BLASTX 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 14VII46R
         (867 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           369,800 sequences; 113,023,754 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|3367790|emb|CAA20055| (AL031154) putative transmembrane trans...    47  1e-04
gi|4539333|emb|CAB37481| (AL035539) putative amino acid transpor...    39  0.042
gi|549723|sp|P36062|YKO6_YEAST HYPOTHETICAL 75.5 KD PROTEIN IN S...    37  0.16
gi|3873920|emb|CAA97776| (Z73423) cDNA EST EMBL:Z14908 comes fro...    36  0.28
gi|2576363 (U39783) amino acid transport protein [Arabidopsis th...    36  0.36
gi|1730758|sp|P50944|YNK1_YEAST HYPOTHETICAL 80.0 KD PROTEIN IN ...    36  0.47
gi|2213629 (AC000103) F21J9.21 [Arabidopsis thaliana]                  34  1.1
gi|3880932|emb|CAA16336| (AL021481) cDNA EST EMBL:T01200 comes f...    34  1.1
gi|1351692|sp|Q10074|YAN9_SCHPO HYPOTHETICAL 73.1 KD PROTEIN C3H...    34  1.4
gi|3970652|emb|CAA54630| (X77499) amino acid permease [Arabidops...    34  1.4
gi|1076288|pir||S51168 amino acid permease AAP3 - Arabidopsis th...    34  1.4
gi|453980|emb|CAA82843| (Z29946) gamma-TIP-like protein [Trifoli...    34  1.8
gi|80410|pir||A26470 spore germination protein II - Bacillus sub...    34  1.8
gi|474198 (U00040) contains an ANK repeat similar to ANK motifs ...    34  1.8
gi|1353046|sp|P47082|YJX1_YEAST HYPOTHETICAL 65.3 KD PROTEIN IN ...    34  1.8
gi|3329286 (AE001354) Tyrosine Transport [Chlamydia trachomatis]       34  1.8
gi|1708033|sp|P07869|GRA2_BACSU SPORE GERMINATION PROTEIN A2 >gi...    33  2.4
gi|3402690 (AC004697) hypothetical protein, 3' partial [Arabidop...    33  2.4
gi|2634160|emb|CAB13660| (Z99113) similar to spore germination p...    33  2.4
gi|1351502|sp|P47427|Y181_MYCGE HYPOTHETICAL PROTEIN MG181 >gi|1...    33  3.1
gi|3979936|emb|CAA22315| (AL034393) predicted using Genefinder; ...    32  4.1
gi|4218957 (AF091712) cytoplasmic polyadenylation element-bindin...    32  4.1
gi|4519513|dbj|BAA75638| (AB011681) ZOR-2 [Danio rerio]                32  5.4
gi|1651425|dbj|BAA35631| (D90728) Dimethylsulfoxide reductase ch...    32  7.0
gi|882738 (U29581) ORF_o409 [Escherichia coli] >gi|1789211 (AE00...    32  7.0
gi|118699|sp|P18777|DMSC_ECOLI ANAEROBIC DIMETHYL SULFOXIDE REDU...    32  7.0
gi|1040929 (U35260) NADH dehydrogenase subunit 6 [Anopheles aqua...    32  7.0
gi|1040943 (U35267) NADH dehydrogenase subunit 6 [Anopheles nune...    32  7.0
gi|1040947 (U35269) NADH dehydrogenase subunit 6 [Anopheles nune...    32  7.0
gi|4377294|gb|AAD19105| (AE001677) Tyrosine Transport [Chlamydia...    32  7.0
gi|2231134 (L43052) polyprotein [equine rhinovirus 1]                  31  9.2
gi|3293031|emb|CAA07563| (AJ007574) amino acid carrier [Ricinus ...    31  9.2
gi|541848|pir||A48187 amino acid transport protein I - Arabidops...    31  9.2
gi|2654019 (AF031649) neutral amino acid transport system II [Ar...    31  9.2
