BLASTX 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 14-6R2
         (718 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           369,800 sequences; 113,023,754 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|417928|sp|P32776|TFB1_YEAST RNA POLYMERASE II TRANSCRIPTION F...    41  0.009
gi|4493894|emb|CAB39003| (AL034558) predicted using hexExon; MAL...    38  0.057
gi|4100186|gb|AAD00774| (U95159) gelsolin-related protein GRP125...    36  0.29
gi|1075988|pir||S49429 hypothetical protein - Lactobacillus helv...    35  0.64
gi|1708315|sp|P15108|HS83_YEAST HEAT SHOCK COGNATE PROTEIN HSC82...    34  1.4
gi|171723 (M26044) hsc82 protein [Saccharomyces cerevisiae]            34  1.4
gi|113005|sp|P22620|ABRA_PLAFC 101 KD MALARIA ANTIGEN (P101) (AC...    34  1.4
gi|113007|sp|P23745|ABRA_PLAFG 101 KD MALARIA ANTIGEN (P101) (AC...    34  1.4
gi|539218|pir||S38038 hypothetical protein YKL201c - yeast (Sacc...    33  1.9
gi|2980817|emb|CAA82046| (Z28201) ORF YKL201c [Saccharomyces cer...    33  1.9
gi|2746308 (AF037218) unknown [Human herpesvirus 7]                    33  1.9
gi|3043712|dbj|BAA25520| (AB011166) KIAA0594 protein [Homo sapiens]    33  1.9
gi|3915759|sp|P36044|MNN4_YEAST MNN4 PROTEIN >gi|1752736|dbj|BAA...    33  1.9
gi|3649763|emb|CAB11112| (Z98547) predicted using hexExon; MAL3P...    33  2.5
gi|3878436|emb|CAB04590| (Z81568) predicted using Genefinder [Ca...    33  2.5
gi|3845272 (AE001417) hypothetical protein [Plasmodium falciparum]     33  2.5
gi|731046|sp|P40818|UBPY_HUMAN PROBABLE UBIQUITIN CARBOXYL-TERMI...    33  2.5
gi|4467113|emb|CAB37547| (AL035538) hypothetical protein [Arabid...    32  3.3
gi|3462840 (AF083875) M protein [Streptococcus pyogenes]               32  3.3
gi|2981486 (AF053464) M protein [Streptococcus pyogenes]               32  3.3
gi|3426021|dbj|BAA32395| (AB016836) heat shock 70 kD protein cog...    32  3.3
gi|3328231 (AF051784) 14S cohesin SMC1 subunit; SMC protein [Xen...    32  3.3
gi|2496852|sp|Q11102|YL17_CAEEL HYPOTHETICAL 131.5 KD PROTEIN C0...    32  3.3
gi|2127671|pir||S70793 vsaE2 protein - Mycoplasma pulmonis (SGC3...    32  4.3
gi|2127670|pir||S70797 vsaE1 protein - Mycoplasma pulmonis (SGC3...    32  4.3
gi|2507061|sp|P32489|MEI5_YEAST MEIOSIS PROTEIN 5 >gi|2132336|pi...    32  4.3
gi|2213862 (AF003086) PfSNF2L [Plasmodium falciparum]                  32  4.3
gi|83995|pir||C26696 hypothetical protein (CYb-COII intergenic r...    32  4.3
gi|348317|pir||A45612 ATPase 6 - Sauroleishmania tarentolae >gi|...    32  4.3
gi|2127600|pir||JC6009 surface-located membrane protein lmp3 - M...    32  4.3
gi|3758862|emb|CAB11147| (Z98551) predicted using hexExon; MAL3P...    32  5.6
gi|76319|pir||QQSA8T hypothetical protein B-189 - Staphylococcus...    32  5.6
gi|3845304 (AE001423) replication factor C, 140 kDa subunit (ATP...    32  5.6
gi|1722830|sp|P52531|VU79_HSV7J PROTEIN U79 >gi|1139680 (U43400)...    32  5.6
gi|3845099 (AE001373) predicted secreted protein [Plasmodium fal...    32  5.6
gi|4156029 (AE001563) TYPE III RESTRICTION ENZYME [Helicobacter ...    32  5.6
gi|477226|pir||A48426 heat shock protein HSP82 - maize >gi|30008...    32  5.6
gi|729771|sp|Q08277|HS82_MAIZE HEAT SHOCK PROTEIN 82                   32  5.6
gi|1041785 (U36927) rhoptry protein [Plasmodium yoelii]                32  5.6
gi|2982196|gb|AAC06348| (AF007865) bacitracin synthetase 3; BacC...    32  5.6
gi|2496111|sp|Q58135|Y725_METJA HYPOTHETICAL PROTEIN MJ0725 >gi|...    32  5.6
gi|1346789|sp|P03864|PRE3_STAAU PLASMID RECOMBINATION ENZYME (MO...    32  5.6
gi|1052999 (U38428) recombination protein [Staphylococcus aureus]      32  5.6
gi|2979546 (AC003680) unknown protein [Arabidopsis thaliana]           32  5.6
gi|4176527|emb|CAA22883| (AL035263) hypothetical protein [Schizo...    31  7.3
gi|3913894|sp|O67825|IF2_AQUAE TRANSLATION INITIATION FACTOR IF-...    31  7.3
gi|1771158|emb|CAA69181| (Y07861) MFP1 protein [Lycopersicon esc...    31  7.3
gi|3257342|dbj|BAA30025| (AP000004) 879aa long hypothetical puri...    31  7.3
gi|133615|sp|P28976|RRPL_TSWV1 RNA-DIRECTED RNA POLYMERASE (L PR...    31  7.3
gi|1289512 (U53861) slow myosin heavy chain 3 [Coturnix coturnix...    31  7.3
gi|3874633|emb|CAA92287| (Z68159) C33D9.6 [Caenorhabditis elegans]     31  9.6
gi|127774|sp|P08799|MYS2_DICDI MYOSIN II HEAVY CHAIN, NON MUSCLE...    31  9.6
gi|3649767|emb|CAB11116| (Z98547) predicted using hexExon; MAL3P...    31  9.6
gi|2501586|sp|Q94480|V136_DICDI VEG136 PROTEIN >gi|1513300 (U665...    31  9.6
gi|3041708|sp|P13540|MYSB_MESAU MYOSIN HEAVY CHAIN, CARDIAC MUSC...    31  9.6
gi|2314701|gb|AAD08561| (AE000650) type III restriction enzyme R...    31  9.6
gi|2501243|sp|Q00313|TOP1_CANAL DNA TOPOISOMERASE I >gi|1465731 ...    31  9.6
gi|482393|pir||A45669 neurofilament triplet M protein - rat >gi|...    31  9.6
gi|476355|pir||A46762 myosin alpha heavy chain, cardiac muscle -...    31  9.6
gi|3915779|sp|P13539|MYSA_MESAU MYOSIN HEAVY CHAIN, CARDIAC MUSC...    31  9.6
gi|4493946|emb|CAB38982| (AL034556) predicted using hexExon; MAL...    31  9.6
gi|127741|sp|P02563|MYSA_RAT MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ...    31  9.6
gi|3880432|emb|CAA91398| (Z66521) similar to kinensin-like prote...    31  9.6
gi|191618 (M76598) alpha cardiac myosin heavy chain [Mus musculus]     31  9.6
gi|3024204|sp|Q02566|MYSA_MOUSE MYOSIN HEAVY CHAIN, CARDIAC MUSC...    31  9.6
gi|416720|sp|P32985|BPS2_DESAM BPS2 PROTEIN >gi|99246|pir||S2219...    31  9.6
gi|542637|pir||S39599 class I histocompatibility antigen - Afric...    31  9.6


>gi|417928|sp|P32776|TFB1_YEAST RNA POLYMERASE II TRANSCRIPTION FACTOR B 73 KD SUBUNIT >gi|320862|pir||S31285 RNA polymerase II transcription factor B 73K chain - yeast (Saccharomyces cerevisiae) >gi|172889 (M95750) RNA polymerase II transcription factor b, 73 kDa subunit [Saccharomyces cerevisiae] >gi|849210 (U28374) Tfb1: RNA Polymerase II transcription factor B 73 kD subunit (Swiss Prot. accession number P32776) [Saccharomyces cerevisiae] Length = 642 Score = 41.0 bits (94), Expect = 0.009 Identities = 23/93 (24%), Positives = 41/93 (43%) Query: 285 NNEEDEINTHKNTIEIDDTKEETKTNIKTSDLTLXXXXXXXXXXXXXXXXTFKDIKYKIE 464 N+EEDE N +N ++IDD E KTN L + K+ K+ Sbjct: 406 NDEEDEDNDERNELKIDDLNESYKTNYAIIHLKRNAHEKTTDNDAKSSADSIKNADLKVS 465 Query: 465 DEEYLRKILFKIFSDNLAVKIGSEYFYKNKKIT 563 +++ L+++ + DNL K+ N +++ Sbjct: 466 NQQMLQQL--SLVMDNLINKLDLNQVVPNNEVS 496
