BLASTX 2.0.8 [Jan-05-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 11VII25R
(753 letters)
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
368,476 sequences; 112,640,273 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|3540188 (AC004122) Hypothetical protein [Arabidopsis thaliana] 68 7e-11
gi|1363743|pir||S59387 probable membrane protein YLR241w - yeast... 64 1e-09
gi|2950458|emb|CAA17808| (AL022071) hypothetical protein [Schizo... 59 3e-08
gi|4263507|gb|AAD15333| (AC004044) hypothetical protein [Arabido... 59 4e-08
gi|3924615 (AF069442) hypothetical protein [Arabidopsis thaliana] 59 4e-08
gi|2781347 (AC003113) F24O1.3 [Arabidopsis thaliana] 58 6e-08
gi|3157932 (AC002131) Similar to hypothetical protein HYP1 gb|Z9... 55 4e-07
gi|2961357|emb|CAA18115| (AL022140) putative protein [Arabidopsi... 53 2e-06
gi|1076334|pir||S51583 hypothetical protein HYP1 - Arabidopsis t... 53 3e-06
gi|498707|emb|CAA55187| (X78422) HYP1 [Arabidopsis thaliana] 53 3e-06
gi|2425117 (AF019983) similar to S. cerevisiae probable membrane... 47 1e-04
gi|1175480|sp|Q09809|YAB9_SCHPO HYPOTHETICAL 90.9 KD PROTEIN C2G... 45 5e-04
gi|1175441|sp|Q09766|YA7D_SCHPO HYPOTHETICAL 98.4 KD PROTEIN C24... 39 0.035
gi|465929|sp|P34472|YMH5_CAEEL HYPOTHETICAL 136.3 KD PROTEIN F58... 34 1.5
gi|4493932|emb|CAB38968| (AL034556) predicted using hexExon; MAL... 33 2.0
gi|2497148|sp|Q03153|YMY8_YEAST HYPOTHETICAL 70.4 KD PROTEIN IN ... 32 3.5
gi|1707226 (U80843) C32B5.9 gene product [Caenorhabditis elegans] 32 4.5
gi|2244900|emb|CAB10322| (Z97338) similarity to hypothetical pro... 32 4.5
gi|2119581|pir||I55651 noradrenaline transporter - bovine >gi|48... 32 4.5
gi|1709356|sp|P51143|NTNO_BOVIN SODIUM-DEPENDENT NORADRENALINE T... 32 4.5
gi|128612|sp|P27922|NTDO_BOVIN SODIUM-DEPENDENT DOPAMINE TRANSPO... 32 4.5
gi|2342870 (U72877) L-epinephrine transporter [Rana catesbeiana] 32 5.9
gi|2598034|emb|CAA73665| (Y13223) norepinephrine transporter [Ra... 32 5.9
gi|3914158|sp|O55192|NTNO_MOUSE SODIUM-DEPENDENT NORADRENALINE T... 32 5.9
gi|3786487 (AF098992) F53C3.9 gene product [Caenorhabditis elegans] 32 5.9
gi|128616|sp|P23975|NTNO_HUMAN SODIUM-DEPENDENT NORADRENALINE TR... 31 7.8
gi|4049672 (AF063866) ORF MSV077 hypothetical protein [Melanoplu... 31 7.8
>gi|3540188 (AC004122) Hypothetical protein [Arabidopsis thaliana]
Length = 509
Score = 67.9 bits (163), Expect = 7e-11
Identities = 47/149 (31%), Positives = 75/149 (49%), Gaps = 3/149 (2%)
Query: 528 SLIYKIFFGSKTTRERYQTIKPTPINFGIEIPIVLLSIPMALTYAVLTPIMLVVGAIYFF 349
