BLASTX 2.0.8 [Jan-05-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 11VII-1R
(795 letters)
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
368,476 sequences; 112,640,273 total letters
Searching...................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4239895|dbj|BAA74737| (AB016816) MASL1 [Homo sapiens] 41 0.010
gi|2459628 (U88880) Toll-like receptor 4 [Homo sapiens] >gi|4507... 41 0.010
gi|2429103 (U93091) Toll protein homolog [Homo sapiens] 41 0.010
gi|4049771 (AF063866) ORF MSV255 leucine rich repeat gene family... 38 0.064
gi|480379|pir||S36779 ribosome-binding protein p34 - rat >gi|534... 38 0.11
gi|117793|sp|P23466|CYAA_SACKL ADENYLATE CYCLASE (ATP PYROPHOSPH... 36 0.25
gi|4049759 (AF063866) ORF MSV240 leucine rich repeat gene family... 36 0.42
gi|3875045|emb|CAA99797| (Z75530) C47E8.2 [Caenorhabditis elegan... 36 0.42
gi|1657758 (U66707) densin-180 [Rattus norvegicus] 35 0.55
gi|1169151|sp|P08678|CYAA_YEAST ADENYLATE CYCLASE (ATP PYROPHOSP... 35 0.55
gi|854568|emb|CAA60917| (X87611) adenylate cyclase [Saccharomyce... 35 0.55
gi|171360 (M12057) adenylate cyclase [Saccharomyces cerevisiae] 35 0.55
gi|4092774 (AF105140) disease resistance gene homolog 9N [Brassi... 35 0.55
gi|3877646|emb|CAB05742| (Z83230) similar to Leucine Rich Repeat... 35 0.73
gi|3168891 (AF068716) contains similarity to repeated leucine-ri... 34 0.95
gi|2498866|sp|Q15404|RSU1_HUMAN RAS SUPPRESSOR PROTEIN 1 (RSU-1)... 34 0.95
gi|1708880|sp|P51886|LUM_RAT LUMICAN PRECURSOR (LUM) (KERATAN SU... 34 1.2
gi|3132526 (AF051151) Toll/interleukin-1 receptor-like protein 3... 34 1.2
gi|4049760 (AF063866) ORF MSV241 leucine rich repeat gene family... 34 1.6
gi|3335351 (AC004512) Similar to ERECTA receptor protein kinase ... 34 1.6
gi|4512674|gb|AAD21728| (AC006931) hypothetical protein [Arabido... 34 1.6
gi|3056600 (AC004255) T1F9.21 [Arabidopsis thaliana] 33 2.1
gi|3845236 (AE001407) T-complex protein 1 (HSP60 fold superfamil... 33 2.1
gi|1361985|pir||A57072 disease resistance protein RPM1 - Arabido... 33 2.8
gi|3649753|emb|CAB11102| (Z98547) predicted using hexExon; MAL3P... 33 2.8
gi|1504040|dbj|BAA13219| (D86983) similar to D.melanogaster pero... 33 2.8
gi|3252977 (AF068919) Ras-binding protein SUR-8 [Caenorhabditis ... 33 2.8
gi|1401355 (U61957) contains similarity to leucine-rich repeats ... 33 2.8
gi|4092771 (AF105139) disease resistance gene homolog 1A [Brassi... 32 3.7
gi|1350783|sp|P47735|RLK5_ARATH RECEPTOR-LIKE PROTEIN KINASE 5 P... 32 4.8
gi|548879|sp|Q01730|RSU1_MOUSE RAS SUPPRESSOR PROTEIN 1 (RSU-1) ... 32 4.8
gi|2558656 (AC002354) No definition line found [Arabidopsis thal... 32 4.8
gi|3461839 (AC005315) putative receptor protein kinase [Arabidop... 32 4.8
gi|2213599 (AC000348) T7N9.19 [Arabidopsis thaliana] 32 4.8
gi|4455310|emb|CAB36845| (AL035528) putative disease resistance ... 32 4.8
gi|3894389 (AF053996) Hcr2-2A [Lycopersicon pimpinellifolium] 32 6.3
gi|4493979|emb|CAB39038| (AL034559) predicted using hexExon; MAL... 32 6.3
gi|3287742|sp|Q58692|BIOB_METJA BIOTIN SYNTHASE (BIOTIN SYNTHETA... 32 6.3
gi|2792220 (AF032688) NBS-LRR type resistance protein [Oryza sat... 32 6.3
gi|4049911 (AF063866) ORF MSV227 leucine rich repeat gene family... 32 6.3
gi|3649772|emb|CAB11121| (Z98547) predicted using hexExon; MAL3P... 31 8.2
gi|1653514|dbj|BAA18427| (D90914) hypothetical protein [Synechoc... 31 8.2
gi|3894385 (AF053994) Hcr2-0A [Lycopersicon esculentum] 31 8.2
gi|4049897 (AF063866) ORF MSV010 leucine rich repeat gene family... 31 8.2
gi|1469876|dbj|BAA09768| (D63481) The KIAA0147 gene product is r... 31 8.2
gi|2781362 (AC003113) F24O1.18 [Arabidopsis thaliana] 31 8.2
gi|1345878|sp|P49606|CYAA_USTMA ADENYLATE CYCLASE (ATP PYROPHOSP... 31 8.2
>gi|4239895|dbj|BAA74737| (AB016816) MASL1 [Homo sapiens]
Length = 1052
Score = 41.0 bits (94), Expect = 0.010
