BLASTX 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 13VII12F
         (832 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           369,800 sequences; 113,023,754 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|2827552|emb|CAA16560| (AL021635) predicted protein [Arabidops...    49  1e-05
gi|3873666|emb|CAA93457| (Z69634) cDNA EST EMBL:C11678 comes fro...    41  0.004
gi|1176580|sp|P42836|YN66_YEAST HYPOTHETICAL 39.2 KD PROTEIN IN ...    41  0.010
gi|1255324 (U51999) C43H6.7 gene product [Caenorhabditis elegans]      37  0.012
gi|2132817|pir||S61981 probable membrane protein YOL003c - yeast...    41  0.013
gi|3860313|emb|CAA10124| (AJ012683) hypothetical protein [Cicer ...    40  0.018
gi|3219912|sp|O14345|YB3F_SCHPO HYPOTHETICAL 38.1 KD PROTEIN C2F...    40  0.023
gi|3845261 (AE001414) metal binding protein (DHHC domain) [Plasm...    39  0.030
gi|3874398|emb|CAB03897| (Z81473) cDNA EST yk435d2.5 comes from ...    39  0.030
gi|3947545|emb|CAB03898| (Z81473) cDNA EST EMBL:D75353 comes fro...    39  0.030
gi|3417417|emb|CAA20305| (AL031261) hypothetical protein [Schizo...    36  0.044
gi|466053|sp|P34679|YO41_CAEEL HYPOTHETICAL 68.7 KD PROTEIN ZK75...    39  0.052
gi|4220527|emb|CAA23000| (AL035356) putative protein [Arabidopsi...    36  0.073
gi|2252856 (AF013294) No definition line found [Arabidopsis thal...    36  0.074
gi|3877900|emb|CAB01873| (Z79600) Similarity with yeast hypothet...    34  0.16
gi|2773183 (AF039720) No definition line found [Caenorhabditis e...    37  0.20
gi|3402718 (AC004261) hypothetical protein [Arabidopsis thaliana]      36  0.26
gi|470362 (U00046) weak similarity to ZK757.1 [Caenorhabditis el...    36  0.26
gi|3881079|emb|CAA21738| (AL032657) cDNA EST yk207f6.5 comes fro...    36  0.45
gi|1077581|pir||S52691 probable membrane protein YDR126w - yeast...    36  0.45
gi|747900|emb|CAA88679| (Z48758) unknown [Saccharomyces cerevisiae]    36  0.45
gi|1175373|sp|Q09701|YA2A_SCHPO HYPOTHETICAL 72.5 KD PROTEIN C2F...    34  1.7
gi|1363741|pir||S59392 probable membrane protein YLR246w - yeast...    34  1.7
gi|2342647 (U90653) DHHC-domain-containing cysteine-rich protein...    33  2.3
gi|3873647|emb|CAA94868| (Z71177) Similarity with 39.2kd yeast p...    33  3.0
gi|1171589|emb|CAA64574| (X95275) frameshift [Plasmodium falcipa...    32  5.1
gi|3875664|emb|CAB05476| (Z83104) predicted using Genefinder [Ca...    32  6.7


>gi|2827552|emb|CAA16560| (AL021635) predicted protein [Arabidopsis thaliana] Length = 820 Score = 49.2 bits (115), Expect = 1e-05 Identities = 18/25 (72%), Positives = 19/25 (76%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYLKM 78 C CN YKPPRSHHCS C +C LKM Sbjct: 642 CRKCNQYKPPRSHHCSVCGRCILKM 666 Score = 20.8 bits (42), Expect = 1e-05 Identities = 7/17 (41%), Positives = 10/17 (58%) Query: 61 ISTCIAFHNYKXFYNFL 11 + C+ +NYK F FL Sbjct: 673 VVNCVGANNYKSFLLFL 689