>gi|4493894|emb|CAB39003| (AL034558) predicted using hexExon; MAL3P2.16 (PF0235w), Hypothetical protein, len: 1214 aa [Plasmodium falciparum] Length = 1213 Score = 38.3 bits (87), Expect = 0.057 Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 34/195 (17%) Query: 84 YVEDEKSEVISKLRIIIEYLENDNKDKF----------------CEDRKIKKKRIEDVLK 215 + D+ ++++ ++ + +EN K+K E+ KIK K E+ +K Sbjct: 541 HTNDDVTKLLDEINDLKNTIENMKKEKINLLSKFKAYTLNNKKELEELKIKCKNKEEQIK 600 Query: 216 LSFQLIKIKESIDLRKTSEVK-----------RINNEEDEINTHKNTIEIDDTKEETKTN 362 + ++ KE + +E++ +++N+E+EI + N EI + +EE Sbjct: 601 MYENKLQNKEDEIMNYVNEIQNKDKKIESYHIKLHNKEEEIMNYVN--EIQNKEEEI--- 655 Query: 363 IKTSDLTLXXXXXXXXXXXXXXXXTFKDIKYKIEDE-EYLRKILFKIFSDNLAVKIGSEY 539 IK + K+ K+E E L + KI +N +KI E Sbjct: 656 IKYVNELQNSDVQKEKKELKTINEVLKNTNEKLEKEITSLLGEMKKIEEENKVLKIFKEE 715 Query: 540 FYK--NKKIT-FSNDFITTEKYIVFEHLITSNK---KTIVQNVTVIEES 668 K N+K+T D I + + F+ ++ NK K +V + ++EE+ Sbjct: 716 KNKINNEKVTQIKGDDINDDNDMKFKQILLDNKTFNKLLVNELNIVEEN 764 Score = 33.2 bits (74), Expect = 1.9 Identities = 51/176 (28%), Positives = 87/176 (48%), Gaps = 41/176 (23%) Query: 156 KDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKT-----------SEVKRINNE--- 293 K+K + I KK ED+ K ++ K K + + +T +E+K +NN Sbjct: 825 KNKQMNELYILKKEKEDIYK-EYEEYKKKVTSLINETNYNYKNIEEKENEIKELNNTLNK 883 Query: 294 -EDEINTHKNTI----------EIDDTKEET---KTNIKTSDLTLXXXXXXXXXXXXXXX 431 ++E+N +K I EI+ KE+ + N+ SDL Sbjct: 884 YKEEMNNYKEEIIVINEKYKLLEIELCKEKNIRDQQNVGISDLKKKMLKEKIELEKKYKE 943 Query: 432 XTFKDIKYKIEDEEYLRKILFKIFSDNLAVKIGSEYFYKNKKITFSND-----------F 578 K+ + KI D + + KI D + + +K +K+TFSND + Sbjct: 944 QYEKETQQKINDMKIIFDNKEKILQDQI-----DDLLHKIEKLTFSNDEKTKTIENLQIY 998 Query: 579 ITTEKYIVFEHLITSN-KKTIVQN-VTVIEESWFEYI 683 + + I+ + I N KK I+ N + E+ YI Sbjct: 999 MDNDDNIMNQEGIQKNEKKQIIDNPINTDEKDLLNYI 1035
>gi|4100186|gb|AAD00774| (U95159) gelsolin-related protein GRP125 [Dictyostelium discoideum] Length = 1087 Score = 36.0 bits (81), Expect = 0.29 Identities = 26/100 (26%), Positives = 53/100 (53%) Query: 81 KYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLR 260 K VE+ K EV E ++ + K++ ++ ++K++ +++V K + +IKE ++ Sbjct: 748 KIVEEVKEEVKE------EDVKEEVKEEEVKEEEVKEEEVKEVAKEETKE-EIKEEVNDE 800 Query: 261 KTSEVKRINNEEDEINTHKNTIEIDDTKEETKTNIKTSDL 380 T EVK +N E+E+ ++ KEE K +K ++ Sbjct: 801 AT-EVKEVNQVEEEVKE-------EEVKEEVKVEVKEEEV 832 Score = 35.2 bits (79), Expect = 0.49 Identities = 24/91 (26%), Positives = 50/91 (54%) Query: 90 EDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTS 269 E+ K EV K+ + E ++ + K++ ++ ++K++ +++ +K + ++KE + K Sbjct: 817 EEVKEEV--KVEVKEEEVKGEAKEEEVKEEEVKEEEVKEEVKEVKE--EVKEEVKQDKEE 872 Query: 270 EVKRINNEEDEINTHKNTIEIDDTKEETKTN 362 EV NEE + T + + DD KE+ K N Sbjct: 873 EV----NEEIKEETKEEETKEDDNKEDEKVN 899 Score = 31.3 bits (69), Expect = 7.3 Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 7/100 (7%) Query: 69 DYKRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIK--IK 242 D K + E+E E K + E + + K++ E+ + +++V ++ ++ + +K Sbjct: 761 DVKEEVKEEEVKEEEVKEEEVKEVAKEETKEEIKEEVNDEATEVKEVNQVEEEVKEEEVK 820 Query: 243 ESIDLR-KTSEVKRINNEED----EINTHKNTIEIDDTKEETKTNIK 368 E + + K EVK EE+ E+ + E+ + KEE K +K Sbjct: 821 EEVKVEVKEEEVKGEAKEEEVKEEEVKEEEVKEEVKEVKEEVKEEVK 867
>gi|1075988|pir||S49429 hypothetical protein - Lactobacillus helveticus >gi|558221|emb|CAA57505| (X81981) orf [Lactobacillus helveticus] Length = 192 Score = 34.8 bits (78), Expect = 0.64 Identities = 23/102 (22%), Positives = 60/102 (58%), Gaps = 3/102 (2%) Query: 69 DYKRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKES 248 D K+K +E ++I +L+ +++NK+K E +I K+ E++ +L+ ++ K + Sbjct: 66 DSKKKEDNEELLQMIEQLKAENSKFKSENKEKDEELVRINLKKDEEIRRLNSKIEKYAD- 124 Query: 249 IDLRKTSEVK-RINNEEDEINTH--KNTIEIDDTKEETKTNIKTS 374 D ++ ++ + ++NN++ ++ + T ++ DT++ T+ + S Sbjct: 125 -DFKEFNDKQLQLNNQQQQLQARILEQTKQLKDTQQRLLTSAEKS 168
>gi|1708315|sp|P15108|HS83_YEAST HEAT SHOCK COGNATE PROTEIN HSC82 >gi|1077176|pir||S55133 heat shock protein HSP82 - yeast (Saccharomyces cerevisiae) >gi|854456|emb|CAA89919| (Z49808) Hsc82p [Saccharomyces cerevisiae] Length = 705 Score = 33.6 bits (75), Expect = 1.4 Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%) Query: 93 DEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQLIKIKE-SIDLRK 263 DE +E I + ++ +L++D + + E+++IK+ KR + + QL+ KE ++ Sbjct: 161 DEVNERIGRGTVLRLFLKDDQLE-YLEEKRIKEVIKRHSEFVAYPIQLLVTKEVEKEVPI 219 Query: 264 TSEVKRINNEEDEINTHKNTIEIDDTKEETKTNIK 368 E K+ ++DE + E+D+ +EE K K Sbjct: 220 PEEEKKDEEKKDEDDKKPKLEEVDEEEEEKKPKTK 254
>gi|171723 (M26044) hsc82 protein [Saccharomyces cerevisiae] Length = 705 Score = 33.6 bits (75), Expect = 1.4 Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 3/92 (3%) Query: 93 DEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQLIKIKE-SIDLRK 263 DE +E I + ++ +L++D + + E+++IK+ KR + + QL+ KE ++ Sbjct: 161 DEVNERIGRGTVLRLFLKDDQLE-YLEEKRIKEVIKRHSEFVAYPIQLLVTKEVEKEVPI 219 Query: 264 TSEVKRINNEEDEINTHKNTIEIDDTKEETKTNIK 368 E K+ ++DE + E+D+ +EE K K Sbjct: 220 PEEEKKDEEKKDEDDKKPKLEEVDEEEEEKKPKTK 254
>gi|113005|sp|P22620|ABRA_PLAFC 101 KD MALARIA ANTIGEN (P101) (ACIDIC BASIC REPEAT ANTIGEN) >gi|102315|pir||A29232 101K malaria antigen precursor - Plasmodium falciparum (strain Camp) >gi|160047 (J03902) p101/acidic basic repeat antigen [Plasmodium falciparum] Length = 743 Score = 33.6 bits (75), Expect = 1.4 Identities = 22/97 (22%), Positives = 48/97 (48%), Gaps = 9/97 (9%) Query: 72 YKRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESI 251 YK K + K+ ++ E ++ K++ + +K + ++I +K Sbjct: 146 YKNKSYNPLLLSCVKKMNMLKENVDYIQKNQNLFKELMNQKATYSFVNTKKKIISLKSQG 205 Query: 252 DLRKTSEVKRINNE---------EDEINTHKNTIEIDDTKEETKTN 362 ++TS+ + NN+ ED++N ++T + +DT +E TN Sbjct: 206 HKKETSQNQNENNDNQKYQEVNDEDDVNDEEDTNDDEDTNDEEDTN 251
>gi|113007|sp|P23745|ABRA_PLAFG 101 KD MALARIA ANTIGEN (P101) (ACIDIC BASIC REPEAT ANTIGEN) Length = 600 Score = 33.6 bits (75), Expect = 1.4 Identities = 22/97 (22%), Positives = 48/97 (48%), Gaps = 9/97 (9%) Query: 72 YKRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESI 251 YK K + K+ ++ E ++ K++ + +K + ++I +K Sbjct: 63 YKNKSYNPLLLSCVKKMNMLKENVDYIQKNQNLFKELMNQKATYSFVNTKKKIISLKSQG 122 Query: 252 DLRKTSEVKRINNE---------EDEINTHKNTIEIDDTKEETKTN 362 ++TS+ + NN+ ED++N ++T + +DT +E TN Sbjct: 123 HKKETSQNQNENNDNQKYQEVNDEDDVNDEEDTNDDEDTNDEEDTN 168