gi|1040935 (U35263) NADH dehydrogenase subunit 6 [Anopheles bena...    31  9.2
gi|1588015|prf||2207404A polyprotein [equine rhinovirus 1]             31  9.2
gi|3043878 (U95840) transmembrane protein Tmp5 [Lactococcus lactis]    31  9.2


>gi|3367790|emb|CAA20055| (AL031154) putative transmembrane transporter [Schizosaccharomyces pombe] Length = 420 Score = 47.3 bits (110), Expect = 1e-04 Identities = 30/124 (24%), Positives = 57/124 (45%) Query: 442 MGKISVFKGSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIAATAY 621 +GK F + + T+ G G+LSLP AF G L + +F+ LY ++ A Sbjct: 16 IGKAGFFSSVINLANTILGAGILSLPNAFTKTGLLFGCLTIVFSAFASFLGLYFVSQCAA 75 Query: 622 YSKLEDPTFFSVCANANPVLGYLVDIFVILNGFLTAAIYICNISNWIKDSILPTVKINNA 801 +F +V + P L + D + + F A Y+ + + + I P++ + ++ Sbjct: 76 RLPRGKASFAAVAKHTFPSLAVVFDASIAVKCFGVAVSYLVIVGD-LMPQIAPSLGL-SS 133 Query: 802 PLYL 813 P++L Sbjct: 134 PMFL 137
>gi|4539333|emb|CAB37481| (AL035539) putative amino acid transport protein [Arabidopsis thaliana] Length = 436 Score = 39.1 bits (89), Expect = 0.042 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 10/87 (11%) Query: 454 SVFKGSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIAAT------ 615 S FK + + G GVL LP AF GWL+ +L V ++T + + T Sbjct: 35 SQFKTFANVFIAVVGAGVLGLPYAFKRTGWLMGVLLLVSVSVLTHHCMMLLVYTRRKLDS 94 Query: 616 --AYYSKLED--PTFFSVCANANPVLGYLVDIFVILN 714 A SK+ F+VC + + +VD+F+IL+ Sbjct: 95 FNAGISKIGSFGDLGFAVCGSLGRI---VVDLFIILS 128
>gi|549723|sp|P36062|YKO6_YEAST HYPOTHETICAL 75.5 KD PROTEIN IN SDH1-CIM5/YTA3 INTERGENIC REGION >gi|539210|pir||S37976 hypothetical protein YKL146w - yeast (Saccharomyces cerevisiae) >gi|486252|emb|CAA81988| (Z28146) ORF YKL146w [Saccharomyces cerevisiae] Length = 692 Score = 37.1 bits (84), Expect = 0.16 Identities = 19/56 (33%), Positives = 28/56 (49%) Query: 448 KISVFKGSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIAAT 615 K S K L++L + G GVL LP AF N GW S + ++++ S+ T Sbjct: 296 KSSTVKAVLLLLKSFVGTGVLFLPKAFHNGGWGFSALCLLSCALISYGCFVSLITT 351
>gi|3873920|emb|CAA97776| (Z73423) cDNA EST EMBL:Z14908 comes from this gene; cDNA EST EMBL:M89403 comes from this gene; cDNA EST EMBL:T00022 comes from this gene [Caenorhabditis elegans] Length = 506 Score = 36.4 bits (82), Expect = 0.28 Identities = 17/50 (34%), Positives = 26/50 (52%) Query: 445 GKISVFKGSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFIS 594 G S G L + + G G L+LP AF AGWL+S L +++++ Sbjct: 11 GTYSQTVGLLYVFNLIVGTGALALPKAFQTAGWLLSITLLTFSAFMSYVA 60
>gi|2576363 (U39783) amino acid transport protein [Arabidopsis thaliana] Length = 432 Score = 36.0 bits (81), Expect = 0.36 Identities = 16/37 (43%), Positives = 23/37 (61%) Query: 478 MLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTF 588 ++ ++ G GVL LP AF AGWL ++ IVG T+ Sbjct: 40 IIVSIVGTGVLGLPYAFRIAGWLAGSLGVIIVGFATY 76