+LI K+ +K E Y+T++ + EIP +LL + T +V+ P++L IYFF
Sbjct: 264 NLIAKVIVKNK--EESYETLR---FPYHTEIPRLLLFGLLGFTNSVIAPLILPFLLIYFF 318
Query: 348 GVYYVYKNDXIYYSGTEIXTGGSYWNFCSNFIVETLMLFQILTAIELFVMGFKMTALC-- 175
Y +YKN I T+ +GG YW N + +L+L Q+ I L G K++ +
Sbjct: 319 FAYLIYKNQIINVYITKYESGGQYWPVFHNTTIFSLILSQV---IALGFFGLKLSTVASG 375
Query: 174 -MVPLIILTFYYKQNVLSLFKDSCSFYPLNVL 82
+PLI+LT + + F YP +L
Sbjct: 376 FTIPLILLTLLFSEYCRQRFAPIFQKYPAEIL 407
>gi|1363743|pir||S59387 probable membrane protein YLR241w - yeast (Saccharomyces cerevisiae)
>gi|662339 (U20865) Ylr241wp [Saccharomyces cerevisiae]
Length = 782
Score = 63.6 bits (152), Expect = 1e-09
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 5/159 (3%)
Query: 501 SKTTRERYQTIKPTPINFGIEIPIVLLSIPMALTYAVLTPIMLVVGAIYFFGVYYVYKND 322
+KT R+R + P NFG+++P +L + + L Y+V++ +L G YF +YVYK
Sbjct: 608 AKTPRQRNELYNPPIFNFGLQLPQPILILIITLIYSVMSTKILTSGLAYFIIGFYVYKYQ 667
Query: 321 XIYYSGTEIXTGGSYWNFCSNFIVETLMLFQI-LTAIELFVMGFKMTALCMVPLIILT-- 151
I+ + + G W I+ L+LFQ+ +T G + + C+ PL ++T
Sbjct: 668 LIFATDHLPHSTGKVWPLIFRRIIVGLLLFQLTMTGTLAGFEGGWVLSSCLFPLPVVTLC 727
Query: 150 --FYYKQNVLSLFKDSCSFYPLNVLEEQYIDNFSRNIMENRLDY 25
+ +++N L L K + L+ + E DN + N Y
Sbjct: 728 FLYDFEKNYLPLSK----YIALSSIREYERDNSTVNSANEEESY 767
>gi|2950458|emb|CAA17808| (AL022071) hypothetical protein [Schizosaccharomyces pombe]
Length = 865
Score = 59.3 bits (141), Expect = 3e-08
Identities = 38/145 (26%), Positives = 66/145 (45%)
Query: 573 TGNVLFSIKIPIFLKSLIYKIFFGSKTTRERYQTIKPTPINFGIEIPIVLLSIPMALTYA 394
T + I PI L + K F S T R+ + PT + + ++ +A+ YA
Sbjct: 535 TCSFFVEIAQPITLTIRLIKTKFFSPTPRDLLEWTAPTKYVYSQVLNKLIYFFTIAICYA 594
Query: 393 VLTPIMLVVGAIYFFGVYYVYKNDXIYYSGTEIXTGGSYWNFCSNFIVETLMLFQILTAI 214
+ P++L+ ++ F Y K +Y S + +GG YW N I+ L L I+ +
Sbjct: 595 CINPLVLLFASVLFCVNYLTQKYILMYVSNSSTESGGGYWRPVVNRILLGLELANIILFL 654
Query: 213 ELFVMGFKMTALCMVPLIILTFYYK 139
L+V G ++ A C++P +K
Sbjct: 655 CLWVQGGRVRAYCIIPNFSFAIAFK 679
>gi|4263507|gb|AAD15333| (AC004044) hypothetical protein [Arabidopsis thaliana]
Length = 785
Score = 58.9 bits (140), Expect = 4e-08
Identities = 34/136 (25%), Positives = 63/136 (46%)
Query: 498 KTTRERYQTIKPTPINFGIEIPIVLLSIPMALTYAVLTPIMLVVGAIYFFGVYYVYKNDX 319
KT ++R Q + P ++F P + + L YA + PI+L ++F Y V+++
Sbjct: 547 KTEQDRQQAMDPGHLDFATSEPRIQFYFLLGLVYAAVAPILLPFIIVFFAFAYVVFRHQV 606
Query: 318 IYYSGTEIXTGGSYWNFCSNFIVETLMLFQILTAIELFVMGFKMTALCMVPLIILTFYYK 139
I + +G YW ++ L++ Q+L L F ++P ILTF++
Sbjct: 607 INVYDQKYESGARYWPDVHRRLIICLIISQLLMMGLLSTKKFAKVTALLLPQPILTFWFY 666
