BLASTX 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 11VII4R
         (817 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           369,800 sequences; 113,023,754 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|9872|emb|CAA46646| (X65738) ATPase I [Plasmodium falciparum]        31  8.6
gi|323106|pir||A44396 P-type cation translocating ATPase - Plasm...    31  8.6


>gi|9872|emb|CAA46646| (X65738) ATPase I [Plasmodium falciparum]
            Length = 1956
            
 Score = 31.3 bits (69), Expect = 8.6
 Identities = 10/22 (45%), Positives = 16/22 (72%)

Query: 686  KNNDTEIFNHNYIYTEGFVRNK 621
            KN+D  ++N NYIY + ++ NK
Sbjct: 1507 KNDDNNVYNKNYIYNKNYIYNK 1528



>gi|323106|pir||A44396 P-type cation translocating ATPase - Plasmodium falciparum
            Length = 1984
            
 Score = 31.3 bits (69), Expect = 8.6
 Identities = 10/22 (45%), Positives = 16/22 (72%)

Query: 686  KNNDTEIFNHNYIYTEGFVRNK 621
            KN+D  ++N NYIY + ++ NK
Sbjct: 1535 KNDDNNVYNKNYIYNKNYIYNK 1556


  Database: Non-redundant GenBank CDS
  translations+PDB+SwissProt+SPupdate+PIR
    Posted date:  Apr 17, 1999  5:33 AM
  Number of letters in database: 113,023,754
  Number of sequences in database:  369,800
  
Lambda     K      H
   0.318    0.135     0.00 

Gapped
Lambda     K      H
   0.270   0.0470 4.94e-324 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112624684
Number of Sequences: 369800
Number of extensions: 1650295
Number of successful extensions: 2899
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2893
Number of HSP's gapped (non-prelim): 6
length of query: 272
length of database: 113023754
effective HSP length: 54
effective length of query: 217
effective length of database: 93054554
effective search space: 20192838218
effective search space used: 20192838218
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 69 (31.3 bits)