BLASTX 2.0.8 [Jan-05-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 11VII16R
(818 letters)
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
368,476 sequences; 112,640,273 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|1171601|emb|CAA64585| (X95276) rps8 [Plasmodium falciparum] 39 0.030
gi|4493975|emb|CAB39034| (AL034559) predicted using hexExon; MAL... 34 1.3
gi|729683|sp|P40336|HB58_MOUSE H58 PROTEIN >gi|345669|pir|... 34 1.7
gi|3342000 (AF054179) H beta 58 homolog [Homo sapiens] 34 1.7
gi|2924254|emb|CAA71676| (Y10669) lef-8 [Spodoptera littoralis n... 33 2.2
gi|2983795 (AE000737) NADH dehydrogenase I chain M [Aquifex aeol... 33 2.9
gi|1197645 (U46859) Wzx [Yersinia enterocolitica (type 0:8)] 33 2.9
gi|2622840 (AE000928) carbon monoxide dehydrogenase, alpha subun... 33 2.9
gi|1311691|bbs|175310 (S80809) progenitor toxin L nontoxic-nonhe... 32 3.8
gi|1708427|sp|P52576|IFR_PEA ISOFLAVONE REDUCTASE (IFR) (NADPH:I... 32 3.8
gi|629171|pir||S44271 toxin B - Clostridium difficile 32 3.8
gi|761714|emb|CAA80815| (Z23277) toxin B [Clostridium difficile] 32 3.8
gi|418185|sp|P32227|VC05_SPVKA HYPOTHETICAL PROTEIN C5 >gi|34748... 32 5.0
gi|2498298|sp|Q12387|DEC1_YEAST DEC1 PROTEIN (MDM20 PROTEIN) >gi... 32 6.5
gi|2688735 (AE001178) B. burgdorferi predicted coding region BB0... 32 6.5
gi|3649755|emb|CAB11104| (Z98547) predicted using hexExon; MAL3P... 31 8.6
gi|2128918|pir||D64490 hypothetical protein MJ1525 - Methanococc... 31 8.6
gi|1168712|sp|P46081|BXCN_CLOBO BOTULINUM NEUROTOXIN TYPE C1, NO... 31 8.6
gi|1075950|pir||S49106 BoNT associated protein 138K - Clostridiu... 31 8.6
gi|4579737|dbj|BAA75083| (AB012112) NTNH [Clostridium botulinum ... 31 8.6
gi|1708426|sp|P52575|IFR_MEDSA ISOFLAVONE REDUCTASE (IFR) (NADPH... 31 8.6
gi|2429426 (AF025457) No definition line found [Caenorhabditis e... 31 8.6
>gi|1171601|emb|CAA64585| (X95276) rps8 [Plasmodium falciparum]
Length = 128
Score = 39.5 bits (90), Expect = 0.030
Identities = 31/102 (30%), Positives = 51/102 (49%), Gaps = 4/102 (3%)
Query: 511 VKYIFIVSYCFEVNRVI*DVVILFDLYKASIYVFIESIIFSAVIYGFKYKFHNSIISLYV 690
+K++ V Y F++ + F LYK + ++ SI+ +Y +KY F I+++Y
Sbjct: 3 IKFLNNVKYNFKLKKN-------FILYKYNKVIYYLSIL----LYNYKYIFKLYILNIYN 51
Query: 691 KYLSPGSFDIICAIFFISHRYKSLNVLYI----NQLPYWAYNVL*C 816
KY IF I + YK++N + NQL Y +N L C
Sbjct: 52 KYF----------IFIILNEYKNINYFKVYIKYNQLFYMNFNKLLC 87
>gi|4493975|emb|CAB39034| (AL034559) predicted using hexExon; MAL3P7.17 (PFC0940c),