>gi|539218|pir||S38038 hypothetical protein YKL201c - yeast (Saccharomyces cerevisiae) Length = 539 Score = 33.2 bits (74), Expect = 1.9 Identities = 29/101 (28%), Positives = 52/101 (50%), Gaps = 4/101 (3%) Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESID 254 K+K E+EK + + + + E + K K E+ K KKK E+ K + K KE + Sbjct: 411 KKKKEEEEKKKKEEEEK---KKKEEEEKKKKEEEEK-KKKEEEEKKKQEEEEKKKKEEEE 466 Query: 255 LRKTSEVKRINNEEDE----INTHKNTIEIDDTKEETKTNIKTSD 377 +K E +++ NE++E + K E ++ K++ + N K D Sbjct: 467 KKKQEEGEKMKNEDEENKKNEDEEKKKNEEEEKKKQEEKNKKNED 511 Score = 31.7 bits (70), Expect = 5.6 Identities = 28/96 (29%), Positives = 44/96 (45%) Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESID 254 +RK E +K E K + E + K K E+ K KKK E+ K + K KE + Sbjct: 397 ERKRREKKKKEEEEKKK-----KEEEEKKKKEEEEK-KKKEEEEKKKKEEEEKKKKEEEE 450 Query: 255 LRKTSEVKRINNEEDEINTHKNTIEIDDTKEETKTN 362 +K E ++ EE+E + ++ + EE K N Sbjct: 451 KKKQEEEEKKKKEEEEKKKQEEGEKMKNEDEENKKN 486
>gi|2980817|emb|CAA82046| (Z28201) ORF YKL201c [Saccharomyces cerevisiae] Length = 660 Score = 33.2 bits (74), Expect = 1.9 Identities = 29/101 (28%), Positives = 52/101 (50%), Gaps = 4/101 (3%) Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESID 254 K+K E+EK + + + + E + K K E+ K KKK E+ K + K KE + Sbjct: 532 KKKKEEEEKKKKEEEEK---KKKEEEEKKKKEEEEK-KKKEEEEKKKQEEEEKKKKEEEE 587 Query: 255 LRKTSEVKRINNEEDE----INTHKNTIEIDDTKEETKTNIKTSD 377 +K E +++ NE++E + K E ++ K++ + N K D Sbjct: 588 KKKQEEGEKMKNEDEENKKNEDEEKKKNEEEEKKKQEEKNKKNED 632 Score = 31.7 bits (70), Expect = 5.6 Identities = 28/96 (29%), Positives = 44/96 (45%) Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESID 254 +RK E +K E K + E + K K E+ K KKK E+ K + K KE + Sbjct: 518 ERKRREKKKKEEEEKKK-----KEEEEKKKKEEEEK-KKKEEEEKKKKEEEEKKKKEEEE 571 Query: 255 LRKTSEVKRINNEEDEINTHKNTIEIDDTKEETKTN 362 +K E ++ EE+E + ++ + EE K N Sbjct: 572 KKKQEEEEKKKKEEEEKKKQEEGEKMKNEDEENKKN 607
>gi|2746308 (AF037218) unknown [Human herpesvirus 7] Length = 506 Score = 33.2 bits (74), Expect = 1.9 Identities = 24/93 (25%), Positives = 48/93 (50%), Gaps = 2/93 (2%) Query: 72 YKRKYVEDEKSEVISKLRIIIEYLENDNKDKFCED--RKIKKKRIEDVLKLSFQLIKIKE 245 +++++ E +K + K + + + + ++ K ED +K +KKR++D K Q + E Sbjct: 145 FEKEHAERKKQDDDYKKKALKQKDKRRSEQKILEDCDKKDEKKRMDDTEKRKLQEDRRNE 204 Query: 246 SIDLRKTSEVKRINNEEDEINTHKNTIEIDDTKEE 350 DL+K + ED+ K +E D +KE+ Sbjct: 205 KQDLKKRVDDTEKRKLEDDRRNEKQDLE-DASKEK 238
>gi|3043712|dbj|BAA25520| (AB011166) KIAA0594 protein [Homo sapiens] Length = 882 Score = 33.2 bits (74), Expect = 1.9 Identities = 28/104 (26%), Positives = 57/104 (53%), Gaps = 18/104 (17%) Query: 75 KRKYVEDEKSEVISKLRII-------------IEYLENDNKDKFCE--DRKIKKKRIEDV 209 +R+++E++ E+ KL+ + +E+ +N+ + K E +RK KK+++E Sbjct: 432 QRRHLEEQLKEIHRKLQAVDSGLIALRETSKHLEHKDNELRQKKKELLERKTKKRQLEQK 491 Query: 210 LKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTIEIDDT---KEETKTNIKTSDL 380 + +K+ E E ++ + + EIN K + + T K T +I+ DL Sbjct: 492 ISSKLGSLKLMEQDTCNLEEEERKASTKIKEINVQKAKLVTELTNLIKICTSLHIQKVDL 551 Query: 381 TL 386 L Sbjct: 552 IL 553
>gi|3915759|sp|P36044|MNN4_YEAST MNN4 PROTEIN >gi|1752736|dbj|BAA11676| (D83006) gene required for phosphoylation of oligosaccharides/ has high homology with YJR061w [Saccharomyces cerevisiae] Length = 1178 Score = 33.2 bits (74), Expect = 1.9 Identities = 29/101 (28%), Positives = 52/101 (50%), Gaps = 4/101 (3%) Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESID 254 K+K E+EK + + + + E + K K E+ K KKK E+ K + K KE + Sbjct: 1050 KKKKEEEEKKKKEEEEK---KKKEEEEKKKKEEEEK-KKKEEEEKKKQEEEEKKKKEEEE 1105 Query: 255 LRKTSEVKRINNEEDE----INTHKNTIEIDDTKEETKTNIKTSD 377 +K E +++ NE++E + K E ++ K++ + N K D Sbjct: 1106 KKKQEEGEKMKNEDEENKKNEDEEKKKNEEEEKKKQEEKNKKNED 1150 Score = 31.7 bits (70), Expect = 5.6 Identities = 28/96 (29%), Positives = 44/96 (45%) Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESID 254 +RK E +K E K + E + K K E+ K KKK E+ K + K KE + Sbjct: 1036 ERKRREKKKKEEEEKKK-----KEEEEKKKKEEEEK-KKKEEEEKKKKEEEEKKKKEEEE 1089 Query: 255 LRKTSEVKRINNEEDEINTHKNTIEIDDTKEETKTN 362 +K E ++ EE+E + ++ + EE K N Sbjct: 1090 KKKQEEEEKKKKEEEEKKKQEEGEKMKNEDEENKKN 1125
>gi|3649763|emb|CAB11112| (Z98547) predicted using hexExon; MAL3P3.12 (PFC0385c), Serine/threonine protein kinase, len: 1640 aa; Similarity to serine/threonine protein kinases. M.musculus serine/threonine protein kinase AIE1 (TR:O88445) BLAST Score: 5... Length = 1639 Score = 32.8 bits (73), Expect = 2.5 Identities = 41/189 (21%), Positives = 77/189 (40%), Gaps = 5/189 (2%) Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESID 254 K+ Y + EK + K +++ DN +D K +I D ++ K K ++ Sbjct: 922 KKNYKDKEKISTLEKK----VFVKKDNVITNNDDEKHTSSKINDDFNITID--KQKGKLN 975 Query: 255 LRKTSEVKRINNEEDEINTHKNTI-EIDDTKEETKTNIKTSDLTLXXXXXXXXXXXXXXX 431 ++I NE + K+ + +I + + KTN T++ + Sbjct: 976 NNPVDLNRKIKNETKILEKDKSHMSKIQNNLMKKKTNFPTNNKGISSTSISSSSTK---- 1031 Query: 432 XTFKDIKYKIEDEEYLRKILFKIFSDNL---AVKIGSEY-FYKNKKITFSNDFITTEKYI 599 FKD IE + L + + + + ++K+ + YK+KK T ND K + Sbjct: 1032 -NFKDCGI-IEKNKNLSNLKYTCIRNKMNVDSIKLNDKADLYKDKKKTSFNDINRAAKGM 1089 Query: 600 VFEHLITSNKKTIV 641 F+ NK +V Sbjct: 1090 NFKKRDVPNKNNMV 1103
>gi|3878436|emb|CAB04590| (Z81568) predicted using Genefinder [Caenorhabditis elegans] Length = 276 Score = 32.8 bits (73), Expect = 2.5 Identities = 23/75 (30%), Positives = 40/75 (52%) Query: 132 IEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINT 311 +E + ++K E++ KKK ++ K + K E + +KT+E K NNE+ + N Sbjct: 66 VEKKKEKGEEKEEEEKGEKKKEDKEEKKDDSKEDKKDEDHEKKKTAEEKE-NNEKKDENK 124 Query: 312 HKNTIEIDDTKEETK 356 +KN E D K++ K Sbjct: 125 NKNKDERKDEKKDEK 139
>gi|3845272 (AE001417) hypothetical protein [Plasmodium falciparum] Length = 980 Score = 32.8 bits (73), Expect = 2.5 Identities = 21/78 (26%), Positives = 42/78 (52%), Gaps = 5/78 (6%) Query: 144 ENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINT---- 311 E ++K K ED ++KK+ + LK IK K + T+E+ ++N+ +E+N Sbjct: 382 EKEDKIKNLEDDLLEKKKCIENLKDELINIKKKMEDKMHMTNEMDLLSNKVEELNRINKT 441 Query: 312 -HKNTIEIDDTKEETKTNIKTSD 377 KN +E+++ + K + + Sbjct: 442 YEKNIVELNNELDVIKKKLNDEE 464
>gi|731046|sp|P40818|UBPY_HUMAN PROBABLE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE (UBIQUITIN THIOLESTERASE) (UBIQUITIN-SPECIFIC PROCESSING PROTEASE) (DEUBIQUITINATING ENZYME) (KIAA0055) >gi|473945|dbj|BAA06225| (D29956) This gene is similar to tre oncogene(X63547). [Homo sapiens] Length = 1118 Score = 32.8 bits (73), Expect = 2.5 Identities = 23/94 (24%), Positives = 51/94 (53%) Query: 96 EKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEV 275 EK++ +LR + + + K +++K KKK+ + +++ + K KE ++ +++ + Sbjct: 474 EKNKQEKELRERQQEEQKEKLRKEEQEQKAKKKQEAEENEITEKQQKAKEEMEKKESEQA 533 Query: 276 KRINNEEDEINTHKNTIEIDDTKEETKTNIKTSD 377 K+ ED+ + K EI K ++K+ +TSD Sbjct: 534 KK----EDKETSAKRGKEITGVKRQSKSEHETSD 563