>gi|1730758|sp|P50944|YNK1_YEAST HYPOTHETICAL 80.0 KD PROTEIN IN POL1-RAS2 INTERGENIC REGION >gi|2132745|pir||S58251 probable membrane protein YNL101w - yeast (Saccharomyces cerevisiae) >gi|929852|emb|CAA90525| (Z50161) ORF N2185 [Saccharomyces cerevisiae] >gi|1302014|emb|CAA95977| (Z71377) ORF YNL101w [Saccharomyces cerevisiae] Length = 713 Score = 35.6 bits (80), Expect = 0.47 Identities = 20/52 (38%), Positives = 25/52 (47%) Query: 445 GKISVFKGSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLY 600 G S K LI+L + G GVL LP AF N G S + GI ++ Y Sbjct: 295 GTTSTKKVFLILLKSFIGTGVLFLPNAFHNGGLFFSVSMLAFFGIYSYWCYY 346
>gi|2213629 (AC000103) F21J9.21 [Arabidopsis thaliana] Length = 449 Score = 34.4 bits (77), Expect = 1.1 Identities = 16/42 (38%), Positives = 23/42 (54%) Query: 481 LTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSI 606 +T M G GVLSLP A N GW + + I+T +L+ + Sbjct: 41 VTAMVGAGVLSLPYAMSNLGWGPGVTIMVMSWIITLYTLWQM 82
>gi|3880932|emb|CAA16336| (AL021481) cDNA EST EMBL:T01200 comes from this gene; cDNA EST EMBL:D72618 comes from this gene; cDNA EST yk343c3.3 comes from this gene; cDNA EST EMBL:Z14821 comes from this gene [Caenorhabditis elegans] Length = 607 Score = 34.4 bits (77), Expect = 1.1 Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 11/126 (8%) Query: 478 MLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIAATAYY-------SKLE 636 M+ M G G+LSLP+AF ++G + IL ++ ++ + + A++ ++ Sbjct: 58 MVKAMLGTGLLSLPLAFKHSGLFLGLILTVLICLICLYCMRQVVFAAHFVCNRNGRDLID 117 Query: 637 DPTFFSVCANANPVL----GYLVDIFVILNGFLTAAIYICNISNWIKDSILPTVKINNAP 804 P GY V +N F++ + C ++ D+ L NN Sbjct: 118 YANIMRGAVEMGPPWIKRNGYFFKQLVNVNMFISQLGFCCVYFVFMADN-LEDFFNNNTS 176 Query: 805 LYLVTIGVLLVLFLPSM 855 ++L +L+L +P + Sbjct: 177 IHLSKAVWMLLLLIPML 193
>gi|1351692|sp|Q10074|YAN9_SCHPO HYPOTHETICAL 73.1 KD PROTEIN C3H1.09C IN CHROMOSOME I >gi|1103510|emb|CAA92262.1| (Z68144) major facilitator superfamily protein [Schizosaccharomyces pombe] Length = 656 Score = 34.0 bits (76), Expect = 1.4 Identities = 20/57 (35%), Positives = 29/57 (50%) Query: 445 GKISVFKGSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIAAT 615 G S K L++L + G GVL LP AF G + S+ IVG+++ I + T Sbjct: 273 GNASNGKAVLLLLKSFVGTGVLFLPKAFKLGGLVFSSATLLIVGVLSHICFLLLIQT 329
>gi|3970652|emb|CAA54630| (X77499) amino acid permease [Arabidopsis thaliana] Length = 476 Score = 34.0 bits (76), Expect = 1.4 Identities = 18/53 (33%), Positives = 28/53 (51%) Query: 454 SVFKGSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIAA 612 SV+ S ++T + G GVLSL A GWL ++ + VT+ + +AA Sbjct: 33 SVWTASAHIITAVIGSGVLSLAWATAQLGWLAGPVVMLLFSAVTYFTSSLLAA 85
>gi|1076288|pir||S51168 amino acid permease AAP3 - Arabidopsis thaliana Length = 475 Score = 34.0 bits (76), Expect = 1.4 Identities = 18/53 (33%), Positives = 28/53 (51%) Query: 454 SVFKGSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIAA 612 SV+ S ++T + G GVLSL A GWL ++ + VT+ + +AA Sbjct: 33 SVWTASAHIITAVIGSGVLSLAWATAQLGWLAGPVVMLLFSAVTYFTSSLLAA 85