Hypothetical protein, len: 807 aa [Plasmodium falciparum]
Length = 806
Score = 34.0 bits (76), Expect = 1.3
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Query: 683 NEIIELWNLYLKPYITAENIIDSIKTYIDALYKSNNITTSY----------ITRFTSKQY 534
N+I N+YL P+ +I SI YI YK+ N+ + I F K
Sbjct: 625 NKIKYYLNIYLIPFFHKIHI--SIINYISVYYKNENLQYYFFHSNSTKKKKIQLFIHKTK 682
Query: 533 DTIKIYLTAVFKFIKDKNNPHQIEN-ICTSISQETLFCYDAQYEILQHIYISLKTGSGFD 357
+ +K +F K+KNN H I+N + + L Y ++IYI+ + +
Sbjct: 683 NNLKNTYNNIF--CKEKNNKHNIQNKYNATYLNKDLSNNFYPYNEKEYIYINKNKTNPHN 740
Query: 356 ITYFIKEMIYKIKYDILLHIIASNTDAQN 270
Y+ Y + Y+ + + S+ QN
Sbjct: 741 HYYY---TFYDLIYEPPFYYLKSHKTVQN 766
>gi|729683|sp|P40336|HB58_MOUSE H58 PROTEIN >gi|345669|pir||B44882 H beta 58 homolog -
chicken >gi|346725|pir||A44882 essential for
embryogenesis protein H beta 58 - mouse
>gi|252484|bbs|109890 H beta 58 homolog [chickens,
Peptide, 327 aa] >gi|252483|bbs|109840 (S41204) H beta
58=essential for embryogenesis [mice, embryo, Peptide
Mutant, 327 aa] [Mus sp.]
Length = 327
Score = 33.6 bits (75), Expect = 1.7
Identities = 35/149 (23%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 539 QYDTIKIYLTAVFKFIKDKNNPHQIENICTSISQETLF----CYDAQYEILQHIYISLKT 372
++ I+I + DK+N H+ N+ ++ YD ++ ++ Y S
Sbjct: 64 EHQGIRIEFVGQIELFNDKSNTHEFVNLVKELALPGELTQSRSYDFEFMQVEKPYESY-I 122
Query: 371 GSGFDITYFIKEMIYK------IKYDILLHIIASNTDAQNVHSLGYWRNELSEEIGFIKN 210
G+ + YF+K I + +YD+++H +A+ D N + + I F N
Sbjct: 123 GANVRLRYFLKVTIVRRLTDLVKEYDLIVHQLATYPDVNNSIKMEVGIEDCL-HIEFEYN 181
Query: 209 ESKYSHVRTGTLIDNKPYILYQFFILFKAEKVATEILEK 93
+SKY H++ +I K Y L + K + + ++++K
Sbjct: 182 KSKY-HLK--DVIVGKIYFL---LVRIKIQHMELQLIKK 214
>gi|3342000 (AF054179) H beta 58 homolog [Homo sapiens]
Length = 327
Score = 33.6 bits (75), Expect = 1.7
Identities = 35/149 (23%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 539 QYDTIKIYLTAVFKFIKDKNNPHQIENICTSISQETLF----CYDAQYEILQHIYISLKT 372
++ I+I + DK+N H+ N+ ++ YD ++ ++ Y S
Sbjct: 64 EHQGIRIEFVGQIELFNDKSNTHEFVNLVKELALPGELTQSRSYDFEFMQVEKPYESY-I 122
Query: 371 GSGFDITYFIKEMIYK------IKYDILLHIIASNTDAQNVHSLGYWRNELSEEIGFIKN 210
G+ + YF+K I + +YD+++H +A+ D N + + I F N
Sbjct: 123 GANVRLRYFLKVTIVRRLTDLVKEYDLIVHQLATYPDVNNSIKMEVGIEDCL-HIEFEYN 181
Query: 209 ESKYSHVRTGTLIDNKPYILYQFFILFKAEKVATEILEK 93
+SKY H++ +I K Y L + K + + ++++K
Sbjct: 182 KSKY-HLK--DVIVGKIYFL---LVRIKIQHMELQLIKK 214
>gi|2924254|emb|CAA71676| (Y10669) lef-8 [Spodoptera littoralis nuclear polyhedrosis virus]