>gi|3873666|emb|CAA93457| (Z69634) cDNA EST EMBL:C11678 comes from this gene; cDNA EST EMBL:C13926 comes from this gene; cDNA EST yk211g12.3 comes from this gene; cDNA EST yk211g12.5 comes from this gene; cDNA EST yk362e5.3 comes from this gene; cDNA ES... >gi|3878711|emb|CAA92831| (Z68507) cDNA EST EMBL:C11678 comes from this gene; cDNA EST EMBL:C13926 comes from this gene; cDNA EST yk211g12.3 comes from this gene; cDNA EST yk211g12.5 comes from this gene; cDNA EST yk362e5.3 comes from this gene; cDNA ES... Length = 447 Score = 40.6 bits (93), Expect = 0.004 Identities = 15/25 (60%), Positives = 18/25 (72%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYLKM 78 C CN +K PRSHHCS C +C +KM Sbjct: 108 CVPCNGFKVPRSHHCSKCDRCCMKM 132 Score = 20.8 bits (42), Expect = 0.004 Identities = 6/18 (33%), Positives = 11/18 (60%) Query: 61 ISTCIAFHNYKXFYNFLY 8 I+ C+ N++ F FL+ Sbjct: 139 INNCVGHRNHQYFLRFLF 156
>gi|1176580|sp|P42836|YN66_YEAST HYPOTHETICAL 39.2 KD PROTEIN IN EGT2-KRE1 INTERGENIC REGION >gi|1362346|pir||S55863 probable membrane protein YNL326c - yeast (Saccharomyces cerevisiae) >gi|633660|emb|CAA86372| (Z46259) N0325 [Saccharomyces cerevisiae] >gi|1302443|emb|CAA96258| (Z71602) ORF YNL326c [Saccharomyces cerevisiae] Length = 336 Score = 41.0 bits (94), Expect = 0.010 Identities = 15/25 (60%), Positives = 17/25 (68%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYLKM 78 C VC+ +KP R HHCS C C LKM Sbjct: 106 CQVCHVWKPDRCHHCSSCDVCILKM 130
>gi|1255324 (U51999) C43H6.7 gene product [Caenorhabditis elegans] Length = 306 Score = 37.1 bits (84), Expect = 0.012 Identities = 13/25 (52%), Positives = 16/25 (64%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYLKM 78 C+ CN +K +HHCS C KC L M Sbjct: 105 CSKCNYWKSDNAHHCSVCEKCVLGM 129 Score = 22.7 bits (47), Expect = 0.012 Identities = 6/17 (35%), Positives = 12/17 (70%) Query: 61 ISTCIAFHNYKXFYNFL 11 I+ C+ HN++ F+ F+ Sbjct: 136 INQCVGLHNHRHFFLFI 152
>gi|2132817|pir||S61981 probable membrane protein YOL003c - yeast (Saccharomyces cerevisiae) >gi|1150993 (U43491) hypothetical protein UNE378 [Saccharomyces cerevisiae] >gi|1419765|emb|CAA99002| (Z74745) ORF YOL003c [Saccharomyces cerevisiae] Length = 378 Score = 40.6 bits (93), Expect = 0.013 Identities = 14/25 (56%), Positives = 16/25 (64%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYLKM 78 C C +YKP RSHHC C +C L M Sbjct: 80 CKKCQSYKPERSHHCKTCNQCVLMM 104
>gi|3860313|emb|CAA10124| (AJ012683) hypothetical protein [Cicer arietinum] Length = 93 Score = 40.2 bits (92), Expect = 0.018 Identities = 14/22 (63%), Positives = 16/22 (72%) Query: 143 CNTYKPPRSHHCSFCRKCYLKM 78 C KPPR HHCS C++C LKM Sbjct: 2 CQNGKPPRCHHCSICQRCVLKM 23
>gi|3219912|sp|O14345|YB3F_SCHPO HYPOTHETICAL 38.1 KD PROTEIN C2F12.15C IN CHROMOSOME II >gi|2239244|emb|CAB10162| (Z97211) hypothetical protein [Schizosaccharomyces pombe] Length = 329 Score = 39.9 bits (91), Expect = 0.023 Identities = 15/25 (60%), Positives = 16/25 (64%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYLKM 78 C C YK RSHHCS C KC L+M Sbjct: 99 CEKCQEYKCDRSHHCSQCNKCILRM 123
