BLASTX 2.0.8 [Jan-05-1999]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 11VII-26F
         (487 letters)

Database: Non-redundant GenBank CDS
translations+PDB+SwissProt+SPupdate+PIR
           368,476 sequences; 112,640,273 total letters

Searching...................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gi|1352911|sp|P47147|YJ80_YEAST HYPOTHETICAL 80.2 KD PROTEIN IN ...    32  3.3


>gi|1352911|sp|P47147|YJ80_YEAST HYPOTHETICAL 80.2 KD PROTEIN IN CPA2-NNF1 INTERGENIC REGION >gi|1084628|pir||S57131 hypothetical protein YJR110w - yeast (Saccharomyces cerevisiae) >gi|1015824|emb|CAA89640| (Z49610) ORF YJR110w [Saccharomyces cerevisiae] Length = 688 Score = 31.7 bits (70), Expect = 3.3 Identities = 16/49 (32%), Positives = 28/49 (56%) Query: 66 KTGIITLNKNFFIVSDLFNNNFSYNKSNTKFLRYFYSQLSYFFCIYKIL 212 +T +I L++ +S FN NF NK + KF+ + Q + C+Y++L Sbjct: 492 ETNLINLSR----ISKKFNENFKLNKKSLKFVSPVFQQ--FLDCVYQLL 534 Database: Non-redundant GenBank CDS translations+PDB+SwissProt+SPupdate+PIR Posted date: Apr 12, 1999 12:54 PM Number of letters in database: 112,640,273 Number of sequences in database: 368,476 Lambda K H 0.318 0.135 0.00 Gapped Lambda K H 0.270 0.0470 4.94e-324 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74869975 Number of Sequences: 368476 Number of extensions: 1289088 Number of successful extensions: 2586 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 0 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 2585 Number of HSP's gapped (non-prelim): 2 length of query: 162 length of database: 112640273 effective HSP length: 52 effective length of query: 109 effective length of database: 93479521 effective search space: 10189267789 effective search space used: 10189267789 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 41 (21.7 bits) S2: 66 (30.1 bits)