Length = 909
Score = 33.2 bits (74), Expect = 2.2
Identities = 16/70 (22%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 695 YLTYNEIIELWNLYLKPYITAENIIDSIKTYI--DALYKSNNITTSYITRFTSKQYDTIK 522
Y + +++ ++Y K Y+ +EN+ ++++TY+ ++ N + T K +D IK
Sbjct: 167 YDDHEDVLFARDVYAKDYVVSENLNETLETYLRSSGKWEPLNFLFDFDKNQTDKMFDRIK 226
Query: 521 IYLTAVFKFIKD 486
+ + A + D
Sbjct: 227 MIMRAEINYSID 238
>gi|2983795 (AE000737) NADH dehydrogenase I chain M [Aquifex aeolicus]
Length = 501
Score = 32.8 bits (73), Expect = 2.9
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 577 LFDLYKASIYVFIESIIF---SAVIYGFKYKFHNSIISLYVKYLS---PGSFDI-ICAIF 735
L+ YK +Y+FI S+ A I + YK + S Y++ L+ P F+I + +F
Sbjct: 165 LYSAYKFFVYIFISSLFLLLGIASISTYHYKMNGSFTFEYLELLNLNIPNGFEIFLFLLF 224
Query: 736 FISHRYKSLNVLYINQLP 789
FI+ K+ V + LP
Sbjct: 225 FIAFAVKTPIVPFHTWLP 242
>gi|1197645 (U46859) Wzx [Yersinia enterocolitica (type 0:8)]
Length = 429
Score = 32.8 bits (73), Expect = 2.9
Identities = 24/87 (27%), Positives = 49/87 (55%), Gaps = 6/87 (6%)
Query: 526 IVSYCFEVNRVI*DVVILFDLYKASIYVFIESIIFSAVIYGFKYKFHN------SIISLY 687
++SY F + I + + +L SI + IE +++S+++Y K ++ SI S+Y
Sbjct: 158 LISYIFCAHVKIFMIYLHVELINFSIIIVIEVLLYSSILYFLMNKNYSEIKVSLSINSVY 217
Query: 688 VKYLSPGSFDIICAIFFISHRYKSLNVLYINQL 786
+K S+ ++ + F + KS N+L+I +
Sbjct: 218 LKSALKESWPLMLSAFSVVIFMKS-NILFIQHM 249
>gi|2622840 (AE000928) carbon monoxide dehydrogenase, alpha subunit
[Methanobacterium thermoautotrophicum]
Length = 780
Score = 32.8 bits (73), Expect = 2.9
Identities = 24/93 (25%), Positives = 42/93 (44%), Gaps = 8/93 (8%)
Query: 758 DLYRWDIKKI--AQIISNEPGDKYLTY------NEIIELWNLYLKPYITAENIIDSIKTY 603
D +W +K + ++I EP ++L Y + + L ++P T + + Y
Sbjct: 665 DEEKWKLKDLRTGEVIDGEPAPEHLLYAAENREEATVMIAKLCIRPTDTPKGRQMKLSNY 724
Query: 602 IDALYKSNNITTSYITRFTSKQYDTIKIYLTAVFKFIKDKN 480
ID K I RF + D +Y V K +++KN
Sbjct: 725 IDLHRKYLGTIPDDIDRFIRTEKDIPIVYKRDVMKILEEKN 765
>gi|1311691|bbs|175310 (S80809) progenitor toxin L nontoxic-nonhemagglutinin
component(progenitor toxin M nontoxic-nonhemagglutinin
component) [Clostridium botulinum, type D, CB-16,
Peptide, 1196 aa] [Clostridium botulinum]
Length = 1196
Score = 32.5 bits (72), Expect = 3.8
Identities = 62/226 (27%), Positives = 106/226 (46%), Gaps = 23/226 (10%)
Query: 695 YLTYNEIIELW------NLYLKPYITAENIIDSIKTYIDALYKSNNITTSYITRFTSKQY 534
++ Y E IEL +LYLK E I S K + + L +NN T + RFT K