>gi|4467113|emb|CAB37547| (AL035538) hypothetical protein [Arabidopsis thaliana] Length = 1496 Score = 32.5 bits (72), Expect = 3.3 Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 1/99 (1%) Query: 69 DYKRKYVEDEKSEVISKLRII-IEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKE 245 +YK E EK V+ + +I +E N+N + C I ++ + ++ + L++ E Sbjct: 594 EYKEMLEESEKCRVLLEEQISQLESDSNENIRELCSKVDIAYAKLAEEVEKTASLVRKSE 653 Query: 246 SIDLRKTSEVKRINNEEDEINTHKNTIEIDDTKEETKTNI 365 SIDL + + + E++ +K +E E TKT + Sbjct: 654 SIDLNE-------EHRQRELDHYKEMLE-----ESTKTQL 681
>gi|3462840 (AF083875) M protein [Streptococcus pyogenes] Length = 194 Score = 32.5 bits (72), Expect = 3.3 Identities = 14/53 (26%), Positives = 31/53 (58%) Query: 189 KKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTIEIDDTKE 347 +K+ +++ L+ + K+K+ ++L + + +++EE E+N KN D KE Sbjct: 72 QKKEQELKNLNDNVKKLKDEVELERLKNERHVHDEEAELNRLKNERHDHDKKE 124
>gi|2981486 (AF053464) M protein [Streptococcus pyogenes] Length = 154 Score = 32.5 bits (72), Expect = 3.3 Identities = 20/71 (28%), Positives = 39/71 (54%) Query: 135 EYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTH 314 + L+++NK D + K++ +ED L + K+K++ +L + + +++EE E+N Sbjct: 55 DQLKSENKG-LKTDLQEKERELED---LKGDVEKLKDAAELERLKNERHVHDEEAELNRL 110 Query: 315 KNTIEIDDTKE 347 KN D KE Sbjct: 111 KNERHDHDKKE 121
>gi|3426021|dbj|BAA32395| (AB016836) heat shock 70 kD protein cognate [Bombyx mori] Length = 658 Score = 32.5 bits (72), Expect = 3.3 Identities = 17/45 (37%), Positives = 30/45 (65%) Query: 81 KYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLK 215 K +D+K+++ L I++LE DN+D E+ K +KK +EDV++ Sbjct: 587 KVTDDDKAKMEEALDAAIKWLE-DNQDAESEEYKKQKKTLEDVVQ 630
>gi|3328231 (AF051784) 14S cohesin SMC1 subunit; SMC protein [Xenopus laevis] Length = 1232 Score = 32.5 bits (72), Expect = 3.3 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 3/87 (3%) Query: 99 KSEVISKLRIIIEYLENDNKDKFCEDRKI---KKKRIEDVLKLSFQLIKIKESIDLRKTS 269 K E + + + LE N+D+ + ++ ++K++E K+ +L +++E+ Sbjct: 379 KEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKLRELEEN------- 431 Query: 270 EVKRINNEEDEINTHKNTIEIDDTKEETKT 359 KRI E+ I T K ++E EET T Sbjct: 432 -QKRIEKLEEYIATSKQSLEEQKNLEETLT 460
>gi|2496852|sp|Q11102|YL17_CAEEL HYPOTHETICAL 131.5 KD PROTEIN C02F12.7 IN CHROMOSOME X >gi|1109896 (U41545) coded for by C. elegans cDNA yk4b2.5; coded for by C. elegans cDNA CEESN67F; coded for by C. elegans cDNA yk94h12.5; coded for by C. elegans cDNA CEESD93F; coded for by C. elegans cDNA CEESG57F; coded for by C. elegans cDNA yk4b2.3;... Length = 1130 Score = 32.5 bits (72), Expect = 3.3 Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 8/88 (9%) Query: 96 EKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESI-------- 251 EKS + +++R++ + +E++ +D E K +ED +L+ L + +E I Sbjct: 539 EKSILAAEIRVLTQKIEDEEQDDITEQLA---KIVEDTSQLTRTLEEYRERITGKDAEIL 595 Query: 252 DLRKTSEVKRINNEEDEINTHKNTIEIDDTKEETKT 359 +LRK E + + E+ H+NT + + +ET T Sbjct: 596 NLRKQLEKEISHTEDRNRLLHENTQKELEAHKETHT 631
>gi|2127671|pir||S70793 vsaE2 protein - Mycoplasma pulmonis (SGC3) (fragment) >gi|780768 (U23947) VsaE2 lipoprotein [Mycoplasma pulmonis] >gi|1586796|prf||2204375D vsaE2 gene [Mycoplasma pulmonis] Length = 309 Score = 32.1 bits (71), Expect = 4.3 Identities = 23/85 (27%), Positives = 41/85 (48%) Query: 90 EDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTS 269 ED+K V +K+ L + +DKF + K ++ED+ K ++ KE+I+ + Sbjct: 229 EDQKKSVFTKIE-----LTKEQEDKFKNVIQDAKVKLEDLTKKLEKIKSEKENIEKKLDP 283 Query: 270 EVKRINNEEDEINTHKNTIEIDDTK 344 +K + +IN E+D TK Sbjct: 284 IIKELKERLKKIN------ELDSTK 302
>gi|2127670|pir||S70797 vsaE1 protein - Mycoplasma pulmonis (SGC3) (fragment) >gi|780772 (U23947) VsaE1 protein [Mycoplasma pulmonis] >gi|1586800|prf||2204375H vsaE1 gene [Mycoplasma pulmonis] Length = 237 Score = 32.1 bits (71), Expect = 4.3 Identities = 23/85 (27%), Positives = 41/85 (48%) Query: 90 EDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTS 269 ED+K V +K+ L + +DKF + K ++ED+ K ++ KE+I+ + Sbjct: 157 EDQKKSVFTKIE-----LTKEQEDKFKNVIQDAKVKLEDLTKKLEKIKSEKENIEKKLDP 211 Query: 270 EVKRINNEEDEINTHKNTIEIDDTK 344 +K + +IN E+D TK Sbjct: 212 IIKELKERLKKIN------ELDSTK 230
>gi|2507061|sp|P32489|MEI5_YEAST MEIOSIS PROTEIN 5 >gi|2132336|pir||S62001 MEI5 protein - yeast (Saccharomyces cerevisiae) >gi|1163093 (U43503) Mei5p,Lph6p [Saccharomyces cerevisiae] Length = 222 Score = 32.1 bits (71), Expect = 4.3 Identities = 37/117 (31%), Positives = 59/117 (49%), Gaps = 16/117 (13%) Query: 12 LKNTPNILFLLCAVLDCXXDYKRKYVEDEKSEVISKLRIIIE----YLENDN-------- 155 L+ N L C +L + K +E+ KS I K R I E ++ N Sbjct: 68 LRQENNHLQQACKILS-----ENKIIENRKS--IEKWRTICEMELSFILNSTLIKINRMG 120 Query: 156 --KDKFCEDRKIKKKRIEDVLK--LSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNT 323 KD ++ + KK+R+E + + Q+ +IKES D R+ SEV++ E ++N Sbjct: 121 GYKDFLEKEMEAKKRRLEYQIDNGMEDQICEIKESDDFRQLSEVEK-QEWESQMNEQLKE 179 Query: 324 IEIDDTKEETKTN 362 +E E K N Sbjct: 180 LEKKKIAELEKLN 192
>gi|2213862 (AF003086) PfSNF2L [Plasmodium falciparum] Length = 1422 Score = 32.1 bits (71), Expect = 4.3 Identities = 17/46 (36%), Positives = 31/46 (66%), Gaps = 1/46 (2%) Query: 234 KIKESIDLRKTSEVKRINNEEDEINTHK-NTIEIDDTKEETKTNIKT 371 ++ +++ RK +E+ NNEEDE K +++E++D KE+ TN+ T Sbjct: 131 QMNDNMKKRKLNEISYDNNEEDEFRNKKDDSMEMND-KEKGSTNMST 176
>gi|83995|pir||C26696 hypothetical protein (CYb-COII intergenic region) - Sauroleishmania tarentolae mitochondrion (SGC6) Length = 211 Score = 32.1 bits (71), Expect = 4.3 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 7/72 (9%) Query: 691 FI*MYSNQLSS-------ITVTF*TIVFLLLVIKCSKTIYFSVVIKSLLKVIFLFL*KYS 533 F+ M+ N LSS + I+F L I C IYF + ++L I +L Y+ Sbjct: 122 FLRMFCNLLSSHFLMLMFCDFVYFFIIFFLFFIMCD-FIYFIIFTFAMLFCIIFYLFLYA 180 Query: 532 LPIFTAKLSLKILNNIFLR 476 L +F A L + I N+ ++ Sbjct: 181 LDMFCALLQIFIFCNMIMQ 199