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 156 GIETGYNKLPKIFCEISNLKHLTLMNLNLYKLPSRFENLKDLKILNLVKNEF 1
G E G LP FCE+++L+ L L N L LP++F L+ LK+LNL N F
Sbjct: 236 GAELG--TLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLF 285
>gi|2459628 (U88880) Toll-like receptor 4 [Homo sapiens]
>gi|4507533|ref|NP_003257.1|pTLR4| toll-like receptor4
Length = 799
Score = 41.0 bits (94), Expect = 0.010
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 408 TIQYSQLLMNXLLVIFLRLITCTNYKITSDDYDSLHDLIIYSDDVYL-NELYNEISNNST 232
+++Y L N ++ + + + + +L + +S + L N +Y +IS+ T
Sbjct: 360 SLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 419
Query: 231 FLCSFTLYKFLENYKKIKVTNLINEGIETGYNKLPKIFCEISNLKHLTLMNLNLYKL-PS 55
+ ++ L + + +K+ G N LP IF E+ NL L L L +L P+
Sbjct: 420 RVAFNGIFNGLSSLEVLKMA-----GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 474
Query: 54 RFENLKDLKILNLVKNEF 1
F +L L++LN+ N F
Sbjct: 475 AFNSLSSLQVLNMSHNNF 492
>gi|2429103 (U93091) Toll protein homolog [Homo sapiens]
Length = 839
Score = 41.0 bits (94), Expect = 0.010
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 408 TIQYSQLLMNXLLVIFLRLITCTNYKITSDDYDSLHDLIIYSDDVYL-NELYNEISNNST 232
+++Y L N ++ + + + + +L + +S + L N +Y +IS+ T
Sbjct: 400 SLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 459
Query: 231 FLCSFTLYKFLENYKKIKVTNLINEGIETGYNKLPKIFCEISNLKHLTLMNLNLYKL-PS 55
+ ++ L + + +K+ G N LP IF E+ NL L L L +L P+
Sbjct: 460 RVAFNGIFNGLSSLEVLKMA-----GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 514
Query: 54 RFENLKDLKILNLVKNEF 1
F +L L++LN+ N F
Sbjct: 515 AFNSLSSLQVLNMSHNNF 532
>gi|4049771 (AF063866) ORF MSV255 leucine rich repeat gene family protein,
similar to Amsacta moorei entomopoxvirus Q3 ORF
SW:P28854 [Melanoplus sanguinipes entomopoxvirus]
Length = 403
Score = 38.3 bits (87), Expect = 0.064
Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 13/119 (10%)
Query: 363 FLRLITCTNYKITSDDYDSLH---DLIIYSDD----VYLNELYNEISNNSTFLCSFTLYK 205
+++ + CTN I + + L +++I SD+ + L +L N+I C+ +K
Sbjct: 20 YIKFLDCTNRNIKNFKFLELLTNLEILIISDNPDSNISLCKLPNKIKRFECNYCNIKDFK 79
Query: 204 FLENYKKIKVTNLINEGIETGY------NKLPKIFCEISNLKHLTLMNLNLYKLPSRFEN 43
FLE + +++ + I+E + NKL KI C N+K + E
Sbjct: 80 FLEPLENLEILD-ISENYNSNISLCKLSNKLKKIICNYCNIKDFKFL-----------EP 127
Query: 42 LKDLKILNLVKN 7
L++L+IL++ +N
Sbjct: 128 LENLEILDISEN 139
>gi|480379|pir||S36779 ribosome-binding protein p34 - rat >gi|534876|dbj|BAA02786|
(D13623) p34 protein [Rattus sp.]
Length = 307
Score = 37.5 bits (85), Expect = 0.11
Identities = 20/43 (46%), Positives = 26/43 (59%)
Query: 135 KLPKIFCEISNLKHLTLMNLNLYKLPSRFENLKDLKILNLVKN 7
+LP F + NL+HL L+N L LP F LK+LK L+L N
Sbjct: 76 QLPADFGRLVNLQHLDLLNNRLVTLPVSFAQLKNLKWLDLKDN 118
>gi|117793|sp|P23466|CYAA_SACKL ADENYLATE CYCLASE (ATP PYROPHOSPHATE-LYASE) (ADENYLYL CYCLASE)
>gi|68375|pir||OYBYK adenylate cyclase (EC 4.6.1.1) -
yeast (Saccharomyces kluyveri) >gi|233345|bbs|47635
adenylyl cyclase, CYR [Saccharomyces kluyveri, Peptide,
1839 aa] >gi|4857|emb|CAA39513| (X56042) adenylyl
cyclase [Saccharomyces kluyveri]
Length = 1839
Score = 36.4 bits (82), Expect = 0.25
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 19/99 (19%)
Query: 297 LIIYSDDVYLNELYNEISNNSTFLCSFTLYKFLENYKKIKVTNLIN-------------- 160
+I+Y + L ++SNN+ F F+E+ K+ ++N
Sbjct: 626 IILYQHTSDIESL--DVSNNANI---FLPLDFIESAIKLSSLRMVNIRASKFPANVTDAY 680
Query: 159 --EGIETGYNKLPKIFCEISNLKHLTLMNL---NLYKLPSRFENLKDLKILNLVKNEF 1
++ N + K+ I L +LT++NL NL +LP F LK+L++L++ N+F
Sbjct: 681 KLVSLDLERNFIKKVPDSIFKLNNLTIVNLQCNNLERLPPGFSKLKNLQLLDISSNKF 738
>gi|4049759 (AF063866) ORF MSV240 leucine rich repeat gene family protein,
similar to Amsacta moorei entomopoxvirus Q3 ORF
SW:P28854 [Melanoplus sanguinipes entomopoxvirus]
Length = 527
Score = 35.6 bits (80), Expect = 0.42
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 16/104 (15%)
Query: 318 DYDSLHDLIIYSDDVYLNEL--YNEISNNSTFLCSFTLYKFLENYKKIKVTNLINEGIET 145