Sbjct: 859 FIQYTESIELVYGVNGESLYLKS--PNETIKFSNKFFTNGL--TNNFTICFWLRFTGKND 914
Query: 533 DTIKIYLTAVFKF---IKDKNNPHQIENICTSISQETLFCYDAQYEILQHIYISLKTGSG 363
D ++ V I ++N E I ++ +QE+++ + + +I IS+
Sbjct: 915 DKTRLIGNKVNNCGWEIYFEDNGLVFEIIDSNGNQESVYLSNIINDNWYYISISVDRLKD 974
Query: 362 FDITYFIKEMIYKIKYDILLHIIASN-------TDAQNVHSLGYWRNEL-SEEIGFIKNE 207
+ + + + + D +L I ++N ++ V L N + SEE+ I+N
Sbjct: 975 QLLIFINDKNVANVSIDQILSIYSTNIISLVNKNNSIYVEELSVLDNPITSEEV--IRNY 1032
Query: 206 SKY---SHVRTGT---LIDNKPYILYQFFILFKAEKVATEILEKINNNGNFLCLASQFIV 45
Y S++R + L NK Y LY + T + E +NN ++L L + +
Sbjct: 1033 FSYLDNSYIRDSSKSLLEYNKNYQLYNYVF------PETSLYEVNDNNKSYLSLKNTDGI 1086
Query: 44 EHEPKKSKL 18
K KL
Sbjct: 1087 NISSVKFKL 1095
>gi|1708427|sp|P52576|IFR_PEA ISOFLAVONE REDUCTASE (IFR) (NADPH:ISOFLAVONE OXIDOREDUCTASE)
>gi|1084375|pir||S48631 isoflavone reductase - garden
pea >gi|619253|bbs|152861 (S72472) isoflavone reductase,
IFR [Pisum sativum=peas, seedlings, Alaska Green,
Peptide, 318 aa] [Pisum sativum]
Length = 318
Score = 32.5 bits (72), Expect = 3.8
Identities = 19/43 (44%), Positives = 28/43 (64%), Gaps = 11/43 (25%)
Query: 701 DKYLTYNEIIELWNLYL-----KPYITAENIIDSIKT------YIDALYKSNNI 573
+ YLT NE+I LW + K Y++ E ++ I+T Y+ ALY S I
Sbjct: 229 NNYLTANEVIALWEKKIGKTLEKTYVSEEQVLKDIQTSSFPHNYLLALYHSQQI 282
>gi|629171|pir||S44271 toxin B - Clostridium difficile
Length = 2367
Score = 32.5 bits (72), Expect = 3.8
Identities = 55/183 (30%), Positives = 78/183 (42%), Gaps = 23/183 (12%)
Query: 620 DSIKTYID-------ALYKSNNITTSYITRFTSKQYDTIKIYLTAVFK-FIKDKNNPHQI 465
DS+KT +D A+ K YI +TSK +DT+ + + F+ + K++ +I
Sbjct: 305 DSVKTAVDWEEMQLEAIMKHKE----YIPEYTSKHFDTLDEEVQSSFESVLASKSDKSEI 360
Query: 464 ENICTSISQETL--FCYDAQYEILQHIYISLKTGSGFDITYFIKEMIYKIKYDILLHIIA 291
I L A+ I+ IS K D+ + YKI D L II+
Sbjct: 361 FLPLGDIEVSPLEVKIAFAKGSIINQALISAKDSYCSDLLIKQIQNRYKILNDTLGPIIS 420
Query: 290 SNTDAQNV-----HSLGYWRNELSEEIGFIKNESKYSHV-----RTGTLIDNKPYI---L 150
D SLG NE E I FI Y V T+ + P I
Sbjct: 421 QGNDFNTTMNNFGESLGAIANE--ENISFIAKIGSYLRVGFYPEANTTITLSGPTIYAGA 478
Query: 149 YQFFILFKAEKVATEILEKINNNGNF 72
Y+ + FK + T IL N F
Sbjct: 479 YKDLLTFKEMSIDTSILSSELRNFEF 504
>gi|761714|emb|CAA80815| (Z23277) toxin B [Clostridium difficile]
Length = 2367
Score = 32.5 bits (72), Expect = 3.8
Identities = 55/183 (30%), Positives = 78/183 (42%), Gaps = 23/183 (12%)
Query: 620 DSIKTYID-------ALYKSNNITTSYITRFTSKQYDTIKIYLTAVFK-FIKDKNNPHQI 465
DS+KT +D A+ K YI +TSK +DT+ + + F+ + K++ +I