>gi|348317|pir||A45612 ATPase 6 - Sauroleishmania tarentolae >gi|340586 (M33229) ATPase 6 [Leishmania tarentolae] >gi|340615 (L07543) MURF4 [Leishmania tarentolae] Length = 232 Score = 32.1 bits (71), Expect = 4.3 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 7/72 (9%) Query: 691 FI*MYSNQLSS-------ITVTF*TIVFLLLVIKCSKTIYFSVVIKSLLKVIFLFL*KYS 533 F+ M+ N LSS + I+F L I C IYF + ++L I +L Y+ Sbjct: 143 FLRMFCNLLSSHFLMLMFCDFVYFFIIFFLFFIMCD-FIYFIIFTFAMLFCIIFYLFLYA 201 Query: 532 LPIFTAKLSLKILNNIFLR 476 L +F A L + I N+ ++ Sbjct: 202 LDMFCALLQIFIFCNMIMQ 220
>gi|2127600|pir||JC6009 surface-located membrane protein lmp3 - Mycoplasma hominis (SGC3) >gi|1197336|emb|CAA64858| (X95601) Lmp3 protein [Mycoplasma hominis] Length = 1302 Score = 32.1 bits (71), Expect = 4.3 Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 6/119 (5%) Query: 9 NLKNTPNILFLLCAVLDCXXDYKRKYVEDEKSEVISKLRIIIEYLENDN--KDKFCEDRK 182 ++KN PN L+ + + D K KSE+I+ + + L+ KD+ E K Sbjct: 581 DVKNNPNYATLVKDLTNAKDDKKSVTKSSNKSEIIAANDELKQALDKAKVAKDQIDEANK 640 Query: 183 IKKKRIEDVL----KLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTIEIDDTKEE 350 K+++ D + +L +L+ + I KT + I + E+N + N + KE Sbjct: 641 SIKEQLSDSITNANQLLNKLVDSDKDIQKAKTELSQEIQSASQELNLN-NPTSMQSAKES 699 Query: 351 TKTNI 365 + Sbjct: 700 LDAKV 704 Score = 31.7 bits (70), Expect = 5.6 Identities = 28/111 (25%), Positives = 59/111 (52%), Gaps = 14/111 (12%) Query: 12 LKNTPNILFLLCAVLDCXXDYKRKYVEDEKSEVISKLRIIIEYLENDN--KDKFCEDRKI 185 +KN PN L+ + + K KS++I+ +I+ L + N KD+ E K Sbjct: 424 VKNNPNYATLVKDLTNAKDAKKSVTNSSNKSDIIAANEALIQALADANKAKDQVDEANKS 483 Query: 186 KKKRIEDVLKLS-----------FQLIKIKESIDLRKTSEVKRIN-NEEDEINTHKNTIE 329 K+++ ++ + +++K KES++ T+ K +N N+ + + K++++ Sbjct: 484 IKEQLNALIDKANTLLPQLNDNDSEIVKAKESLNAEITNANKAVNQNDNASMQSAKSSLD 543 Query: 330 IDDTK 344 TK Sbjct: 544 DKVTK 548 Score = 31.3 bits (69), Expect = 7.3 Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 16/93 (17%) Query: 96 EKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIK---ESIDLRKT 266 E+ ++KLR+ ++ L N N + + KK E+ + S + KIK E+++ K Sbjct: 108 EELNKLNKLRLDLQNLINSNDGQNVDSSDAKKALNENQIDDSLPIDKIKKTNENLENAKK 167 Query: 267 SEVKRINNE--------EDEINTHKNTIEIDDTKE-----ETKTNIKTS 374 + +IN E ++ K ++++DTKE E K I+T+ Sbjct: 168 ELLNKINAERELQSKIFNEKKQELKRVLDLEDTKEVDFTKEQKVFIETN 216
>gi|3758862|emb|CAB11147| (Z98551) predicted using hexExon; MAL3P6.4 (PFC0715c), Hypothetical protein, len: 1009 aa [Plasmodium falciparum] Length = 1008 Score = 31.7 bits (70), Expect = 5.6 Identities = 27/135 (20%), Positives = 60/135 (44%), Gaps = 11/135 (8%) Query: 132 IEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINT 311 I+ E +++ +D + K K+ E+++ +S K + KR+N + ++N Sbjct: 310 IQRREKKKQEEEKKDEEEKNKKKEELINISDNEKDTKHN---ETNINYKRVNVNDKDVNI 366 Query: 312 HKNTIEIDDTKEETKTNIKTSDLTLXXXXXXXXXXXXXXXXTFKDIK-----------YK 458 H++ I+ KE+T I++ + TF K K Sbjct: 367 HEDIIKGKKAKEKTDDEIQSEIIEKDISTNYSKDRNVQYLNTFSFDKNNEKLNSEMESLK 426 Query: 459 IEDEEYLRKILFKIFSDNLAVKIGSE 536 + +++ L K F ++ N+ ++ +E Sbjct: 427 LYNKKNLSKYFFSLYKGNILKQLVTE 452
>gi|76319|pir||QQSA8T hypothetical protein B-189 - Staphylococcus aureus plasmid pT181 Length = 189 Score = 31.7 bits (70), Expect = 5.6 Identities = 29/87 (33%), Positives = 48/87 (54%), Gaps = 11/87 (12%) Query: 48 AVLDCXXDYKR----KYVEDEKSEVISK---LRIIIEYLEN--DNKDKFCEDRKIKKKRI 200 A D DY+ + ++D+ E+ K L +E +EN DN ++ E+ K K+ I Sbjct: 56 AAQDISEDYEYIKSGRALDDKDKEIREKDDLLNKAVERIENADDNFNQLYENAKPLKENI 115 Query: 201 EDVLKLSFQLIKIKESIDLRKT--SEVKRINNEEDEIN 308 E LKL L+K E + R T V ++ +E ++N Sbjct: 116 EIALKLLKILLKELERVLGRNTFAGRVSKLTEDEPKLN 153
>gi|3845304 (AE001423) replication factor C, 140 kDa subunit (ATPase) [Plasmodium falciparum] Length = 904 Score = 31.7 bits (70), Expect = 5.6 Identities = 25/91 (27%), Positives = 43/91 (46%) Query: 90 EDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTS 269 EDEK V++ L L+NDNK ED K ++ + K ++ + S Sbjct: 120 EDEKL-VVNNLNDYFNILQNDNK-VTKEDTKSNNVSPKNEIN--------KSNVKRERES 169 Query: 270 EVKRINNEEDEINTHKNTIEIDDTKEETKTN 362 E I++E D +++ KN + K++T+ N Sbjct: 170 EQYEISSENDTVSSKKNVLISPAKKQKTQNN 200
>gi|1722830|sp|P52531|VU79_HSV7J PROTEIN U79 >gi|1139680 (U43400) similar to U79 of HHV6, GenBank Accession Number X83413 at the N-terminus [Human herpesvirus 7] Length = 233 Score = 31.7 bits (70), Expect = 5.6 Identities = 21/86 (24%), Positives = 43/86 (49%), Gaps = 2/86 (2%) Query: 72 YKRKYVEDEKSEVISKLRIIIEYLENDNKDKFCED--RKIKKKRIEDVLKLSFQLIKIKE 245 +++++ E +K + K + + + + ++ K ED +K +KKR++D K Q + E Sbjct: 145 FEKEHAERKKQDDDYKKKALKQKDKRRSEQKILEDCDKKDEKKRMDDTEKRKLQEDRRNE 204 Query: 246 SIDLRKTSEVKRINNEEDEINTHKNTIE 329 DL+K + ED+ K +E Sbjct: 205 KQDLKKRVDDTEKRKLEDDRRNEKQDLE 232
>gi|3845099 (AE001373) predicted secreted protein [Plasmodium falciparum] Length = 1192 Score = 31.7 bits (70), Expect = 5.6 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 8/97 (8%) Query: 69 DYKRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKES 248 D K KY ED+K + + E + DNK+K ED K K K ED + + K K+ Sbjct: 661 DDKEKYKEDDKEDDKEDDK---EKDKEDNKEKDKEDNKEKDK--EDDKEKDKEDDKEKDK 715 Query: 249 IDLR-KTSEVKRINNEEDEINTH-------KNTIEIDDTKEETKT 359 D + K E + ++ED+ H K ++ DD E KT Sbjct: 716 EDNKEKDKEDNKEKDKEDDKEKHDKHVRRIKKKMKDDDYDESLKT 760
>gi|4156029 (AE001563) TYPE III RESTRICTION ENZYME [Helicobacter pylori J99] Length = 969 Score = 31.7 bits (70), Expect = 5.6 Identities = 29/98 (29%), Positives = 56/98 (56%), Gaps = 6/98 (6%) Query: 81 KYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK---KRIEDV-LKLSFQLIKIKES 248 +++ ++V + + + LEN +++KF E +K ++ KR+E++ L++ +Q IK K S Sbjct: 741 EFISALSNKVKLSFKSVAKVLENIDENKFNEIKKNEQEGLKRLEELFLEIIYQNIKDKIS 800 Query: 249 IDLRKTSEVKRINNEEDEINTHKNTIE--IDDTKEETKTNIKTS 374 +R+T+ +K N + D K I +D + K IK S Sbjct: 801 YQMRETT-IK--NRKNDAFYDEKGEIREFLDGSLGADKYEIKNS 841
>gi|477226|pir||A48426 heat shock protein HSP82 - maize >gi|300083|bbs|130886 (S59780) HSP82=82 kda heat shock protein [Zea mays, seedling, leaves, Peptide, 715 aa] [Zea mays] Length = 715 Score = 31.7 bits (70), Expect = 5.6 Identities = 21/67 (31%), Positives = 38/67 (56%) Query: 81 KYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLR 260 K + D++ E +K + E D++DK +D+ KKK++++V Q+ K ++ I LR Sbjct: 227 KEISDDEEEEDNKKEEEGDVEEVDDEDKDTKDKSKKKKKVKEVSHEWVQINK-QKPIWLR 285 Query: 261 KTSEVKR 281 K E+ R Sbjct: 286 KPEEITR 292
>gi|729771|sp|Q08277|HS82_MAIZE HEAT SHOCK PROTEIN 82 Length = 715 Score = 31.7 bits (70), Expect = 5.6 Identities = 21/67 (31%), Positives = 38/67 (56%) Query: 81 KYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLR 260 K + D++ E +K + E D++DK +D+ KKK++++V Q+ K ++ I LR Sbjct: 227 KEISDDEEEEDNKKEEEGDVEEVDDEDKDTKDKSKKKKKVKEVSHEWVQINK-QKPIWLR 285 Query: 261 KTSEVKR 281 K E+ R Sbjct: 286 KPEEITR 292
