRDHYTALEIKHEILPHIHKKISELESIKAVVTSKDIAEIIS 17
++ + +E HE P + ++ + +VT +D E+++
Sbjct: 189 DQQEEHITMESVHEFQPAEVEYVTIKNEFETIVTEEDEFEVMN 231
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Apr 17, 1999 5:33 AM
Number of letters in database: 113,023,754
Number of sequences in database: 369,800
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 140124850
Number of Sequences: 369800
Number of extensions: 2549335
Number of successful extensions: 13820
Number of sequences better than 10.0: 1045
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 426
Number of HSP's that attempted gapping in prelim test: 12967
Number of HSP's gapped (non-prelim): 1125
length of query: 296
length of database: 113023754
effective HSP length: 54
effective length of query: 242
effective length of database: 93054554
effective search space: 22519202068
effective search space used: 22519202068
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 69 (31.3 bits)