Sbjct: 305 DSVKTAVDWEEMQLEAIMKHKE----YIPEYTSKHFDTLDEEVQSSFESVLASKSDKSEI 360
Query: 464 ENICTSISQETL--FCYDAQYEILQHIYISLKTGSGFDITYFIKEMIYKIKYDILLHIIA 291
I L A+ I+ IS K D+ + YKI D L II+
Sbjct: 361 FLPLGDIEVSPLEVKIAFAKGSIINQALISAKDSYCSDLLIKQIQNRYKILNDTLGPIIS 420
Query: 290 SNTDAQNV-----HSLGYWRNELSEEIGFIKNESKYSHV-----RTGTLIDNKPYI---L 150
D SLG NE E I FI Y V T+ + P I
Sbjct: 421 QGNDFNTTMNNFGESLGAIANE--ENISFIAKIGSYLRVGFYPEANTTITLSGPTIYAGA 478
Query: 149 YQFFILFKAEKVATEILEKINNNGNF 72
Y+ + FK + T IL N F
Sbjct: 479 YKDLLTFKEMSIDTSILSSELRNFEF 504
>gi|418185|sp|P32227|VC05_SPVKA HYPOTHETICAL PROTEIN C5 >gi|347481 (L22013) ORF C5L [Swinepox
virus]
Length = 236
Score = 32.1 bits (71), Expect = 5.0
Identities = 33/117 (28%), Positives = 55/117 (46%), Gaps = 12/117 (10%)
Query: 590 YKSNNITTSYITRFTSKQYDTIKIYLTAVFK----FIKDKNNPHQIENICTSISQETLFC 423
Y+S I YI + +Y + AVF+ F +D NP + E + I +E FC
Sbjct: 14 YRSGRIIRKYIRKLNKDEYK----HFCAVFRLNVDFSQDDKNPSRKE-VIRIIDEEFNFC 68
Query: 422 -----YDAQYEILQHIYISLKTGSGFDITYFIKEMIY---KIKYDILLHIIASNTDAQNV 267
YD + H+ ++ S ++ Y +K+ Y KI Y IL I ++ +
Sbjct: 69 DLRLFYDIMTVVPNHMNVASIIYSEYE--YLLKKSNYKNKKINYTILDKINKYHSIDDII 126
Query: 266 HSLGYWRNE 240
+WR +
Sbjct: 127 FMYLHWRKK 135
>gi|2498298|sp|Q12387|DEC1_YEAST DEC1 PROTEIN (MDM20 PROTEIN) >gi|2132841|pir||S66769 probable
membrane protein YOL076w - yeast (Saccharomyces
cerevisiae) >gi|1033068 (U36382) Dec1p [Saccharomyces
cerevisiae] >gi|1322287 (U54799) Saccharomyces
cerevisiae Mdm20p (MDM20) gene, complete cds.
[Saccharomyces cerevisiae] >gi|1419907|emb|CAA99086|
(Z74818) ORF YOL076w [Saccharomyces cerevisiae]
Length = 796
Score = 31.7 bits (70), Expect = 6.5
Identities = 34/137 (24%), Positives = 65/137 (46%), Gaps = 10/137 (7%)
Query: 659 LYLKPYITAENIIDSIKTYIDALYKSNNITTSYITRFTSKQYDT-IKIYL-TAVFKFIKD 486
L LKP+ + II +D L+ + + I T +DT + +YL + K K
Sbjct: 184 LDLKPFQNVQEIIVYCLV-LDELFPQSREISEEIVAITFANFDTSVNLYLKNFILKHTKL 242
Query: 485 KNNPHQIENICTSISQETLFCYDAQYEILQHIYISLKTGSGFDITYFIKE--------MI 330
N+P ++ +C+ + ++ L Y+ ++ Y K S ++ +I E +
Sbjct: 243 LNSPQKLFEVCSKLIEKGLDDYELITNLIDAAYKLSK--SKDEVKQWIDENLGDSRNTRL 300
Query: 329 YKIKYDILLHIIASNTDAQNVHSLGYW 249
++K DI+ TD+ + SL Y+
Sbjct: 301 ARLKLDIMY------TDSVSESSLSYY 321
>gi|2688735 (AE001178) B. burgdorferi predicted coding region BB0796 [Borrelia
burgdorferi]
Length = 185
Score = 31.7 bits (70), Expect = 6.5
Identities = 43/161 (26%), Positives = 70/161 (42%), Gaps = 11/161 (6%)