D+ S LI Y D +N+L E N + L T+YK+++ Y +++TNL
Sbjct: 7 DFYSYKTLIEYLDINNINKLSIIEECRNYNLELNIITIYKYIDFYNPLEITNL------- 59
Query: 144 GYNKLPKIFCE----ISNLKHLTLM---NLNLYKLPSRFE-------NLKDLKILNLVKN 7
+K I C + NL+ L + NLN LP + N+KD K L + N
Sbjct: 60 DCHKCNIIDCNFLKPLENLEELNISENNNLNKLLLPKSIKKLNCNNCNIKDFKFLEPLDN 119
>gi|3875045|emb|CAA99797| (Z75530) C47E8.2 [Caenorhabditis elegans] >gi|3875244|emb|CAA99813|
(Z75532) C47E8.2 [Caenorhabditis elegans]
Length = 411
Score = 35.6 bits (80), Expect = 0.42
Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 339 NYKITSDDYDS----LHDLIIYSDDVYLNELYNEISNNSTFLCSFTLYKFLENYKKIKVT 172
NY D Y+ L+ L I+S YL E+ + S N+ F+ F KFLE K
Sbjct: 321 NYNYRKDVYEKTQTQLNILFIFSVFKYLIEIKSAFSKNTGFI--FFFEKFLEELFSRKKN 378
Query: 171 NLINEGIETGYNKLPKIFCEISNLKHLTLMNLN 73
E+ N+ IFC N++H N N
Sbjct: 379 -------ESNKNQKCSIFCFFENIRHSIWKNFN 404
>gi|1657758 (U66707) densin-180 [Rattus norvegicus]
Length = 1495
Score = 35.2 bits (79), Expect = 0.55
Identities = 24/67 (35%), Positives = 34/67 (49%)
Query: 207 KFLENYKKIKVTNLINEGIETGYNKLPKIFCEISNLKHLTLMNLNLYKLPSRFENLKDLK 28
+F EN K K +I + +KLP F ++ NL L L + L LP+ F L L+
Sbjct: 111 EFPENIKCCKCLTIIEASVNP-ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLR 169
Query: 27 ILNLVKN 7
IL L +N
Sbjct: 170 ILELREN 176
Score = 33.2 bits (74), Expect = 2.1
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 276 VYLNELYNE-ISNNSTFLCSFTLYKFLENYKKIKVTNLIN----EGIETGYNK---LPKI 121
+YLN+ + E + N L + + EN+ K ++ E ++ G N+ LP++
Sbjct: 148 LYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEV 207
Query: 120 FCEISNLKHLTLMNLNLYKLPSRFENLKDLKILNLVKN 7
+I NL+ L + N L LP LK L L++ KN
Sbjct: 208 LDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKN 245
>gi|1169151|sp|P08678|CYAA_YEAST ADENYLATE CYCLASE (ATP PYROPHOSPHATE-LYASE) (ADENYLYL CYCLASE)
>gi|1070522|pir||OYBY adenylate cyclase (EC 4.6.1.1) -
yeast (Saccharomyces cerevisiae)
>gi|1006714|emb|CAA89295| (Z49280) ORF YJL005w
[Saccharomyces cerevisiae]
Length = 2026
Score = 35.2 bits (79), Expect = 0.55
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 19/84 (22%)
Query: 252 EISNNSTFLCSFTLYKFLENYKKIKVTNLIN----------------EGIETGYNKLPKI 121
++SNN+ F +F+E+ K+ ++N +E N + K+
Sbjct: 822 DVSNNANI---FLPLEFIESSIKLLSLRMVNIRASKFPSNITKAYKLVSLELQRNFIRKV 878
Query: 120 FCEISNLKHLTLMNLN---LYKLPSRFENLKDLKILNLVKNEF 1
I L +LT++NL L LP+ F LK+L++L+L N+F
Sbjct: 879 PNSIMKLSNLTILNLQCNELESLPAGFVELKNLQLLDLSSNKF 921
>gi|854568|emb|CAA60917| (X87611) adenylate cyclase [Saccharomyces cerevisiae]
Length = 1354
Score = 35.2 bits (79), Expect = 0.55
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 19/84 (22%)
Query: 252 EISNNSTFLCSFTLYKFLENYKKIKVTNLIN----------------EGIETGYNKLPKI 121
++SNN+ F +F+E+ K+ ++N +E N + K+
Sbjct: 150 DVSNNANI---FLPLEFIESSIKLLSLRMVNIRASKFPSNITKAYKLVSLELQRNFIRKV 206
Query: 120 FCEISNLKHLTLMNLN---LYKLPSRFENLKDLKILNLVKNEF 1
I L +LT++NL L LP+ F LK+L++L+L N+F
Sbjct: 207 PNSIMKLSNLTILNLQCNELESLPAGFVELKNLQLLDLSSNKF 249
>gi|171360 (M12057) adenylate cyclase [Saccharomyces cerevisiae]
Length = 2026
Score = 35.2 bits (79), Expect = 0.55
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 19/84 (22%)
Query: 252 EISNNSTFLCSFTLYKFLENYKKIKVTNLIN----------------EGIETGYNKLPKI 121
++SNN+ F +F+E+ K+ ++N +E N + K+
Sbjct: 822 DVSNNANI---FLPLEFIESSIKLLSLRMVNIRASKFPSNITKAYKLVSLELQRNFIRKV 878
Query: 120 FCEISNLKHLTLMNLN---LYKLPSRFENLKDLKILNLVKNEF 1
I L +LT++NL L LP+ F LK+L++L+L N+F
Sbjct: 879 PNSIMKLSNLTILNLQCNELESLPAGFVELKNLQLLDLSSNKF 921
>gi|4092774 (AF105140) disease resistance gene homolog 9N [Brassica napus]
Length = 926
Score = 35.2 bits (79), Expect = 0.55
Identities = 17/43 (39%), Positives = 26/43 (59%)
Query: 147 TGYNKLPKIFCEISNLKHLTLMNLNLYKLPSRFENLKDLKILN 19
+G +KLP+I + NLK+L L + +LP F L +L+ LN
Sbjct: 591 SGISKLPEILVTLFNLKYLNLSKTEVKELPRDFHRLINLETLN 633
