Advances In Genome Technology and Bioinformatics

 

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Course Schedule - Week 3

Note: Schedule is still being finalized and is subject to change
Monday, 10/17/2005
9:00 Bill Pearson Protein Sequence Comparison and Protein Evolution Candle House 104-105
2:00 Bill Pearson Protein Sequence Comparison and Protein Evolution (Continued) Computer Lab
7:00
Student Presentations
Preliminary cDNA library QC by group/organism
Results of BLASTX searches with cDNA reads
Cyanobacterial fosmid subcloning results
Definitions of cloning vectors
Alternate protocol for fosmid subcloning
Candle House 104-105
 
Tuesday, 10/18/2005
9:00 Owen White Genome Annotation Candle House 104-105
1:30 Owen White Genome Annotation Lab
Lab Materials
Computer Lab
7:00 Owen White Genome Annotation Lab
Lab Materials
Computer Lab
 
Wednesday, 10/19/2005
9:00 Neil Hall Comparative Genomics in Parasites
Suggested Reading List
Comparative Genomics of Malaria Parasites
Candle House 104-105
10:30 Neil Hall Artemis and ACT, Tools for Genome Analysis and Annotation
Artemis
Candle House 104-105
2:00 Neil Hall Artemis and ACT Workshop Computer Lab
7:00
Student Presentations
Candle House 104-105
 
Thursday, 10/20/2005
9:00 Jeremy Selengut The Comprehensive Microbial Resource (Part I) Candle House 104-105
10:30 Jeremy Selengut The Comprehensive Microbial Resource (Part II) Candle House 104-105
1:30 Jeremy Selengut The Comprehensive Microbial Resource (LAB) Computer Lab
4:00 Jeremy Selengut The Genome Properties Project Candle House 104-105
7:00 Course Banquet Phusion Grill, Woods Hole
 
Friday, 10/21/2005
8:30 Phil Neal / Sue Huse Perl (Continued)
Introduction to Perl Programming
Computer Lab
9:30 Marco Punta/Claudia Bertonati Protein Annotation
Suggested Reading
Theory and Practice 1
Protein Function Prediction from Structure
Protein Function Prediction Theory and Practice
Candle House 104/105
2:00 Marco Punta/Claudia Bertonati Protein Annotation
References and Suggested Reading Protocols
Computer Lab
 
Saturday, 10/22/2005
Free Day
Sunday, 10/23/2005
Free Day

 

[ Week 1 ][ Week 2 ][ Week 3 ][ Week 4 ][ Selected Reading ]
[ Faculty List ]
[ Class Group Pictures ]
[ Class Pictures Slideshow ]
[ Class Pictures Download (440.2 MB!!!) ]
[ Class Home ]