>gi|3845261 (AE001414) metal binding protein (DHHC domain) [Plasmodium falciparum] Length = 101 Score = 39.5 bits (90), Expect = 0.030 Identities = 15/25 (60%), Positives = 16/25 (64%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYLKM 78 C CN K RSHHCS C KC +KM Sbjct: 38 CKKCNLLKIKRSHHCSVCDKCIMKM 62
>gi|3874398|emb|CAB03897| (Z81473) cDNA EST yk435d2.5 comes from this gene; cDNA EST yk232f11.3 comes from this gene; cDNA EST yk232f11.5 comes from this gene; cDNA EST yk265e1.5 comes from this gene; cDNA EST yk435d2.3 comes from this gene [Caenorhabdi... Length = 302 Score = 39.5 bits (90), Expect = 0.030 Identities = 12/25 (48%), Positives = 18/25 (72%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYLKM 78 C C++ +PPR+HHC C++C KM Sbjct: 115 CTRCDSLRPPRAHHCRVCKRCVRKM 139
>gi|3947545|emb|CAB03898| (Z81473) cDNA EST EMBL:D75353 comes from this gene; cDNA EST EMBL:D72468 comes from this gene [Caenorhabditis elegans] Length = 240 Score = 39.5 bits (90), Expect = 0.030 Identities = 12/25 (48%), Positives = 18/25 (72%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYLKM 78 C C++ +PPR+HHC C++C KM Sbjct: 53 CTRCDSLRPPRAHHCRVCKRCVRKM 77
>gi|3417417|emb|CAA20305| (AL031261) hypothetical protein [Schizosaccharomyces pombe] Length = 350 Score = 36.0 bits (81), Expect = 0.044 Identities = 17/58 (29%), Positives = 23/58 (39%) Query: 263 YK*ISPYSIR*NRGIVEDVNPFVEQEXXXXXXXXXXICNVCNTYKPPRSHHCSFCRKC 90 Y P+S+ I ED V C+ C+ Y+PPR+ HC C C Sbjct: 152 YNPAHPWSV-----IPEDRKVLVGSTRSDSVFVNTVYCHTCHLYRPPRASHCHLCDNC 204 Score = 21.9 bits (45), Expect = 0.044 Identities = 7/17 (41%), Positives = 12/17 (70%) Query: 61 ISTCIAFHNYKXFYNFL 11 ++TCI NY+ ++ FL Sbjct: 215 LNTCIGRRNYRYYFIFL 231
>gi|466053|sp|P34679|YO41_CAEEL HYPOTHETICAL 68.7 KD PROTEIN ZK757.1 IN CHROMOSOME III >gi|482217|pir||S41011 hypothetical protein ZK757.1 - Caenorhabditis elegans >gi|3881771|emb|CAA82387| (Z29121) ZK757.1 [Caenorhabditis elegans] Length = 589 Score = 38.7 bits (88), Expect = 0.052 Identities = 14/24 (58%), Positives = 16/24 (66%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYLK 81 C+ C KP RSHHCS C +C LK Sbjct: 440 CDKCCCIKPDRSHHCSMCEQCVLK 463
>gi|4220527|emb|CAA23000| (AL035356) putative protein [Arabidopsis thaliana] Length = 374 Score = 36.0 bits (81), Expect = 0.073 Identities = 11/21 (52%), Positives = 13/21 (61%) Query: 152 CNVCNTYKPPRSHHCSFCRKC 90 C+ C Y+PPR HCS C C Sbjct: 138 CDTCMLYRPPRCSHCSICNNC 158 Score = 21.2 bits (43), Expect = 0.073 Identities = 6/17 (35%), Positives = 10/17 (58%) Query: 61 ISTCIAFHNYKXFYNFL 11 + CI NY+ F+ F+ Sbjct: 169 VGQCIGLRNYRYFFMFV 185
>gi|2252856 (AF013294) No definition line found [Arabidopsis thaliana] Length = 262 Score = 35.6 bits (80), Expect = 0.074 Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 10/25 (40%) Query: 152 CNVCNTYKPPRSHHCS----------FCRKCYLKM 78 C C KPPR HHCS C++C LKM Sbjct: 48 CTKCRNVKPPRCHHCSVCKAKSDLFILCQRCVLKM 82 Score = 21.6 bits (44), Expect = 0.074 Identities = 8/18 (44%), Positives = 10/18 (55%) Query: 61 ISTCIAFHNYKXFYNFLY 8 I C+ NYK F FL+ Sbjct: 89 IVNCVGARNYKFFLLFLF 106