>gi|3877646|emb|CAB05742| (Z83230) similar to Leucine Rich Repeat (2 copies) (2 domains);
cDNA EST yk417h6.5 comes from this gene; cDNA EST
yk486h1.5 comes from this gene [Caenorhabditis elegans]
Length = 230
Score = 34.8 bits (78), Expect = 0.73
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 111 ISNLKHLTLMNLNLYKLPSRFENLKDLKILNLVKN 7
+++L+HL L N + LP F NLK LK L+L KN
Sbjct: 83 LTSLQHLNLYNNQIEDLPLSFANLKSLKWLDLKKN 117
>gi|3168891 (AF068716) contains similarity to repeated leucine-rich (LRRa)
domains [Caenorhabditis elegans]
Length = 717
Score = 34.4 bits (77), Expect = 0.95
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 153 IETGYNKLPKIFCEISNLKHLTLMNLN---LYKLPSRFENLKDLKILNLVKNEF 1
++ N+L + EI NL L +NLN + KLP +N K L LNL N F
Sbjct: 64 LDVSDNELAVLPAEIGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPF 117
Score = 33.2 bits (74), Expect = 2.1
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 201 LENYKKIKVTNLINEGIETGYNKLPKIFCEISNLKHLTLMNLNLYKLPSRFENLKDLKIL 22
++N K + NL + + +LP+ CE S++ L+L +L LPS +L +L++L
Sbjct: 101 MQNCKLLTTLNLSSNP----FTRLPETICECSSITILSLNETSLTLLPSNIGSLTNLRVL 156
Query: 21 NLVKN 7
N
Sbjct: 157 EARDN 161
>gi|2498866|sp|Q15404|RSU1_HUMAN RAS SUPPRESSOR PROTEIN 1 (RSU-1) (RSP-1 PROTEIN) (RSP-1)
>gi|2135399|pir||I60122 homologous to mouse Rsu-1 -
human >gi|434051 (L12535) homologous to mouse Rsu-1;
putative [Homo sapiens]
Length = 277
Score = 34.4 bits (77), Expect = 0.95
Identities = 22/61 (36%), Positives = 30/61 (49%)
Query: 189 KKIKVTNLINEGIETGYNKLPKIFCEISNLKHLTLMNLNLYKLPSRFENLKDLKILNLVK 10
K ++V N N IE +LP + LKHL L L LP F +L L++L+L
Sbjct: 63 KNLEVLNFFNNQIE----ELPTQISSLQKLKHLNLGMNRLNTLPRGFGSLPALEVLDLTY 118
Query: 9 N 7
N
Sbjct: 119 N 119
Score = 31.3 bits (69), Expect = 8.2
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 141 YNKL---PKIFCEISNLKHLTLMNLNLYKLPSRFENLKDLKILNLVKN 7
+NKL P E+ NL+ L N + +LP++ +L+ LK LNL N
Sbjct: 49 HNKLTMVPPNIAELKNLEVLNFFNNQIEELPTQISSLQKLKHLNLGMN 96
>gi|1708880|sp|P51886|LUM_RAT LUMICAN PRECURSOR (LUM) (KERATAN SULFATE PROTEOGLYCAN)
>gi|1083708|pir||S52284 lumicon, secretory intersticial
proteoglycan precursor - rat >gi|643024|emb|CAA58858|
(X84039) lumican, secretory intersticial proteoglycan
[Rattus norvegicus]
Length = 338
Score = 34.0 bits (76), Expect = 1.2
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 16/63 (25%)
Query: 273 YLNELYNEISNNSTFLCSFTLYKFLE---NYKKIKVTNLINEGIETGY---NKLPKI--- 121
YL +NE++++ SF + LE +Y K+K +NE +E Y NKL K
Sbjct: 233 YLRLSHNELADSGVPGNSFNISSLLELDLSYNKLKSIPTVNENLENYYLEVNKLEKFDVK 292
Query: 120 -FCEI------SNLKHLTL 85
FC+I S +KHL L
Sbjct: 293 SFCKILGPLSYSKIKHLRL 311
>gi|3132526 (AF051151) Toll/interleukin-1 receptor-like protein 3 [Homo
sapiens]
Length = 858
Score = 34.0 bits (76), Expect = 1.2
Identities = 18/35 (51%), Positives = 26/35 (73%), Gaps = 1/35 (2%)
Query: 108 SNLKHLTLMNLNLYKLPSR-FENLKDLKILNLVKNE 4
S+++HL L + ++ L SR FE LKDLK+LNL N+
Sbjct: 288 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNK 323
>gi|4049760 (AF063866) ORF MSV241 leucine rich repeat gene family protein,
similar to Amsacta moorei entomopoxvirus Q3 ORF
SW:P28854 [Melanoplus sanguinipes entomopoxvirus]
Length = 387
Score = 33.6 bits (75), Expect = 1.6
Identities = 37/117 (31%), Positives = 61/117 (51%), Gaps = 9/117 (7%)
Query: 375 LLVIFLRLITCTNYKITSDDY-DSLHDL--IIYSDDVYLN----ELYNEISNNSTFLCSF 217
L + L+LI C KI + ++L++L + S+++ N +L N I + + C+
Sbjct: 227 LSITILKLI-CNECKIKDFKFLENLYNLKELDISENINSNISECKLSNSILKFTCYKCNI 285
Query: 216 TLYKFLENYKKIKVTNLINEGIETGYN--KLPKIFCEISNLKHLTLMNLNLYKLPSRFEN 43
+KFLEN +K N I+E I + + KLP + + K N+ +K R N
Sbjct: 286 KDFKFLENLYNLKELN-ISENINSNISECKLPNSILKFTCYK----CNIKNFKFLERLCN 340
Query: 42 LKDLKI 25
LK L I
Sbjct: 341 LKYLNI 346
>gi|3335351 (AC004512) Similar to ERECTA receptor protein kinase gb|D83257 from
A. thaliana. ESTs gb|T41629 and gb|AA586072 come from