>gi|453980|emb|CAA82843| (Z29946) gamma-TIP-like protein [Trifolium repens] Length = 247 Score = 33.6 bits (75), Expect = 1.8 Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 9/96 (9%) Query: 445 GKISVFKGSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGI---------VTFISL 597 G I++F+G + ++ + G + SL + F+ A + + L VGI +TF + Sbjct: 92 GNITLFRGIVYIIAQLIGSVLASLLLVFVTASSVPAFALSEGVGIGPALVLEIVMTFGLV 151 Query: 598 YSIAATAYYSKLEDPTFFSVCANANPVLGYLVDIFVILNGFLTAA 732 Y++ ATA DP ++ A +G++V +++ G T A Sbjct: 152 YTVYATAV-----DPKKGNIGIIAPIAIGFIVGANILVGGAFTGA 191
>gi|80410|pir||A26470 spore germination protein II - Bacillus subtilis (strain 168) Length = 364 Score = 33.6 bits (75), Expect = 1.8 Identities = 23/59 (38%), Positives = 36/59 (60%), Gaps = 4/59 (6%) Query: 430 KNTPMGKISVFKGSLIMLTTMFGVGVLSLPVAFMNA----GWLVSTILFGIVGIVTFISL 597 K TP+ K++ F+G I+ TM G G+L+LP A GW ++ IL G + + FI L Sbjct: 4 KQTPL-KLNTFQGISIVANTMLGAGLLTLPRALTTKANTDGW-ITLILEGFI-FIFFIYL 60 Query: 598 YSI 606 ++ Sbjct: 61 NTL 63
>gi|474198 (U00040) contains an ANK repeat similar to ANK motifs 2 and 12 of human ankyrin [Caenorhabditis elegans] Length = 1691 Score = 33.6 bits (75), Expect = 1.8 Identities = 18/44 (40%), Positives = 26/44 (58%), Gaps = 1/44 (2%) Query: 684 IFS*YICNTQRIFNCSHLYLQYFKLDQRQYFTNG-KNQ*CTSISC 815 I++ + N +RIF + L FK+ Q QYFTN KN + +SC Sbjct: 100 IWNPFESNIRRIFAFDRVLLSLFKISQFQYFTNSKKNSIISDLSC 144
>gi|1353046|sp|P47082|YJX1_YEAST HYPOTHETICAL 65.3 KD PROTEIN IN PRE3-SAG1 INTERGENIC REGION >gi|1077860|pir||S55188 hypothetical protein YJR001w - yeast (Saccharomyces cerevisiae) >gi|854573|emb|CAA60922| (X87611) ORF YJR83.4 [Saccharomyces cerevisiae] >gi|1015620|emb|CAA89523| (Z49501) ORF YJR001w [Saccharomyces cerevisiae] Length = 602 Score = 33.6 bits (75), Expect = 1.8 Identities = 11/36 (30%), Positives = 21/36 (57%) Query: 481 LTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTF 588 + + G+G+L+LP+ AGW++ + I + TF Sbjct: 218 INVLIGIGLLALPLGLKYAGWVIGLTMLAIFALATF 253
>gi|3329286 (AE001354) Tyrosine Transport [Chlamydia trachomatis] Length = 415 Score = 33.6 bits (75), Expect = 1.8 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 3/86 (3%) Query: 421 KALKNTPMGKISVFK---GSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFI 591 K+++ + G + + K G+L++ T G GVL++PV+ G+L +T+L +I Sbjct: 7 KSMRLSKKGILMINKMLGGALLVAGTTIGAGVLAVPVSTSEGGFLPTTLL--------YI 58 Query: 592 SLYSIAATAYYSKLEDPTFFSVCANANPV 678 + IA + Y LE T+ N N V Sbjct: 59 VSWFIAVASGYCFLEVLTWTHSRKNVNMV 87
>gi|1708033|sp|P07869|GRA2_BACSU SPORE GERMINATION PROTEIN A2 >gi|1236178 (M16189) formerly called gene II [Bacillus subtilis] >gi|2635803|emb|CAB15296| (Z99120) gerAB [Bacillus subtilis] >gi|2832823|emb|CAA11747| (AJ223978) GerAB protein [Bacillus subtilis] Length = 365 Score = 33.2 bits (74), Expect = 2.4 Identities = 23/59 (38%), Positives = 36/59 (60%), Gaps = 5/59 (8%) Query: 430 KNTPMGKISVFKGSLIMLTTMFGVGVLSLPVAFMNA-----GWLVSTILFGIVGIVTFIS 594 K TP+ K++ F+G I+ TM G G+L+LP A GW ++ IL G + + FI Sbjct: 4 KQTPL-KLNTFQGISIVANTMLGAGLLTLPRALTTKANTPDGW-ITLILEGFI-FIFFIY 60 Query: 595 LYSI 606 L ++ Sbjct: 61 LNTL 64