Query: 138 QNVLSLFKDSCSFYPL 91
+ F+ + S +PL
Sbjct: 667 RYCAGRFESAFSKFPL 682
>gi|3924615 (AF069442) hypothetical protein [Arabidopsis thaliana]
Length = 680
Score = 58.9 bits (140), Expect = 4e-08
Identities = 34/136 (25%), Positives = 63/136 (46%)
Query: 498 KTTRERYQTIKPTPINFGIEIPIVLLSIPMALTYAVLTPIMLVVGAIYFFGVYYVYKNDX 319
KT ++R Q + P ++F P + + L YA + PI+L ++F Y V+++
Sbjct: 442 KTEQDRQQAMDPGHLDFATSEPRIQFYFLLGLVYAAVAPILLPFIIVFFAFAYVVFRHQV 501
Query: 318 IYYSGTEIXTGGSYWNFCSNFIVETLMLFQILTAIELFVMGFKMTALCMVPLIILTFYYK 139
I + +G YW ++ L++ Q+L L F ++P ILTF++
Sbjct: 502 INVYDQKYESGARYWPDVHRRLIICLIISQLLMMGLLSTKKFAKVTALLLPQPILTFWFY 561
Query: 138 QNVLSLFKDSCSFYPL 91
+ F+ + S +PL
Sbjct: 562 RYCAGRFESAFSKFPL 577
>gi|2781347 (AC003113) F24O1.3 [Arabidopsis thaliana]
Length = 760
Score = 58.2 bits (138), Expect = 6e-08
Identities = 46/167 (27%), Positives = 82/167 (48%), Gaps = 4/167 (2%)
Query: 516 KIFFGSKTTRERYQTIKPTPINFGIEIPIVLLSIPMALTYAVLTPIMLVVGAIYFFG-VY 340
K FF KT ++R + + P I+F P + L + L YA +TP++L I+FFG Y
Sbjct: 525 KNFFFVKTEKDREEAMDPGQIDFYATEPRIQLYFLLGLVYAPVTPVLLPF-IIFFFGFAY 583
Query: 339 YVYKNDXIYYSGTEIXTGGSYWNFCSNFIVETLMLFQILTAIELFVMGFKMTALCMVPLI 160
V+++ I + + G++W I+ L++ QIL + G + ++ L
Sbjct: 584 LVFRHQIINVYNQKYESAGAFWPDVHGRIISALIISQILLLGLMSTKGKVQSTPFLLVLA 643
Query: 159 ILTFYYKQNVLSLFKDSCSFYPLNVLEEQYIDNFSRNIMENRLD---YLEN 16
ILTF + + ++ S + +N L+E I + E L+ +L+N
Sbjct: 644 ILTFGFHRFCKGRYE---SAFVINPLQEAMIKDTLERAREPNLNLKGFLQN 691
>gi|3157932 (AC002131) Similar to hypothetical protein HYP1 gb|Z97338 from A.
thaliana. [Arabidopsis thaliana]
Length = 783
Score = 55.4 bits (131), Expect = 4e-07
Identities = 34/136 (25%), Positives = 64/136 (47%)
Query: 498 KTTRERYQTIKPTPINFGIEIPIVLLSIPMALTYAVLTPIMLVVGAIYFFGVYYVYKNDX 319
KT ++R + + P IN+ P + L + L YA +TP++L I+F Y V+++
Sbjct: 561 KTEKDREEAMNPGQINYHATEPRIQLYFLLGLVYAPVTPVLLPFIIIFFALAYLVFRHQI 620
Query: 318 IYYSGTEIXTGGSYWNFCSNFIVETLMLFQILTAIELFVMGFKMTALCMVPLIILTFYYK 139
I E + +W I+ L++ QIL L G + ++ L I+TF++
Sbjct: 621 INVYNQEYESAARFWPDVHGRIISALIIAQILLMGLLSTKGAAQSTPFLLFLPIITFFFH 680
Query: 138 QNVLSLFKDSCSFYPL 91
+ ++ + +PL
Sbjct: 681 RYCKGRYEPAFLRHPL 696
>gi|2961357|emb|CAA18115| (AL022140) putative protein [Arabidopsis thaliana]
Length = 697
Score = 53.5 bits (126), Expect = 2e-06
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 6/175 (3%)
Query: 540 IFLKSLIY---KIFFGSKTTRERYQTIKPTPINFGIEIPIVLLSIPMALTYAVLTPIMLV 370
+ LK LI K F KT ++R + + P I F P + L + L YA +TP++L