this gene. [Arabidopsis thaliana]
Length = 720
Score = 33.6 bits (75), Expect = 1.6
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 180 KVTNLINEGIETGYNKLPKIFCEISNLKHLTLMNLNLY-KLPSRFENLKDLKILNLVKNE 4
KV +L G+ P + C++S+L+ L L + N +PS F +L++L+ LNL +N
Sbjct: 74 KVLSLTLSGLNLSSQIHPSL-CKLSSLQSLDLSHNNFSGNIGSLRNLRTLNLSRNR 132
Query: 3 F 1
F
Sbjct: 133 F 133
>gi|4512674|gb|AAD21728| (AC006931) hypothetical protein [Arabidopsis thaliana]
Length = 462
Score = 33.6 bits (75), Expect = 1.6
Identities = 24/84 (28%), Positives = 44/84 (51%), Gaps = 1/84 (1%)
Query: 258 YNEISNNSTFLCSFTLYKFLENYKKIKVTNLINEGIETGYNKLPKIFCEISNLKHLTLMN 79
Y + NN F+ FL +++++ N G+ +P+ + +++NL L+L N
Sbjct: 289 YFIMDNNPMFVALPVELGFLPKLQELQLENSGYSGV------IPESYTKLTNLSSLSLAN 342
Query: 78 LNLY-KLPSRFENLKDLKILNLVKN 7
L ++PS FE+L + LNL +N
Sbjct: 343 NRLTGEIPSGFESLPHVFHLNLSRN 367
>gi|3056600 (AC004255) T1F9.21 [Arabidopsis thaliana]
Length = 766
Score = 33.2 bits (74), Expect = 2.1
Identities = 20/64 (31%), Positives = 34/64 (52%)
Query: 207 KFLENYKKIKVTNLINEGIETGYNKLPKIFCEISNLKHLTLMNLNLYKLPSRFENLKDLK 28
+F+ +K+ V +L +NKLP+ + +L+ L L N ++ +LP + LK L
Sbjct: 440 EFIRYMQKLVVLDL---SYNRDFNKLPEQISGLVSLQFLDLSNTSIKQLPVGLKKLKKLT 496
Query: 27 ILNL 16
LNL
Sbjct: 497 FLNL 500
>gi|3845236 (AE001407) T-complex protein 1 (HSP60 fold superfamily) [Plasmodium
falciparum]
Length = 540
Score = 33.2 bits (74), Expect = 2.1
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 207 KFLENYKKIKVTNLINEGIETGYNKLPKIFCEISNLKHLTLMNLNLYKLPSRFENLKDLK 28
K+++N+KK V +I G + + + FC+ +N+ L K+ S+FE L+ K
Sbjct: 275 KYIDNFKKANVDVIIVNG---AISDIAQHFCDTNNIMTL--------KITSKFETLRICK 323
Query: 27 ILNL 16
+LN+
Sbjct: 324 LLNI 327
>gi|1361985|pir||A57072 disease resistance protein RPM1 - Arabidopsis thaliana
>gi|963017|emb|CAA61131| (X87851) disease resistance
gene [Arabidopsis thaliana]
Length = 926
Score = 32.8 bits (73), Expect = 2.8
Identities = 22/74 (29%), Positives = 37/74 (49%), Gaps = 2/74 (2%)
Query: 240 NSTFLCSFTLYKF--LENYKKIKVTNLINEGIETGYNKLPKIFCEISNLKHLTLMNLNLY 67
+S +CS +K L + ++ +L + I +KLP + NLK+L L +
Sbjct: 562 HSLLVCSSAKHKMELLPSLNLLRALDLEDSSI----SKLPDCLVTMFNLKYLNLSKTQVK 617
Query: 66 KLPSRFENLKDLKILN 19
+LP F L +L+ LN
Sbjct: 618 ELPKNFHKLVNLETLN 633
>gi|3649753|emb|CAB11102| (Z98547) predicted using hexExon; MAL3P3.2 (PFC0330w), PDZ domain
protein, len: 700 aa [Plasmodium falciparum]
Length = 699
Score = 32.8 bits (73), Expect = 2.8
Identities = 36/107 (33%), Positives = 55/107 (50%), Gaps = 12/107 (11%)
Query: 345 CTNYKITSDDY----DSLHDLIIYSD------DVYLNELYNEISNNSTFLCSFTLYKFLE 196
C +Y + S + +L DLI +S+ D +++LY E NN + TL K LE
Sbjct: 338 CVSYNMKSHTFKRSISNLSDLIEFSNKLKYVLDERIHKLYYEDKNNENAYLNKTLRKELE 397
Query: 195 NYKKIK-VTNLINEGIETGYNKLPKIFCEISNLKHLTLMNLNLYKLPSRFE-NLKDLKI 25
KK + VTNL + ++ S+LK + N+YK +E L DLK+
Sbjct: 398 IGKKERDVTNLSKKNLQMSIE---------SSLKLIEKCMQNMYK--QNYEITLHDLKL 445
>gi|1504040|dbj|BAA13219| (D86983) similar to D.melanogaster peroxidasin(U11052) [Homo
sapiens]
Length = 1496
Score = 32.8 bits (73), Expect = 2.8
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 129 PKIFCEISNLKHLTLMNLNLYKLPS-RFENLKDLKILNLVKNE 4
P F + NL L L N + ++PS FE+L++LK L L KNE
Sbjct: 96 PGAFRRLRNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNE 138
>gi|3252977 (AF068919) Ras-binding protein SUR-8 [Caenorhabditis elegans]
>gi|3293318 (AF054827) leucine-rich repeat protein SOC-2
[Caenorhabditis elegans]
Length = 559
Score = 32.8 bits (73), Expect = 2.8
Identities = 18/43 (41%), Positives = 27/43 (61%)
Query: 132 LPKIFCEISNLKHLTLMNLNLYKLPSRFENLKDLKILNLVKNE 4
LP+ ++ NL+ L L N L KLP++ NL L+ L+L +NE
Sbjct: 390 LPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENE 432
>gi|1401355 (U61957) contains similarity to leucine-rich repeats
[Caenorhabditis elegans]
Length = 613
Score = 32.8 bits (73), Expect = 2.8
Identities = 18/43 (41%), Positives = 27/43 (61%)