>gi|3877900|emb|CAB01873| (Z79600) Similarity with yeast hypothetical protein C2F7.10 (Swiss Prot accession number Q09701) [Caenorhabditis elegans] Length = 239 Score = 34.4 bits (77), Expect = 0.16 Identities = 22/90 (24%), Positives = 33/90 (36%) Query: 347 YIIFDFPFYSFVYYDILHAYPLY*R*KYYK*ISPYSIR*NRGIVEDVNPFVEQEXXXXXX 168 + +F F ++YY ++ YYK R + VNP + Sbjct: 3 FFVFRFVLLIYIYYSVVF--------HYYK---------ARTLTPVVNPGTPSDSF---- 41 Query: 167 XXXXICNVCNTYKPPRSHHCSFCRKCYLKM 78 C CN +K P + HC C KC +M Sbjct: 42 -----CIKCNNWKGPSTSHCKACDKCIYRM 66 Score = 21.6 bits (44), Expect = 0.16 Identities = 7/18 (38%), Positives = 10/18 (54%) Query: 61 ISTCIAFHNYKXFYNFLY 8 I C+ HN F+ FL+ Sbjct: 73 IGQCVGAHNQSHFFLFLF 90
>gi|2773183 (AF039720) No definition line found [Caenorhabditis elegans] Length = 885 Score = 36.7 bits (83), Expect = 0.20 Identities = 12/25 (48%), Positives = 16/25 (64%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYLKM 78 C C + KP R+HHCS C +C +M Sbjct: 86 CQKCASIKPDRAHHCSVCERCIRRM 110
>gi|3402718 (AC004261) hypothetical protein [Arabidopsis thaliana] Length = 340 Score = 36.4 bits (82), Expect = 0.26 Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 152 CNVCNTYKPPRSHHCSFCRKC 90 C+ C Y+PPR+ HCS C C Sbjct: 166 CDTCLLYRPPRASHCSICNNC 186
>gi|470362 (U00046) weak similarity to ZK757.1 [Caenorhabditis elegans] Length = 210 Score = 36.4 bits (82), Expect = 0.26 Identities = 13/25 (52%), Positives = 15/25 (60%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYLKM 78 C +CN KPPR HHC C C +M Sbjct: 84 CQLCNYRKPPRWHHCRRCNLCVHRM 108
>gi|3881079|emb|CAA21738| (AL032657) cDNA EST yk207f6.5 comes from this gene; cDNA EST yk201f11.5 comes from this gene; cDNA EST yk207f6.3 comes from this gene [Caenorhabditis elegans] Length = 368 Score = 35.6 bits (80), Expect = 0.45 Identities = 11/23 (47%), Positives = 13/23 (55%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYL 84 C C Y+PPR HC+ C C L Sbjct: 166 CTTCRLYRPPRCSHCAICDNCVL 188
>gi|1077581|pir||S52691 probable membrane protein YDR126w - yeast (Saccharomyces cerevisiae) Length = 336 Score = 35.6 bits (80), Expect = 0.45 Identities = 12/23 (52%), Positives = 14/23 (60%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYL 84 C+ C KP RS HCS C +C L Sbjct: 136 CSTCRIVKPARSKHCSICNRCVL 158
>gi|747900|emb|CAA88679| (Z48758) unknown [Saccharomyces cerevisiae] Length = 264 Score = 35.6 bits (80), Expect = 0.45 Identities = 12/23 (52%), Positives = 14/23 (60%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYL 84 C+ C KP RS HCS C +C L Sbjct: 136 CSTCRIVKPARSKHCSICNRCVL 158