>gi|1041785 (U36927) rhoptry protein [Plasmodium yoelii] Length = 2401 Score = 31.7 bits (70), Expect = 5.6 Identities = 44/195 (22%), Positives = 82/195 (41%), Gaps = 12/195 (6%) Query: 12 LKNTPNILFL--LCAVLDCXXDYKRKYVEDEK---SEVISKLRIIIEYLENDN------K 158 ++N NIL L + ++D +Y + ++ K +E+ + +II + EN + K Sbjct: 980 IENIYNILKLNKIKKIIDKVKEYTDEIEKNNKKINAELSNSEKIITQLKENSSLKECQSK 1039 Query: 159 DKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTIEIDD 338 K D + I+++ L ++ K +I+ + K ++ + N IE+ D Sbjct: 1040 IKSTIDDNYVSECIKNITNLKTYIVNEKNNIN----TYFKNAEEYNQNVSLNFNNIEMAD 1095 Query: 339 TKEETKTNIKTSDLT-LXXXXXXXXXXXXXXXXTFKDIKYKIEDEEYLRKILFKIFSDNL 515 TK + NIK ++ T +KD K E K LF+ + + Sbjct: 1096 TKSQYILNIKKNNGTNNTDYNIKELKEHKKKSNVYKDEAGKNTQEIKKNKELFEKYEQEV 1155 Query: 516 AVKIGSEYFYKNKKITFSNDFITTEKY 596 V + Y + N F T+ Y Sbjct: 1156 TVLLNKYY-----AVELKNKFDKTKNY 1177
>gi|2982196|gb|AAC06348| (AF007865) bacitracin synthetase 3; BacC [Bacillus licheniformis] Length = 6359 Score = 31.7 bits (70), Expect = 5.6 Identities = 23/84 (27%), Positives = 42/84 (49%), Gaps = 2/84 (2%) Query: 111 ISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINN 290 ISK + + +E D+K +F + K + E V +++ +++ E I R KR++ Sbjct: 1413 ISKFDLTLSAIEKDSKIEFDLEYCTKLFKRETVERMAAHFVRVLEDISKRTD---KRLDQ 1469 Query: 291 EEDEINTHKNTI--EIDDTKEETKTN 362 E KNT+ +DTK + T+ Sbjct: 1470 IEAMSEDEKNTLLYRFNDTKTDAPTD 1495
>gi|2496111|sp|Q58135|Y725_METJA HYPOTHETICAL PROTEIN MJ0725 >gi|2127830|pir||E64390 coenzyme F420 hydrogenase beta chain - Methanococcus jannaschii >gi|1591441 (U67519) coenzyme F420-reducing hydrogenase, beta subunit [Methanococcus jannaschii] Length = 261 Score = 31.7 bits (70), Expect = 5.6 Identities = 12/42 (28%), Positives = 29/42 (68%), Gaps = 2/42 (4%) Query: 183 IKKKRIEDVLKLSFQ--LIKIKESIDLRKTSEVKRINNEEDEIN 308 ++ K +ED++ + LI++KE++D++ +++ I + +EIN Sbjct: 205 VRNKMVEDIINEMAEKGLIEVKETVDIKAIEKLENIKKKNEEIN 248
>gi|1346789|sp|P03864|PRE3_STAAU PLASMID RECOMBINATION ENZYME (MOBILIZATION PROTEIN) >gi|151683 (J01764) Pre protein (plasmid recombination) [Plasmid pT181] Length = 413 Score = 31.7 bits (70), Expect = 5.6 Identities = 29/87 (33%), Positives = 48/87 (54%), Gaps = 11/87 (12%) Query: 48 AVLDCXXDYKR----KYVEDEKSEVISK---LRIIIEYLEN--DNKDKFCEDRKIKKKRI 200 A D DY+ + ++D+ E+ K L +E +EN DN ++ E+ K K+ I Sbjct: 280 AAQDISEDYEYIKSGRALDDKDKEIREKDDLLNKAVERIENADDNFNQLYENAKPLKENI 339 Query: 201 EDVLKLSFQLIKIKESIDLRKT--SEVKRINNEEDEIN 308 E LKL L+K E + R T V ++ +E ++N Sbjct: 340 EIALKLLKILLKELERVLGRNTFAERVNKLTEDEPKLN 377
>gi|1052999 (U38428) recombination protein [Staphylococcus aureus] Length = 413 Score = 31.7 bits (70), Expect = 5.6 Identities = 29/87 (33%), Positives = 48/87 (54%), Gaps = 11/87 (12%) Query: 48 AVLDCXXDYKR----KYVEDEKSEVISK---LRIIIEYLEN--DNKDKFCEDRKIKKKRI 200 A D DY+ + ++D+ E+ K L +E +EN DN ++ E+ K K+ I Sbjct: 280 AAQDISEDYEYIKSGRALDDKDKEIREKDDLLNKAVERIENADDNFNQLYENAKPLKENI 339 Query: 201 EDVLKLSFQLIKIKESIDLRKT--SEVKRINNEEDEIN 308 E LKL L+K E + R T V ++ +E ++N Sbjct: 340 EIALKLLKILLKELERVLGRNTFAERVNKLTEDEPKLN 377
>gi|2979546 (AC003680) unknown protein [Arabidopsis thaliana] Length = 205 Score = 31.7 bits (70), Expect = 5.6 Identities = 24/94 (25%), Positives = 37/94 (38%) Query: 96 EKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEV 275 EK E + K +++ E+D D E +K K+KR + DLR +E+ Sbjct: 59 EKKEKLKKAEVVVPATESDGDDSVVEKKKKKRKR--------------NQMTDLRFENEL 104 Query: 276 KRINNEEDEINTHKNTIEIDDTKEETKTNIKTSD 377 I+ K E K++ K KT D Sbjct: 105 AEIDGRSKRKERKKKYWE---AKKQKKNKGKTED 135
>gi|4176527|emb|CAA22883| (AL035263) hypothetical protein [Schizosaccharomyces pombe] Length = 675 Score = 31.3 bits (69), Expect = 7.3 Identities = 17/53 (32%), Positives = 29/53 (54%) Query: 210 LKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTIEIDDTKEETKTNIK 368 L + QL+K+K SID K K+ N+ + +N+++ E + EE NI+ Sbjct: 90 LSVQSQLLKVKNSIDSYKNEWSKKTNDAQILLNSYETFCEEEALIEEKLKNIE 142
>gi|3913894|sp|O67825|IF2_AQUAE TRANSLATION INITIATION FACTOR IF-2 >gi|2984268 (AE000769) initiation factor IF-2 [Aquifex aeolicus] Length = 805 Score = 31.3 bits (69), Expect = 7.3 Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 6/95 (6%) Query: 93 DEKSEVISKLRIIIEYLENDNK-----DKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDL 257 +EK E K +I+E + + K ++ E ++ ++K+ E+ K S + + IKE ++ Sbjct: 80 EEKKEEEKKEEVIVEEVVEEKKPEVIVEEIEEKKEEEEKKEEEKPKKSVEEL-IKEILEK 138 Query: 258 R-KTSEVKRINNEEDEINTHKNTIEIDDTKEETKTNIKTSD 377 + K E K++ E E ++ ++ KEE K K + Sbjct: 139 KEKEKEKKKVEKERKEEKVRVVEVKKEERKEEKKEEKKEEE 179
>gi|1771158|emb|CAA69181| (Y07861) MFP1 protein [Lycopersicon esculentum] Length = 697 Score = 31.3 bits (69), Expect = 7.3 Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 1/149 (0%) Query: 87 VEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKT 266 +++EK ++ L+ I+ L+ND + K KK++++ LK LI++ E T Sbjct: 203 LQNEK-KLAEDLKFEIKGLQND-----LMNTKEDKKKLQEELKEKLDLIQVLEEKITLLT 256 Query: 267 SEVKRINNEEDEINTHKNTIEIDDTKEETKTNIKTSDLTLXXXXXXXXXXXXXXXXTFKD 446 +E+K + E++ NT ++ + + E +L K+ Sbjct: 257 TEIK-----DKEVSLRSNTSKLAEKESEVN--------SLSDMYQQSQDQLMNLTSEIKE 303 Query: 447 IKYKIEDEEYLRKILFKIFS-DNLAVKIGS 533 +K +I+ E R++ K S DNL V++ S Sbjct: 304 LKDEIQKRE--RELELKCVSEDNLNVQLNS 331
>gi|3257342|dbj|BAA30025| (AP000004) 879aa long hypothetical purine NTPase [Pyrococcus horikoshii] Length = 879 Score = 31.3 bits (69), Expect = 7.3 Identities = 26/91 (28%), Positives = 59/91 (64%), Gaps = 35/91 (38%) Query: 78 RKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKK---------RIEDVLKLSFQL 230 R+ E+ K++++ K + + +E + ++ +R+++ + R+ + ++ Q+ Sbjct: 446 RELTEEHKADLLRKYSLELSSIEKEIQEAKALERQLRAEFRKVENELSRLSSLKTIADQI 505 Query: 231 IKIKESI------DLRKTSE---------------VKRINNEEDEINTHKN-----TIEI 332 I+I+E + DL++ E V+ + E +E+N +KN IEI Sbjct: 506 IEIRERLSKINLEDLKRDKEEYELLKSESNKLKGEVESLKKEVNELNDYKNESTKLEIEI 565 Query: 333 DDTKEE 350 D K+E Sbjct: 566 DKAKKE 571
>gi|133615|sp|P28976|RRPL_TSWV1 RNA-DIRECTED RNA POLYMERASE (L PROTEIN) >gi|67085|pir||RRVUTW RNA-directed RNA polymerase (EC 2.7.7.48) - tomato spotted wilt virus (strain BR-01) >gi|222681|dbj|BAA00955| (D10066) RNA polymerase [tomato spotted wilt virus] Length = 2875 Score = 31.3 bits (69), Expect = 7.3 Identities = 17/64 (26%), Positives = 33/64 (51%) Query: 168 CEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTIEIDDTKE 347 C+ K++K+ +ED + ++ IK++ +T + K N + + +KN + DT Sbjct: 536 CDTTKMEKQELEDEIDINTGSIKVE------RTKKSKEWNKQGSCLTRNKNEFCMKDTGR 589 Query: 348 ETKT 359 E KT Sbjct: 590 ENKT 593
