BLASTX 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 14VII27R
         (444 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           369,800 sequences; 113,023,754 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|549734|sp|P36051|YKQ5_YEAST HYPOTHETICAL 105.7 KD PROTEIN IN ...    30  8.5
gi|1584497|prf||2123261AL chemosensory receptor [Caenorhabditis ...    30  8.5
gi|1176631|sp|P46569|SG11_CAEEL SRG-11 PROTEIN >gi|3879350|emb|C...    30  8.5


>gi|549734|sp|P36051|YKQ5_YEAST HYPOTHETICAL 105.7 KD PROTEIN IN TPK3-PIR1 INTERGENIC REGION
           >gi|481105|pir||S37786 hypothetical protein YKL165c -
           yeast (Saccharomyces cerevisiae)
           >gi|407483|emb|CAA81489| (Z26877) unknown [Saccharomyces
           cerevisiae] >gi|486289|emb|CAA82007| (Z28165) ORF
           YKL165c [Saccharomyces cerevisiae]
           >gi|1582540|prf||2118404A ORF [Saccharomyces cerevisiae]
           Length = 919
           
 Score = 30.1 bits (66), Expect = 8.5
 Identities = 10/23 (43%), Positives = 17/23 (73%)

Query: 209 NFIIFYSHTNLSLYMLILYMVYF 277
           N+I+FY H+  + YM +L+ +YF
Sbjct: 505 NWILFYQHSPFNFYMYLLFPLYF 527



>gi|1584497|prf||2123261AL chemosensory receptor [Caenorhabditis elegans]
           Length = 311
           
 Score = 30.1 bits (66), Expect = 8.5
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 262 IYGIFCMVNYIMVFIDLISRHISINLILLYTPKC*ILR-MFHQ 387
           IY   C V++ M+F+D+I R      ++ +TP C I+  MF++
Sbjct: 69  IYSTDCFVSFSMIFLDIIGR-----TLVYFTPLCPIIAPMFYE 106



>gi|1176631|sp|P46569|SG11_CAEEL SRG-11 PROTEIN >gi|3879350|emb|CAA84735| (Z35663) See T23F11.5
           [Caenorhabditis elegans]
           Length = 259
           
 Score = 30.1 bits (66), Expect = 8.5
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)

Query: 262 IYGIFCMVNYIMVFIDLISRHISINLILLYTPKC*ILR-MFHQ 387
           IY   C V++ M+F+D+I R      ++ +TP C I+  MF++
Sbjct: 69  IYSTDCFVSFSMIFLDIIGR-----TLVYFTPLCPIIAPMFYE 106


  Database: Non-redundant GenBank CDS
  translations+PDB+SwissProt+SPupdate+PIR
    Posted date:  Apr 17, 1999  5:33 AM
  Number of letters in database: 113,023,754
  Number of sequences in database:  369,800
  
Lambda     K      H
   0.318    0.135     0.00 

Gapped
Lambda     K      H
   0.270   0.0470 4.94e-324 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84069169
Number of Sequences: 369800
Number of extensions: 1479287
Number of successful extensions: 2259
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2258
Number of HSP's gapped (non-prelim): 3
length of query: 148
length of database: 113023754
effective HSP length: 52
effective length of query: 95
effective length of database: 93794154
effective search space: 8910444630
effective search space used: 8910444630
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 66 (30.1 bits)