>gi|3402690 (AC004697) hypothetical protein, 3' partial [Arabidopsis thaliana] Length = 381 Score = 33.2 bits (74), Expect = 2.4 Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Query: 439 PMGKISVFKGSLIM-LTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTF 588 PM + S + +++ L + GVG+LS P A GWL ILF + G+++F Sbjct: 155 PMSRNSSYGQAVLNGLNVLCGVGILSTPYAAKEGGWLGLMILF-VYGLLSF 204
>gi|2634160|emb|CAB13660| (Z99113) similar to spore germination protein [Bacillus subtilis] Length = 363 Score = 33.2 bits (74), Expect = 2.4 Identities = 30/134 (22%), Positives = 62/134 (45%), Gaps = 6/134 (4%) Query: 436 TPMGKISVFKGSLIMLTTMFGVGVLSLPVAFMNA-----GWLVSTILFGIVGIVTFISLY 600 +P KI+ + ++I++ M GVL+LP GW +S +L G++ ++ + + Sbjct: 3 SPTSKITTAQATIIIINYMLAAGVLTLPRTVTEQTQSPDGW-ISVLLGGVLAVIAGMIIA 61 Query: 601 SIAATAYYSKLEDPTFFSVCAN-ANPVLGYLVDIFVILNGFLTAAIYICNISNWIKDSIL 777 ++ + TF+ + LG+L+ I V + FL + + + I D L Sbjct: 62 KLS-----QQYPKETFYEYSRHIVGKWLGHLISI-VFITYFLALGAFEVRVMSEIVDFFL 115 Query: 778 PTVKINNAPLYLVTIGVLLV 837 + P + + + VL + Sbjct: 116 ----LEGTPSWAIIMTVLWI 131
>gi|1351502|sp|P47427|Y181_MYCGE HYPOTHETICAL PROTEIN MG181 >gi|1361629|pir||A64220 hypothetical protein MG181 - Mycoplasma genitalium (SGC3) >gi|3844777 (U39697) conserved hypothetical protein [Mycoplasma genitalium] Length = 420 Score = 32.8 bits (73), Expect = 3.1 Identities = 16/60 (26%), Positives = 32/60 (52%) Query: 273 MISVRIIIGYFRKSSVYMVIFFTNETFYLSKFPGRLRPTMVCDLRFLERI*ACTNWFRYR 94 +I V + IG+ +S +++ + F F+++K PGR + + + L + NWF +R Sbjct: 31 VILVFVPIGFVFQSVIFLFVTFV---FFIAKLPGRFYSSAIKSITLLFLLLLFVNWFTFR 87
>gi|3979936|emb|CAA22315| (AL034393) predicted using Genefinder; cDNA EST yk384a7.5 comes from this gene; cDNA EST yk443f5.5 comes from this gene; cDNA EST yk443f5.3 comes from this gene; cDNA EST yk384a7.3 comes from this gene [Caenorhabditis elegans] Length = 503 Score = 32.5 bits (72), Expect = 4.1 Identities = 29/138 (21%), Positives = 65/138 (47%), Gaps = 9/138 (6%) Query: 451 ISVFKGSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIAATAYYSK 630 IS ++ ++ M G G++SLP+A +G + +L + I + + + + Sbjct: 39 ISWLMAAVFIVGDMMGAGMISLPLALGRSGLIAGCVLILLASIFSGYTGIQLGENWEMMQ 98 Query: 631 LEDPTFFSVCANANPVLGY---------LVDIFVILNGFLTAAIYICNISNWIKDSILPT 783 + P + + C P + Y +V + ++++ FL A + + IS ++L T Sbjct: 99 IRWPKYRTHCRRPYPEMAYRALGNWARQVVAVCLVVSQFLIACVLLL-ISAENFTNLLNT 157 Query: 784 VKINNAPLYLVTIGVLLVLFLPSMIDS 864 + + + + LVL+ S++ S Sbjct: 158 FFHLHLDFCVFIVAIALVLWPFSLLQS 184
>gi|4218957 (AF091712) cytoplasmic polyadenylation element-binding protein [Spisula solidissima] Length = 650 Score = 32.5 bits (72), Expect = 4.1 Identities = 15/37 (40%), Positives = 22/37 (58%), Gaps = 1/37 (2%) Query: 465 RITYHADDNVWSGCSITPSSIYECR-MACFNYIIRYCW 575 +I + +D++ S CS+ P Y CR + CF Y R CW Sbjct: 586 QIDPYLEDSICSLCSVQPGP-YFCRDLQCFKYFCRTCW 622