Sbjct: 459 LMLKPLIMFHLKNAFLVKTDKDREEAMDPGSIGFNTGEPRIQLYFLLGLVYAPVTPMLLP 518
Query: 369 VGAIYFFGVYYVYKNDXIYYSGTEIXTGGSYWNFCSNFIVETLMLFQILTAIELFVMGFK 190
++F Y VY++ I E + ++W ++ L++ Q+L + ++G K
Sbjct: 519 FILVFFALAYIVYRHQIINVYNQEYESAAAFWPDVHGRVIAALVISQLLL---MGLLGTK 575
Query: 189 MTALC---MVPLIILTFYYKQNVLSLFKDSCSFYPLNVLEEQYIDNFSRNIMENRLDYLE 19
AL ++ L +LT + ++ + YPL + +R N YL+
Sbjct: 576 HAALAAPFLIALPVLTIGFHHFCKGRYEPAFIRYPLQEAMMKDTLETAREPNLNLKGYLQ 635
Query: 18 N 16
N
Sbjct: 636 N 636
>gi|1076334|pir||S51583 hypothetical protein HYP1 - Arabidopsis thaliana
>gi|499168|emb|CAA56145| (X79707) HYP1 [Arabidopsis
thaliana]
Length = 468
Score = 52.7 bits (124), Expect = 3e-06
Identities = 44/171 (25%), Positives = 81/171 (46%), Gaps = 2/171 (1%)
Query: 552 IKIPIFLKSLIYKIFFGSKTTRERYQTIKPTPINFGIEIPIVLLSIPMALTYAVLTPIML 373
+++ L S I K+F G + +E + TP F EIP +L + +TY L+P++L
Sbjct: 277 LRLVPLLWSFITKLF-GKEDDKEF--EVPSTP--FCQEIPRILFFGLLGITYFFLSPLIL 331
Query: 372 VVGAIYFFGVYYVYKNDXIYYSGTEIXTGGSYWNFCSNFIVETLMLFQILTAIELF-VMG 196
+Y+ Y +Y+N + + TGG +W ++ + +L+L I+ A+ LF +
Sbjct: 332 PFLLVYYCLGYIIYRNQVLNVYAAKYETGGKFWPIVHSYTIFSLVLMHII-AVGLFGLKE 390
Query: 195 FKMTALCMVPLIILTFYYKQNVLSLFKDSCSFYPLNVL-EEQYIDNFSRNIME 40
+ + +PL +LT + F + YP L + D +N+ E
Sbjct: 391 LPVASSLTIPLPVLTVLFSIYCQRRFLPNFKSYPTQCLVNKDKADEREQNMSE 443
>gi|498707|emb|CAA55187| (X78422) HYP1 [Arabidopsis thaliana]
Length = 468
Score = 52.7 bits (124), Expect = 3e-06
Identities = 44/171 (25%), Positives = 81/171 (46%), Gaps = 2/171 (1%)
Query: 552 IKIPIFLKSLIYKIFFGSKTTRERYQTIKPTPINFGIEIPIVLLSIPMALTYAVLTPIML 373
+++ L S I K+F G + +E + TP F EIP +L + +TY L+P++L
Sbjct: 277 LRLVPLLWSFITKLF-GKEDDKEF--EVPSTP--FCQEIPRILFFGLLGITYFFLSPLIL 331
Query: 372 VVGAIYFFGVYYVYKNDXIYYSGTEIXTGGSYWNFCSNFIVETLMLFQILTAIELF-VMG 196
+Y+ Y +Y+N + + TGG +W ++ + +L+L I+ A+ LF +
Sbjct: 332 PFLLVYYCLGYIIYRNQLLNVYAAKYETGGKFWPIVHSYTIFSLVLMHII-AVGLFGLKE 390
Query: 195 FKMTALCMVPLIILTFYYKQNVLSLFKDSCSFYPLNVL-EEQYIDNFSRNIME 40
+ + +PL +LT + F + YP L + D +N+ E
Sbjct: 391 LPVASSLTIPLPVLTVLFSIYCQRRFLPNFKSYPTQCLVNKDKADEREQNMSE 443
>gi|2425117 (AF019983) similar to S. cerevisiae probable membrane protein
YLR241w encoded by GenBank Accession Number U20865
[Dictyostelium discoideum]
Length = 550
Score = 47.3 bits (110), Expect = 1e-04
Identities = 33/127 (25%), Positives = 60/127 (46%), Gaps = 1/127 (0%)
Query: 522 IYKIFFGSKTTRERYQTIKPTPINFGIEIPIVLLSIPMALTYAVLTPIMLVVGAIYFFGV 343
+ K+ + +KT R+ T+ P +G+ LL + + L Y+ L+P +L+ GA YF
Sbjct: 359 LIKLKWLAKTKRQIDDTLHQGPFAYGVNYAKNLLILQLTLAYSTLSPFILIFGAWYFGLS 418