Query: 563 YITRFTSKQYDTIKIYLTAVFKFIKDKNNPHQIENI--CTSISQETLFCYDAQYEILQHI 390
++ F D IKI + + + + NP N+ + QE + + + + L+H+
Sbjct: 18 FLLSFNVFSIDVIKIGIVDFDRIVIEVLNPQLKANLDQIKNRYQEQINTLNLELKNLKHM 77
Query: 389 YISLKTGSGFDITYFIKEMIYKIKYDILLHI--IASNTDAQ----NVHSLGYWRNELSEE 228
Y + D Y +K D L + +A N Q N++SL N SE
Sbjct: 78 YDKSIADNDLDNARSFGNQ-YNLKVDELKRVSSLAKNNLEQQRLANINSL----NNNSES 132
Query: 227 IGFIKNESKY-SHVRTGTLI--DNKPYILYQFFILFKAEKVATEILEKINNN 81
+ I +Y + + +LI N PYILY + V +LEK N N
Sbjct: 133 LSKILRGIQYVAEINGFSLIMKKNNPYILYHNSTVDITNDVVKHLLEKDNKN 184
>gi|3649755|emb|CAB11104| (Z98547) predicted using hexExon; MAL3P3.3 (PFC0335c), Hypothetical
protein, len: 3725 aa [Plasmodium falciparum]
Length = 3724
Score = 31.3 bits (69), Expect = 8.6
Identities = 54/226 (23%), Positives = 95/226 (41%), Gaps = 23/226 (10%)
Query: 680 EIIELWNLYLKPYITAENIIDSIKT---YIDALYKSNNITTSYITRFTSKQYDTI----- 525
E + L+N YL + T E I + +K Y+ L + + +I ++ + + +
Sbjct: 3135 EFLILYNRYLFYFRTLEQINEFVKNPTFYLKQLKPNPSFVLPFIFVYSCIEIENLHNELH 3194
Query: 524 ---------KIYLTAVFKFIKDKNNPHQIENICTSISQETLFCYDAQYEILQHIYISLKT 372
+ +L + IK Q NI +I E L QY+IL H I
Sbjct: 3195 KSTKCVVINREHLLSFGNKIKKYEKYIQTNNIDDNILMEILHVRLNQYDILSHGCILYNI 3254
Query: 371 GSGFDITYFIKEMIYKIKYDILLHIIASNTDAQ--NVHSLGYWRNELSEEIGFIKNESKY 198
+ YF+ K KY L I N D + N + + ++ +K +
Sbjct: 3255 PYNKNQLYFLLHNAKKKKYVPHLIFIIKNHDNKKTNYEIINNYNDKCITNDMNVKQNVNH 3314
Query: 197 SHVRTGTLIDNKPYILYQFFILFKAEKVATEILEKINNNGNFLCLASQFI----VEHEPK 30
+++ + DN +++ + K + +L K N + C QFI E + K
Sbjct: 3315 NNINSPNDKDN-IHMINDEYKKKKYINTSFTLLSKKKNKEDSYCNLLQFISIIEQEFQEK 3373
Query: 29 KSKLEKYME 3
K K Y+E
Sbjct: 3374 KYKNIIYIE 3382
>gi|2128918|pir||D64490 hypothetical protein MJ1525 - Methanococcus jannaschii >gi|1592155
(U67593) putative transmembrane oligosaccharyl
transferase [Methanococcus jannaschii]
Length = 933
Score = 31.3 bits (69), Expect = 8.6
Identities = 21/72 (29%), Positives = 36/72 (49%), Gaps = 9/72 (12%)
Query: 284 TDAQNVHSL-GYWR--------NELSEEIGFIKNESKYSHVRTGTLIDNKPYILYQFFIL 132
TD V S+ G+W N+ E+ F K + Y + GT++ N Y + L
Sbjct: 757 TDIAPVWSMFGFWNFSLPPNTPNDKREKGAFFKGTAYY--LGNGTILANVNVYTYSYVTL 814
Query: 131 FKAEKVATEILEKINNNGNFL 69
+ ++T I++KIN +
Sbjct: 815 INSTNISTAIVQKINGQAKII 835
>gi|1168712|sp|P46081|BXCN_CLOBO BOTULINUM NEUROTOXIN TYPE C1, NONTOXIC COMPONENT
>gi|76794|pir||JQ1467 toxin, nontoxic component -
Clostridium botulinum phage (type C)
>gi|40389|emb|CAA44262| (X62389) non-toxic components
[Clostridium botulinum]