>gi|4519513|dbj|BAA75638| (AB011681) ZOR-2 [Danio rerio] Length = 522 Score = 32.1 bits (71), Expect = 5.4 Identities = 13/38 (34%), Positives = 19/38 (49%) Query: 465 RITYHADDNVWSGCSITPSSIYECRMACFNYIIRYCWN 578 +I + DD++ CS P + ACF Y R CW+ Sbjct: 461 QIDPYLDDSICQICSSQPGPFFCRAQACFKYYCRSCWH 498
>gi|1651425|dbj|BAA35631| (D90728) Dimethylsulfoxide reductase chain C. [Escherichia coli] Length = 195 Score = 31.7 bits (70), Expect = 7.0 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 2/100 (2%) Query: 541 WLVSTILFGIVGIVTFISLYSIAAT--AYYSKLEDPTFFSVCANANPVLGYLVDIFVILN 714 WL+ T++ G++ + + +Y+ T +YS FF P+LGYL+ Sbjct: 26 WLIVTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMFMGGPLLGYLL------- 78 Query: 715 GFLTAAIYICNISNWIKDSILPTVKINNAPLYLVTIGVLLVL 840 + + + W +LP + + L LV GV+ V+ Sbjct: 79 ------LSLAGVDGWAM-RLLPAISV----LALVVSGVVSVM 109
>gi|882738 (U29581) ORF_o409 [Escherichia coli] >gi|1789211 (AE000368) putative transporter protein [Escherichia coli] Length = 409 Score = 31.7 bits (70), Expect = 7.0 Identities = 30/126 (23%), Positives = 55/126 (42%), Gaps = 2/126 (1%) Query: 469 SLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIAATAYYSKLE--DP 642 S + T G G L LP+ +AG +V I + +T+ ++ SK + Sbjct: 13 SFALYGTAVGAGTLFLPIQLGSAGAVVLFITALVAWPLTYWPHKALCQFILSSKTSAGEG 72 Query: 643 TFFSVCANANPVLGYLVDIFVILNGFLTAAIYICNISNWIKDSILPTVKINNAPLYLVTI 822 +V +G L+ + F+ IY I+N + + + + I+ LV++ Sbjct: 73 ITGAVTHYYGKKIGNLITTLYFIAFFVVVLIYAVAITNSLTEQLAKHMVIDLRIRMLVSL 132 Query: 823 GVLLVLFL 846 GV+L+L L Sbjct: 133 GVVLILNL 140
>gi|118699|sp|P18777|DMSC_ECOLI ANAEROBIC DIMETHYL SULFOXIDE REDUCTASE CHAIN C (DMSO REDUCTASE ANCHOR SUBUNIT) >gi|78398|pir||S03787 dimethylsulfoxide reductase chain C - Escherichia coli >gi|145757 (J03412) anaerobic dimethyl sulfoxide reductase [Escherichia coli] >gi|1651423|dbj|BAA35628| (D90727) Dimethylsulfoxide reductase chain C. [Escherichia coli] >gi|1787123 (AE000191) anaerobic dimethyl sulfoxide reductase subunit C [Escherichia coli] Length = 287 Score = 31.7 bits (70), Expect = 7.0 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 2/100 (2%) Query: 541 WLVSTILFGIVGIVTFISLYSIAAT--AYYSKLEDPTFFSVCANANPVLGYLVDIFVILN 714 WL+ T++ G++ + + +Y+ T +YS FF P+LGYL+ Sbjct: 118 WLIVTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMFMGGPLLGYLL------- 170 Query: 715 GFLTAAIYICNISNWIKDSILPTVKINNAPLYLVTIGVLLVL 840 + + + W +LP + + L LV GV+ V+ Sbjct: 171 ------LSLAGVDGWAM-RLLPAISV----LALVVSGVVSVM 201
>gi|1040929 (U35260) NADH dehydrogenase subunit 6 [Anopheles aquasalis] Length = 174 Score = 31.7 bits (70), Expect = 7.0 Identities = 30/131 (22%), Positives = 68/131 (51%), Gaps = 3/131 (2%) Query: 466 GSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIAATAYYSKLEDPT 645 G ++++ T + S+ V +++ I G + ++ FI + S+++ +S T Sbjct: 27 GLMLLIQTFLTCLITSIYVKTFWFSYVLFLIFLGGM-LILFIYVTSLSSNEMFSMSFSLT 85 Query: 646 FFS-VCANANPVLGYLVDIFVILNGFLTAAIY--ICNISNWIKDSILPTVKINNAPLYLV 816 S + + +L +++D +I + F+T + N++N I ++IL K+ N P L+ Sbjct: 86 TISLIIFSIFTILFFIIDKSLI-DQFITNMEMEKLSNLNNLINENILSLNKMYNFPTNLI 144 Query: 817 TIGVLLVLFLPSMI 858 T+ ++ LFL ++ Sbjct: 145 TLLLINYLFLTLLV 158
