BLASTX 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 13VII-7F
         (750 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           369,800 sequences; 113,023,754 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|3912980|sp|O50821|ADEC_BORBU PROBABLE ADENINE DEAMINASE (ADEN...    34  1.2
gi|1706513|sp|P52025|DPOL_METVO DNA POLYMERASE >gi|495654 (L3336...    34  1.2
gi|2842603|sp|Q58815|YE20_METJA HYPOTHETICAL PROTEIN MJ1420 >gi|...    33  2.0


>gi|3912980|sp|O50821|ADEC_BORBU PROBABLE ADENINE DEAMINASE (ADENASE) (ADENINE AMINASE) >gi|2690131 (AE000788) adenine deaminase (adeC) [Borrelia burgdorferi] Length = 548 Score = 34.0 bits (76), Expect = 1.2 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 12/84 (14%) Query: 126 NKDYVPGKXISAD------------INNVSDSSEELDSHLISEKDENENKKECVLYNINX 269 NK Y+ GK + D INN + S + + S K++ +C+ I Sbjct: 320 NKTYINGKLVFNDGISLIPLINEIPINNFNCSKKSISDFKFSTKNKMIPVIKCISNQIIT 379 Query: 270 *K*STLIELL*NILIPKYPLNILKNILVLSILKRWK 377 K T+I+ N+L P + NI ++IL ++I+ R+K Sbjct: 380 HK--TMIDS--NLLAPDFQSNIAEDILKIAIINRYK 411
>gi|1706513|sp|P52025|DPOL_METVO DNA POLYMERASE >gi|495654 (L33366) DNA polymerase [Methanococcus voltae] Length = 824 Score = 34.0 bits (76), Expect = 1.2 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 5/76 (6%) Query: 36 IKIIIEYFKKFTNKYSECYKQVYKEFIINRNKDYVPGKXISADINNVSDSSEEL-----D 200 +KII EYFK+F Y E + ++I ++D VP S D N + +S EL D Sbjct: 126 VKIIREYFKEFGKSY-EFDIPFLRRYMI--DQDIVPSAKYSED-NKIDNSIPELNCIAFD 181 Query: 201 SHLISEKDENENKKECVLYNI 263 L +K+ N K ++ N+ Sbjct: 182 MELYCKKEPNAKKDPIIMVNL 202
>gi|2842603|sp|Q58815|YE20_METJA HYPOTHETICAL PROTEIN MJ1420 >gi|2127939|pir||C64477 glutamine--fructose-6-phosphate transaminase (isomerizing) (EC 2.6.1.16) (intein-containing) - Methanococcus jannaschii >gi|1592069 (U67582) glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (glmS) [Methanococcus jannaschii] Length = 1102 Score = 33.2 bits (74), Expect = 2.0 Identities = 16/53 (30%), Positives = 27/53 (50%) Query: 528 EAAKIIENEFNEYKATLTKRLAYIKKVMDKDNTVKLIEKTXSIXTFNSIDSXI 686 E K++ + +EY+ + K YIK+V+DK T+K I + + I I Sbjct: 919 EYGKLLGRDMSEYEKEIDKIPNYIKEVLDKKETIKEIANNLKVNNYIFISKGI 971 Database: Non-redundant GenBank CDS translations+PDB+SwissProt+SPupdate+PIR Posted date: Apr 17, 1999 5:33 AM Number of letters in database: 113,023,754 Number of sequences in database: 369,800 Lambda K H 0.318 0.135 0.00 Gapped Lambda K H 0.270 0.0470 4.94e-324 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100252057 Number of Sequences: 369800 Number of extensions: 1470339 Number of successful extensions: 4750 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 4749 Number of HSP's gapped (non-prelim): 3 length of query: 250 length of database: 113023754 effective HSP length: 53 effective length of query: 196 effective length of database: 93424354 effective search space: 18311173384 effective search space used: 18311173384 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (21.7 bits) S2: 68 (30.9 bits)