Length = 1196
Score = 31.3 bits (69), Expect = 8.6
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 23/225 (10%)
Query: 692 LTYNEIIELW------NLYLKPYITAENIIDSIKTYIDALYKSNNITTSYITRFTSKQYD 531
+ Y E IEL +LYLK E I S K + + L +NN T + RFT K D
Sbjct: 860 IQYTESIELVYGVNGESLYLKS--PNETIKFSNKFFTNGL--TNNFTICFWLRFTGKNDD 915
Query: 530 TIKIYLTAVFKF---IKDKNNPHQIENICTSISQETLFCYDAQYEILQHIYISLKTGSGF 360
++ V I ++N E I ++ +QE+++ + + +I IS+
Sbjct: 916 KTRLIGNKVNNCGWEIYFEDNGLVFEIIDSNGNQESVYLSNIINDNWYYISISVDRLKDQ 975
Query: 359 DITYFIKEMIYKIKYDILLHIIASN-------TDAQNVHSLGYWRNEL-SEEIGFIKNES 204
+ + + + + D +L I ++N ++ V L N + SEE+ I+N
Sbjct: 976 LLIFINDKNVANVSIDQILSIYSTNIISLVNKNNSIYVEELSVLDNPITSEEV--IRNYF 1033
Query: 203 KY---SHVRTGT---LIDNKPYILYQFFILFKAEKVATEILEKINNNGNFLCLASQFIVE 42
Y S++R + L NK Y LY + T + E +NN ++L L + +
Sbjct: 1034 SYLDNSYIRDSSKSLLEYNKNYQLYNYVF------PETSLYEVNDNNKSYLSLKNTDGIN 1087
Query: 41 HEPKKSKL 18
K KL
Sbjct: 1088 ISSVKFKL 1095
>gi|1075950|pir||S49106 BoNT associated protein 138K - Clostridium botulinum
>gi|1085641|pir||S46430 ANTP-139 protein - phage 1C
>gi|516174|emb|CAA51312| (X72793) ANTP-139 [Clostridium
botulinum phage 1C] >gi|4376225|emb|CAA47059| (X66433)
138kDa protein associated with BoNT /C1-haemagglutinin
complex [Clostridium botulinum]
Length = 1196
Score = 31.3 bits (69), Expect = 8.6
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 23/225 (10%)
Query: 692 LTYNEIIELW------NLYLKPYITAENIIDSIKTYIDALYKSNNITTSYITRFTSKQYD 531
+ Y E IEL +LYLK E I S K + + L +NN T + RFT K D
Sbjct: 860 IQYTESIELVYGVNGESLYLKS--PNETIKFSNKFFTNGL--TNNFTICFWLRFTGKNDD 915
Query: 530 TIKIYLTAVFKF---IKDKNNPHQIENICTSISQETLFCYDAQYEILQHIYISLKTGSGF 360
++ V I ++N E I ++ +QE+++ + + +I IS+
Sbjct: 916 KTRLIGNKVNNCGWEIYFEDNGLVFEIIDSNGNQESVYLSNIINDNWYYISISVDRLKDQ 975
Query: 359 DITYFIKEMIYKIKYDILLHIIASN-------TDAQNVHSLGYWRNEL-SEEIGFIKNES 204
+ + + + + D +L I ++N ++ V L N + SEE+ I+N
Sbjct: 976 LLIFINDKNVANVSIDQILSIYSTNIISLVNKNNSIYVEELSVLDNPITSEEV--IRNYF 1033
Query: 203 KY---SHVRTGT---LIDNKPYILYQFFILFKAEKVATEILEKINNNGNFLCLASQFIVE 42
Y S++R + L NK Y LY + T + E +NN ++L L + +
Sbjct: 1034 SYLDNSYIRDSSKSLLEYNKNYQLYNYVF------PETSLYEVNDNNKSYLSLKNTDGIN 1087
Query: 41 HEPKKSKL 18
K KL
Sbjct: 1088 ISSVKFKL 1095
>gi|4579737|dbj|BAA75083| (AB012112) NTNH [Clostridium botulinum D phage]
Length = 1196
Score = 31.3 bits (69), Expect = 8.6
Identities = 62/225 (27%), Positives = 105/225 (46%), Gaps = 23/225 (10%)
