BLASTX 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 11VII-2F
         (706 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           368,476 sequences; 112,640,273 total letters

Searching...................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|3293522 (AF069195) NADH dehydrogenase 1 [Praon dorsale]             33  2.4
gi|3649772|emb|CAB11121| (Z98547) predicted using hexExon; MAL3P...    32  5.4
gi|4049751 (AF063866) ORF MSV228 leucine rich repeat gene family...    32  5.4
gi|3080535|emb|CAA18663| (AL022600) RNA helicase [Schizosaccharo...    31  7.1
gi|3845129 (AE001381) hypothetical protein [Plasmodium falciparum]     31  9.4
gi|3845142 (AE001384) hypothetical protein [Plasmodium falciparum]     31  9.4


>gi|3293522 (AF069195) NADH dehydrogenase 1 [Praon dorsale]
           Length = 155
           
 Score = 32.8 bits (73), Expect = 2.4
 Identities = 17/53 (32%), Positives = 30/53 (56%)

Query: 189 LFIISFLTGCAYSSLRPLAPKARLNSY*LVSLQICINLIYLMLQSVKILRLVY 31
           L I  + + C+YS L  +   A+  SY  V+  IC+ +I +M+ S+ +  L+Y
Sbjct: 70  LMIAGWSSNCSYSMLGSMRSVAQSISY-EVTFSICMLIILMMINSINLSNLIY 121



>gi|3649772|emb|CAB11121| (Z98547) predicted using hexExon; MAL3P3.18 (PFC0425w), Hypothetical
            protein, len: 4551 aa [Plasmodium falciparum]
            Length = 4550
            
 Score = 31.7 bits (70), Expect = 5.4
 Identities = 24/87 (27%), Positives = 47/87 (53%), Gaps = 4/87 (4%)

Query: 466  NITYSNYSVMYSSDIYEYLLNKXXSNILLTLHLENEKLVDQENFCLHKFYNRANIIPGNH 287
            NI+++N +++    + EYLLNK          + +  + +  N  L+K YN+ N    N+
Sbjct: 3197 NISHNNNNILILL-MNEYLLNKDND-------INDYNIKEYLNEILNK-YNKFNFYENNY 3247

Query: 286  NEIKEHYYLLHKTIPN----NIQQILKNYFF 206
            + IK   ++ HK +P+    ++  + K +FF
Sbjct: 3248 DIIKYSTFVDHKIVPSVSSFSVFDLYKLFFF 3278



>gi|4049751 (AF063866) ORF MSV228 leucine rich repeat gene family protein,
           similar to Amsacta moorei entomopoxvirus Q3 ORF
           SW:P28854 [Melanoplus sanguinipes entomopoxvirus]
           Length = 279
           
 Score = 31.7 bits (70), Expect = 5.4
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 9/86 (10%)

Query: 481 KIYXXNITYSNYSVMYSSDIYEY-LLNKXXSNILL---TLHLENEKLVDQENFCLHKFYN 314
           K+   NIT+ N S++Y+S++     +N   ++++L   T+ LE       +  CL    N
Sbjct: 113 KVLKTNITFINKSILYNSNLLSIKFINCDTTSLILPQSTISLEFNNTFTYDYTCLESLIN 172

Query: 313 RANII-----PGNHNEIKEHYYLLHKTIPNNIQQI 224
              +I      GN N +K         I NNI+++
Sbjct: 173 LKELILKKCYIGNLNTVK---------ISNNIEKL 198



>gi|3080535|emb|CAA18663| (AL022600) RNA helicase [Schizosaccharomyces pombe]
            Length = 1935
            
 Score = 31.3 bits (69), Expect = 7.1
 Identities = 20/63 (31%), Positives = 31/63 (48%)

Query: 394  SNILLTLHLENEKLVDQENFCLHKFYNRANIIPGNHNEIKEHYYLLHKTIPNNIQQILKN 215
            S +++T   E EK     + C+++  N     P     I  +YYL H TI N +Q+I +N
Sbjct: 1592 SKLVVTAFNELEK-----SACIYRV-NEETYAPTTLGRIVSYYYLFHTTIRNFVQKITEN 1645

Query: 214  YFF 206
              F
Sbjct: 1646 AEF 1648



>gi|3845129 (AE001381) hypothetical protein [Plasmodium falciparum]
           Length = 646
           
 Score = 30.9 bits (68), Expect = 9.4
 Identities = 25/72 (34%), Positives = 33/72 (45%)

Query: 466 NITYSNYSVMYSSDIYEYLLNKXXSNILLTLHLENEKLVDQENFCLHKFYNRANIIPGNH 287
           NI Y     +   D  E +L+K   NIL     EN    ++EN  LHK    ANII   +
Sbjct: 404 NILYKEEENILHKDEEENILHKEEENILHKDEEENILYKEEENI-LHK--EEANIIETKN 460

Query: 286 NEIKEHYYLLHK 251
            E+K+    L K
Sbjct: 461 AEVKKKKNTLRK 472



>gi|3845142 (AE001384) hypothetical protein [Plasmodium falciparum]
            Length = 2539
            
 Score = 30.9 bits (68), Expect = 9.4
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 20/87 (22%)

Query: 475  YXXNITYSNYSVMYSSDIYEYLLNKXXSNILL------------TLHLENEKLVDQENFC 332
            Y  N  Y   +VMY  DIY Y L     NILL             L+ E+E  V+ +N  
Sbjct: 1015 YKGNNIYKIKTVMYQKDIYNYYL----LNILLLVGVKIYIRQHNKLNKESEYNVNSQNLI 1070

Query: 331  --------LHKFYNRANIIPGNHNEIKEHYYLLHKTIPNNIQQILKN 215
                    ++  +   + I  N  +I   +Y + K I N  ++I+ N
Sbjct: 1071 GSKSKSSKIYMVHFITSEISFNKKKILRPFYKIQKKINNKYKRIIMN 1117


  Database: Non-redundant GenBank CDS
  translations+PDB+SwissProt+SPupdate+PIR
    Posted date:  Apr 12, 1999 12:54 PM
  Number of letters in database: 112,640,273
  Number of sequences in database:  368,476
  
Lambda     K      H
   0.318    0.135     0.00 

Gapped
Lambda     K      H
   0.270   0.0470 4.94e-324 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104845212
Number of Sequences: 368476
Number of extensions: 1588058
Number of successful extensions: 3349
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 3348
Number of HSP's gapped (non-prelim): 7
length of query: 235
length of database: 112640273
effective HSP length: 53
effective length of query: 181
effective length of database: 93111045
effective search space: 16853099145
effective search space used: 16853099145
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 68 (30.9 bits)