>gi|1175373|sp|Q09701|YA2A_SCHPO HYPOTHETICAL 72.5 KD PROTEIN C2F7.10 IN CHROMOSOME I >gi|2130379|pir||S58154 hypothetical protein SPAC2F7.10 - fission yeast (Schizosaccharomyces pombe) >gi|1052793|emb|CAA90497| (Z50142) unknown [Schizosaccharomyces pombe] Length = 642 Score = 33.6 bits (75), Expect = 1.7 Identities = 11/21 (52%), Positives = 14/21 (66%) Query: 152 CNVCNTYKPPRSHHCSFCRKC 90 C C KPPRS+HC C++C Sbjct: 402 CLKCFQVKPPRSYHCGACKRC 422
>gi|1363741|pir||S59392 probable membrane protein YLR246w - yeast (Saccharomyces cerevisiae) >gi|662337 (U20865) Ylr246wp [Saccharomyces cerevisiae] Length = 359 Score = 33.6 bits (75), Expect = 1.7 Identities = 11/23 (47%), Positives = 14/23 (60%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYL 84 C C ++PPRS HCS C C + Sbjct: 175 CPSCRIWRPPRSSHCSTCNVCVM 197
>gi|2342647 (U90653) DHHC-domain-containing cysteine-rich protein [Homo sapiens] Length = 217 Score = 33.2 bits (74), Expect = 2.3 Identities = 12/21 (57%), Positives = 13/21 (61%) Query: 152 CNVCNTYKPPRSHHCSFCRKC 90 CN+CN RS HCS C KC Sbjct: 136 CNLCNVDVSARSKHCSACNKC 156
>gi|3873647|emb|CAA94868| (Z71177) Similarity with 39.2kd yeast protein (Swiss Prot accession number P42836) [Caenorhabditis elegans] Length = 600 Score = 32.8 bits (73), Expect = 3.0 Identities = 12/24 (50%), Positives = 14/24 (58%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYLK 81 C C KP R+ HCS C KC +K Sbjct: 405 CYECGHIKPDRARHCSSCGKCCIK 428
>gi|1171589|emb|CAA64574| (X95275) frameshift [Plasmodium falciparum] Length = 960 Score = 32.1 bits (71), Expect = 5.1 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%) Query: 738 NHFILYTNLPINI*HIKYFYLLFYIYDSKTFFIKNIDSKGSIKXHIYIYFK*NIRYFFK* 559 N +ILY I ++ Y+++ FY +K + N ++K ++ + YF Y++K Sbjct: 453 NKWILYN---IYTYYLYYYHIKFYNLYNKGIILNNNNNKYNVIYFLINYFNLFSNYYYKI 509 Query: 558 YIIFHISTNHNVCF----FIFSNYNPTCLKEILF 469 Y + N N F FI N+N + LF Sbjct: 510 YNNNYNFINSNYYFKKMNFILKNFNNIQILNKLF 543
>gi|3875664|emb|CAB05476| (Z83104) predicted using Genefinder [Caenorhabditis elegans] Length = 295 Score = 31.7 bits (70), Expect = 6.7 Identities = 10/24 (41%), Positives = 15/24 (61%) Query: 152 CNVCNTYKPPRSHHCSFCRKCYLK 81 C+ C++ P R+HHC C C L+ Sbjct: 105 CHSCHSMSPLRAHHCPVCDVCILR 128 Database: Non-redundant GenBank CDS translations+PDB+SwissProt+SPupdate+PIR Posted date: Apr 17, 1999 5:33 AM Number of letters in database: 113,023,754 Number of sequences in database: 369,800 Lambda K H 0.318 0.135 0.00 Gapped Lambda K H 0.270 0.0470 4.94e-324 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 127978513 Number of Sequences: 369800 Number of extensions: 2235923 Number of successful extensions: 4572 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 4507 Number of HSP's gapped (non-prelim): 66 length of query: 277 length of database: 113023754 effective HSP length: 54 effective length of query: 222 effective length of database: 93054554 effective search space: 20658110988 effective search space used: 20658110988 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (21.7 bits) S2: 69 (31.3 bits)