BLASTX 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 11VII-26F
         (487 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           368,476 sequences; 112,640,273 total letters

Searching...................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|1352911|sp|P47147|YJ80_YEAST HYPOTHETICAL 80.2 KD PROTEIN IN ...    32  3.3


>gi|1352911|sp|P47147|YJ80_YEAST HYPOTHETICAL 80.2 KD PROTEIN IN CPA2-NNF1 INTERGENIC REGION
           >gi|1084628|pir||S57131 hypothetical protein YJR110w -
           yeast (Saccharomyces cerevisiae)
           >gi|1015824|emb|CAA89640| (Z49610) ORF YJR110w
           [Saccharomyces cerevisiae]
           Length = 688
           
 Score = 31.7 bits (70), Expect = 3.3
 Identities = 16/49 (32%), Positives = 28/49 (56%)

Query: 66  KTGIITLNKNFFIVSDLFNNNFSYNKSNTKFLRYFYSQLSYFFCIYKIL 212
           +T +I L++    +S  FN NF  NK + KF+   + Q  +  C+Y++L
Sbjct: 492 ETNLINLSR----ISKKFNENFKLNKKSLKFVSPVFQQ--FLDCVYQLL 534


  Database: Non-redundant GenBank CDS
  translations+PDB+SwissProt+SPupdate+PIR
    Posted date:  Apr 12, 1999 12:54 PM
  Number of letters in database: 112,640,273
  Number of sequences in database:  368,476
  
Lambda     K      H
   0.318    0.135     0.00 

Gapped
Lambda     K      H
   0.270   0.0470 4.94e-324 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74869975
Number of Sequences: 368476
Number of extensions: 1289088
Number of successful extensions: 2586
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2585
Number of HSP's gapped (non-prelim): 2
length of query: 162
length of database: 112640273
effective HSP length: 52
effective length of query: 109
effective length of database: 93479521
effective search space: 10189267789
effective search space used: 10189267789
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 66 (30.1 bits)