Query: 342 YYVYKNDXIYYSGTEIXTGGSYWNFCSNFIVETLMLFQILTAIELFVMGFKMTALCMVPL 163
Y V K + I+ + GG + L+++ IL V F L ++ L
Sbjct: 419 YLVQKYNIIWVNTPNYQCGGFMSPMHFRRTIIGLLIYHILMIGTFNVYKFYYGILVVICL 478
Query: 162 II-LTFYY 142
++ + F+Y
Sbjct: 479 VVTIVFWY 486
>gi|1175480|sp|Q09809|YAB9_SCHPO HYPOTHETICAL 90.9 KD PROTEIN C2G11.09 IN CHROMOSOME I
>gi|2130395|pir||S62464 hypothetical protein SPAC2G11.09
- fission yeast (Schizosaccharomyces pombe)
>gi|1019407|emb|CAA91174| (Z54354) conserved hypothetical
protein-major facilitator superfamily
[Schizosaccharomyces pombe]
Length = 796
Score = 45.3 bits (105), Expect = 5e-04
Identities = 28/125 (22%), Positives = 56/125 (44%)
Query: 465 PTPINFGIEIPIVLLSIPMALTYAVLTPIMLVVGAIYFFGVYYVYKNDXIYYSGTEIXTG 286
P + GI +P + + + L Y++++P++LV G IYF + VYK + IY +
Sbjct: 626 PDSFSVGIFLPQPMFIMLICLCYSIISPLILVFGLIYFIIGFLVYKYELIYQMEHPQHST 685
Query: 285 GSYWNFCSNFIVETLMLFQILTAIELFVMGFKMTALCMVPLIILTFYYKQNVLSLFKDSC 106
G W+ ++ ++ Q+ + + + + PL+ T N ++ + S
Sbjct: 686 GELWSTIFLRMIFGCVIMQLTMMGLMSLRKAYWLSTVIFPLLCFTVISAYNFSTMIRSSM 745
Query: 105 SFYPL 91
F L
Sbjct: 746 QFVSL 750
>gi|1175441|sp|Q09766|YA7D_SCHPO HYPOTHETICAL 98.4 KD PROTEIN C24H6.13 IN CHROMOSOME I
>gi|2130369|pir||S62415 hypothetical protein SPAC24H6.13
- fission yeast (Schizosaccharomyces pombe)
>gi|984709|emb|CAA90857| (Z54142) putative major
facilitator superfamily protein [Schizosaccharomyces
pombe]
Length = 871
Score = 39.1 bits (89), Expect = 0.035
Identities = 34/158 (21%), Positives = 67/158 (41%), Gaps = 5/158 (3%)
Query: 570 GNVLFSIKIPIFLKSLIYKIFFGSKTTRERYQTIKPTPI-NFGIEIPIVLLSIPMALTYA 394
G L I + + L ++ +IF T R+++ ++G P+ L + + + Y+
Sbjct: 529 GGALLQI-VTLLLSKVLGRIF--DNTPRKKWNRWNQLSAPSWGTVYPVYSLLVTIMICYS 585
Query: 393 VLTPIMLVVGAIYFFGVYYVYKNDXIYYSGTEIXTGGSYWNFCSNFIVETLMLFQILTAI 214
++ PI++ A+ F +Y+ Y + IY G G + LFQ+
Sbjct: 586 IIAPIIIGFAAVAFVLIYFAYSYNLIYVLGHNADAKGRNY---------PRALFQVF--- 633
Query: 213 ELFVMGFKMTALCMVPLIILTFYYKQNVLSL----FKDSCSFY 97
+G + +C++ L +L + VL F +C Y
Sbjct: 634 ----VGLYLAEVCLIGLFVLAKNWGATVLEAVFLGFTVACHLY 672
>gi|465929|sp|P34472|YMH5_CAEEL HYPOTHETICAL 136.3 KD PROTEIN F58A4.5 IN CHROMOSOME III
>gi|482184|pir||S40977 hypothetical protein F58A4.5 -
Caenorhabditis elegans >gi|3877821|emb|CAA80162| (Z22179)
similar to Reverse transcriptase; cDNA EST EMBL:D32769
comes from this gene; cDNA EST EMBL:D35507 comes from
this gene; cDNA EST EMBL:D32847 comes from this gene;
cDNA EST EMBL:D33937 comes from this gene; cDNA EST
EMB...