>gi|1289512 (U53861) slow myosin heavy chain 3 [Coturnix coturnix] >gi|1289514 (U53862) slow myosin heavy chain 3 [Coturnix coturnix] Length = 1931 Score = 31.3 bits (69), Expect = 7.3 Identities = 20/72 (27%), Positives = 36/72 (49%) Query: 156 KDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTIEID 335 K K +++ K ++DV QLIK K +++ K + ED++N H+N +E Sbjct: 1209 KQKLEKEKSELKLELDDVSSNMEQLIKAKANLE-------KMCRSTEDQMNEHRNKLE-- 1259 Query: 336 DTKEETKTNIKT 371 + T T++ T Sbjct: 1260 -ESQRTVTDLST 1270
>gi|3874633|emb|CAA92287| (Z68159) C33D9.6 [Caenorhabditis elegans] Length = 790 Score = 30.9 bits (68), Expect = 9.6 Identities = 15/61 (24%), Positives = 33/61 (53%) Query: 147 NDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTI 326 ND + E+ K+K K++E+ + + +K+KE+ L+ T ++ + + E + N + Sbjct: 578 NDQIEMIFENNKLKTKKLEENYRNAKDQLKLKEAHHLKLTQRIEDLEKKLAEKDERLNYL 637 Query: 327 E 329 E Sbjct: 638 E 638
>gi|127774|sp|P08799|MYS2_DICDI MYOSIN II HEAVY CHAIN, NON MUSCLE >gi|84128|pir||A26655 myosin heavy chain - slime mold (Dictyostelium discoideum) >gi|167835 (M14628) myosin heavy chain [Dictyostelium discoideum] Length = 2116 Score = 30.9 bits (68), Expect = 9.6 Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 8/147 (5%) Query: 78 RKYVEDEKSEVISKL---RIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKES 248 RK V E E+ ++L R + E K E ++K++ +ED + +L+K K + Sbjct: 1645 RKQVWQEVDELRAQLDSERAALNASEKKIKSLVAEVDEVKEQ-LEDEILAKDKLVKAKRA 1703 Query: 249 IDLRKTSEVKRINNEED-----EINTHKNTIEIDDTKEETKTNIKTSDLTLXXXXXXXXX 413 +++ ++ EED E + + T E++D K++ ++ + L Sbjct: 1704 LEVELEEVRDQLEEEEDSRSELEDSKRRLTTEVEDIKKKYDAEVE-QNTKLDEAKKKLTD 1762 Query: 414 XXXXXXXTFKDIKYKIEDEEYLRKILFKIFSDNLA 518 +D K K+ + E +K L D LA Sbjct: 1763 DVDTLKKQLEDEKKKLNESERAKKRLESENEDFLA 1797
>gi|3649767|emb|CAB11116| (Z98547) predicted using hexExon; MAL3P3.15 (PFC0405c), Hypothetical protein, len: 609 aa [Plasmodium falciparum] Length = 608 Score = 30.9 bits (68), Expect = 9.6 Identities = 28/98 (28%), Positives = 48/98 (48%) Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESID 254 KRK E EK ++I+KL I+ +E + + + + +KKK+I + K+ KIK I Sbjct: 144 KRKEFE-EKKKLINKLTNILN-VEKEKGNYYFLPKCLKKKKISKLKKIIILEKKIKNDIY 201 Query: 255 LRKTSEVKRINNEEDEINTHKNTIEIDDTKEETKTNIK 368 + + IN+ IN H I + + + K +K Sbjct: 202 QELLKQKENINS----INDHHTGIYLQLIQNKRKWILK 235
>gi|2501586|sp|Q94480|V136_DICDI VEG136 PROTEIN >gi|1513300 (U66527) ORFveg136; similar to Saccharomyces cerevisiae chromosome VII reading frame ORF YGL211w encoded by EMBL Accession Number Z72733 [Dictyostelium discoideum] Length = 357 Score = 30.9 bits (68), Expect = 9.6 Identities = 19/58 (32%), Positives = 32/58 (54%), Gaps = 1/58 (1%) Query: 204 DVLK-LSFQLIKIKESIDLRKTSEVKRINNEEDEINTHKNTIEIDDTKEETKTNIKTSD 377 D+LK L+ L K+K SI+L++ + NN N + NT++++ T T T S+ Sbjct: 303 DLLKNLNSGLAKVKLSINLKRGKD----NNNNSNNNDNNNTLKLESTSAATTTTTTVSN 357
>gi|3041708|sp|P13540|MYSB_MESAU MYOSIN HEAVY CHAIN, CARDIAC MUSCLE BETA ISOFORM >gi|2119308|pir||I48153 beta-myosin heavy chain - golden hamster >gi|402372 (L12104) beta-myosin heavy chain [Mesocricetus auratus] >gi|1581130|prf||2116354A beta myosin:SUBUNIT=heavy chain [Mesocricetus auratus] Length = 1934 Score = 30.9 bits (68), Expect = 9.6 Identities = 21/98 (21%), Positives = 53/98 (53%), Gaps = 3/98 (3%) Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQLIKIKES 248 K++ +EDE SE+ + + L KDK + K+K + + + ++ +L K K++ Sbjct: 938 KKRKLEDECSELKRDIDDLELTLAKVEKDKHATENKVKNLTEEMAGLDEIIAKLTKEKKA 997 Query: 249 IDLRKTSEVKRINNEEDEINT-HKNTIEIDDTKEETKTNIK 368 + + + EED++NT K+ ++++ ++ + +++ Sbjct: 998 LQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDDLEGSLE 1038
>gi|2314701|gb|AAD08561| (AE000650) type III restriction enzyme R protein (res) [Helicobacter pylori 26695] Length = 967 Score = 30.9 bits (68), Expect = 9.6 Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 6/100 (6%) Query: 81 KYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK---KRIEDV-LKLSFQLIKIKES 248 +++ ++V + + + LEN +++KF E +K ++ +R+E++ L++ +Q IK K S Sbjct: 739 EFISALSNKVKLSFKSVAKVLENIDENKFNEIKKNEQEGLRRLEELFLEIIYQNIKDKIS 798 Query: 249 IDLRKTSEVKRINNEEDEINTHKNTIE--IDDTKEETKTNIKTSDL 380 +R+T+ +K N + D K I +D + K IK S + Sbjct: 799 YQMRETT-IK--NRKNDAFYDEKGEIREFLDGSLGADKYEIKNSSV 841
>gi|2501243|sp|Q00313|TOP1_CANAL DNA TOPOISOMERASE I >gi|1465731 (U40454) topoisomerase type I [Candida albicans] Length = 778 Score = 30.9 bits (68), Expect = 9.6 Identities = 20/75 (26%), Positives = 37/75 (48%), Gaps = 3/75 (4%) Query: 144 ENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVK---RINNEEDEINTH 314 E+D D +K +KKR+E + + +K+ + R +VK ++ E N Sbjct: 28 EDDEDDDIPLAKKSRKKRVESDYEEDEDEVPLKKLSNGRAKKQVKTETKVKKEPKSANKS 87 Query: 315 KNTIEIDDTKEETKTNIK 368 K+T + D ++ KT +K Sbjct: 88 KSTSKKDTKVKKEKTTVK 105
>gi|482393|pir||A45669 neurofilament triplet M protein - rat >gi|205688 (M18628) NF-M protein [Rattus norvegicus] Length = 845 Score = 30.9 bits (68), Expect = 9.6 Identities = 23/72 (31%), Positives = 35/72 (47%) Query: 87 VEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKT 266 VEDEKSE+ L +I E L K+ E + ++K E +K + + KE + K Sbjct: 462 VEDEKSEMEDALTVIAEELAASAKE---EKEEAEEKEEEPEVKSPVKSPEAKEEEEGEKE 518 Query: 267 SEVKRINNEEDE 302 E + EE+E Sbjct: 519 EEEEGQEEEEEE 530
>gi|476355|pir||A46762 myosin alpha heavy chain, cardiac muscle - human >gi|219524|dbj|BAA00791| (D00943) cardiac alpha-myosin heavy chain [Homo sapiens] Length = 1939 Score = 30.9 bits (68), Expect = 9.6 Identities = 31/150 (20%), Positives = 72/150 (47%), Gaps = 7/150 (4%) Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQLIKIKES 248 K++ +EDE SE+ + + L K+K + K+K + + + ++ +L K K++ Sbjct: 941 KKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKA 1000 Query: 249 IDLRKTSEVKRINNEEDEINT-HKNTIEIDDTKEETKTNI---KTSDLTLXXXXXXXXXX 416 + + + EED++NT K+ ++++ ++ + ++ K + L Sbjct: 1001 LQEAHQQALDDLQAEEDKVNTLSKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGD 1060 Query: 417 XXXXXXTFKDIKY-KIEDEEYLRKILFKIFSDNLAVK 524 + D++ K++ EE L+K F I N ++ Sbjct: 1061 LKLTQESIMDLENDKLQLEEKLKKKEFDINQQNSKIE 1097