>gi|1040943 (U35267) NADH dehydrogenase subunit 6 [Anopheles nuneztovari] Length = 174 Score = 31.7 bits (70), Expect = 7.0 Identities = 30/131 (22%), Positives = 67/131 (50%), Gaps = 3/131 (2%) Query: 466 GSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIAATAYYSKLEDPT 645 G ++++ T + S+ V +++ I G + ++ FI + S+++ +S T Sbjct: 27 GLMLLIQTFLTCLITSIYVKTFWFSYVLFLIFLGGM-LILFIYVTSLSSNEMFSMSFSLT 85 Query: 646 FFS-VCANANPVLGYLVDIFVILNGFLTAAIY--ICNISNWIKDSILPTVKINNAPLYLV 816 S + + +L +++D +I F+T + N++N I ++IL K+ N P L+ Sbjct: 86 MISLIIFSIFTILFFIIDKSLI-EQFITNMEMEKLSNMNNLINENILSLNKMYNFPTNLI 144 Query: 817 TIGVLLVLFLPSMI 858 T+ ++ LFL ++ Sbjct: 145 TLLLINYLFLTLLV 158
>gi|1040947 (U35269) NADH dehydrogenase subunit 6 [Anopheles nuneztovari] Length = 174 Score = 31.7 bits (70), Expect = 7.0 Identities = 30/131 (22%), Positives = 67/131 (50%), Gaps = 3/131 (2%) Query: 466 GSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIAATAYYSKLEDPT 645 G ++++ T + S+ V +++ I G + ++ FI + S+++ +S T Sbjct: 27 GLMLLIQTFLTCLITSIYVKTFWFSYVLFLIFLGGM-LILFIYVTSLSSNEMFSMSFSLT 85 Query: 646 FFS-VCANANPVLGYLVDIFVILNGFLTAAIY--ICNISNWIKDSILPTVKINNAPLYLV 816 S + + +L +++D +I F+T + N++N I ++IL K+ N P L+ Sbjct: 86 MISLIIFSIFTILFFIIDKSLI-EQFITNMEMEKLSNMNNLINENILSLNKMYNFPTNLI 144 Query: 817 TIGVLLVLFLPSMI 858 T+ ++ LFL ++ Sbjct: 145 TLLLINYLFLTLLV 158
>gi|4377294|gb|AAD19105| (AE001677) Tyrosine Transport [Chlamydia pneumoniae] >gi|4377296|gb|AAD19107| (AE001677) Tyrosine Transport [Chlamydia pneumoniae] Length = 396 Score = 31.7 bits (70), Expect = 7.0 Identities = 21/85 (24%), Positives = 41/85 (47%) Query: 457 VFKGSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIAATAYYSKLE 636 V GSL++ + G GVL++PV G+ +T L+ + + + S + + K E Sbjct: 5 VLGGSLLIAGSAIGAGVLAVPVLTAKGGFFPATFLYIVSWLFSMASGLCLLEVMTWMK-E 63 Query: 637 DPTFFSVCANANPVLGYLVDIFVIL 711 ++ + A +LG++ I + L Sbjct: 64 SKNPVNMLSMAESILGHVGKISICL 88
>gi|2231134 (L43052) polyprotein [equine rhinovirus 1] Length = 2247 Score = 31.3 bits (69), Expect = 9.2 Identities = 16/40 (40%), Positives = 25/40 (62%) Query: 524 ATGSDRTPTPNIVVSMISDPLKTEIFPIGVFFNAFEKKLK 405 A + RT P +VV +I+D E+F G FF+ F++KL+ Sbjct: 1059 AVAAMRTKDPVVVVMLIAD-FGLEVFDTGFFFSYFQEKLQ 1097
>gi|3293031|emb|CAA07563| (AJ007574) amino acid carrier [Ricinus communis] Length = 486 Score = 31.3 bits (69), Expect = 9.2 Identities = 15/53 (28%), Positives = 28/53 (52%) Query: 454 SVFKGSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIAA 612 +V+ S ++T + G GVLSL A GW+ + + +VT+ + ++A Sbjct: 42 TVWTASAHIITAVIGSGVLSLAWAIAQLGWIAGPAVMFLFSLVTYYTSTLLSA 94