Length = 1222
Score = 33.6 bits (75), Expect = 1.5
Identities = 23/80 (28%), Positives = 42/80 (51%), Gaps = 11/80 (13%)
Query: 649 LMESISTGMVESSVLFITVL------IQKNIYRKC-----SIFH*NPNILKISHL*NIFW 503
+ + G V +LFI + ++ NI+ C IFH NP+ L+ S + W
Sbjct: 808 ISSGVPQGSVSGPLLFILFINDLLIDLEPNIHADDIKIFHHNPSTLQNSIDTIVKW 867
Query: 502 KQNNKRTVSDNKTNSYQFWN*NSHSTFKYSN 410
+ NK ++ K++ + NS+ T++ N
Sbjct: 868 SKKNKLPLAPAKSSVLSLGSRNSNHTYRVDN 898
>gi|4493932|emb|CAB38968| (AL034556) predicted using hexExon; MAL3P5.2 (PFC0580c),
Hypothetical protein, len: 1097 aa [Plasmodium
falciparum]
Length = 1096
Score = 33.2 bits (74), Expect = 2.0
Identities = 16/48 (33%), Positives = 25/48 (51%), Gaps = 1/48 (2%)
Query: 514 NIFWKQNNKRTVSDNKT-NSYQFWN*NSHSTFKYSNGSHLCRTNTDHAC 371
N++ K+ NK T ++N N+ + N H +N H+C N DH C
Sbjct: 576 NVYDKETNKTTTNNNNNDNNDNICSNNDHICS--NNNDHICSNNNDHIC 622
>gi|2497148|sp|Q03153|YMY8_YEAST HYPOTHETICAL 70.4 KD PROTEIN IN SNZ1-YPK2 INTERGENIC REGION
>gi|1078515|pir||S55084 probable membrane protein
YMR098c - yeast (Saccharomyces cerevisiae)
>gi|854435|emb|CAA89899| (Z49807) unknown [Saccharomyces
cerevisiae]
Length = 612
Score = 32.5 bits (72), Expect = 3.5
Identities = 16/45 (35%), Positives = 28/45 (61%), Gaps = 3/45 (6%)
Query: 609 YCLLPY*SKKIFTGNVLFSI---KIPIFLKSLIYKIFFGSKTTRERYQ 475
+CLLP+ K+I N+ F+I K P FL S I +++ +K + ++
Sbjct: 4 FCLLPFHGKRIGVANIPFTILFKKGPYFLHSHITAVYYSTKGKNDSHE 51
>gi|1707226 (U80843) C32B5.9 gene product [Caenorhabditis elegans]
Length = 470
Score = 32.1 bits (71), Expect = 4.5
Identities = 24/93 (25%), Positives = 43/93 (45%), Gaps = 11/93 (11%)
Query: 600 LPY*SKKIFTGNVLFSI-----------KIPIFLKSLIYKIFFGSKTTRERYQTIKPTPI 454
+ Y KK F G V+ + +IP LK ++ + S + ++ IKP +
Sbjct: 1 MKYLLKKFFGGRVIVKVDKLTIFCRIVLRIPASLKFQVHNLQLFSSDNNQLFEAIKPI-L 59
Query: 453 NFGIEIPIVLLSIPMALTYAVLTPIMLVVGAIYFFGVYYVYKND 322
+F + + L + Y PI+ +YF G + + ND
Sbjct: 60 DFSTPLSSITLYFGYKINYE--DPIIRSTETLYFDGYFLLLDND 101
>gi|2244900|emb|CAB10322| (Z97338) similarity to hypothetical protein HYP1 - Arabidopsis
[Arabidopsis thaliana]
Length = 680
Score = 32.1 bits (71), Expect = 4.5
Identities = 31/148 (20%), Positives = 61/148 (40%), Gaps = 3/148 (2%)
Query: 534 LKSLIY---KIFFGSKTTRERYQTIKPTPINFGIEIPIVLLSIPMALTYAVLTPIMLVVG 364
LK LI K F +T ++R + P I F + +PI+L
Sbjct: 470 LKPLIIYHLKNSFLVRTEKDREEATDPGTIGFNTAV----------------SPILLPFI 513
Query: 363 AIYFFGVYYVYKNDXIYYSGTEIXTGGSYWNFCSNFIVETLMLFQILTAIELFVMGFKMT 184
++F + VY++ I + + G +W +V L++ Q+L L +
Sbjct: 514 LVFFGLAFVVYRHQVINVYNQKYESAGKFWPDVHRRVVTALVVSQLLLMGLLSTKHASKS 573
Query: 183 ALCMVPLIILTFYYKQNVLSLFKDSCSFYPL 91
++ L +LT + ++ + ++ + YPL
Sbjct: 574 TPLLLVLPLLTIGFHKHCKNRYQPAFVTYPL 604
>gi|2119581|pir||I55651 noradrenaline transporter - bovine >gi|483928 (U09198)