Query: 132 LPKIFCEISNLKHLTLMNLNLYKLPSRFENLKDLKILNLVKNE 4
LP+ ++ NL+ L L N L KLP++ NL L+ L+L +NE
Sbjct: 436 LPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENE 478
Score = 32.5 bits (72), Expect = 3.7
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 216 TLYKFLENYKKIK-VTNLINEGIETGYNK---LPKIFCEISNLKHLTLMNLNLYKLPSRF 49
TL+ F+ ++ + NLI GI+ NK LP ++ NLK L L L LP
Sbjct: 120 TLFLFISKPQETSFLENLIISGIKNFQNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSL 179
Query: 48 ENLKDLKILNLVKNE 4
+L+ L+ L+L N+
Sbjct: 180 ASLESLETLDLRHNK 194
>gi|4092771 (AF105139) disease resistance gene homolog 1A [Brassica napus]
Length = 927
Score = 32.5 bits (72), Expect = 3.7
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 147 TGYNKLPKIFCEISNLKHLTLMNLNLYKLPSRFENLKDLKILN 19
+G KLP + NLK+L L + +LP F L +L+ LN
Sbjct: 592 SGVTKLPDFLVTLFNLKYLNLSKTEVKELPRDFHRLINLETLN 634
>gi|1350783|sp|P47735|RLK5_ARATH RECEPTOR-LIKE PROTEIN KINASE 5 PRECURSOR >gi|282883|pir||S27756
receptor-like protein kinase precursor - Arabidopsis
thaliana >gi|166850 (M84660) receptor-like protein
kinase [Arabidopsis thaliana] >gi|2842492|emb|CAA16889|
(AL021749) receptor-like protein kinase 5 precursor
(RLK5) [Arabidopsis thaliana]
Length = 999
Score = 32.1 bits (71), Expect = 4.8
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 18/106 (16%)
Query: 339 NYKITSDDYDSLHDLIIYSDDVYLNELYNEISNNSTFLCSFTLYKFLE------------ 196
N +++DD+D+ H+LI S D+ N L I + F + KFLE
Sbjct: 102 NGSLSADDFDTCHNLI--SLDLSENLLVGSIPKSLPF--NLPNLKFLEISGNNLSDTIPS 157
Query: 195 ---NYKKIKVTNLINEGIETGYNKLPKIFCEISNLKHLTLMNLNLY---KLPSRFENLKD 34
++K++ NL + +P ++ LK L L NL+ ++PS+ NL +
Sbjct: 158 SFGEFRKLESLNLAGNFLS---GTIPASLGNVTTLKELKLA-YNLFSPSQIPSQLGNLTE 213
Query: 33 LKIL 22
L++L
Sbjct: 214 LQVL 217
>gi|548879|sp|Q01730|RSU1_MOUSE RAS SUPPRESSOR PROTEIN 1 (RSU-1) (RSP-1 PROTEIN) (RSP-1)
>gi|284990|pir||S25770 RSP-1 protein - mouse
>gi|54015|emb|CAA44765| (X63039) p33 RSP-1 [Mus
musculus]
Length = 277
Score = 32.1 bits (71), Expect = 4.8
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 189 KKIKVTNLINEGIETGYNKLPKIFCEISNLKHLTLMNLNLYKLPSRFENLKDLKILNLVK 10
K ++V N N IE +LP + LKHL L L LP F + + L++L L
Sbjct: 63 KNLEVLNFFNNQIE----ELPTQISSLQKLKHLNLGMNRLNTLPRGFGSSRLLEVLELTY 118
Query: 9 N 7
N
Sbjct: 119 N 119
>gi|2558656 (AC002354) No definition line found [Arabidopsis thaliana]
Length = 1339
Score = 32.1 bits (71), Expect = 4.8
Identities = 36/122 (29%), Positives = 59/122 (47%), Gaps = 7/122 (5%)
Query: 381 NXLLVIFLRLITCTNYKITSDDYDSLHDLIIYSDDVYLNELYNEISNNSTFLCSFTLYKF 202
N +I L L C+ + D +L +L + + E+ ++ L ++
Sbjct: 575 NLASLIKLMLSGCSKLQNIQDLPTNLKELYLAGTSI------REVPSSICHLTQLVVFD- 627
Query: 201 LENYKKIK-----VTNLINEG--IETGYNKLPKIFCEISNLKHLTLMNLNLYKLPSRFEN 43
EN KK++ + NLI+ I +G ++L I NL+HL L + KLPS FE+
Sbjct: 628 AENCKKLQDLPMGMGNLISLTMLILSGCSELRSIPDLPRNLRHLNLAETPIKKLPSSFED 687
Query: 42 LKDLKILNL 16
L L L+L
Sbjct: 688 LTKLVSLDL 696
>gi|3461839 (AC005315) putative receptor protein kinase [Arabidopsis thaliana]
Length = 786
Score = 32.1 bits (71), Expect = 4.8
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 186 KIKVTNLINEGIETGYNKLPKIFCEISNLKHLTLMNLNLYKL-PSRFENLKDLKILNLVK 10
KI NL G+ TG LP +F ++ ++ L L N +L L PS N+K L +L+L
Sbjct: 309 KIISLNLSASGL-TG--SLPSVFQNLTQIQELDLSNNSLTGLVPSFLANIKSLSLLDLSG 365
Query: 9 NEF 1
N F
Sbjct: 366 NNF 368
>gi|2213599 (AC000348) T7N9.19 [Arabidopsis thaliana]
Length = 1556
Score = 32.1 bits (71), Expect = 4.8
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 201 LENYKKIKVTNLINEGIETGYNKLPKIFCEISNLKHLTLMNLNLYKLPSRFENLKDLKIL 22
LEN ++++ N +LPK F ++ +L L + + +LP F NL +L +L
Sbjct: 1148 LENLVELRMNNC------KMLKRLPKSFGDLKSLHRLYMQETLVAELPESFGNLSNLMVL 1201
Query: 21 NLVK 10
++K
Sbjct: 1202 EMLK 1205
>gi|4455310|emb|CAB36845| (AL035528) putative disease resistance protein [Arabidopsis
thaliana]
Length = 741
Score = 32.1 bits (71), Expect = 4.8