>gi|541848|pir||A48187 amino acid transport protein I - Arabidopsis thaliana >gi|22641|emb|CAA47603| (X67124) amino acid permease I [Arabidopsis thaliana] >gi|404019 (L16240) amino acid transporter [Arabidopsis thaliana] Length = 485 Score = 31.3 bits (69), Expect = 9.2 Identities = 14/44 (31%), Positives = 23/44 (51%) Query: 478 MLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIA 609 ++T + G GVLSL A GW+ T + I +T+ + +A Sbjct: 48 IITAVIGSGVLSLAWAIAQLGWIAGTSILLIFSFITYFTSTMLA 91
>gi|2654019 (AF031649) neutral amino acid transport system II [Arabidopsis thaliana] Length = 485 Score = 31.3 bits (69), Expect = 9.2 Identities = 14/44 (31%), Positives = 23/44 (51%) Query: 478 MLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIA 609 ++T + G GVLSL A GW+ T + I +T+ + +A Sbjct: 48 IITAVIGSGVLSLAWAIAQLGWIAGTSILLIFSFITYFTSTMLA 91
>gi|1040935 (U35263) NADH dehydrogenase subunit 6 [Anopheles benarrochi] Length = 174 Score = 31.3 bits (69), Expect = 9.2 Identities = 28/131 (21%), Positives = 64/131 (48%), Gaps = 2/131 (1%) Query: 466 GSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIAATAYYSKLEDPT 645 G ++++ T + S+ V +++ I G + ++ FI + S+++ +S T Sbjct: 27 GLMLLIQTFLTCLITSIYVKTFWFSYVLFLIFLGGM-LILFIYVTSLSSNEMFSMSFKLT 85 Query: 646 FFSVCANANPVLGYLVDIFVILNGFLTAAIY--ICNISNWIKDSILPTVKINNAPLYLVT 819 S+ + + + + ++ F+T + NI+N I ++IL K+ N P L+T Sbjct: 86 MISLMIFSIFTILFFIMDKSLIEQFITNMEMEKLSNINNLINENILSLNKMYNFPTNLIT 145 Query: 820 IGVLLVLFLPSMI 858 + ++ LFL ++ Sbjct: 146 LLLINYLFLTLLV 158
>gi|1588015|prf||2207404A polyprotein [equine rhinovirus 1] Length = 2232 Score = 31.3 bits (69), Expect = 9.2 Identities = 16/40 (40%), Positives = 25/40 (62%) Query: 524 ATGSDRTPTPNIVVSMISDPLKTEIFPIGVFFNAFEKKLK 405 A + RT P +VV +I+D E+F G FF+ F++KL+ Sbjct: 1059 AVAAMRTKDPVVVVMLIAD-FGLEVFDTGFFFSYFQEKLQ 1097
>gi|3043878 (U95840) transmembrane protein Tmp5 [Lactococcus lactis] Length = 273 Score = 31.3 bits (69), Expect = 9.2 Identities = 26/84 (30%), Positives = 48/84 (56%), Gaps = 9/84 (10%) Query: 460 FKGSLIMLTTMFGVGVLSLPVAFMNAGWLVSTILFGIVGIVTFISLYSIAATAYYSKLED 639 + GS +M T F V S+P A +L + I FG++G+ +F+S ++ Y KL + Sbjct: 86 YMGSFLMPFTFF-FDVKSMPDAL----YLFTIIKFGLIGLSSFVSFKNM-----YQKLSN 135 Query: 640 PTFFSVCANANPVLGYL---------VDIFVIL 711 T S+ + A ++ +L +D+F++L Sbjct: 136 LTVLSI-STAFALMSFLTSQLEITMWLDVFILL 167 Database: Non-redundant GenBank CDS translations+PDB+SwissProt+SPupdate+PIR Posted date: Apr 17, 1999 5:33 AM Number of letters in database: 113,023,754 Number of sequences in database: 369,800 Lambda K H 0.318 0.135 0.00 Gapped Lambda K H 0.270 0.0470 4.94e-324 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 164204862 Number of Sequences: 369800 Number of extensions: 3276256 Number of successful extensions: 7743 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 7724 Number of HSP's gapped (non-prelim): 37 length of query: 289 length of database: 113023754 effective HSP length: 54 effective length of query: 234 effective length of database: 93054554 effective search space: 21774765636 effective search space used: 21774765636 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (21.7 bits) S2: 69 (31.3 bits)