noradrenaline transporter [Bos taurus]
Length = 602
Score = 32.1 bits (71), Expect = 4.5
Identities = 20/73 (27%), Positives = 33/73 (44%)
Query: 432 IVLLSIPMALTYAVLTPIMLVVGAIYFFGVYYVYKNDXIYYSGTEIXTGGSYWNFCSNFI 253
+ LL A T + +M +G +F+GV + ND G + G YW C F+
Sbjct: 467 LTLLDTFAAGTSILFAVLMEAIGVSWFYGVDR-FSNDIQQMMGFK---PGLYWRLCWKFV 522
Query: 252 VETLMLFQILTAI 214
+LF ++ +I
Sbjct: 523 SPAFLLFVVIVSI 535
>gi|1709356|sp|P51143|NTNO_BOVIN SODIUM-DEPENDENT NORADRENALINE TRANSPORTER (NOREPINEPHRINE
TRANSPORTER) (NET) >gi|631555|pir||S43285 noradrenaline
transport protein - bovine >gi|1050439|emb|CAA55645|
(X79015) norepinephrine transporter [Bos taurus]
Length = 615
Score = 32.1 bits (71), Expect = 4.5
Identities = 20/73 (27%), Positives = 33/73 (44%)
Query: 432 IVLLSIPMALTYAVLTPIMLVVGAIYFFGVYYVYKNDXIYYSGTEIXTGGSYWNFCSNFI 253
+ LL A T + +M +G +F+GV + ND G + G YW C F+
Sbjct: 467 LTLLDTFAAGTSILFAVLMEAIGVSWFYGVDR-FSNDIQQMMGFK---PGLYWRLCWKFV 522
Query: 252 VETLMLFQILTAI 214
+LF ++ +I
Sbjct: 523 SPAFLLFVVIVSI 535
>gi|128612|sp|P27922|NTDO_BOVIN SODIUM-DEPENDENT DOPAMINE TRANSPORTER (DA TRANSPORTER) (DAT)
>gi|108658|pir||A41617 dopamine transport protein -
bovine
Length = 693
Score = 32.1 bits (71), Expect = 4.5
Identities = 23/83 (27%), Positives = 38/83 (45%)
Query: 453 NFGIEIPIVLLSIPMALTYAVLTPIMLVVGAIYFFGVYYVYKNDXIYYSGTEIXTGGSYW 274
N GI + LL A T + +M V+G +F+GV+ + +D +G YW
Sbjct: 463 NGGIYV-FTLLDHFAAGTSILFGVLMEVIGVAWFYGVWQ-FSDDIKQMTGRRPSL---YW 517
Query: 273 NFCSNFIVETLMLFQILTAIELF 205
C F+ +LF ++ +I F
Sbjct: 518 RLCWKFVSPCFLLFVVVVSIATF 540
>gi|2342870 (U72877) L-epinephrine transporter [Rana catesbeiana]
Length = 630
Score = 31.7 bits (70), Expect = 5.9
Identities = 23/80 (28%), Positives = 37/80 (45%)
Query: 453 NFGIEIPIVLLSIPMALTYAVLTPIMLVVGAIYFFGVYYVYKNDXIYYSGTEIXTGGSYW 274
N GI + + LL A T + ++ VG +F+GV + +D G G YW
Sbjct: 476 NGGIYV-VTLLDTFAAGTSILFAVLIEAVGVSWFYGVDR-FSDDIYRMLGFR---PGLYW 530
Query: 273 NFCSNFIVETLMLFQILTAI 214
C F+ +LF ++T+I
Sbjct: 531 RLCWKFVSPAFLLFVVITSI 550
>gi|2598034|emb|CAA73665| (Y13223) norepinephrine transporter [Rattus norvegicus]
Length = 617
Score = 31.7 bits (70), Expect = 5.9
Identities = 20/73 (27%), Positives = 33/73 (44%)
Query: 432 IVLLSIPMALTYAVLTPIMLVVGAIYFFGVYYVYKNDXIYYSGTEIXTGGSYWNFCSNFI 253
+ LL A T + +M +G +F+GV + ND G + G YW C F+
Sbjct: 469 LTLLDTFAAGTSILFAVLMEAIGVSWFYGVDR-FSNDIQQMMGFK---PGLYWRLCWKFV 524
Query: 252 VETLMLFQILTAI 214
+LF ++ +I
Sbjct: 525 SPAFLLFVVVVSI 537
>gi|3914158|sp|O55192|NTNO_MOUSE SODIUM-DEPENDENT NORADRENALINE TRANSPORTER (NOREPINEPHRINE
TRANSPORTER) (NET) >gi|2737923 (U76306) norepinephrine
transporter [Mus musculus]
Length = 617
Score = 31.7 bits (70), Expect = 5.9
Identities = 20/73 (27%), Positives = 33/73 (44%)