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 135 KLPKIFCEISNLKHLTLMNLNLY-KLPSRFENLKDLKILNLVKN 7
++PK CE+ NL+ L L N N +P FENL L +L+L N
Sbjct: 363 EIPKTICELDNLRILVLSNNNFSGSIPRCFENL-HLYVLHLRNN 405
Score = 31.3 bits (69), Expect = 8.2
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 132 LPKIFCEISNLKHLTLMNLNLY-KLPSRFENLKDLKILNLVKNEF 1
LP + LK L L+N NL+ K+PS NL L L+L N+F
Sbjct: 66 LPDSIGNLKRLKVLVLVNCNLFGKIPSSLGNLSYLTHLDLSYNDF 110
>gi|3894389 (AF053996) Hcr2-2A [Lycopersicon pimpinellifolium]
Length = 802
Score = 31.7 bits (70), Expect = 6.3
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 195 NYKKIKVTNLINEGIETGYNKLPKIFCEISNLKHLTLMNLNLY-KLPSRFENLKDLKILN 19
N +K+ L ++ K+P+ IS L+ LT+ NL ++PS NL+ L+IL+
Sbjct: 357 NLTSLKILYLRRNNLK---GKVPQCLGNISGLQVLTMSPNNLSGEIPSSISNLRSLQILD 413
Query: 18 LVKN 7
L +N
Sbjct: 414 LGRN 417
>gi|4493979|emb|CAB39038| (AL034559) predicted using hexExon; MAL3P7.22 (PFC0965w),
Hypothetical protein, len: 2707 aa [Plasmodium
falciparum]
Length = 2706
Score = 31.7 bits (70), Expect = 6.3
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 375 LLVIFLRLITCTNYK--ITSDDYDSLHDLIIYSDDVYLNELYNEISNNSTFLCSFTLYKF 202
LL F +C NY + ++ D +H I Y +Y +L N + L LYK
Sbjct: 2070 LLPRFSSFNSCENYLDFLKNEKIDPIHIYISYYKYIY-GKLRNRDKSYKNLLVYDILYKV 2128
Query: 201 LENYKK---IKVTNLINEGIETGYNKLPKIFCEISNLKHLTLMN 79
L+NY+K + T + N+ N F + S++K + N
Sbjct: 2129 LQNYRKSMSLYNTKIDNKNERNVNNIYCDKFMKSSSIKQIDYFN 2172
>gi|3287742|sp|Q58692|BIOB_METJA BIOTIN SYNTHASE (BIOTIN SYNTHETASE) >gi|2127784|pir||G64461 biotin
synthetase - Methanococcus jannaschii >gi|1591934
(U67570) biotin synthetase (bioB) [Methanococcus
jannaschii]
Length = 358
Score = 31.7 bits (70), Expect = 6.3
Identities = 29/94 (30%), Positives = 45/94 (47%)
Query: 309 SLHDLIIYSDDVYLNELYNEISNNSTFLCSFTLYKFLENYKKIKVTNLINEGIETGYNKL 130
SL + I + D +YL YN S +F + ++N KIK+ +IN ++G K
Sbjct: 13 SLKNKIDFDDALYL---YNNFSAIDLLYLAFKIKNRIKNNSKIKLCAIIN--AKSGKCKE 67
Query: 129 PKIFCEISNLKHLTLMNLNLYKLPSRFENLKDLK 28
IFC S + N+ +Y L S+ E L+ K
Sbjct: 68 DCIFCSQS---IYSKCNIPIYPLKSKKEILEYAK 98
>gi|2792220 (AF032688) NBS-LRR type resistance protein [Oryza sativa]
Length = 571
Score = 31.7 bits (70), Expect = 6.3
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 12/100 (12%)
Query: 315 YDSLHDLI--------IYSDDVYLNELYNEISNNSTFLC---SFTLYKFLENYKKIKVTN 169
+D++HDL + DD + + S + +F C S T ++ +KK +
Sbjct: 351 HDAMHDLAQSVSMDECLRLDDPPNSSSTSRSSRHLSFSCHNRSRTSFEDFLGFKKARTLL 410
Query: 168 LINEGIETGYNKLPK-IFCEISNLKHLTLMNLNLYKLPSRFENLKDLKILNL 16
L+N G ++ + +P +F + L L L ++ +LP NLK L+ LNL
Sbjct: 411 LLN-GYKSRTSPIPSDLFLMLRYLHVLELNRRDITELPDSIGNLKMLRYLNL 461
>gi|4049911 (AF063866) ORF MSV227 leucine rich repeat gene family protein,
similar to Amsacta moorei entomopoxvirus Q3 ORF
SW:P28854 [Melanoplus sanguinipes entomopoxvirus]
Length = 306
Score = 31.7 bits (70), Expect = 6.3
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 270 LNEL-YNEISNNSTFLCSFTLYKFLENYKKIKVTNLINEGIETGYNKLPKIFCEISNL-- 100
LN+L +N I NN L FT K L N K++ + ++I++ ++ N+
Sbjct: 99 LNKLEFNVIVNNE--LNDFTSLKILVNLKELHINSIIDK-------------LQLKNILL 143
Query: 99 -KHLTLMNLN-LYKLPSRFENLKDLKILNLV 13
K+L + N + +Y F+NL++LKIL+++
Sbjct: 144 PKNLEIFNTDAVYIKKDIFKNLENLKILSII 174
>gi|3649772|emb|CAB11121| (Z98547) predicted using hexExon; MAL3P3.18 (PFC0425w), Hypothetical
protein, len: 4551 aa [Plasmodium falciparum]
Length = 4550
Score = 31.3 bits (69), Expect = 8.2
Identities = 24/92 (26%), Positives = 45/92 (48%)
Query: 282 DDVYLNELYNEISNNSTFLCSFTLYKFLENYKKIKVTNLINEGIETGYNKLPKIFCEISN 103
+D +N++ N +N++ Y FL Y+KI ++ I GI + I +I +
Sbjct: 1329 NDKEMNDILNNKNNDTDK--KLNKYNFLMEYQKIISSDKITSGISNNMKDIKNI-KDIKD 1385
Query: 102 LKHLTLMNLNLYKLPSRFENLKDLKILNLVKN 7
+K + N+ K +++KD+K + VKN
Sbjct: 1386 IK--DIKNIKDIKDIKDIKDIKDIKDIKNVKN 1415
>gi|1653514|dbj|BAA18427| (D90914) hypothetical protein [Synechocystis sp.]