>gi|3915779|sp|P13539|MYSA_MESAU MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHA ISOFORM >gi|2119307|pir||I48175 alpha-cardiac myosin heavy chain gene - golden hamster >gi|402374 (L15351) alpha-cardiac myosin heavy chain gene [Mesocricetus auratus] Length = 1939 Score = 30.9 bits (68), Expect = 9.6 Identities = 31/150 (20%), Positives = 72/150 (47%), Gaps = 7/150 (4%) Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQLIKIKES 248 K++ +EDE SE+ + + L K+K + K+K + + + ++ +L K K++ Sbjct: 941 KKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKA 1000 Query: 249 IDLRKTSEVKRINNEEDEINT-HKNTIEIDDTKEETKTNI---KTSDLTLXXXXXXXXXX 416 + + + EED++NT K+ ++++ ++ + ++ K + L Sbjct: 1001 LQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGD 1060 Query: 417 XXXXXXTFKDIKY-KIEDEEYLRKILFKIFSDNLAVK 524 + D++ K++ EE L+K F I N ++ Sbjct: 1061 LNVTQESIMDLENDKLQLEEKLKKKEFDISQQNSKIE 1097
>gi|4493946|emb|CAB38982| (AL034556) predicted using hexExon; MAL3P5.20 (PFC0680w), Hypothetical protein, len: 427 aa [Plasmodium falciparum] Length = 426 Score = 30.9 bits (68), Expect = 9.6 Identities = 21/78 (26%), Positives = 40/78 (50%), Gaps = 1/78 (1%) Query: 144 ENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDLRKTSEVKRINNE-EDEINTHKN 320 EN K + E++K+ K+ E+ + +D +K E K + + ED++ K Sbjct: 195 ENKMKSQKEEEKKMDSKKEEE------------KKMDSKKKEEKKMDSKKKEDKMGNQKK 242 Query: 321 TIEIDDTKEETKTNIKTSD 377 +I++ K+E KTN +T + Sbjct: 243 ECKINNQKKERKTNNQTKE 261
>gi|127741|sp|P02563|MYSA_RAT MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHA ISOFORM >gi|92498|pir||S06005 myosin alpha heavy chain, cardiac muscle - rat >gi|56655|emb|CAA34064| (X15938) alpha cardiac myosin heavy chain (AA 1-1938) [Rattus norvegicus] Length = 1938 Score = 30.9 bits (68), Expect = 9.6 Identities = 31/150 (20%), Positives = 72/150 (47%), Gaps = 7/150 (4%) Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQLIKIKES 248 K++ +EDE SE+ + + L K+K + K+K + + + ++ +L K K++ Sbjct: 940 KKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKA 999 Query: 249 IDLRKTSEVKRINNEEDEINT-HKNTIEIDDTKEETKTNI---KTSDLTLXXXXXXXXXX 416 + + + EED++NT K+ ++++ ++ + ++ K + L Sbjct: 1000 LQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGD 1059 Query: 417 XXXXXXTFKDIKY-KIEDEEYLRKILFKIFSDNLAVK 524 + D++ K++ EE L+K F I N ++ Sbjct: 1060 LKLTQESIMDLENDKLQLEEKLKKKEFDISQQNSKIE 1096
>gi|3880432|emb|CAA91398| (Z66521) similar to kinensin-like protein; cDNA EST yk198e10.3 comes from this gene; cDNA EST yk198e10.5 comes from this gene [Caenorhabditis elegans] Length = 605 Score = 30.9 bits (68), Expect = 9.6 Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 2/106 (1%) Query: 45 CAVLDCXXDYKRKYVEDEKSEVISKLRIIIEYLENDNKDKFCE-DRKIKKKRIEDVLKLS 221 CA + D K K + +E +++ KLR LE+DNK+K E DR I++ R KL Sbjct: 195 CADVSRVEDQKVKTLRNELADLKLKLR----QLEDDNKEKDMENDRLIQENRTLKREKL- 249 Query: 222 FQLIKIKESIDLRKTSEVKRINNEEDEINTH-KNTIEIDDTKEETKTN 362 +LI ++ K + ++ +N+E ++ + I + D + + +N Sbjct: 250 -KLINCFKTQMAEKDAIIRELNDEVVDLRGQIRVAIRVRDFERDGSSN 296
>gi|191618 (M76598) alpha cardiac myosin heavy chain [Mus musculus] Length = 1938 Score = 30.9 bits (68), Expect = 9.6 Identities = 31/150 (20%), Positives = 72/150 (47%), Gaps = 7/150 (4%) Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQLIKIKES 248 K++ +EDE SE+ + + L K+K + K+K + + + ++ +L K K++ Sbjct: 941 KKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKA 1000 Query: 249 IDLRKTSEVKRINNEEDEINT-HKNTIEIDDTKEETKTNI---KTSDLTLXXXXXXXXXX 416 + + + EED++NT K+ ++++ ++ + ++ K + L Sbjct: 1001 LQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGD 1060 Query: 417 XXXXXXTFKDIKY-KIEDEEYLRKILFKIFSDNLAVK 524 + D++ K++ EE L+K F I N ++ Sbjct: 1061 LKLTQESIMDLENDKLQLEEKLKKKEFDISQQNSKIE 1097
>gi|3024204|sp|Q02566|MYSA_MOUSE MYOSIN HEAVY CHAIN, CARDIAC MUSCLE ALPHA ISOFORM >gi|2119306|pir||I49464 alpha cardiac myosin heavy chain - mouse >gi|191620 (M76599) alpha cardiac myosin heavy chain [Mus musculus] >gi|191624 (M76601) alpha cardiac myosin heavy chain [Mus musculus] Length = 1938 Score = 30.9 bits (68), Expect = 9.6 Identities = 31/150 (20%), Positives = 72/150 (47%), Gaps = 7/150 (4%) Query: 75 KRKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKK--KRIEDVLKLSFQLIKIKES 248 K++ +EDE SE+ + + L K+K + K+K + + + ++ +L K K++ Sbjct: 941 KKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKA 1000 Query: 249 IDLRKTSEVKRINNEEDEINT-HKNTIEIDDTKEETKTNI---KTSDLTLXXXXXXXXXX 416 + + + EED++NT K+ ++++ ++ + ++ K + L Sbjct: 1001 LQEAHQQALDDLQAEEDKVNTLTKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGD 1060 Query: 417 XXXXXXTFKDIKY-KIEDEEYLRKILFKIFSDNLAVK 524 + D++ K++ EE L+K F I N ++ Sbjct: 1061 LKLTQESIMDLENDKLQLEEKLKKKEFDISQQNSKIE 1097
>gi|416720|sp|P32985|BPS2_DESAM BPS2 PROTEIN >gi|99246|pir||S22195 bps2 protein - Desulfurolobus ambivalens >gi|40782|emb|CAA45528| (X64202) bps2 [Acidianus ambivalens] Length = 582 Score = 30.9 bits (68), Expect = 9.6 Identities = 26/82 (31%), Positives = 52/82 (62%), Gaps = 9/82 (10%) Query: 90 EDEKSEVISKLRIIIEYLENDNKDKFCEDR-KIKKKRIEDVLKLSFQL---IKIKESI-- 251 E E +V++K I + N+NK + +++ ++KK+ +ED+ +L IK KES+ Sbjct: 181 EKESDKVLNKTTQTIS-ITNENKLRDIKEKIEVKKRELEDLQNRIARLDQEIKNKESLAS 239 Query: 252 -DLRKTSE--VKRINNEEDEINTHKNTIEID 335 ++R++ E ++ IN + +I +N EI+ Sbjct: 240 PEIRQSYERQLQEINAQLQKITAQRNEAEIE 270
>gi|542637|pir||S39599 class I histocompatibility antigen - African clawed frog Length = 328 Score = 30.9 bits (68), Expect = 9.6 Identities = 23/82 (28%), Positives = 38/82 (46%) Query: 78 RKYVEDEKSEVISKLRIIIEYLENDNKDKFCEDRKIKKKRIEDVLKLSFQLIKIKESIDL 257 ++Y+E+E I L++ + + ND + K KI E +KL + Sbjct: 173 KEYIENE---CIEHLKLYLPIISNDLEKKVIPKLKISSSESESGVKLHCWVYGFYP---- 225 Query: 258 RKTSEVKRINNEEDEINTHKNT 323 + EVK I NE DEI++ + T Sbjct: 226 -RDVEVKWIKNERDEIDSEEAT 246 Database: Non-redundant GenBank CDS translations+PDB+SwissProt+SPupdate+PIR Posted date: Apr 17, 1999 5:33 AM Number of letters in database: 113,023,754 Number of sequences in database: 369,800 Lambda K H 0.318 0.135 0.00 Gapped Lambda K H 0.270 0.0470 4.94e-324 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 79596621 Number of Sequences: 369800 Number of extensions: 1224041 Number of successful extensions: 5938 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 60 Number of HSP's that attempted gapping in prelim test: 5865 Number of HSP's gapped (non-prelim): 110 length of query: 239 length of database: 113,023,754 effective HSP length: 53 effective length of query: 185 effective length of database: 93424354 effective search space: 17283505490 effective search space used: 17283505490 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (21.7 bits) S2: 68 (30.9 bits)