Query: 692 LTYNEIIELW------NLYLKPYITAENIIDSIKTYIDALYKSNNITTSYITRFTSKQYD 531
+ Y E IEL +LYLK E I S K + + L +NN T + RFT K D
Sbjct: 860 IQYTESIELVYGVNGESLYLKS--PNETIKFSNKFFTNGL--TNNFTICFWLRFTGKNDD 915
Query: 530 TIKIYLTAVFKF---IKDKNNPHQIENICTSISQETLFCYDAQYEILQHIYISLKTGSGF 360
++ V I ++N E I ++ +QE+++ + + +I IS+
Sbjct: 916 KTRLIGNKVNNCGWEIYFEDNGLVFEIIDSNGNQESVYLSNIINDNWYYISISVDRLKDQ 975
Query: 359 DITYFIKEMIYKIKYDILLHIIASN-------TDAQNVHSLGYWRNEL-SEEIGFIKNES 204
+ + + + + D +L I ++N ++ V L N + SEE+ I+N
Sbjct: 976 LLIFINDKNVANVSIDQILSIYSTNIISLVNKNNSIYVEELSVLDNPITSEEV--IRNYF 1033
Query: 203 KY---SHVRTGT---LIDNKPYILYQFFILFKAEKVATEILEKINNNGNFLCLASQFIVE 42
Y S++R + L NK Y LY + T + E +NN ++L L + +
Sbjct: 1034 SYLDNSYIRDSSKSLLEYNKNYQLYNYVF------PETSLYEVNDNNKSYLSLKNTDGIN 1087
Query: 41 HEPKKSKL 18
K KL
Sbjct: 1088 ISSVKFKL 1095
>gi|1708426|sp|P52575|IFR_MEDSA ISOFLAVONE REDUCTASE (IFR) (NADPH:ISOFLAVONE OXIDOREDUCTASE)
>gi|608533 (U17436) isoflavone reductase [Medicago
sativa]
Length = 318
Score = 31.3 bits (69), Expect = 8.6
Identities = 18/43 (41%), Positives = 27/43 (61%), Gaps = 11/43 (25%)
Query: 701 DKYLTYNEIIELWNLYL-----KPYITAENIIDSIK------TYIDALYKSNNI 573
+ YLT NE+I LW + K Y++ E ++ I+ Y+ ALY S I
Sbjct: 229 ENYLTQNEVIALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQQI 282
>gi|2429426 (AF025457) No definition line found [Caenorhabditis elegans]
Length = 385
Score = 31.3 bits (69), Expect = 8.6
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 309 NIIFYFINHF--FDEISNIKTTSSF*RNIYMLEYFILSIITKKCFL*NRCTYIFYLVRIV 482
N+I +NH D I+ +K + +F R + ++ ++ + + F CT I Y +R
Sbjct: 80 NVINEVLNHLDLIDLIALMKVSRNFRRAVQNMKVCVIESLVVQLFEETDCTKIIYNLRYK 139
Query: 483 FIFYEFKHCCQVYFY 527
F + + C+V F+
Sbjct: 140 FEYRQNDAGCEVTFF 154
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Apr 12, 1999 12:54 PM
Number of letters in database: 112,640,273
Number of sequences in database: 368,476
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156089587
Number of Sequences: 368476
Number of extensions: 3264990
Number of successful extensions: 8749
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 8746
Number of HSP's gapped (non-prelim): 37
length of query: 272
length of database: 112640273
effective HSP length: 54
effective length of query: 218
effective length of database: 92742569
effective search space: 20217880042
effective search space used: 20217880042
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 69 (31.3 bits)