Length = 146
Score = 31.3 bits (69), Expect = 8.2
Identities = 11/36 (30%), Positives = 24/36 (66%)
Query: 291 IYSDDVYLNELYNEISNNSTFLCSFTLYKFLENYKK 184
+++D ++ L++ + +F+C+FT+Y +L N KK
Sbjct: 49 VFADSLFRLPLFHVLGLIFSFICAFTIYIYLRNLKK 84
>gi|3894385 (AF053994) Hcr2-0A [Lycopersicon esculentum]
Length = 826
Score = 31.3 bits (69), Expect = 8.2
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 195 NYKKIKVTNLINEGIETGYNKLPKIFCEISNLKHLTLMNLNLYK-LPSRFENLKDLKILN 19
N +K+ L ++ K+P+ IS L+ LT+ NL +PS NL+ L+IL+
Sbjct: 381 NLTSLKILYLRRNNLK---GKVPQCLGNISGLQVLTMSRNNLSGVIPSSISNLRSLQILD 437
Query: 18 LVKN 7
L +N
Sbjct: 438 LGRN 441
>gi|4049897 (AF063866) ORF MSV010 leucine rich repeat gene family protein,
similar to Amsacta moorei entomopoxvirus Q3 ORF
SW:P28854 [Melanoplus sanguinipes entomopoxvirus]
Length = 611
Score = 31.3 bits (69), Expect = 8.2
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 228 LCSFTLYKFLENYKKIKVTNLI-NEGIETGYNKLPK-------IFCEISNLKHLTLMNLN 73
+C+ T +KFLE ++ N+ N KLP ++C IS+ K L
Sbjct: 484 ICNITDFKFLEPLINLQKLNICGNHDSNISICKLPLSLIELNCMYCYISDFKFL------ 537
Query: 72 LYKLPSRFENLKDLKILNLVKN 7
E LK LKILN+ KN
Sbjct: 538 --------EPLKSLKILNICKN 551
>gi|1469876|dbj|BAA09768| (D63481) The KIAA0147 gene product is related to adenylyl cyclase.
[Homo sapiens]
Length = 1551
Score = 31.3 bits (69), Expect = 8.2
Identities = 16/44 (36%), Positives = 26/44 (58%)
Query: 138 NKLPKIFCEISNLKHLTLMNLNLYKLPSRFENLKDLKILNLVKN 7
++LP F ++ +L HL L +++L LP NL +L L L +N
Sbjct: 52 SRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELREN 95
>gi|2781362 (AC003113) F24O1.18 [Arabidopsis thaliana]
Length = 786
Score = 31.3 bits (69), Expect = 8.2
Identities = 19/55 (34%), Positives = 33/55 (59%), Gaps = 4/55 (7%)
Query: 165 INEGIETGYNKLPKIFCEISNLKHLTLMNLNLYKL----PSRFENLKDLKILNLVKNEF 1
+NE I + N + +I NLK++T+ +++ +L PS N+K L+ LN+ N F
Sbjct: 246 LNEIILSNDNLTGCLPPQIGNLKNVTVFDISFNRLSGPLPSSIGNMKSLEQLNVANNRF 304
>gi|1345878|sp|P49606|CYAA_USTMA ADENYLATE CYCLASE (ATP PYROPHOSPHATE-LYASE) (ADENYLYL CYCLASE)
>gi|1078670|pir||A55481 adenylate cyclase (EC 4.6.1.1)
uac1 - smut fungus (Ustilago maydis) >gi|603940 (L33918)
uac1 [Ustilago maydis]
Length = 2493
Score = 31.3 bits (69), Expect = 8.2
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 219 FTLYKFLENYKKIKVTNLINEGIETGYNKLPKIFCEISNLKHLTLMNLNLYKLPSRFENL 40
F L + + ++ N+ N E + PK+ C++ +L L + ++ +LP+ NL
Sbjct: 1193 FDLPSYFSSISTLRNLNISNNRFE----EFPKVICDVPSLVDLDVSFNSITELPAEIANL 1248
Query: 39 KDLKILNLVKNE 4
+L+ L NE
Sbjct: 1249 INLERFILAGNE 1260
Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
Posted date: Apr 12, 1999 12:54 PM
Number of letters in database: 112,640,273
Number of sequences in database: 368,476
Lambda K H
0.318 0.135 0.00
Gapped
Lambda K H
0.270 0.0470 4.94e-324
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105512670
Number of Sequences: 368476
Number of extensions: 1731775
Number of successful extensions: 4857
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 4780
Number of HSP's gapped (non-prelim): 115
length of query: 265
length of database: 112640273
effective HSP length: 54
effective length of query: 210
effective length of database: 92742569
effective search space: 19475939490
effective search space used: 19475939490
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 68 (30.9 bits)