Query: 432 IVLLSIPMALTYAVLTPIMLVVGAIYFFGVYYVYKNDXIYYSGTEIXTGGSYWNFCSNFI 253
+ LL A T + +M +G +F+GV + ND G + G YW C F+
Sbjct: 469 LTLLDTFAAGTSILFAVLMEAIGVSWFYGVDR-FSNDIQQMMGFK---PGLYWRLCWKFV 524
Query: 252 VETLMLFQILTAI 214
+LF ++ +I
Sbjct: 525 SPAFLLFVVVVSI 537
>gi|3786487 (AF098992) F53C3.9 gene product [Caenorhabditis elegans]
Length = 485
Score = 31.7 bits (70), Expect = 5.9
Identities = 21/80 (26%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 649 LMESISTGMVESSVLFITVL------IQKNIYRKC-----SIFH*NPNILKISHL*NIFW 503
+ + G V +LFI + ++ NI+ C IFH NP+ ++ S + W
Sbjct: 192 ISSGVPQGSVSGPLLFILFINDLLIDLEPNIHADDIKIFHHNPSTIQNSIDTIVKW 251
Query: 502 KQNNKRTVSDNKTNSYQFWN*NSHSTFKYSN 410
+ NK ++ K++ + N++ T++ N
Sbjct: 252 SKKNKLPLAPAKSSVLSLGSRNTNHTYRVDN 282
>gi|128616|sp|P23975|NTNO_HUMAN SODIUM-DEPENDENT NORADRENALINE TRANSPORTER (NOREPINEPHRINE
TRANSPORTER) (NET) >gi|107214|pir||S14278 noradrenaline
transport protein - human >gi|189258 (M65105)
noradrenaline transporter [Homo sapiens]
>gi|1143479|emb|CAA62566| (X91117) norepinephrine
transporter [Homo sapiens] >gi|227608|prf||1707305A
noradrenaline transporter [Homo sapiens]
>gi|4557046|ref|NP_001034.1|pSLC6A2| solute carrier
family 6 (neurotransmitter transporter, noradrenalin),
member 2
Length = 617
Score = 31.3 bits (69), Expect = 7.8
Identities = 20/73 (27%), Positives = 32/73 (43%)
Query: 432 IVLLSIPMALTYAVLTPIMLVVGAIYFFGVYYVYKNDXIYYSGTEIXTGGSYWNFCSNFI 253
+ LL A T + +M +G +F+GV + ND G G YW C F+
Sbjct: 469 LTLLDTFAAGTSILFAVLMEAIGVSWFYGVDR-FSNDIQQMMGFR---PGLYWRLCWKFV 524
Query: 252 VETLMLFQILTAI 214
+LF ++ +I
Sbjct: 525 SPAFLLFVVVVSI 537
>gi|4049672 (AF063866) ORF MSV077 hypothetical protein [Melanoplus sanguinipes
entomopoxvirus]
Length = 598
Score = 31.3 bits (69), Expect = 7.8
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 71 YCSSKTFRG*NEQLSLNNDNTFCL**NVNIINGTIHNAVILKPITNNSIAVRI*NNINVS 250
YC S T+ N+ L ++N +N+ IH +TN I+ I NIN+S
Sbjct: 449 YCDSITYVDINDTLMYISNN------QINVSTQKIHTYGHETLLTNKKISPIILKNINIS 502
Query: 251 TIKFEQ 268
+ FEQ
Sbjct: 503 DLYFEQ 508
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Apr 12, 1999 12:54 PM
Number of letters in database: 112,640,273
Number of sequences in database: 368,476
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143291166
Number of Sequences: 368476
Number of extensions: 3063523
Number of successful extensions: 6364
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 6346
Number of HSP's gapped (non-prelim): 31
length of query: 251
length of database: 112640273
effective HSP length: 53
effective length of query: 197
effective length of database: 93111045
effective search space: 18342875865
effective search space used: 18342875865
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 68 (30.9 bits)